Homology
BLAST of Sgr027779 vs. NCBI nr
Match:
XP_038898856.1 (RNA-binding protein 1-like [Benincasa hispida])
HSP 1 Score: 343.6 bits (880), Expect = 1.4e-90
Identity = 180/249 (72.29%), Postives = 195/249 (78.31%), Query Frame = 0
Query: 1 MENNTYQSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFV 60
MENN Q +GRKIFVGGLSA+LTEDEFK YFEKFG+ITDVVVMHDSVT+RPRGFGFITF
Sbjct: 8 MENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFE 67
Query: 61 SVESVDSVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSP-PLPNGNVSLS 120
SVESVDSVLQ+NFHELNGRRVEVKRA+PKKGN N GH N RT+ GKSP P N NV
Sbjct: 68 SVESVDSVLQSNFHELNGRRVEVKRAIPKKGNYNGGHIPNARTQGGKSPLPNSNRNVPFP 127
Query: 121 YPYYGSSYVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYG 180
YPYYGSSY VYPG+TPFPHYGG G DLYG LYG+W+PP+ MAS G YG
Sbjct: 128 YPYYGSSYPVYPGFTPFPHYGGPGVDLYGSHLYGNWFPPS--------FGNMASEGTWYG 187
Query: 181 PNFFGVGTYPFPYINSLIHPTYSSKGGRLLDTVAGNGIADTRRNVEIKQ-PSGNVSMSAD 240
PNFFGVG +P PY NSLI P YSSKG L DT GNG+ DTRRN EIKQ +G MSAD
Sbjct: 188 PNFFGVGIFPPPYRNSLIPPIYSSKG--LSDTGTGNGMVDTRRNGEIKQNTTGKRIMSAD 246
Query: 241 AVPFQIKDK 248
AVPFQIKD+
Sbjct: 248 AVPFQIKDR 246
BLAST of Sgr027779 vs. NCBI nr
Match:
XP_022136959.1 (RNA-binding protein 1-like [Momordica charantia] >XP_022137022.1 RNA-binding protein 1-like [Momordica charantia] >XP_022137089.1 RNA-binding protein 1-like [Momordica charantia])
HSP 1 Score: 300.1 bits (767), Expect = 1.8e-77
Identity = 164/248 (66.13%), Postives = 185/248 (74.60%), Query Frame = 0
Query: 1 MENNTYQSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFV 60
ME+N QS+G+KIFVGGL +DLTE+EFK YFEKFG+ITDVVVM DSVT+RPRGFGFITF
Sbjct: 8 MESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFD 67
Query: 61 SVESVDSVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSY 120
SVESV+ VLQNNFHELNGRRVEVKRAVPK NCNS + +RGKSP P +V L Y
Sbjct: 68 SVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNS-----SNPQRGKSPLSP--HVPLYY 127
Query: 121 PYYGSSYVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGP 180
P++ S VVYPGY PFPHY YG SLYGSW+ NGLYG GHE PP+ G A Y P
Sbjct: 128 PHFSSGPVVYPGYAPFPHY-------YGSSLYGSWH-YNGLYGTGHEAPPLPLGSAWYAP 187
Query: 181 NFFGVGTYPFPYINSLIHPTYSSKGGRLLDTVAGNGIADTRRNVEIKQPSGNVSMSADAV 240
N FG G +P PYINS+IHP YSSKGGRLLD +AGNG RRN GN MSADAV
Sbjct: 188 NVFGDGMFPSPYINSVIHPVYSSKGGRLLDPMAGNG----RRN-------GN--MSADAV 227
Query: 241 PFQIKDKA 249
PFQ+ ++A
Sbjct: 248 PFQLNNRA 227
BLAST of Sgr027779 vs. NCBI nr
Match:
XP_022982410.1 (RNA-binding protein 1-like [Cucurbita maxima])
HSP 1 Score: 271.9 bits (694), Expect = 5.3e-69
Identity = 151/242 (62.40%), Postives = 169/242 (69.83%), Query Frame = 0
Query: 7 QSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVD 66
Q +GRKIFVGGLSA+LTED+FK YFEKFGR+TDVVVM DSVT RPRGFGFITF SV+SVD
Sbjct: 10 QFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVD 69
Query: 67 SVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYPYYGSS 126
SVLQNNFHELNGRRVEVKRA+PKKGN N GH S + PL NV SYPYY
