Sgr027779 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr027779
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionRNA-binding protein 1-like
Locationtig00153055: 2501018 .. 2501764 (+)
RNA-Seq ExpressionSgr027779
SyntenySgr027779
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAATAATACTTATCAATCCAAGGGGAGAAAGATTTTTGTAGGGGGCTTATCGGCTGATTTGACCGAGGATGAGTTCAAAAAGTACTTTGAAAAGTTTGGTCGGATAACAGATGTAGTTGTGATGCATGATAGCGTAACTAGCCGCCCTAGAGGATTTGGATTTATCACATTTGTTTCAGTGGAATCTGTTGACTCTGTTTTGCAAAATAACTTTCATGAATTGAATGGTAGGCGTGTGGAGGTGAAGAGAGCTGTGCCAAAAAAGGGAAACTGCAATAGCGGCCACACTTCCAACACTAGAACTCGAAGAGGAAAAAGCCCTCCTCTTCCTAACGGGAATGTTTCTCTCTCTTACCCATACTATGGATCAAGCTATGTAGTCTATCCTGGTTATACACCTTTTCCACATTATGGAGGGCTAGGAGCTGATTTGTATGGCCCAAGCCTCTATGGGAGTTGGTATCCCCCCAATGGCTTATATGGCATTGGCCACGAGATTCCTCCCATGGCCTCCGGAGGTGCGGTGTACGGCCCAAATTTTTTTGGTGTTGGGACATATCCTTTTCCTTACATAAATTCTCTAATTCATCCAACATATTCAAGTAAGGGAGGTAGGCTTTTAGATACAGTGGCTGGAAATGGAATTGCTGATACAAGAAGAAATGTTGAGATAAAGCAGCCCAGTGGAAACGTAAGTATGTCGGCTGATGCAGTGCCATTTCAGATTAAAGATAAAGCTTGA

mRNA sequence

ATGGAAAATAATACTTATCAATCCAAGGGGAGAAAGATTTTTGTAGGGGGCTTATCGGCTGATTTGACCGAGGATGAGTTCAAAAAGTACTTTGAAAAGTTTGGTCGGATAACAGATGTAGTTGTGATGCATGATAGCGTAACTAGCCGCCCTAGAGGATTTGGATTTATCACATTTGTTTCAGTGGAATCTGTTGACTCTGTTTTGCAAAATAACTTTCATGAATTGAATGGTAGGCGTGTGGAGGTGAAGAGAGCTGTGCCAAAAAAGGGAAACTGCAATAGCGGCCACACTTCCAACACTAGAACTCGAAGAGGAAAAAGCCCTCCTCTTCCTAACGGGAATGTTTCTCTCTCTTACCCATACTATGGATCAAGCTATGTAGTCTATCCTGGTTATACACCTTTTCCACATTATGGAGGGCTAGGAGCTGATTTGTATGGCCCAAGCCTCTATGGGAGTTGGTATCCCCCCAATGGCTTATATGGCATTGGCCACGAGATTCCTCCCATGGCCTCCGGAGGTGCGGTGTACGGCCCAAATTTTTTTGGTGTTGGGACATATCCTTTTCCTTACATAAATTCTCTAATTCATCCAACATATTCAAGTAAGGGAGGTAGGCTTTTAGATACAGTGGCTGGAAATGGAATTGCTGATACAAGAAGAAATGTTGAGATAAAGCAGCCCAGTGGAAACGTAAGTATGTCGGCTGATGCAGTGCCATTTCAGATTAAAGATAAAGCTTGA

Coding sequence (CDS)

ATGGAAAATAATACTTATCAATCCAAGGGGAGAAAGATTTTTGTAGGGGGCTTATCGGCTGATTTGACCGAGGATGAGTTCAAAAAGTACTTTGAAAAGTTTGGTCGGATAACAGATGTAGTTGTGATGCATGATAGCGTAACTAGCCGCCCTAGAGGATTTGGATTTATCACATTTGTTTCAGTGGAATCTGTTGACTCTGTTTTGCAAAATAACTTTCATGAATTGAATGGTAGGCGTGTGGAGGTGAAGAGAGCTGTGCCAAAAAAGGGAAACTGCAATAGCGGCCACACTTCCAACACTAGAACTCGAAGAGGAAAAAGCCCTCCTCTTCCTAACGGGAATGTTTCTCTCTCTTACCCATACTATGGATCAAGCTATGTAGTCTATCCTGGTTATACACCTTTTCCACATTATGGAGGGCTAGGAGCTGATTTGTATGGCCCAAGCCTCTATGGGAGTTGGTATCCCCCCAATGGCTTATATGGCATTGGCCACGAGATTCCTCCCATGGCCTCCGGAGGTGCGGTGTACGGCCCAAATTTTTTTGGTGTTGGGACATATCCTTTTCCTTACATAAATTCTCTAATTCATCCAACATATTCAAGTAAGGGAGGTAGGCTTTTAGATACAGTGGCTGGAAATGGAATTGCTGATACAAGAAGAAATGTTGAGATAAAGCAGCCCAGTGGAAACGTAAGTATGTCGGCTGATGCAGTGCCATTTCAGATTAAAGATAAAGCTTGA

