Sgr027502 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr027502
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionLYR motif-containing protein 4
Locationtig00153054: 2096984 .. 2097250 (-)
RNA-Seq ExpressionSgr027502
SyntenySgr027502
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCCCCGTCGAGGTCTGAAATCCTCTCGCTCTTTCGTTCTCTGCTGCGCACGGCGCGTCAATTCCCAGATTACAACATCAGAGAATACACCAAGCGCCGCACCATTGATGCCTTCCGAGAAAATGGGAGCCTTTCCGACCCTTCTTCGATCTCTTCCGCCTTCGTCGGCGGCAAAGCTCAGCTCGAGGTTGCGAAAAGGCAGGCCCTTGTTTACTCTCTTTACGCGCCTAAGGTCAAGAGTATCATGGACGTCAAGCTCTGA

mRNA sequence

ATGGCGGCCCCGTCGAGGTCTGAAATCCTCTCGCTCTTTCGTTCTCTGCTGCGCACGGCGCGTCAATTCCCAGATTACAACATCAGAGAATACACCAAGCGCCGCACCATTGATGCCTTCCGAGAAAATGGGAGCCTTTCCGACCCTTCTTCGATCTCTTCCGCCTTCGTCGGCGGCAAAGCTCAGCTCGAGGTTGCGAAAAGGCAGGCCCTTGTTTACTCTCTTTACGCGCCTAAGGTCAAGAGTATCATGGACGTCAAGCTCTGA

Coding sequence (CDS)

ATGGCGGCCCCGTCGAGGTCTGAAATCCTCTCGCTCTTTCGTTCTCTGCTGCGCACGGCGCGTCAATTCCCAGATTACAACATCAGAGAATACACCAAGCGCCGCACCATTGATGCCTTCCGAGAAAATGGGAGCCTTTCCGACCCTTCTTCGATCTCTTCCGCCTTCGTCGGCGGCAAAGCTCAGCTCGAGGTTGCGAAAAGGCAGGCCCTTGTTTACTCTCTTTACGCGCCTAAGGTCAAGAGTATCATGGACGTCAAGCTCTGA

Protein sequence

MAAPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENGSLSDPSSISSAFVGGKAQLEVAKRQALVYSLYAPKVKSIMDVKL
Homology
BLAST of Sgr027502 vs. NCBI nr
Match: KAG6607477.1 (LYR motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037133.1 LYR motif-containing protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154.8 bits (390), Expect = 3.4e-34
Identity = 81/86 (94.19%), Postives = 83/86 (96.51%), Query Frame = 0

Query: 1  MAAPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENGSLSDPSSISSAFVGGK 60
          MAAPSRSEIL+LFRSLLRTARQFPDYNIREYTKRRTIDAFREN SLSDPSSISS + GGK
Sbjct: 1  MAAPSRSEILTLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDPSSISSVYAGGK 60

Query: 61 AQLEVAKRQALVYSLYAPKVKSIMDV 87
          AQLEVAKRQALVYSLYAPKVKSIMDV
Sbjct: 61 AQLEVAKRQALVYSLYAPKVKSIMDV 86

BLAST of Sgr027502 vs. NCBI nr
Match: XP_022137452.1 (LYR motif-containing protein 4 [Momordica charantia])

HSP 1 Score: 154.1 bits (388), Expect = 5.7e-34
Identity = 82/88 (93.18%), Postives = 83/88 (94.32%), Query Frame = 0

Query: 1  MAAPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENGSLSDPSSISSAFVGGK 60
          MA PSRSEILSLFRSLLRTARQF DYNIREYTKRR IDAFREN SLSDPSSISSA+ GGK
Sbjct: 1  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGK 60

Query: 61 AQLEVAKRQALVYSLYAPKVKSIMDVKL 89
          AQLEVAKRQALVYSLYAPKVKSIMDVKL
Sbjct: 61 AQLEVAKRQALVYSLYAPKVKSIMDVKL 88

BLAST of Sgr027502 vs. NCBI nr
Match: XP_038894896.1 (LYR motif-containing protein 4 [Benincasa hispida])

HSP 1 Score: 153.7 bits (387), Expect = 7.5e-34
Identity = 81/88 (92.05%), Postives = 83/88 (94.32%), Query Frame = 0

Query: 1  MAAPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENGSLSDPSSISSAFVGGK 60
          MA PSRSE+LSLFRSLLRTARQFPDYNIREYTKRRTIDAFREN SLSD SSISSA+ GGK
Sbjct: 1  MATPSRSEVLSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENQSLSDASSISSAYAGGK 60

Query: 61 AQLEVAKRQALVYSLYAPKVKSIMDVKL 89
          AQLEVAKRQALVYSLYAPKVKSIMDV L
Sbjct: 61 AQLEVAKRQALVYSLYAPKVKSIMDVNL 88

BLAST of Sgr027502 vs. NCBI nr
Match: KGN64034.1 (hypothetical protein Csa_014098 [Cucumis sativus])

HSP 1 Score: 142.5 bits (358), Expect = 1.7e-30
Identity = 74/86 (86.05%), Postives = 79/86 (91.86%), Query Frame = 0

Query: 1  MAAPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENGSLSDPSSISSAFVGGK 60
          MA PS SEILSLFRSLLRTARQFPDYNIREY KRRTID+FREN +LSD SSISS + GG+
Sbjct: 1  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGR 60

Query: 61 AQLEVAKRQALVYSLYAPKVKSIMDV 87
          AQLEVAKRQA+VYSLYAPKVKSIMDV
Sbjct: 61 AQLEVAKRQAIVYSLYAPKVKSIMDV 86

BLAST of Sgr027502 vs. NCBI nr
Match: KAF5807263.1 (putative complex 1 LYR protein [Helianthus annuus])

HSP 1 Score: 139.8 bits (351), Expect = 1.1e-29
Identity = 70/87 (80.46%), Postives = 82/87 (94.25%), Query Frame = 0

Query: 1  MAAPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENGSLSDPSSISSAFVGGK 60
          MA PSRSEIL+LFRSLLR+ARQFPDYNIREYTKRRTIDAFR N +LS+PSSI++AF  G+
Sbjct: 1  MATPSRSEILTLFRSLLRSARQFPDYNIREYTKRRTIDAFRHNKTLSEPSSIAAAFSDGQ 60

Query: 61 AQLEVAKRQALVYSLYAPKVKSIMDVK 88
          +QL+VAKRQA+VYSLYAPK+KSIMD+K
Sbjct: 61 SQLQVAKRQAVVYSLYAPKIKSIMDIK 87

BLAST of Sgr027502 vs. ExPASy Swiss-Prot
Match: B5FZA8 (LYR motif-containing protein 4 OS=Taeniopygia guttata OX=59729 GN=LYRM4 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-10
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 0

Query: 1  MAAPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENGSLSDPSSISSAFVGGK 60
          MAA SR+++L L+R+LLR +++F  YN R Y  RR  DAFREN +++D   I       K
Sbjct: 1  MAASSRAQVLRLYRALLRESQRFSSYNYRTYAIRRIRDAFRENKNIADSEKIEELLNKAK 60

Query: 61 AQLEVAKRQALVYSLYA 78
          A LEV +RQ  +  +YA
Sbjct: 61 ANLEVIQRQGTIDHMYA 77

BLAST of Sgr027502 vs. ExPASy Swiss-Prot
Match: Q9HD34 (LYR motif-containing protein 4 OS=Homo sapiens OX=9606 GN=LYRM4 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 6.0e-10
Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 0

Query: 1  MAAPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENGSLSDPSSISSAFVGGK 60
          MAA SR+++LSL+R++LR +++F  YN R Y  RR  DAFREN ++ DP  I +     K
Sbjct: 1  MAASSRAQVLSLYRAMLRESKRFSAYNYRTYAVRRIRDAFRENKNVKDPVEIQTLVNKAK 60

Query: 61 AQLEVAKRQALVYSLYA 78
            L V +RQ  +  LY+
Sbjct: 61 RDLGVIRRQVHIGQLYS 77

BLAST of Sgr027502 vs. ExPASy Swiss-Prot
Match: Q8K215 (LYR motif-containing protein 4 OS=Mus musculus OX=10090 GN=Lyrm4 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.0e-09
Identity = 32/77 (41.56%), Postives = 48/77 (62.34%), Query Frame = 0

Query: 1  MAAPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENGSLSDPSSISSAFVGGK 60
          MAA SR+++L L+R+++R ++ F  YN R Y  RR  DAFREN ++ DP  I +     K
Sbjct: 1  MAASSRAQVLDLYRAMMRESKHFSAYNYRMYAVRRIRDAFRENKNVKDPVEIQALVNKAK 60

Query: 61 AQLEVAKRQALVYSLYA 78
            LE+ +RQ  +  LY+
Sbjct: 61 RDLEIIRRQVHIGQLYS 77

BLAST of Sgr027502 vs. ExPASy Swiss-Prot
Match: Q0VCG0 (LYR motif-containing protein 4 OS=Bos taurus OX=9913 GN=LYRM4 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 6.6e-09
Identity = 31/77 (40.26%), Postives = 48/77 (62.34%), Query Frame = 0

