Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAGCCTCAAACTCGCGAAAATTTAGCCCAAAATCCCTCACTCTCCCCACTCTCCCGCTCTTCCTTCGCCGCCGCCGATCCGGATCCCGCCGACCATCCCCCGGTGCCACCCGCCGCCGTGGCCGTGGCCGATGACGCAGGCAACGAAGATCCCGATTTGACTCGAGAACCTAAACGCCGGAAGCACTGTCCGGTGGCGCTCGAGAATCTCGACGAGTTGACGTCCGCCTCCAATTCCAGCTTCGCTTTCACCTTCGACACCAAATTCTGCGGGTTTGCGGCTGAGGTCACTCCGAAATTCGGATCGTTCAATTCGATGGCACCGGAAATCGAGAAGAAAGAGCAGAGCGAAGTGAGAGTGAGAGGAGACGAAGATCGGAAAGGAGAGACCGTACAGCGAGAAGAAGAGGACGATGAAGAACGAGAAATCGGCGACGCGTTGCGGGAAGCAATTGGAGGAGGTCTGGAATCAGTTGCGGATTGA
mRNA sequence
ATGGCAGAGCCTCAAACTCGCGAAAATTTAGCCCAAAATCCCTCACTCTCCCCACTCTCCCGCTCTTCCTTCGCCGCCGCCGATCCGGATCCCGCCGACCATCCCCCGGTGCCACCCGCCGCCGTGGCCGTGGCCGATGACGCAGGCAACGAAGATCCCGATTTGACTCGAGAACCTAAACGCCGGAAGCACTGTCCGGTGGCGCTCGAGAATCTCGACGAGTTGACGTCCGCCTCCAATTCCAGCTTCGCTTTCACCTTCGACACCAAATTCTGCGGGTTTGCGGCTGAGGTCACTCCGAAATTCGGATCGTTCAATTCGATGGCACCGGAAATCGAGAAGAAAGAGCAGAGCGAAGTGAGAGTGAGAGGAGACGAAGATCGGAAAGGAGAGACCGTACAGCGAGAAGAAGAGGACGATGAAGAACGAGAAATCGGCGACGCGTTGCGGGAAGCAATTGGAGGAGGTCTGGAATCAGTTGCGGATTGA
Coding sequence (CDS)
ATGGCAGAGCCTCAAACTCGCGAAAATTTAGCCCAAAATCCCTCACTCTCCCCACTCTCCCGCTCTTCCTTCGCCGCCGCCGATCCGGATCCCGCCGACCATCCCCCGGTGCCACCCGCCGCCGTGGCCGTGGCCGATGACGCAGGCAACGAAGATCCCGATTTGACTCGAGAACCTAAACGCCGGAAGCACTGTCCGGTGGCGCTCGAGAATCTCGACGAGTTGACGTCCGCCTCCAATTCCAGCTTCGCTTTCACCTTCGACACCAAATTCTGCGGGTTTGCGGCTGAGGTCACTCCGAAATTCGGATCGTTCAATTCGATGGCACCGGAAATCGAGAAGAAAGAGCAGAGCGAAGTGAGAGTGAGAGGAGACGAAGATCGGAAAGGAGAGACCGTACAGCGAGAAGAAGAGGACGATGAAGAACGAGAAATCGGCGACGCGTTGCGGGAAGCAATTGGAGGAGGTCTGGAATCAGTTGCGGATTGA
Protein sequence
MAEPQTRENLAQNPSLSPLSRSSFAAADPDPADHPPVPPAAVAVADDAGNEDPDLTREPKRRKHCPVALENLDELTSASNSSFAFTFDTKFCGFAAEVTPKFGSFNSMAPEIEKKEQSEVRVRGDEDRKGETVQREEEDDEEREIGDALREAIGGGLESVAD
Homology
BLAST of Sgr026760 vs. NCBI nr
Match:
KAG6604296.1 (hypothetical protein SDJN03_04905, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034454.1 hypothetical protein SDJN02_04183, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 198.0 bits (502), Expect = 6.4e-47
Identity = 122/183 (66.67%), Postives = 137/183 (74.86%), Query Frame = 0
Query: 1 MAEPQTRENLAQNPSLSPLSRSSFAAADPDPADHPPVPP--AAVAVAD--DAGNEDPDLT 60
MAEPQTREN AQNPSLSPLSRSSF+AADPDP + VP A A AD D G EDPDL
Sbjct: 1 MAEPQTRENFAQNPSLSPLSRSSFSAADPDPGERSLVPTTLAVSAAADFSDVGIEDPDLI 60
Query: 61 REPKRRKHCPVALENLDELTSASNSSFAFTFDTKFCGFAAEVTPKFGSFNSMAPEIE--K 120
REPKRRKHCP ALENLDELTSASNSSF FTFDTKFCG +AE+TPKFGSFNS+ E+E K
Sbjct: 61 REPKRRKHCPSALENLDELTSASNSSFGFTFDTKFCGVSAEITPKFGSFNSIVSEMESTK 120
Query: 121 KEQSEVRV--------RGDEDRK------GETVQREEEDDEEREIGDALREAI-GGGLES 163
KE+ E R+ RGDE+R+ E + EEE++EE+E+ DAL EAI GGGLES
Sbjct: 121 KEKKEQRLVLDSASKTRGDEEREESVNRGTEEEEEEEEEEEEKEVADALLEAIEGGGLES 180