Protein sequence

MENNTYQSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVDSVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYPYYGSSYVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGPNFFGVGTYPFPYINSLIHPTYSSKGGRLLDTVAGNGIADTRRNVEIKQPSGNVSMSADAVPFQIKDKA
Homology
BLAST of Sgr027779 vs. NCBI nr
Match: XP_038898856.1 (RNA-binding protein 1-like [Benincasa hispida])

HSP 1 Score: 343.6 bits (880), Expect = 1.4e-90
Identity = 180/249 (72.29%), Postives = 195/249 (78.31%), Query Frame = 0

Query: 1   MENNTYQSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFV 60
           MENN  Q +GRKIFVGGLSA+LTEDEFK YFEKFG+ITDVVVMHDSVT+RPRGFGFITF 
Sbjct: 8   MENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFE 67

Query: 61  SVESVDSVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSP-PLPNGNVSLS 120
           SVESVDSVLQ+NFHELNGRRVEVKRA+PKKGN N GH  N RT+ GKSP P  N NV   
Sbjct: 68  SVESVDSVLQSNFHELNGRRVEVKRAIPKKGNYNGGHIPNARTQGGKSPLPNSNRNVPFP 127

Query: 121 YPYYGSSYVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYG 180
           YPYYGSSY VYPG+TPFPHYGG G DLYG  LYG+W+PP+           MAS G  YG
Sbjct: 128 YPYYGSSYPVYPGFTPFPHYGGPGVDLYGSHLYGNWFPPS--------FGNMASEGTWYG 187

Query: 181 PNFFGVGTYPFPYINSLIHPTYSSKGGRLLDTVAGNGIADTRRNVEIKQ-PSGNVSMSAD 240
           PNFFGVG +P PY NSLI P YSSKG  L DT  GNG+ DTRRN EIKQ  +G   MSAD
Sbjct: 188 PNFFGVGIFPPPYRNSLIPPIYSSKG--LSDTGTGNGMVDTRRNGEIKQNTTGKRIMSAD 246

Query: 241 AVPFQIKDK 248
           AVPFQIKD+
Sbjct: 248 AVPFQIKDR 246

BLAST of Sgr027779 vs. NCBI nr
Match: XP_022136959.1 (RNA-binding protein 1-like [Momordica charantia] >XP_022137022.1 RNA-binding protein 1-like [Momordica charantia] >XP_022137089.1 RNA-binding protein 1-like [Momordica charantia])

HSP 1 Score: 300.1 bits (767), Expect = 1.8e-77
Identity = 164/248 (66.13%), Postives = 185/248 (74.60%), Query Frame = 0

Query: 1   MENNTYQSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFV 60
           ME+N  QS+G+KIFVGGL +DLTE+EFK YFEKFG+ITDVVVM DSVT+RPRGFGFITF 
Sbjct: 8   MESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFD 67

Query: 61  SVESVDSVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSY 120
           SVESV+ VLQNNFHELNGRRVEVKRAVPK  NCNS     +  +RGKSP  P  +V L Y
Sbjct: 68  SVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNS-----SNPQRGKSPLSP--HVPLYY 127

Query: 121 PYYGSSYVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGP 180
           P++ S  VVYPGY PFPHY       YG SLYGSW+  NGLYG GHE PP+  G A Y P
Sbjct: 128 PHFSSGPVVYPGYAPFPHY-------YGSSLYGSWH-YNGLYGTGHEAPPLPLGSAWYAP 187

Query: 181 NFFGVGTYPFPYINSLIHPTYSSKGGRLLDTVAGNGIADTRRNVEIKQPSGNVSMSADAV 240
           N FG G +P PYINS+IHP YSSKGGRLLD +AGNG    RRN       GN  MSADAV
Sbjct: 188 NVFGDGMFPSPYINSVIHPVYSSKGGRLLDPMAGNG----RRN-------GN--MSADAV 227

