Sgr026982 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr026982
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00153047: 2785655 .. 2785900 (-)
RNA-Seq Expression	Sgr026982
Synteny	Sgr026982

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATGGGGAGGAGAAGATATGAGAGGCTAAGAAGTGAAGAAAATGCAGAAGAAGAAGATGATGAACAGAAGAACAAGAAGAATCCAACAATATTTAGAGGAGGAAGAAGCAATCTTGCAGAGTTATGGAAGAATATGGAAGGCAAGGCAAATTTAGGGCTGCCCTTGAAGAGGTTCATAGCTACTTATGAAGCAATGATGCTTTGCTTTGCCCACAATCTTGTCCTGCCTCAACAATGGTAA

mRNA sequence

ATGGGAATGGGGAGGAGAAGATATGAGAGGCTAAGAAGTGAAGAAAATGCAGAAGAAGAAGATGATGAACAGAAGAACAAGAAGAATCCAACAATATTTAGAGGAGGAAGAAGCAATCTTGCAGAGTTATGGAAGAATATGGAAGGCAAGGCAAATTTAGGGCTGCCCTTGAAGAGGTTCATAGCTACTTATGAAGCAATGATGCTTTGCTTTGCCCACAATCTTGTCCTGCCTCAACAATGGTAA

Coding sequence (CDS)

ATGGGAATGGGGAGGAGAAGATATGAGAGGCTAAGAAGTGAAGAAAATGCAGAAGAAGAAGATGATGAACAGAAGAACAAGAAGAATCCAACAATATTTAGAGGAGGAAGAAGCAATCTTGCAGAGTTATGGAAGAATATGGAAGGCAAGGCAAATTTAGGGCTGCCCTTGAAGAGGTTCATAGCTACTTATGAAGCAATGATGCTTTGCTTTGCCCACAATCTTGTCCTGCCTCAACAATGGTAA

Protein sequence

MGMGRRRYERLRSEENAEEEDDEQKNKKNPTIFRGGRSNLAELWKNMEGKANLGLPLKRFIATYEAMMLCFAHNLVLPQQW

Homology

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BLAST of Sgr026982 vs. NCBI nr
Match: KAG6587665.1 (hypothetical protein SDJN03_16230, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 84.7 bits (208), Expect = 3.9e-13
Identity = 53/91 (58.24%), Postives = 59/91 (64.84%), Query Frame = 0


Query: 1  MGMGRRRYERLRSEENAEEEDDEQKNKKNPTIFRGG--------RSNL-AELWKNMEGKA 60
          MG GRRRYERLR E  + E D+EQ + KN  I  GG        RSN   ELWK MEG +
Sbjct: 1  MGKGRRRYERLRRE--SSEVDEEQNHIKNSAITLGGGGGWKGRRRSNQGVELWKKMEGSS 60

Query: 61 -NLGLPLKRFIATYEAMMLCFAHNLVLPQQW 82
            LG P K FIATYEA+ML FAH LV+PQQW
Sbjct: 61 PKLGHPFKTFIATYEAIMLYFAHKLVMPQQW 89

The following BLAST results are available for this feature:

BLAST of Sgr026982 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6587665.1	3.9e-13	58.24	hypothetical protein SDJN03_16230, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sgr026982 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr026982 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr026982 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr026982.1	Sgr026982.1	mRNA