BLAST of Sgr026760 vs. NCBI nr
Match:
KAG6595438.1 (hypothetical protein SDJN03_11991, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027436.1 hypothetical protein SDJN02_11449, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 193.4 bits (490), Expect = 1.6e-45
Identity = 122/182 (67.03%), Postives = 135/182 (74.18%), Query Frame = 0
Query: 1 MAEPQTRENLAQNPSLSPLSRSSFAAADPDPADHPPVPPA------AVAVADDAGNEDPD 60
MAEPQTRE AQNPSLS LSRSSF AAD DPADHP PPA A + + D EDPD
Sbjct: 1 MAEPQTRETFAQNPSLSILSRSSFVAADSDPADHPLAPPAVAVTVTAASDSSDVAIEDPD 60
Query: 61 LTREPKRRKHCPVALENLDELTSASNSSFAFTFDTKFCGFAAEVTPKFGSFNSMAPEIE- 120
L REPKRRKHCP ALENLDELTSASNSSFAFTFDTKFCGF+AE+TPKFGSFNS+A E E
Sbjct: 61 LLREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAHETET 120
Query: 121 ----KKEQSEV-----RVRGD-EDRKGETVQREEEDDEEREIGDALREAIG---GGLESV 163
KKEQ V VRGD E+ K ++VQR E+D++E ++ DAL EAIG GLESV
Sbjct: 121 KKKKKKEQRSVLDLASGVRGDEEEEKLDSVQR-EQDEQEIKVTDALLEAIGEGREGLESV 180
BLAST of Sgr026760 vs. NCBI nr
Match:
KGN54677.1 (hypothetical protein Csa_012626 [Cucumis sativus])
HSP 1 Score: 183.7 bits (465), Expect = 1.2e-42
Identity = 113/158 (71.52%), Postives = 123/158 (77.85%), Query Frame = 0
Query: 1 MAEPQTRENLAQNPSLSPLSRSSF--AAADPDPADHPPVPPAAVAVADDAGNEDPDLTRE 60
MAEPQTRENLAQN SLSPLSRSSF AA DPDP D PP+ P AVAV EDPDL RE
Sbjct: 1 MAEPQTRENLAQNLSLSPLSRSSFSPAAVDPDPVD-PPLSPPAVAVL-----EDPDLIRE 60
Query: 61 PKRRKHCPVALENLDELTSASNSSFAFTFDTKFCGFAAEVTPKFGSFNSMAPEIE---KK 120
PKRRKHCP ALENLDELTSASNSSFAFTFDTKFCGF+AE+TPKFGSFNS+APE+E KK
Sbjct: 61 PKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAPEMERNQKK 120
Query: 121 EQSEVRVRGDEDRKGETVQREEEDDEEREIGDALREAI 154
+ EVRV +E + EEE++EE I DAL EAI
Sbjct: 121 AEREVRVEEEE----SVHKVEEEEEEEIGIADALLEAI 148
BLAST of Sgr026760 vs. NCBI nr
Match:
KAA0025819.1 (uncharacterized protein E6C27_scaffold34G00730 [Cucumis melo var. makuwa] >TYK09637.1 uncharacterized protein E5676_scaffold447G00340 [Cucumis melo var. makuwa])
HSP 1 Score: 174.1 bits (440), Expect = 9.8e-40
Identity = 99/131 (75.57%), Postives = 108/131 (82.44%), Query Frame = 0
Query: 1 MAEPQTRENLAQNPSLSPLSRSSFA--AADPDPADHPPVPPAAVAVADDAGNEDPDLTRE 60
MAEPQTRENLAQN SLSPLSRSSF+ A DPDP D PP+ P AVA +DPDL RE
Sbjct: 1 MAEPQTRENLAQNLSLSPLSRSSFSPPAVDPDPVD-PPLSPPAVAPL-----QDPDLIRE 60
Query: 61 PKRRKHCPVALENLDELTSASNSSFAFTFDTKFCGFAAEVTPKFGSFNSMAPEIE---KK 120
PKRRKHCP ALENLDELTSASNSSFAFTFDTKFCGF+AE+TPKFGSFNS+APE+E KK
Sbjct: 61 PKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAPEMERNQKK 120
Query: 121 EQSEVRVRGDE 127
E+ EVRV +E
Sbjct: 121 EEREVRVEEEE 125
BLAST of Sgr026760 vs. NCBI nr
Match:
XP_016488105.1 (PREDICTED: uncharacterized protein LOC107808130 [Nicotiana tabacum])