Query: 241 PFQIKDKA 249
           PFQ+ ++A
Sbjct: 248 PFQLNNRA 227

BLAST of Sgr027779 vs. NCBI nr
Match: XP_022982410.1 (RNA-binding protein 1-like [Cucurbita maxima])

HSP 1 Score: 271.9 bits (694), Expect = 5.3e-69
Identity = 151/242 (62.40%), Postives = 169/242 (69.83%), Query Frame = 0

Query: 7   QSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVD 66
           Q +GRKIFVGGLSA+LTED+FK YFEKFGR+TDVVVM DSVT RPRGFGFITF SV+SVD
Sbjct: 10  QFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVD 69

Query: 67  SVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYPYYGSS 126
           SVLQNNFHELNGRRVEVKRA+PKKGN N GH S +        PL   NV  SYPYY   
Sbjct: 70  SVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKS--------PLSESNVLPSYPYYSCG 129

Query: 127 YVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGPNFFGVG 186
           Y VYPG+TPFP YG  G  LYG   YG+W+ P+          PMAS  A YGPNFFG+ 
Sbjct: 130 YTVYPGFTPFPPYGP-GFGLYGSDPYGNWFSPS--------FGPMASPAAWYGPNFFGM- 189

Query: 187 TYPFPYINSLIHPTYSSKGGRLLDTVAGNGIADTRRNVEIKQPSGNVSMSADAVPFQIKD 246
            +P P+ NSL++PTYSS G  L   VAG   AD RR VE        +MSADAVPF  KD
Sbjct: 190 -FPPPHKNSLVYPTYSSNG--LSTPVAGYETADARRKVE-PPTRAQKNMSADAVPFHAKD 229

Query: 247 KA 249
           +A
Sbjct: 250 RA 229

BLAST of Sgr027779 vs. NCBI nr
Match: XP_023524364.1 (RNA-binding protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.8 bits (691), Expect = 1.2e-68
Identity = 153/243 (62.96%), Postives = 170/243 (69.96%), Query Frame = 0

Query: 7   QSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVD 66
           Q +GRKIFVGGLSA+LTED+FK YFEKFGR+TDVVVM DSVT RPRGFGFITF SV+SVD
Sbjct: 10  QFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVD 69

Query: 67  SVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYPYYGSS 126
           SVLQNNFHELNGRRVEVKRA+PKKGN N GH S +        PL   NV  SYPYY   
Sbjct: 70  SVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKS--------PLSESNVLPSYPYYSCG 129

Query: 127 YVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGPNFFGVG 186
           Y VYPG+TPFP YG  G  LYG   YG+W+ P+          PMAS  A Y PNFFG+ 
Sbjct: 130 YTVYPGFTPFPPYGP-GFGLYGSDPYGNWFSPS--------FGPMASPAAWYAPNFFGM- 189

Query: 187 TYPFPYINSLIHPTYSSKGGRLLDTVAGNGIADTRRNVEIKQPS-GNVSMSADAVPFQIK 246
            +P P+ NSL++PTYSS G  L   VAG   AD RR VE   PS    +MSADAVPF  K
Sbjct: 190 -FPPPHKNSLVYPTYSSNG--LSTPVAGYETADGRRKVE--PPSRAQKNMSADAVPFHAK 229

Query: 247 DKA 249
           DKA
Sbjct: 250 DKA 229

BLAST of Sgr027779 vs. NCBI nr
Match: XP_022940975.1 (RNA-binding protein 1-like [Cucurbita moschata])

HSP 1 Score: 269.6 bits (688), Expect = 2.6e-68
Identity = 150/242 (61.98%), Postives = 168/242 (69.42%), Query Frame = 0

Query: 7   QSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVD 66
           Q +GRKIFVGGLSA+LTED+FK YFEKFGR+TDVVVM DSVT RPRGFGFITF SV+SVD
Sbjct: 10  QFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVD 69

Query: 67  SVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYPYYGSS 126
           SVLQNNFHELNGRRVEVKRA+PKKGN N GH S +        PL   NV  SYPYY   
Sbjct: 70  SVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKS--------PLSESNVLPSYPYYSCG 129

