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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTTCCGGTGGTGGCGTTGTCTTTCAGCAGAGGCTTCCGCGGCCGGCCAAGGAGAGCCACCATTTTGCAGCCTGAGGATAGCATGGGGAACAGCTTGAACATCTTCAAAAGGCCGCCGCCACCGCCGCTGCTGGATGACTTTGAGCGTTTGGTGGTGGAAGAGGTGTGGCGGAGCAATGAGAGGAAGGCTGAATTGTCCATGAATGGGCTGGAGTGA mRNA sequence ATGGTTCCGGTGGTGGCGTTGTCTTTCAGCAGAGGCTTCCGCGGCCGGCCAAGGAGAGCCACCATTTTGCAGCCTGAGGATAGCATGGGGAACAGCTTGAACATCTTCAAAAGGCCGCCGCCACCGCCGCTGCTGGATGACTTTGAGCGTTTGGTGGTGGAAGAGGTGTGGCGGAGCAATGAGAGGAAGGCTGAATTGTCCATGAATGGGCTGGAGTGA Coding sequence (CDS) ATGGTTCCGGTGGTGGCGTTGTCTTTCAGCAGAGGCTTCCGCGGCCGGCCAAGGAGAGCCACCATTTTGCAGCCTGAGGATAGCATGGGGAACAGCTTGAACATCTTCAAAAGGCCGCCGCCACCGCCGCTGCTGGATGACTTTGAGCGTTTGGTGGTGGAAGAGGTGTGGCGGAGCAATGAGAGGAAGGCTGAATTGTCCATGAATGGGCTGGAGTGA Protein sequence MVPVVALSFSRGFRGRPRRATILQPEDSMGNSLNIFKRPPPPPLLDDFERLVVEEVWRSNERKAELSMNGLE
Homology
BLAST of Sgr027679 vs. NCBI nr
Match: KAG7037822.1 (hypothetical protein SDJN02_01453, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 72.4 bits (176), Expect = 1.8e-09 Identity = 37/56 (66.07%), Postives = 42/56 (75.00%), Query Frame = 0 Query: 1 MVPVVALSFSRGFRGRPRRATILQPEDSMGNSLNIFKRPP-----PPPLLDDFERL 52 MVPVVALSF RGFRGRPRRATIL PE ++GN+LNI + PP PPP + ERL Sbjct: 1 MVPVVALSFKRGFRGRPRRATILYPELNVGNNLNILRSPPLPVLVPPPEEEGLERL 56
BLAST of Sgr027679 vs. NCBI nr
Match: MCI20449.1 (hypothetical protein [Trifolium medium]) HSP 1 Score: 62.0 bits (149), Expect = 2.4e-06 Identity = 36/68 (52.94%), Postives = 42/68 (61.76%), Query Frame = 0 Query: 1 MVPVVALSFSRGFRGRPRRATILQPEDSMGNSLNIFKRPPPPPLLDDFERLVVEEVWRSN 60 +VPVVALSFS GF G P ATILQPE ++G SLNIFK PP LL VWR + Sbjct: 13 IVPVVALSFSIGFLGLPNSATILQPEVNIGKSLNIFKSPPAENLL-----RFSPVVWRRS 72
Query: 61 ERKAELSM 69 + A S+ Sbjct: 73 DAIAGFSI 75
BLAST of Sgr027679 vs. ExPASy TrEMBL
Match: A0A392Q9B1 (Uncharacterized protein OS=Trifolium medium OX=97028 GN=A2U01_0041611 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.2e-06 Identity = 36/68 (52.94%), Postives = 42/68 (61.76%), Query Frame = 0 Query: 1 MVPVVALSFSRGFRGRPRRATILQPEDSMGNSLNIFKRPPPPPLLDDFERLVVEEVWRSN 60 +VPVVALSFS GF G P ATILQPE ++G SLNIFK PP LL VWR + Sbjct: 13 IVPVVALSFSIGFLGLPNSATILQPEVNIGKSLNIFKSPPAENLL-----RFSPVVWRRS 72
Query: 61 ERKAELSM 69 + A S+ Sbjct: 73 DAIAGFSI 75
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7037822.1 | 1.8e-09 | 66.07 | hypothetical protein SDJN02_01453, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
MCI20449.1 | 2.4e-06 | 52.94 | hypothetical protein [Trifolium medium] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A392Q9B1 | 1.2e-06 | 52.94 | Uncharacterized protein OS=Trifolium medium OX=97028 GN=A2U01_0041611 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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