Query: 1  MAAPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENGSLSDPSSISSAFVGGK 60
          MAA SR+++L L+R++LR +++F  YN R Y  RR  DAFREN ++ DP  I +     K
Sbjct: 1  MAASSRAQVLDLYRAMLRESKRFGAYNYRTYAIRRIRDAFRENKNVKDPVEIQALVNKAK 60

Query: 61 AQLEVAKRQALVYSLYA 78
            L + +RQ  +  +Y+
Sbjct: 61 RDLGIIRRQVHIGQMYS 77

BLAST of Sgr027502 vs. ExPASy Swiss-Prot
Match: B5XD90 (LYR motif-containing protein 4B OS=Salmo salar OX=8030 GN=lyrm4b PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-08
Identity = 30/83 (36.14%), Postives = 49/83 (59.04%), Query Frame = 0

Query: 3  APSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENGSLSDPSSISSAFVGGKAQ 62
          A   +++LSL+R L++ + +FP YN R Y  RR  DAFR N S+ DP  +      G+  
Sbjct: 2  AACTAQVLSLYRKLMKESNKFPSYNYRTYALRRVQDAFRANRSVEDPKMVEQLLNQGRDN 61

Query: 63 LEVAKRQALVYSLYAPKVKSIMD 86
          L++ +RQ  +  +Y P  K+I++
Sbjct: 62 LDMIRRQVAIGKMY-PTQKTIVE 83

BLAST of Sgr027502 vs. ExPASy TrEMBL
Match: A0A6J1C8A4 (LYR motif-containing protein 4 OS=Momordica charantia OX=3673 GN=LOC111008892 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.8e-34
Identity = 82/88 (93.18%), Postives = 83/88 (94.32%), Query Frame = 0

Query: 1  MAAPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENGSLSDPSSISSAFVGGK 60
          MA PSRSEILSLFRSLLRTARQF DYNIREYTKRR IDAFREN SLSDPSSISSA+ GGK
Sbjct: 1  MATPSRSEILSLFRSLLRTARQFSDYNIREYTKRRAIDAFRENRSLSDPSSISSAYAGGK 60

Query: 61 AQLEVAKRQALVYSLYAPKVKSIMDVKL 89
          AQLEVAKRQALVYSLYAPKVKSIMDVKL
Sbjct: 61 AQLEVAKRQALVYSLYAPKVKSIMDVKL 88

BLAST of Sgr027502 vs. ExPASy TrEMBL
Match: A0A0A0LST7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039010 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.3e-31
Identity = 74/86 (86.05%), Postives = 79/86 (91.86%), Query Frame = 0

Query: 1  MAAPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENGSLSDPSSISSAFVGGK 60
          MA PS SEILSLFRSLLRTARQFPDYNIREY KRRTID+FREN +LSD SSISS + GG+
Sbjct: 1  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGR 60

Query: 61 AQLEVAKRQALVYSLYAPKVKSIMDV 87
          AQLEVAKRQA+VYSLYAPKVKSIMDV
Sbjct: 61 AQLEVAKRQAIVYSLYAPKVKSIMDV 86

BLAST of Sgr027502 vs. ExPASy TrEMBL
Match: A0A251UU63 (Putative complex 1 LYR protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr05g0157171 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.4e-30
Identity = 70/87 (80.46%), Postives = 82/87 (94.25%), Query Frame = 0

Query: 1  MAAPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENGSLSDPSSISSAFVGGK 60
          MA PSRSEIL+LFRSLLR+ARQFPDYNIREYTKRRTIDAFR N +LS+PSSI++AF  G+
Sbjct: 1  MATPSRSEILTLFRSLLRSARQFPDYNIREYTKRRTIDAFRHNKTLSEPSSIAAAFSDGQ 60

Query: 61 AQLEVAKRQALVYSLYAPKVKSIMDVK 88
          +QL+VAKRQA+VYSLYAPK+KSIMD+K
Sbjct: 61 SQLQVAKRQAVVYSLYAPKIKSIMDIK 87

BLAST of Sgr027502 vs. ExPASy TrEMBL
Match: A0A2J6KBZ0 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_5X22101 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.1e-29
Identity = 67/84 (79.76%), Postives = 81/84 (96.43%), Query Frame = 0

Query: 4  PSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENGSLSDPSSISSAFVGGKAQL 63
          PSR+EI++LFRSLLR+ARQFPDYNIREYTKRRTIDAFR+N +LS+PSSI++AF  GK+QL
Sbjct: 8  PSRTEIIALFRSLLRSARQFPDYNIREYTKRRTIDAFRDNKTLSEPSSIAAAFTDGKSQL 67