Sbjct: 70 SVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKS--------PLSESNVLPSYPYYSCG 129
Query: 127 YVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGPNFFGVG 186
Y VYPG+TPFP YG G LYG YG+W+ P+ PMAS A YGPNFFG+
Sbjct: 130 YTVYPGFTPFPPYGP-GFGLYGSDPYGNWFSPS--------FGPMASPAAWYGPNFFGM- 189
Query: 187 TYPFPYINSLIHPTYSSKGGRLLDTVAGNGIADTRRNVEIKQPSGNVSMSADAVPFQIKD 246
+P P+ NSL++PTYSS G L VAG AD RR VE +MSADAVPF KD
Sbjct: 190 -FPPPHKNSLVYPTYSSNG--LSTPVAGYETADARRKVE-PPTRAQKNMSADAVPFHAKD 229
Query: 247 KA 249
+A
Sbjct: 250 RA 229
BLAST of Sgr027779 vs. NCBI nr
Match:
XP_023524364.1 (RNA-binding protein 1-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 270.8 bits (691), Expect = 1.2e-68
Identity = 153/243 (62.96%), Postives = 170/243 (69.96%), Query Frame = 0
Query: 7 QSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVD 66
Q +GRKIFVGGLSA+LTED+FK YFEKFGR+TDVVVM DSVT RPRGFGFITF SV+SVD
Sbjct: 10 QFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVD 69
Query: 67 SVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYPYYGSS 126
SVLQNNFHELNGRRVEVKRA+PKKGN N GH S + PL NV SYPYY
Sbjct: 70 SVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKS--------PLSESNVLPSYPYYSCG 129
Query: 127 YVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGPNFFGVG 186
Y VYPG+TPFP YG G LYG YG+W+ P+ PMAS A Y PNFFG+
Sbjct: 130 YTVYPGFTPFPPYGP-GFGLYGSDPYGNWFSPS--------FGPMASPAAWYAPNFFGM- 189
Query: 187 TYPFPYINSLIHPTYSSKGGRLLDTVAGNGIADTRRNVEIKQPS-GNVSMSADAVPFQIK 246
+P P+ NSL++PTYSS G L VAG AD RR VE PS +MSADAVPF K
Sbjct: 190 -FPPPHKNSLVYPTYSSNG--LSTPVAGYETADGRRKVE--PPSRAQKNMSADAVPFHAK 229
Query: 247 DKA 249
DKA
Sbjct: 250 DKA 229
BLAST of Sgr027779 vs. NCBI nr
Match:
XP_022940975.1 (RNA-binding protein 1-like [Cucurbita moschata])
HSP 1 Score: 269.6 bits (688), Expect = 2.6e-68
Identity = 150/242 (61.98%), Postives = 168/242 (69.42%), Query Frame = 0
Query: 7 QSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVD 66
Q +GRKIFVGGLSA+LTED+FK YFEKFGR+TDVVVM DSVT RPRGFGFITF SV+SVD
Sbjct: 10 QFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVD 69
Query: 67 SVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYPYYGSS 126
SVLQNNFHELNGRRVEVKRA+PKKGN N GH S + PL NV SYPYY
Sbjct: 70 SVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKS--------PLSESNVLPSYPYYSCG 129
Query: 127 YVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGPNFFGVG 186
Y VYPG+TPFP YG G LYG YG+W+ P+ PMAS A Y PNFFG+
Sbjct: 130 YTVYPGFTPFPPYGP-GFGLYGSDPYGNWFSPS--------FGPMASPAAWYAPNFFGM- 189
Query: 187 TYPFPYINSLIHPTYSSKGGRLLDTVAGNGIADTRRNVEIKQPSGNVSMSADAVPFQIKD 246
+P P+ NSL++PTYSS G L VAG AD RR V+ +MSADAVPF KD
Sbjct: 190 -FPPPHKNSLVYPTYSSNG--LSTPVAGYETADARRKVD-PPTRAQKNMSADAVPFHAKD 229
Query: 247 KA 249
KA
Sbjct: 250 KA 229
BLAST of Sgr027779 vs. ExPASy Swiss-Prot
Match:
Q9C652 (RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1)
HSP 1 Score: 128.3 bits (321), Expect = 1.2e-28