Query: 127 YVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGPNFFGVG 186
           Y VYPG+TPFP YG  G  LYG   YG+W+ P+          PMAS  A Y PNFFG+ 
Sbjct: 130 YTVYPGFTPFPPYGP-GFGLYGSDPYGNWFSPS--------FGPMASPAAWYAPNFFGM- 189

Query: 187 TYPFPYINSLIHPTYSSKGGRLLDTVAGNGIADTRRNVEIKQPSGNVSMSADAVPFQIKD 246
            +P P+ NSL++PTYSS G  L   VAG   AD RR V+        +MSADAVPF  KD
Sbjct: 190 -FPPPHKNSLVYPTYSSNG--LSTPVAGYETADARRKVD-PPTRAQKNMSADAVPFHAKD 229

Query: 247 KA 249
           KA
Sbjct: 250 KA 229

BLAST of Sgr027779 vs. ExPASy Swiss-Prot
Match: Q9C652 (RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-28
Identity = 86/218 (39.45%), Postives = 119/218 (54.59%), Query Frame = 0

Query: 1   MENNTYQSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFV 60
           M +N   S+ +KIFVGGLS++ TE+EFK YFE+FGR TDVVVMHD VT+RPRGFGF+T+ 
Sbjct: 110 MSSNGVTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYD 169

Query: 61  SVESVDSVLQNNFHELNGRRVEVKRAVPKKG-NCNSGHTSN---TRTRRGKSPPLPNGN- 120
           S +SV+ V+Q+NFHEL+ +RVEVKRA+PK+G   N+G+  N   + +    +P +P  N 
Sbjct: 170 SEDSVEVVMQSNFHELSDKRVEVKRAIPKEGIQSNNGNAVNIPPSYSSFQATPYVPEQNG 229

Query: 121 --VSLSYPYYGSSYVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLY-GIGHEIPPMA 180
             + L +P     Y        +P+     A +   S       P G Y    H  PP  
Sbjct: 230 YGMVLQFPPPVFGYHHNVQAVQYPYGYQFTAQVANVSWNNPIMQPTGFYCAPPHPTPPPT 289

Query: 181 SG-GAVYGPNFFGVGTYPFPYINSLIHPTYSSKGGRLL 210
           +  G +   N F +        N L  P      G L+
Sbjct: 290 NNLGYIQYMNGFDLSGTNISGYNPLAWPVTGDAAGALI 327

BLAST of Sgr027779 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.9e-25
Identity = 76/184 (41.30%), Postives = 102/184 (55.43%), Query Frame = 0

Query: 8   SKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVDS 67
           +K +KIFVGGL   LT++EF++YFE +G +TDV +M+D  T+RPRGFGF++F S ++VDS
Sbjct: 107 NKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDS 166

Query: 68  VLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYPYYGSSY 127
           VL   FH+L+G++VEVKRA+PK  N   G         G+S     G  S  Y  YG + 
Sbjct: 167 VLHKTFHDLSGKQVEVKRALPKDANPGGG---------GRS---MGGGGSGGYQGYGGNE 226

Query: 128 VVYPGYTPFPHY-----GGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGPNF 187
             Y G      +      G G   YG S YG+ Y  NG  G G+     A GG       
Sbjct: 227 SSYDGRMDSNRFLQHQSVGNGLPSYGSSGYGAGY-GNGSNGAGYG----AYGGYTGSAGG 273

BLAST of Sgr027779 vs. ExPASy Swiss-Prot
Match: O43347 (RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=9606 GN=MSI1 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.9e-19
Identity = 59/147 (40.14%), Postives = 87/147 (59.18%), Query Frame = 0

Query: 8   SKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVDS 67
           ++ +KIFVGGLS + T ++ K+YFE+FG++ D ++M D  T+R RGFGF+TF S + V+ 
Sbjct: 106 TRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK 165

Query: 68  VLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVS-------LSY 127
           V + +FHE+N + VE K+A PK+        S T + RG+S  +P G  +       L Y
Sbjct: 166 VCEIHFHEINNKMVECKKAQPKE------VMSPTGSARGRSRVMPYGMDAFMLGIGMLGY 225

Query: 128 P------YYGSSYV-VYPGYT-PFPHY 140
           P      Y   SY  + PGYT  FP +
Sbjct: 226 PGFQATTYASRSYTGLAPGYTYQFPEF 246

BLAST of Sgr027779 vs. ExPASy Swiss-Prot
Match: Q96DH6 (RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.9e-19
Identity = 56/145 (38.62%), Postives = 83/145 (57.24%), Query Frame = 0