HSP 1 Score: 87.8 bits (216), Expect = 9.3e-14
Identity = 59/131 (45.04%), Postives = 78/131 (59.54%), Query Frame = 0
Query: 17 SPLSRSSFAAADPDPADHPPVPPAAVAVADDAGNEDPDLTREPKRRKHCPVALENLDELT 76
SP + S A PD D PP AA + + EDPD R+PKRRK+CP AL+ D +
Sbjct: 9 SPAANCSTPA--PDTVDDPPPQAAAESCEEKPDKEDPDSLRQPKRRKNCPTALDKFDSVN 68
Query: 77 SASNSSFAFTFDTKFCGFAA-EVTPKFGSFNSMAPEI--EKKEQSEVRVRGDEDRKGETV 136
SA+N F+F+FD+KF G + EVTPKFGSFN + P+ K +SE R ++D
Sbjct: 69 SATNLGFSFSFDSKFSGCSTPEVTPKFGSFNRVKPKTVSSKDPKSEERELKEDD------ 128
Query: 137 QREEEDDEERE 145
E+EDDEER+
Sbjct: 129 --EDEDDEERD 129
BLAST of Sgr026760 vs. ExPASy TrEMBL
Match:
A0A0A0L245 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G420180 PE=4 SV=1)
HSP 1 Score: 183.7 bits (465), Expect = 6.0e-43
Identity = 113/158 (71.52%), Postives = 123/158 (77.85%), Query Frame = 0
Query: 1 MAEPQTRENLAQNPSLSPLSRSSF--AAADPDPADHPPVPPAAVAVADDAGNEDPDLTRE 60
MAEPQTRENLAQN SLSPLSRSSF AA DPDP D PP+ P AVAV EDPDL RE
Sbjct: 1 MAEPQTRENLAQNLSLSPLSRSSFSPAAVDPDPVD-PPLSPPAVAVL-----EDPDLIRE 60
Query: 61 PKRRKHCPVALENLDELTSASNSSFAFTFDTKFCGFAAEVTPKFGSFNSMAPEIE---KK 120
PKRRKHCP ALENLDELTSASNSSFAFTFDTKFCGF+AE+TPKFGSFNS+APE+E KK
Sbjct: 61 PKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAPEMERNQKK 120
Query: 121 EQSEVRVRGDEDRKGETVQREEEDDEEREIGDALREAI 154
+ EVRV +E + EEE++EE I DAL EAI
Sbjct: 121 AEREVRVEEEE----SVHKVEEEEEEEIGIADALLEAI 148
BLAST of Sgr026760 vs. ExPASy TrEMBL
Match:
A0A5D3CCB2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00340 PE=4 SV=1)
HSP 1 Score: 174.1 bits (440), Expect = 4.8e-40
Identity = 99/131 (75.57%), Postives = 108/131 (82.44%), Query Frame = 0
Query: 1 MAEPQTRENLAQNPSLSPLSRSSFA--AADPDPADHPPVPPAAVAVADDAGNEDPDLTRE 60
MAEPQTRENLAQN SLSPLSRSSF+ A DPDP D PP+ P AVA +DPDL RE
Sbjct: 1 MAEPQTRENLAQNLSLSPLSRSSFSPPAVDPDPVD-PPLSPPAVAPL-----QDPDLIRE 60
Query: 61 PKRRKHCPVALENLDELTSASNSSFAFTFDTKFCGFAAEVTPKFGSFNSMAPEIE---KK 120
PKRRKHCP ALENLDELTSASNSSFAFTFDTKFCGF+AE+TPKFGSFNS+APE+E KK
Sbjct: 61 PKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAPEMERNQKK 120
Query: 121 EQSEVRVRGDE 127
E+ EVRV +E
Sbjct: 121 EEREVRVEEEE 125
BLAST of Sgr026760 vs. ExPASy TrEMBL
Match:
A0A1S4BGV3 (uncharacterized protein LOC107808130 OS=Nicotiana tabacum OX=4097 GN=LOC107808130 PE=4 SV=1)
HSP 1 Score: 87.8 bits (216), Expect = 4.5e-14
Identity = 59/131 (45.04%), Postives = 78/131 (59.54%), Query Frame = 0
Query: 17 SPLSRSSFAAADPDPADHPPVPPAAVAVADDAGNEDPDLTREPKRRKHCPVALENLDELT 76
SP + S A PD D PP AA + + EDPD R+PKRRK+CP AL+ D +
Sbjct: 9 SPAANCSTPA--PDTVDDPPPQAAAESCEEKPDKEDPDSLRQPKRRKNCPTALDKFDSVN 68
Query: 77 SASNSSFAFTFDTKFCGFAA-EVTPKFGSFNSMAPEI--EKKEQSEVRVRGDEDRKGETV 136
SA+N F+F+FD+KF G + EVTPKFGSFN + P+ K +SE R ++D
Sbjct: 69 SATNLGFSFSFDSKFSGCSTPEVTPKFGSFNRVKPKTVSSKDPKSEERELKEDD------ 128
Query: 137 QREEEDDEERE 145
E+EDDEER+
Sbjct: 129 --EDEDDEERD 129
BLAST of Sgr026760 vs. ExPASy TrEMBL
Match:
A0A0V0HAK9 (Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1)
HSP 1 Score: 85.9 bits (211), Expect = 1.7e-13
Identity = 64/163 (39.26%), Postives = 89/163 (54.60%), Query Frame = 0
Query: 1 MAEPQTRENLAQNPSLSPLSRSSFAAADPDPADHPPVPPAAVAVADDAGNEDPDLTREPK 60
M P++ + A+N S P +S + DP P P A + + EDPD+ R+PK
Sbjct: 1 MENPKSDQAPAENCS-DPAPSNSNSGDDPSP------PTTAESWEEKPEIEDPDILRQPK 60
Query: 61 RRKHCPVALENLDELTSASNSSFAFTFDTKFCGFAA-EVTPKFGSFNSMAPEIEKKEQSE 120
RRK+CP AL+ D + S SN F+F+FD+KF G + EVTPKFGSFN + P K +SE
Sbjct: 61 RRKNCPSALDKFDSVNSGSNFGFSFSFDSKFSGCSTPEVTPKFGSFNRVKPGSTKDPKSE 120
Query: 121 VRVRGDEDRKGETVQREEEDDEEREIGDALREAIGGGLESVAD 163
V +ED E++DD++ E D + E GL S D
Sbjct: 121 ETVLEEED--------EDDDDDDEEKPDVVVEKNSMGLLSSVD 148
BLAST of Sgr026760 vs. ExPASy TrEMBL
Match:
A0A2P5B5L4 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_332090 PE=4 SV=1)
HSP 1 Score: 83.6 bits (205), Expect = 8.5e-13
Identity = 50/103 (48.54%), Postives = 66/103 (64.08%), Query Frame = 0
Query: 16 LSPLSRSSFAAADPDPADHPPVPPAAVAVADDAGNEDPDLTREPKRRKHCPVALENLDEL 75
++P S A +PD + PPVP A A++ NE+PD TREPKRR++CP ALE ++EL
Sbjct: 10 ITPTPILSVAPKNPDSGEDPPVP--ATVSAENPENEEPDSTREPKRRRYCPKALEKVEEL 69
Query: 76 TSA--SNSSFAFTFDTKF-CGFAAEVTPKFGSFNSMAPEIEKK 116
+ N +F+F+FDTKF G E TPKFGSF+ A EKK
Sbjct: 70 VARPDPNPNFSFSFDTKFMTGSGTETTPKFGSFDLKALVSEKK 110
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6604296.1 | 6.4e-47 | 66.67 | hypothetical protein SDJN03_04905, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6595438.1 | 1.6e-45 | 67.03 | hypothetical protein SDJN03_11991, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KGN54677.1 | 1.2e-42 | 71.52 | hypothetical protein Csa_012626 [Cucumis sativus] | [more] |
KAA0025819.1 | 9.8e-40 | 75.57 | uncharacterized protein E6C27_scaffold34G00730 [Cucumis melo var. makuwa] >TYK09... | [more] |
XP_016488105.1 | 9.3e-14 | 45.04 | PREDICTED: uncharacterized protein LOC107808130 [Nicotiana tabacum] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L245 | 6.0e-43 | 71.52 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G420180 PE=4 SV=1 | [more] |
A0A5D3CCB2 | 4.8e-40 | 75.57 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S4BGV3 | 4.5e-14 | 45.04 | uncharacterized protein LOC107808130 OS=Nicotiana tabacum OX=4097 GN=LOC10780813... | [more] |
A0A0V0HAK9 | 1.7e-13 | 39.26 | Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1 | [more] |
A0A2P5B5L4 | 8.5e-13 | 48.54 | Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_332090 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |