Sgr027978 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr027978
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00153056: 2093095 .. 2094342 (-)
RNA-Seq Expression	Sgr027978
Synteny	Sgr027978

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATTACCGGCCATCTAAGGCCTAAGGCCTCTGTAGAGAATTCATCAGATGACTTCAATCAGTCGGGTGACGAATTGAGAGATACTTGGCAACATGGTATACAGAAAAAGGCAAAGTTCTGCTGGGATTGTTGGGAAGAGAGATATTTAATTGTGGATTTTGAATTGGTTTAAATGGTTCGGAGGAAACCTGTCGGCTAATTTTATGTGTGCATCCTCATGATGCTCAGCTTTTGAAGCCTACTCTCTGCGCCGATCCCGAGCAGTGTCGGAGTATGTTATTGTCTTGACAATCTTAAAGTTAATTAATTGAAGATAAGAGCAAAAGCATACAGAATAATGAAATGGTTGCACAGCATCTGCAGACAACTGTTCTGAAGGGATCCGTTCCTTTGACTTAAGTGGATCCTTTTGGGTCGTAGCATACCGAGAAAGGTGAGCGTGCTATTTGAGACTTCTTTTCATGAAGTTCGGCCACTTAGATTTTTTTTTCCTCATAATATTGTGTATGCATGTTTAGGAATCAAATGGTGGCATCTGGATGTTCTTTCATGAGAACTTGAAAGCTACGGGCTGGAATGGGAATTGAATTGGGTGCATGTGGTCAGTGGAATTACTGACACCAATTGCCGTGTAAGTTGGAGGGTGGCTCGCTGGTAATGCTGTTTGATGATTAAACCCTCGTGGATATGGAGATTTGACTCTCTGGGGTGCTGGCGGAGGTAATTCACATGTAAAAGATGCTAAAAACATTGTTTTGGACAATAAATGCTTAAAGATGACATTTGACAGGCCAGTAAGAAGGTGAAGGGTTGCAATCTTGTGTTTTCTCGACCTTTTTCTTGAGGAGATGTACTTTTCTCAGCACTTCAGCTTGAATATGCTTCAAGGGAGCTAAAATTATATGGGCTACGGCAGCTGGGAATAGAAAAAATTGTACAGAAACTAATGGGGAGCACGGGTTGTGTTTGAGGCCGTCAAAATTTTGAATGGCATTAATGCCAAATTGACTTGTACATACCTCTTCATTTGAAATTATAGTAATTCTTTTGTTGCAGCTCTCTCTTGTTCTACCCAATTTTTAACATTTAATATTGTATGAGTTTGTGCAGTGTATATATGTTATTCTTGAACAGGAATAACATGCCACATGGCACTGAGGTGAGGTCTTTAAGAAGTTGCAAATTTCTTGGCCAAGAACAATGGAGCAGCGTGGCAAACTCTATTGCCAAACACGGAGATTAA

mRNA sequence

ATGGAAATTACCGGCCATCTAAGGCCTAAGGCCTCTGTAGAGAATTCATCAGATGACTTCAATCAGTCGGGTGACGAATTGAGAGATACTTGGCAACATGGTATACAGAAAAAGGCAAAGTTCTGCTGGGATTGTTGGGAAGAGAGATATTTAATTGTGGATTTTGAATTGCTTTTGAAGCCTACTCTCTGCGCCGATCCCGAGCAGTGTCGGACATCTGCAGACAACTGTTCTGAAGGGATCCGTTCCTTTGACTTAAGTGGATCCTTTTGGGTCGTAGCATACCGAGAAAGCTACGGGCTGGAATGGGAATTGAATTGGGTGCATGTGGTCAGTGGAATTACTGACACCAATTGCCGTGTAAGTTGGAGGGTGGCTCGCTGGAATAACATGCCACATGGCACTGAGGTGAGGTCTTTAAGAAGTTGCAAATTTCTTGGCCAAGAACAATGGAGCAGCGTGGCAAACTCTATTGCCAAACACGGAGATTAA

Coding sequence (CDS)

ATGGAAATTACCGGCCATCTAAGGCCTAAGGCCTCTGTAGAGAATTCATCAGATGACTTCAATCAGTCGGGTGACGAATTGAGAGATACTTGGCAACATGGTATACAGAAAAAGGCAAAGTTCTGCTGGGATTGTTGGGAAGAGAGATATTTAATTGTGGATTTTGAATTGCTTTTGAAGCCTACTCTCTGCGCCGATCCCGAGCAGTGTCGGACATCTGCAGACAACTGTTCTGAAGGGATCCGTTCCTTTGACTTAAGTGGATCCTTTTGGGTCGTAGCATACCGAGAAAGCTACGGGCTGGAATGGGAATTGAATTGGGTGCATGTGGTCAGTGGAATTACTGACACCAATTGCCGTGTAAGTTGGAGGGTGGCTCGCTGGAATAACATGCCACATGGCACTGAGGTGAGGTCTTTAAGAAGTTGCAAATTTCTTGGCCAAGAACAATGGAGCAGCGTGGCAAACTCTATTGCCAAACACGGAGATTAA

Protein sequence

MEITGHLRPKASVENSSDDFNQSGDELRDTWQHGIQKKAKFCWDCWEERYLIVDFELLLKPTLCADPEQCRTSADNCSEGIRSFDLSGSFWVVAYRESYGLEWELNWVHVVSGITDTNCRVSWRVARWNNMPHGTEVRSLRSCKFLGQEQWSSVANSIAKHGD

Homology

[Close]

BLAST of Sgr027978 vs. NCBI nr
Match: XP_022142121.1 (uncharacterized ATP-dependent helicase C29A10.10c-like isoform X2 [Momordica charantia])

HSP 1 Score: 55.8 bits (133), Expect = 3.9e-04
Identity = 26/35 (74.29%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 5    GHLRP-KASVENSSDDFNQSGDELRDTWQHGIQKK 39
            G+ RP KA+VENSSDDF+QSGD+LRDTWQ+GI K+
Sbjct: 1328 GNYRPSKAAVENSSDDFDQSGDKLRDTWQYGIPKR 1362

[Close]

BLAST of Sgr027978 vs. NCBI nr
Match: XP_022142129.1 (uncharacterized ATP-dependent helicase C29A10.10c-like isoform X3 [Momordica charantia])

HSP 1 Score: 55.8 bits (133), Expect = 3.9e-04
Identity = 26/35 (74.29%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 5    GHLRP-KASVENSSDDFNQSGDELRDTWQHGIQKK 39
            G+ RP KA+VENSSDDF+QSGD+LRDTWQ+GI K+
Sbjct: 1281 GNYRPSKAAVENSSDDFDQSGDKLRDTWQYGIPKR 1315

[Close]

BLAST of Sgr027978 vs. NCBI nr
Match: XP_022142100.1 (uncharacterized ATP-dependent helicase C29A10.10c-like isoform X1 [Momordica charantia] >XP_022142109.1 uncharacterized ATP-dependent helicase C29A10.10c-like isoform X1 [Momordica charantia])

HSP 1 Score: 55.8 bits (133), Expect = 3.9e-04
Identity = 26/35 (74.29%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 5    GHLRP-KASVENSSDDFNQSGDELRDTWQHGIQKK 39
            G+ RP KA+VENSSDDF+QSGD+LRDTWQ+GI K+
Sbjct: 1329 GNYRPSKAAVENSSDDFDQSGDKLRDTWQYGIPKR 1363

[Close]

BLAST of Sgr027978 vs. ExPASy TrEMBL
Match: A0A6J1CKM8 (uncharacterized ATP-dependent helicase C29A10.10c-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012310 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.9e-04
Identity = 26/35 (74.29%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 5    GHLRP-KASVENSSDDFNQSGDELRDTWQHGIQKK 39
            G+ RP KA+VENSSDDF+QSGD+LRDTWQ+GI K+
Sbjct: 1329 GNYRPSKAAVENSSDDFDQSGDKLRDTWQYGIPKR 1363

[Close]

BLAST of Sgr027978 vs. ExPASy TrEMBL
Match: A0A6J1CKP7 (uncharacterized ATP-dependent helicase C29A10.10c-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111012310 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.9e-04
Identity = 26/35 (74.29%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 5    GHLRP-KASVENSSDDFNQSGDELRDTWQHGIQKK 39
            G+ RP KA+VENSSDDF+QSGD+LRDTWQ+GI K+
Sbjct: 1281 GNYRPSKAAVENSSDDFDQSGDKLRDTWQYGIPKR 1315

[Close]

BLAST of Sgr027978 vs. ExPASy TrEMBL
Match: A0A6J1CL98 (uncharacterized ATP-dependent helicase C29A10.10c-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012310 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.9e-04
Identity = 26/35 (74.29%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 5    GHLRP-KASVENSSDDFNQSGDELRDTWQHGIQKK 39
            G+ RP KA+VENSSDDF+QSGD+LRDTWQ+GI K+
Sbjct: 1328 GNYRPSKAAVENSSDDFDQSGDKLRDTWQYGIPKR 1362

[Close]

BLAST of Sgr027978 vs. ExPASy TrEMBL
Match: A0A5A7VEA2 (Putative ATP-dependent helicase C29A10.10c-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001250 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 7.2e-04
Identity = 24/35 (68.57%), Postives = 33/35 (94.29%), Query Frame = 0


Query: 5    GHLRP-KASVENSSDDFNQSGDELRDTWQHGIQKK 39
            G+ RP KA+VENSS+DF+QSG++LRDTWQ+G+QK+
Sbjct: 1327 GNYRPSKAAVENSSEDFDQSGEKLRDTWQYGMQKR 1361

[Close]

BLAST of Sgr027978 vs. ExPASy TrEMBL
Match: A0A5C7H7A0 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022019 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 7.2e-04
Identity = 25/35 (71.43%), Postives = 27/35 (77.14%), Query Frame = 0


Query: 5    GHLRP-KASVENSSDDFNQSGDELRDTWQHGIQKK 39
            GH RP K  +ENS DDF+QSGD  RD WQHGIQKK
Sbjct: 1331 GHYRPFKPPLENSLDDFDQSGDRYRDAWQHGIQKK 1365

The following BLAST results are available for this feature:

BLAST of Sgr027978 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142121.1	3.9e-04	74.29	uncharacterized ATP-dependent helicase C29A10.10c-like isoform X2 [Momordica cha...	[more]
XP_022142129.1	3.9e-04	74.29	uncharacterized ATP-dependent helicase C29A10.10c-like isoform X3 [Momordica cha...	[more]
XP_022142100.1	3.9e-04	74.29	uncharacterized ATP-dependent helicase C29A10.10c-like isoform X1 [Momordica cha...	[more]

BLAST of Sgr027978 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr027978 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CKM8	1.9e-04	74.29	uncharacterized ATP-dependent helicase C29A10.10c-like isoform X1 OS=Momordica c...	[more]
A0A6J1CKP7	1.9e-04	74.29	uncharacterized ATP-dependent helicase C29A10.10c-like isoform X3 OS=Momordica c...	[more]
A0A6J1CL98	1.9e-04	74.29	uncharacterized ATP-dependent helicase C29A10.10c-like isoform X2 OS=Momordica c...	[more]
A0A5A7VEA2	7.2e-04	68.57	Putative ATP-dependent helicase C29A10.10c-like OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5C7H7A0	7.2e-04	71.43	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022019 PE=4 SV=1	[more]

BLAST of Sgr027978 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr027978.1	Sgr027978.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004386	helicase activity