Query: 8   SKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVDS 67
           ++ +KIFVGGLSA+   ++ K+YFE+FG++ D ++M D  T+R RGFGF+TF + + V+ 
Sbjct: 107 TRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK 166

Query: 68  VLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYPYYGSSY 127
           V + +FHE+N + VE K+A PK+     G     R           G   L YP + ++Y
Sbjct: 167 VCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATY 226

Query: 128 -VVYPGYTPFPHY--GGLGADLYGP 150
              YPG+ P   Y   G  A  YGP
Sbjct: 227 GRGYPGFAPSYGYQFPGFPAAAYGP 251

BLAST of Sgr027779 vs. ExPASy Swiss-Prot
Match: Q920Q6 (RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.9e-19
Identity = 56/145 (38.62%), Postives = 83/145 (57.24%), Query Frame = 0

Query: 8   SKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVDS 67
           ++ +KIFVGGLSA+   ++ K+YFE+FG++ D ++M D  T+R RGFGF+TF + + V+ 
Sbjct: 107 TRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK 166

Query: 68  VLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYPYYGSSY 127
           V + +FHE+N + VE K+A PK+     G     R           G   L YP + ++Y
Sbjct: 167 VCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATY 226

Query: 128 -VVYPGYTPFPHY--GGLGADLYGP 150
              YPG+ P   Y   G  A  YGP
Sbjct: 227 GRGYPGFAPSYGYQFPGFPAAAYGP 251

BLAST of Sgr027779 vs. ExPASy TrEMBL
Match: A0A6J1C724 (RNA-binding protein 1-like OS=Momordica charantia OX=3673 GN=LOC111008498 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 8.8e-78
Identity = 164/248 (66.13%), Postives = 185/248 (74.60%), Query Frame = 0

Query: 1   MENNTYQSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFV 60
           ME+N  QS+G+KIFVGGL +DLTE+EFK YFEKFG+ITDVVVM DSVT+RPRGFGFITF 
Sbjct: 8   MESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFD 67

Query: 61  SVESVDSVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSY 120
           SVESV+ VLQNNFHELNGRRVEVKRAVPK  NCNS     +  +RGKSP  P  +V L Y
Sbjct: 68  SVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNS-----SNPQRGKSPLSP--HVPLYY 127

Query: 121 PYYGSSYVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGP 180
           P++ S  VVYPGY PFPHY       YG SLYGSW+  NGLYG GHE PP+  G A Y P
Sbjct: 128 PHFSSGPVVYPGYAPFPHY-------YGSSLYGSWH-YNGLYGTGHEAPPLPLGSAWYAP 187

Query: 181 NFFGVGTYPFPYINSLIHPTYSSKGGRLLDTVAGNGIADTRRNVEIKQPSGNVSMSADAV 240
           N FG G +P PYINS+IHP YSSKGGRLLD +AGNG    RRN       GN  MSADAV
Sbjct: 188 NVFGDGMFPSPYINSVIHPVYSSKGGRLLDPMAGNG----RRN-------GN--MSADAV 227

Query: 241 PFQIKDKA 249
           PFQ+ ++A
Sbjct: 248 PFQLNNRA 227

BLAST of Sgr027779 vs. ExPASy TrEMBL
Match: A0A6J1J2K5 (RNA-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481242 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 2.6e-69
Identity = 151/242 (62.40%), Postives = 169/242 (69.83%), Query Frame = 0

Query: 7   QSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVD 66
           Q +GRKIFVGGLSA+LTED+FK YFEKFGR+TDVVVM DSVT RPRGFGFITF SV+SVD
Sbjct: 10  QFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVD 69

Query: 67  SVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYPYYGSS 126
           SVLQNNFHELNGRRVEVKRA+PKKGN N GH S +        PL   NV  SYPYY   
Sbjct: 70  SVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKS--------PLSESNVLPSYPYYSCG 129

Query: 127 YVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGPNFFGVG 186
           Y VYPG+TPFP YG  G  LYG   YG+W+ P+          PMAS  A YGPNFFG+ 
Sbjct: 130 YTVYPGFTPFPPYGP-GFGLYGSDPYGNWFSPS--------FGPMASPAAWYGPNFFGM- 189

Query: 187 TYPFPYINSLIHPTYSSKGGRLLDTVAGNGIADTRRNVEIKQPSGNVSMSADAVPFQIKD 246
            +P P+ NSL++PTYSS G  L   VAG   AD RR VE        +MSADAVPF  KD
Sbjct: 190 -FPPPHKNSLVYPTYSSNG--LSTPVAGYETADARRKVE-PPTRAQKNMSADAVPFHAKD 229

Query: 247 KA 249
           +A
Sbjct: 250 RA 229

BLAST of Sgr027779 vs. ExPASy TrEMBL
Match: A0A6J1FS87 (RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446397 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.3e-68
Identity = 150/242 (61.98%), Postives = 168/242 (69.42%), Query Frame = 0

Query: 7   QSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVD 66
           Q +GRKIFVGGLSA+LTED+FK YFEKFGR+TDVVVM DSVT RPRGFGFITF SV+SVD
Sbjct: 10  QFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVD 69

Query: 67  SVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYPYYGSS 126
           SVLQNNFHELNGRRVEVKRA+PKKGN N GH S +        PL   NV  SYPYY   
Sbjct: 70  SVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKS--------PLSESNVLPSYPYYSCG 129

Query: 127 YVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGPNFFGVG 186
           Y VYPG+TPFP YG  G  LYG   YG+W+ P+          PMAS  A Y PNFFG+ 
Sbjct: 130 YTVYPGFTPFPPYGP-GFGLYGSDPYGNWFSPS--------FGPMASPAAWYAPNFFGM- 189

Query: 187 TYPFPYINSLIHPTYSSKGGRLLDTVAGNGIADTRRNVEIKQPSGNVSMSADAVPFQIKD 246
            +P P+ NSL++PTYSS G  L   VAG   AD RR V+        +MSADAVPF  KD
Sbjct: 190 -FPPPHKNSLVYPTYSSNG--LSTPVAGYETADARRKVD-PPTRAQKNMSADAVPFHAKD 229

Query: 247 KA 249
           KA
Sbjct: 250 KA 229

BLAST of Sgr027779 vs. ExPASy TrEMBL
Match: A0A0A0L563 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G644730 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 3.1e-67
Identity = 151/249 (60.64%), Postives = 175/249 (70.28%), Query Frame = 0

Query: 1   MENNTYQSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFV 60
           M+NN  Q +GRKIFVGGLSA+LTE+EF+ YFE FG+ITDVVVMHDSVT+RPRGFGF+TF 
Sbjct: 6   MDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFE 65

Query: 61  SVESVDSVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPL-PNGNVSLS 120
           S+ESVDSVLQ NFHELNGRRVEVKRA+PKKGN N  H  N R    KSP L  N NV   
Sbjct: 66  SLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNARA--AKSPLLNGNRNVPFP 125

Query: 121 YPYYGSSYVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYG 180
           YPYYGS Y +YPG+T FPHYG    D YG + YG+W+PP            +AS G  +G
Sbjct: 126 YPYYGSGYPIYPGFTHFPHYGA-AVDSYGSNFYGNWFPPGS--------ANIASDGWWHG 185

Query: 181 PNFFGVGTYPFPYINSLIHPTYSSKGGRLLDTVAGNGIADTRRNVEIKQ-PSGNVSMSAD 240
           PNFF VG  P    NSL+HP   SKG   +   + NG+A+T RN EIKQ  +G   MSAD
Sbjct: 186 PNFFSVGMLPPLCRNSLMHP---SKG---IYIGSRNGMANT-RNGEIKQNTAGKRIMSAD 236

Query: 241 AVPFQIKDK 248
           A PFQIKD+
Sbjct: 246 AAPFQIKDR 236

BLAST of Sgr027779 vs. ExPASy TrEMBL
Match: A0A5N6R9D7 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013735 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.4e-51
Identity = 116/232 (50.00%), Postives = 144/232 (62.07%), Query Frame = 0

Query: 2   ENNTYQSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVS 61
           +N   Q + +KIFVGGLSA LTE+EFK YF++FGR+TDVVVMHDS T RPRGFGFITF S
Sbjct: 108 DNGDNQFRTKKIFVGGLSASLTEEEFKNYFKRFGRVTDVVVMHDSTTHRPRGFGFITFDS 167

Query: 62  VESVDSVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYP 121
            ESV++V+QN+FHELNGR VEVKRAVPK+ N  S    NTR   G+  P        S+P
Sbjct: 168 EESVENVMQNSFHELNGRLVEVKRAVPKEVNNGSDSGFNTRIEGGRGSP-------GSFP 227

Query: 122 YYGSSYVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGPN 181
            Y   Y + PGY PFP + G G  LYG S+Y  WYP  G  G+G  + P+A     YGP 
Sbjct: 228 PYSLRYWILPGYVPFPGFSGGGGSLYGASMYSGWYPSGGSGGVGSVVAPLAPRNPWYGPR 287

Query: 182 FFGVGTYPFPYINSLIHPTY--SSKGGRLLDTVAGNGIADTRRNVEIKQPSG 232
             G G +P P  ++ I+P Y     GG  +   A NGI     + E++  SG
Sbjct: 288 VIGAGAFPLPPGSASIYPAYFTGGVGGIGMSAGAYNGIVG---HSELESESG 329

BLAST of Sgr027779 vs. TAIR 10
Match: AT1G58470.1 (RNA-binding protein 1 )

HSP 1 Score: 128.3 bits (321), Expect = 8.8e-30
Identity = 86/218 (39.45%), Postives = 119/218 (54.59%), Query Frame = 0

Query: 1   MENNTYQSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFV 60
           M +N   S+ +KIFVGGLS++ TE+EFK YFE+FGR TDVVVMHD VT+RPRGFGF+T+ 
Sbjct: 110 MSSNGVTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYD 169

Query: 61  SVESVDSVLQNNFHELNGRRVEVKRAVPKKG-NCNSGHTSN---TRTRRGKSPPLPNGN- 120
           S +SV+ V+Q+NFHEL+ +RVEVKRA+PK+G   N+G+  N   + +    +P +P  N 
Sbjct: 170 SEDSVEVVMQSNFHELSDKRVEVKRAIPKEGIQSNNGNAVNIPPSYSSFQATPYVPEQNG 229

Query: 121 --VSLSYPYYGSSYVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLY-GIGHEIPPMA 180
             + L +P     Y        +P+     A +   S       P G Y    H  PP  
Sbjct: 230 YGMVLQFPPPVFGYHHNVQAVQYPYGYQFTAQVANVSWNNPIMQPTGFYCAPPHPTPPPT 289

Query: 181 SG-GAVYGPNFFGVGTYPFPYINSLIHPTYSSKGGRLL 210
           +  G +   N F +        N L  P      G L+
Sbjct: 290 NNLGYIQYMNGFDLSGTNISGYNPLAWPVTGDAAGALI 327

BLAST of Sgr027779 vs. TAIR 10
Match: AT4G14300.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 116.3 bits (290), Expect = 3.5e-26
Identity = 76/184 (41.30%), Postives = 102/184 (55.43%), Query Frame = 0

Query: 8   SKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVDS 67
           +K +KIFVGGL   LT++EF++YFE +G +TDV +M+D  T+RPRGFGF++F S ++VDS
Sbjct: 107 NKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDS 166

Query: 68  VLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYPYYGSSY 127
           VL   FH+L+G++VEVKRA+PK  N   G         G+S     G  S  Y  YG + 
Sbjct: 167 VLHKTFHDLSGKQVEVKRALPKDANPGGG---------GRS---MGGGGSGGYQGYGGNE 226

Query: 128 VVYPGYTPFPHY-----GGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGPNF 187
             Y G      +      G G   YG S YG+ Y  NG  G G+     A GG       
Sbjct: 227 SSYDGRMDSNRFLQHQSVGNGLPSYGSSGYGAGY-GNGSNGAGYG----AYGGYTGSAGG 273

BLAST of Sgr027779 vs. TAIR 10
Match: AT5G47620.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 115.9 bits (289), Expect = 4.5e-26
Identity = 84/198 (42.42%), Postives = 105/198 (53.03%), Query Frame = 0

Query: 8   SKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVDS 67
           S  +KIFVGGL++ +TE EFKKYF +FG ITDVVVM+D  T RPRGFGFI++ S E+VD 
Sbjct: 103 SNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDK 162

Query: 68  VLQNNFHELNGRRVEVKRAVPK---------KGNCNSGHTSNTRT-----RRGKSPPLPN 127
           VLQ  FHELNG+ VEVK AVPK         + N NS  TS   +      +G SP   +
Sbjct: 163 VLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSPIS 222

Query: 128 GNVSLSYPYYGSSYVVYPGYTPFPHYGGLGADL---------YGPSLYGSW---YPPNGL 180
           G        Y  +     G++PF H  G G +L         YG    G +   + P   
Sbjct: 223 GYGVKPEVRYSPAVGNRGGFSPFGH--GYGIELNFEPNQTQNYGSGSSGGFGRPFSPGYA 282