Identity = 86/218 (39.45%), Postives = 119/218 (54.59%), Query Frame = 0
Query: 1 MENNTYQSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFV 60
M +N S+ +KIFVGGLS++ TE+EFK YFE+FGR TDVVVMHD VT+RPRGFGF+T+
Sbjct: 110 MSSNGVTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYD 169
Query: 61 SVESVDSVLQNNFHELNGRRVEVKRAVPKKG-NCNSGHTSN---TRTRRGKSPPLPNGN- 120
S +SV+ V+Q+NFHEL+ +RVEVKRA+PK+G N+G+ N + + +P +P N
Sbjct: 170 SEDSVEVVMQSNFHELSDKRVEVKRAIPKEGIQSNNGNAVNIPPSYSSFQATPYVPEQNG 229
Query: 121 --VSLSYPYYGSSYVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLY-GIGHEIPPMA 180
+ L +P Y +P+ A + S P G Y H PP
Sbjct: 230 YGMVLQFPPPVFGYHHNVQAVQYPYGYQFTAQVANVSWNNPIMQPTGFYCAPPHPTPPPT 289
Query: 181 SG-GAVYGPNFFGVGTYPFPYINSLIHPTYSSKGGRLL 210
+ G + N F + N L P G L+
Sbjct: 290 NNLGYIQYMNGFDLSGTNISGYNPLAWPVTGDAAGALI 327
BLAST of Sgr027779 vs. ExPASy Swiss-Prot
Match:
Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)
HSP 1 Score: 116.3 bits (290), Expect = 4.9e-25
Identity = 76/184 (41.30%), Postives = 102/184 (55.43%), Query Frame = 0
Query: 8 SKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVDS 67
+K +KIFVGGL LT++EF++YFE +G +TDV +M+D T+RPRGFGF++F S ++VDS
Sbjct: 107 NKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDS 166
Query: 68 VLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYPYYGSSY 127
VL FH+L+G++VEVKRA+PK N G G+S G S Y YG +
Sbjct: 167 VLHKTFHDLSGKQVEVKRALPKDANPGGG---------GRS---MGGGGSGGYQGYGGNE 226
Query: 128 VVYPGYTPFPHY-----GGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGPNF 187
Y G + G G YG S YG+ Y NG G G+ A GG
Sbjct: 227 SSYDGRMDSNRFLQHQSVGNGLPSYGSSGYGAGY-GNGSNGAGYG----AYGGYTGSAGG 273
BLAST of Sgr027779 vs. ExPASy Swiss-Prot
Match:
O43347 (RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=9606 GN=MSI1 PE=1 SV=1)
HSP 1 Score: 95.5 bits (236), Expect = 8.9e-19
Identity = 59/147 (40.14%), Postives = 87/147 (59.18%), Query Frame = 0
Query: 8 SKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVDS 67
++ +KIFVGGLS + T ++ K+YFE+FG++ D ++M D T+R RGFGF+TF S + V+
Sbjct: 106 TRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK 165
Query: 68 VLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVS-------LSY 127
V + +FHE+N + VE K+A PK+ S T + RG+S +P G + L Y
Sbjct: 166 VCEIHFHEINNKMVECKKAQPKE------VMSPTGSARGRSRVMPYGMDAFMLGIGMLGY 225
Query: 128 P------YYGSSYV-VYPGYT-PFPHY 140
P Y SY + PGYT FP +
Sbjct: 226 PGFQATTYASRSYTGLAPGYTYQFPEF 246
BLAST of Sgr027779 vs. ExPASy Swiss-Prot
Match:
Q96DH6 (RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1)
HSP 1 Score: 95.5 bits (236), Expect = 8.9e-19
Identity = 56/145 (38.62%), Postives = 83/145 (57.24%), Query Frame = 0
Query: 8 SKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVDS 67
++ +KIFVGGLSA+ ++ K+YFE+FG++ D ++M D T+R RGFGF+TF + + V+
Sbjct: 107 TRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK 166
Query: 68 VLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYPYYGSSY 127
V + +FHE+N + VE K+A PK+ G R G L YP + ++Y
Sbjct: 167 VCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATY 226
Query: 128 -VVYPGYTPFPHY--GGLGADLYGP 150
YPG+ P Y G A YGP
Sbjct: 227 GRGYPGFAPSYGYQFPGFPAAAYGP 251
BLAST of Sgr027779 vs. ExPASy Swiss-Prot
Match:
Q920Q6 (RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1)
HSP 1 Score: 95.5 bits (236), Expect = 8.9e-19
Identity = 56/145 (38.62%), Postives = 83/145 (57.24%), Query Frame = 0
Query: 8 SKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVDS 67
++ +KIFVGGLSA+ ++ K+YFE+FG++ D ++M D T+R RGFGF+TF + + V+
Sbjct: 107 TRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK 166
Query: 68 VLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYPYYGSSY 127
V + +FHE+N + VE K+A PK+ G R G L YP + ++Y
Sbjct: 167 VCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATY 226
Query: 128 -VVYPGYTPFPHY--GGLGADLYGP 150
YPG+ P Y G A YGP
Sbjct: 227 GRGYPGFAPSYGYQFPGFPAAAYGP 251
BLAST of Sgr027779 vs. ExPASy TrEMBL
Match:
A0A6J1C724 (RNA-binding protein 1-like OS=Momordica charantia OX=3673 GN=LOC111008498 PE=4 SV=1)
HSP 1 Score: 300.1 bits (767), Expect = 8.8e-78
Identity = 164/248 (66.13%), Postives = 185/248 (74.60%), Query Frame = 0
Query: 1 MENNTYQSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFV 60
ME+N QS+G+KIFVGGL +DLTE+EFK YFEKFG+ITDVVVM DSVT+RPRGFGFITF
Sbjct: 8 MESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFD 67
Query: 61 SVESVDSVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSY 120
SVESV+ VLQNNFHELNGRRVEVKRAVPK NCNS + +RGKSP P +V L Y
Sbjct: 68 SVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNS-----SNPQRGKSPLSP--HVPLYY 127
Query: 121 PYYGSSYVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGP 180
P++ S VVYPGY PFPHY YG SLYGSW+ NGLYG GHE PP+ G A Y P
Sbjct: 128 PHFSSGPVVYPGYAPFPHY-------YGSSLYGSWH-YNGLYGTGHEAPPLPLGSAWYAP 187
Query: 181 NFFGVGTYPFPYINSLIHPTYSSKGGRLLDTVAGNGIADTRRNVEIKQPSGNVSMSADAV 240
N FG G +P PYINS+IHP YSSKGGRLLD +AGNG RRN GN MSADAV
Sbjct: 188 NVFGDGMFPSPYINSVIHPVYSSKGGRLLDPMAGNG----RRN-------GN--MSADAV 227
Query: 241 PFQIKDKA 249
PFQ+ ++A
Sbjct: 248 PFQLNNRA 227
BLAST of Sgr027779 vs. ExPASy TrEMBL
Match:
A0A6J1J2K5 (RNA-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481242 PE=4 SV=1)
HSP 1 Score: 271.9 bits (694), Expect = 2.6e-69
Identity = 151/242 (62.40%), Postives = 169/242 (69.83%), Query Frame = 0
Query: 7 QSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVD 66
Q +GRKIFVGGLSA+LTED+FK YFEKFGR+TDVVVM DSVT RPRGFGFITF SV+SVD
Sbjct: 10 QFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVD 69
Query: 67 SVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYPYYGSS 126
SVLQNNFHELNGRRVEVKRA+PKKGN N GH S + PL NV SYPYY
Sbjct: 70 SVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKS--------PLSESNVLPSYPYYSCG 129
Query: 127 YVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGPNFFGVG 186
Y VYPG+TPFP YG G LYG YG+W+ P+ PMAS A YGPNFFG+
Sbjct: 130 YTVYPGFTPFPPYGP-GFGLYGSDPYGNWFSPS--------FGPMASPAAWYGPNFFGM- 189
Query: 187 TYPFPYINSLIHPTYSSKGGRLLDTVAGNGIADTRRNVEIKQPSGNVSMSADAVPFQIKD 246
+P P+ NSL++PTYSS G L VAG AD RR VE +MSADAVPF KD
Sbjct: 190 -FPPPHKNSLVYPTYSSNG--LSTPVAGYETADARRKVE-PPTRAQKNMSADAVPFHAKD 229
Query: 247 KA 249
+A
Sbjct: 250 RA 229
BLAST of Sgr027779 vs. ExPASy TrEMBL
Match:
A0A6J1FS87 (RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446397 PE=4 SV=1)
HSP 1 Score: 269.6 bits (688), Expect = 1.3e-68
Identity = 150/242 (61.98%), Postives = 168/242 (69.42%), Query Frame = 0
Query: 7 QSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVD 66
Q +GRKIFVGGLSA+LTED+FK YFEKFGR+TDVVVM DSVT RPRGFGFITF SV+SVD
Sbjct: 10 QFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVD 69
Query: 67 SVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYPYYGSS 126
SVLQNNFHELNGRRVEVKRA+PKKGN N GH S + PL NV SYPYY
Sbjct: 70 SVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKS--------PLSESNVLPSYPYYSCG 129
Query: 127 YVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGPNFFGVG 186
Y VYPG+TPFP YG G LYG YG+W+ P+ PMAS A Y PNFFG+
Sbjct: 130 YTVYPGFTPFPPYGP-GFGLYGSDPYGNWFSPS--------FGPMASPAAWYAPNFFGM- 189
Query: 187 TYPFPYINSLIHPTYSSKGGRLLDTVAGNGIADTRRNVEIKQPSGNVSMSADAVPFQIKD 246
+P P+ NSL++PTYSS G L VAG AD RR V+ +MSADAVPF KD
Sbjct: 190 -FPPPHKNSLVYPTYSSNG--LSTPVAGYETADARRKVD-PPTRAQKNMSADAVPFHAKD 229
Query: 247 KA 249
KA
Sbjct: 250 KA 229
BLAST of Sgr027779 vs. ExPASy TrEMBL
Match:
A0A0A0L563 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G644730 PE=4 SV=1)
HSP 1 Score: 265.0 bits (676), Expect = 3.1e-67
Identity = 151/249 (60.64%), Postives = 175/249 (70.28%), Query Frame = 0
Query: 1 MENNTYQSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFV 60
M+NN Q +GRKIFVGGLSA+LTE+EF+ YFE FG+ITDVVVMHDSVT+RPRGFGF+TF
Sbjct: 6 MDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFE 65
Query: 61 SVESVDSVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPL-PNGNVSLS 120
S+ESVDSVLQ NFHELNGRRVEVKRA+PKKGN N H N R KSP L N NV
Sbjct: 66 SLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNARA--AKSPLLNGNRNVPFP 125
Query: 121 YPYYGSSYVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYG 180
YPYYGS Y +YPG+T FPHYG D YG + YG+W+PP +AS G +G
Sbjct: 126 YPYYGSGYPIYPGFTHFPHYGA-AVDSYGSNFYGNWFPPGS--------ANIASDGWWHG 185
Query: 181 PNFFGVGTYPFPYINSLIHPTYSSKGGRLLDTVAGNGIADTRRNVEIKQ-PSGNVSMSAD 240
PNFF VG P NSL+HP SKG + + NG+A+T RN EIKQ +G MSAD
Sbjct: 186 PNFFSVGMLPPLCRNSLMHP---SKG---IYIGSRNGMANT-RNGEIKQNTAGKRIMSAD 236
Query: 241 AVPFQIKDK 248
A PFQIKD+
Sbjct: 246 AAPFQIKDR 236
BLAST of Sgr027779 vs. ExPASy TrEMBL
Match:
A0A5N6R9D7 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013735 PE=4 SV=1)
HSP 1 Score: 213.0 bits (541), Expect = 1.4e-51
Identity = 116/232 (50.00%), Postives = 144/232 (62.07%), Query Frame = 0
Query: 2 ENNTYQSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVS 61
+N Q + +KIFVGGLSA LTE+EFK YF++FGR+TDVVVMHDS T RPRGFGFITF S
Sbjct: 108 DNGDNQFRTKKIFVGGLSASLTEEEFKNYFKRFGRVTDVVVMHDSTTHRPRGFGFITFDS 167
Query: 62 VESVDSVLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYP 121
ESV++V+QN+FHELNGR VEVKRAVPK+ N S NTR G+ P S+P
Sbjct: 168 EESVENVMQNSFHELNGRLVEVKRAVPKEVNNGSDSGFNTRIEGGRGSP-------GSFP 227
Query: 122 YYGSSYVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGPN 181
Y Y + PGY PFP + G G LYG S+Y WYP G G+G + P+A YGP
Sbjct: 228 PYSLRYWILPGYVPFPGFSGGGGSLYGASMYSGWYPSGGSGGVGSVVAPLAPRNPWYGPR 287
Query: 182 FFGVGTYPFPYINSLIHPTY--SSKGGRLLDTVAGNGIADTRRNVEIKQPSG 232
G G +P P ++ I+P Y GG + A NGI + E++ SG
Sbjct: 288 VIGAGAFPLPPGSASIYPAYFTGGVGGIGMSAGAYNGIVG---HSELESESG 329
BLAST of Sgr027779 vs. TAIR 10
Match:
AT1G58470.1 (RNA-binding protein 1 )
HSP 1 Score: 128.3 bits (321), Expect = 8.8e-30
Identity = 86/218 (39.45%), Postives = 119/218 (54.59%), Query Frame = 0
Query: 1 MENNTYQSKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFV 60
M +N S+ +KIFVGGLS++ TE+EFK YFE+FGR TDVVVMHD VT+RPRGFGF+T+
Sbjct: 110 MSSNGVTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYD 169
Query: 61 SVESVDSVLQNNFHELNGRRVEVKRAVPKKG-NCNSGHTSN---TRTRRGKSPPLPNGN- 120
S +SV+ V+Q+NFHEL+ +RVEVKRA+PK+G N+G+ N + + +P +P N
Sbjct: 170 SEDSVEVVMQSNFHELSDKRVEVKRAIPKEGIQSNNGNAVNIPPSYSSFQATPYVPEQNG 229
Query: 121 --VSLSYPYYGSSYVVYPGYTPFPHYGGLGADLYGPSLYGSWYPPNGLY-GIGHEIPPMA 180
+ L +P Y +P+ A + S P G Y H PP
Sbjct: 230 YGMVLQFPPPVFGYHHNVQAVQYPYGYQFTAQVANVSWNNPIMQPTGFYCAPPHPTPPPT 289
Query: 181 SG-GAVYGPNFFGVGTYPFPYINSLIHPTYSSKGGRLL 210
+ G + N F + N L P G L+
Sbjct: 290 NNLGYIQYMNGFDLSGTNISGYNPLAWPVTGDAAGALI 327
BLAST of Sgr027779 vs. TAIR 10
Match:
AT4G14300.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 116.3 bits (290), Expect = 3.5e-26
Identity = 76/184 (41.30%), Postives = 102/184 (55.43%), Query Frame = 0
Query: 8 SKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVDS 67
+K +KIFVGGL LT++EF++YFE +G +TDV +M+D T+RPRGFGF++F S ++VDS
Sbjct: 107 NKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDS 166
Query: 68 VLQNNFHELNGRRVEVKRAVPKKGNCNSGHTSNTRTRRGKSPPLPNGNVSLSYPYYGSSY 127
VL FH+L+G++VEVKRA+PK N G G+S G S Y YG +
Sbjct: 167 VLHKTFHDLSGKQVEVKRALPKDANPGGG---------GRS---MGGGGSGGYQGYGGNE 226
Query: 128 VVYPGYTPFPHY-----GGLGADLYGPSLYGSWYPPNGLYGIGHEIPPMASGGAVYGPNF 187
Y G + G G YG S YG+ Y NG G G+ A GG
Sbjct: 227 SSYDGRMDSNRFLQHQSVGNGLPSYGSSGYGAGY-GNGSNGAGYG----AYGGYTGSAGG 273
BLAST of Sgr027779 vs. TAIR 10
Match:
AT5G47620.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 115.9 bits (289), Expect = 4.5e-26
Identity = 84/198 (42.42%), Postives = 105/198 (53.03%), Query Frame = 0
Query: 8 SKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVDS 67
S +KIFVGGL++ +TE EFKKYF +FG ITDVVVM+D T RPRGFGFI++ S E+VD
Sbjct: 103 SNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDK 162
Query: 68 VLQNNFHELNGRRVEVKRAVPK---------KGNCNSGHTSNTRT-----RRGKSPPLPN 127
VLQ FHELNG+ VEVK AVPK + N NS TS + +G SP +
Sbjct: 163 VLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSPIS 222
Query: 128 GNVSLSYPYYGSSYVVYPGYTPFPHYGGLGADL---------YGPSLYGSW---YPPNGL 180
G Y + G++PF H G G +L YG G + + P
Sbjct: 223 GYGVKPEVRYSPAVGNRGGFSPFGH--GYGIELNFEPNQTQNYGSGSSGGFGRPFSPGYA 282
BLAST of Sgr027779 vs. TAIR 10
Match:
AT5G47620.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 115.9 bits (289), Expect = 4.5e-26
Identity = 84/198 (42.42%), Postives = 105/198 (53.03%), Query Frame = 0
Query: 8 SKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVDS 67
S +KIFVGGL++ +TE EFKKYF +FG ITDVVVM+D T RPRGFGFI++ S E+VD
Sbjct: 103 SNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDK 162
Query: 68 VLQNNFHELNGRRVEVKRAVPK---------KGNCNSGHTSNTRT-----RRGKSPPLPN 127
VLQ FHELNG+ VEVK AVPK + N NS TS + +G SP +
Sbjct: 163 VLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSPIS 222
Query: 128 GNVSLSYPYYGSSYVVYPGYTPFPHYGGLGADL---------YGPSLYGSW---YPPNGL 180
G Y + G++PF H G G +L YG G + + P
Sbjct: 223 GYGVKPEVRYSPAVGNRGGFSPFGH--GYGIELNFEPNQTQNYGSGSSGGFGRPFSPGYA 282
BLAST of Sgr027779 vs. TAIR 10
Match:
AT5G47620.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 115.9 bits (289), Expect = 4.5e-26
Identity = 84/198 (42.42%), Postives = 105/198 (53.03%), Query Frame = 0
Query: 8 SKGRKIFVGGLSADLTEDEFKKYFEKFGRITDVVVMHDSVTSRPRGFGFITFVSVESVDS 67
S +KIFVGGL++ +TE EFKKYF +FG ITDVVVM+D T RPRGFGFI++ S E+VD
Sbjct: 43 SNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDK 102
Query: 68 VLQNNFHELNGRRVEVKRAVPK---------KGNCNSGHTSNTRT-----RRGKSPPLPN 127
VLQ FHELNG+ VEVK AVPK + N NS TS + +G SP +
Sbjct: 103 VLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSPIS 162
Query: 128 GNVSLSYPYYGSSYVVYPGYTPFPHYGGLGADL---------YGPSLYGSW---YPPNGL 180
G Y + G++PF H G G +L YG G + + P
Sbjct: 163 GYGVKPEVRYSPAVGNRGGFSPFGH--GYGIELNFEPNQTQNYGSGSSGGFGRPFSPGYA 222
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9C652 | 1.2e-28 | 39.45 | RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1 | [more] |
Q8W034 | 4.9e-25 | 41.30 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP... | [more] |
O43347 | 8.9e-19 | 40.14 | RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=9606 GN=MSI1 PE=1 SV=1 | [more] |
Q96DH6 | 8.9e-19 | 38.62 | RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1 | [more] |
Q920Q6 | 8.9e-19 | 38.62 | RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1C724 | 8.8e-78 | 66.13 | RNA-binding protein 1-like OS=Momordica charantia OX=3673 GN=LOC111008498 PE=4 S... | [more] |
A0A6J1J2K5 | 2.6e-69 | 62.40 | RNA-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481242 PE=4 SV=1 | [more] |
A0A6J1FS87 | 1.3e-68 | 61.98 | RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446397 PE=4 SV... | [more] |
A0A0A0L563 | 3.1e-67 | 60.64 | RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G644730 PE=4 SV... | [more] |
A0A5N6R9D7 | 1.4e-51 | 50.00 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013735 PE=4 SV=1 | [more] |