Query: 64 EVAKRQALVYSLYAPKVKSIMDVK 88
          +VAKRQA+VYSLYAPK+KSIMD+K
Sbjct: 68 QVAKRQAVVYSLYAPKIKSIMDIK 91

BLAST of Sgr027502 vs. ExPASy TrEMBL
Match: A0A1R3G4H9 (Complex 1 LYR protein OS=Corchorus olitorius OX=93759 GN=COLO4_36893 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 7.8e-29
Identity = 68/87 (78.16%), Postives = 80/87 (91.95%), Query Frame = 0

Query: 1  MAAPSRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENGSLSDPSSISSAFVGGK 60
          +AAP+R+E+L L+RSLLR ARQF DYNIREYTKRRTIDAFR+N +L+DPS +S+AF  GK
Sbjct: 6  LAAPTRTEVLQLYRSLLRVARQFCDYNIREYTKRRTIDAFRDNKNLTDPSQLSAAFSDGK 65

Query: 61 AQLEVAKRQALVYSLYAPKVKSIMDVK 88
          AQLEVAKRQA+VYSLYAPKVKSIMD+K
Sbjct: 66 AQLEVAKRQAVVYSLYAPKVKSIMDIK 92

BLAST of Sgr027502 vs. TAIR 10
Match: AT5G61220.1 (LYR family of Fe/S cluster biogenesis protein )

HSP 1 Score: 100.1 bits (248), Expect = 9.1e-22
Identity = 51/84 (60.71%), Postives = 63/84 (75.00%), Query Frame = 0

Query: 5  SRSEILSLFRSLLRTARQFPDYNIREYTKRRTIDAFRENGSLSDPSSISSAFVGGKAQLE 64
          S SE+LSL R+LLR  RQFPDYNIREY+KRRT+D FR N +L+DPS ++ A+   K QL 
Sbjct: 3  SSSEVLSLCRALLRAGRQFPDYNIREYSKRRTLDGFRMNKNLTDPSKVTEAYAEAKKQLF 62

Query: 65 VAKRQALVYSLYAPKVKSIMDVKL 89
          VA+R   VY  Y PK K+IM+VKL
Sbjct: 63 VAERVLKVYLAYPPKTKNIMEVKL 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6607477.13.4e-3494.19LYR motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia] ... [more]
XP_022137452.15.7e-3493.18LYR motif-containing protein 4 [Momordica charantia][more]
XP_038894896.17.5e-3492.05LYR motif-containing protein 4 [Benincasa hispida][more]
KGN64034.11.7e-3086.05hypothetical protein Csa_014098 [Cucumis sativus][more]
KAF5807263.11.1e-2980.46putative complex 1 LYR protein [Helianthus annuus][more]
Match NameE-valueIdentityDescription
B5FZA81.2e-1045.45LYR motif-containing protein 4 OS=Taeniopygia guttata OX=59729 GN=LYRM4 PE=3 SV=... [more]
Q9HD346.0e-1044.16LYR motif-containing protein 4 OS=Homo sapiens OX=9606 GN=LYRM4 PE=1 SV=1[more]
Q8K2151.0e-0941.56LYR motif-containing protein 4 OS=Mus musculus OX=10090 GN=Lyrm4 PE=1 SV=1[more]
Q0VCG06.6e-0940.26LYR motif-containing protein 4 OS=Bos taurus OX=9913 GN=LYRM4 PE=3 SV=1[more]
B5XD901.1e-0836.14LYR motif-containing protein 4B OS=Salmo salar OX=8030 GN=lyrm4b PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1C8A42.8e-3493.18LYR motif-containing protein 4 OS=Momordica charantia OX=3673 GN=LOC111008892 PE... [more]
A0A0A0LST78.3e-3186.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039010 PE=4 SV=1[more]
A0A251UU635.4e-3080.46Putative complex 1 LYR protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr05g015... [more]
A0A2J6KBZ02.1e-2979.76Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_5X22101 PE=4 SV=1[more]
A0A1R3G4H97.8e-2978.16Complex 1 LYR protein OS=Corchorus olitorius OX=93759 GN=COLO4_36893 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G61220.19.1e-2260.71LYR family of Fe/S cluster biogenesis protein [more]
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 8..64
e-value: 5.1E-18
score: 64.9
NoneNo IPR availablePANTHERPTHR47158OS08G0239000 PROTEINcoord: 1..87
NoneNo IPR availablePANTHERPTHR47158:SF1OS08G0239000 PROTEINcoord: 1..87
NoneNo IPR availableCDDcd20264Complex1_LYR_LYRM4coord: 8..76
e-value: 1.68792E-22
score: 80.2561

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr027502.1Sgr027502.1mRNA