BLAST of Sgr027779 vs. TAIR 10
Match: AT5G47620.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 115.9 bits (289), Expect = 4.5e-26
Identity = 84/198 (42.42%), Postives = 105/198 (53.03%), Query Frame = 0

Query: 8   SKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVDS 67
           S  +KIFVGGL++ +TE EFKKYF +FG ITDVVVM+D  T RPRGFGFI++ S E+VD 
Sbjct: 103 SNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDK 162

Query: 68  VLQNNFHELNGRRVEVKRAVPK---------KGNCNSGHTSNTRT-----RRGKSPPLPN 127
           VLQ  FHELNG+ VEVK AVPK         + N NS  TS   +      +G SP   +
Sbjct: 163 VLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSPIS 222

Query: 128 GNVSLSYPYYGSSYVVYPGYTPFPHYGGLGADL---------YGPSLYGSW---YPPNGL 180
           G        Y  +     G++PF H  G G +L         YG    G +   + P   
Sbjct: 223 GYGVKPEVRYSPAVGNRGGFSPFGH--GYGIELNFEPNQTQNYGSGSSGGFGRPFSPGYA 282

BLAST of Sgr027779 vs. TAIR 10
Match: AT5G47620.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 115.9 bits (289), Expect = 4.5e-26
Identity = 84/198 (42.42%), Postives = 105/198 (53.03%), Query Frame = 0

Query: 8   SKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVDS 67
           S  +KIFVGGL++ +TE EFKKYF +FG ITDVVVM+D  T RPRGFGFI++ S E+VD 
Sbjct: 43  SNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDK 102

Query: 68  VLQNNFHELNGRRVEVKRAVPK---------KGNCNSGHTSNTRT-----RRGKSPPLPN 127
           VLQ  FHELNG+ VEVK AVPK         + N NS  TS   +      +G SP   +
Sbjct: 103 VLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSPIS 162

Query: 128 GNVSLSYPYYGSSYVVYPGYTPFPHYGGLGADL---------YGPSLYGSW---YPPNGL 180
           G        Y  +     G++PF H  G G +L         YG    G +   + P   
Sbjct: 163 GYGVKPEVRYSPAVGNRGGFSPFGH--GYGIELNFEPNQTQNYGSGSSGGFGRPFSPGYA 222

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038898856.11.4e-9072.29RNA-binding protein 1-like [Benincasa hispida][more]
XP_022136959.11.8e-7766.13RNA-binding protein 1-like [Momordica charantia] >XP_022137022.1 RNA-binding pro... [more]
XP_022982410.15.3e-6962.40RNA-binding protein 1-like [Cucurbita maxima][more]
XP_023524364.11.2e-6862.96RNA-binding protein 1-like [Cucurbita pepo subsp. pepo][more]
XP_022940975.12.6e-6861.98RNA-binding protein 1-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q9C6521.2e-2839.45RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1[more]
Q8W0344.9e-2541.30Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP... [more]
O433478.9e-1940.14RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=9606 GN=MSI1 PE=1 SV=1[more]
Q96DH68.9e-1938.62RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1[more]
Q920Q68.9e-1938.62RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1C7248.8e-7866.13RNA-binding protein 1-like OS=Momordica charantia OX=3673 GN=LOC111008498 PE=4 S... [more]
A0A6J1J2K52.6e-6962.40RNA-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481242 PE=4 SV=1[more]
A0A6J1FS871.3e-6861.98RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446397 PE=4 SV... [more]
A0A0A0L5633.1e-6760.64RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G644730 PE=4 SV... [more]
A0A5N6R9D71.4e-5150.00Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013735 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G58470.18.8e-3039.45RNA-binding protein 1 [more]
AT4G14300.13.5e-2641.30RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G47620.14.5e-2642.42RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G47620.24.5e-2642.42RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G47620.34.5e-2642.42RNA-binding (RRM/RBD/RNP motifs) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 12..84
e-value: 1.1E-24
score: 98.0
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 13..81
e-value: 4.5E-17
score: 61.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 11..88
score: 18.580891
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..114
e-value: 2.0E-27
score: 98.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..112
NoneNo IPR availablePANTHERPTHR48032RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6coord: 3..222
NoneNo IPR availablePANTHERPTHR48032:SF12NUCLEOTIDE-BINDING ALPHA-BETA PLAIT DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 3..222
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 7..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr027779.1Sgr027779.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding