Sgr026685 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr026685
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00153033: 2555090 .. 2555791 (+)
RNA-Seq Expression	Sgr026685
Synteny	Sgr026685

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATTGATAACAGTTGCAGCAACATTGGCCAGCCCTCCATCAGGAACATCCTTCCGGAATCTGACTCCAGGGGCCAGCCCCGGACCTCCAATTGCAACAGGAACCTACGTTGTTCAAAAATCCAACCAACATTTTAAACCCTAGCAATAGATTTAAGACGCCTCCTCTGTTATATTTTTCATGCCCCCAAATCTCCTTTTTTTCAGAATCATTTCGAACCGTTTTGAAGAATAGCTTCCTACTTTTTAGAACGTAAAAATATAATTTGAGTGACTATTTTTTAAAAGTTATTTCTTTTAGTTTGCTTTCTCATAGATGACCTACGTTCTTCGGACTTGTGTACAGTGATTTCAAATGTACCATAATTATGTTCTGATCATAGTTCTTAGACAACTCCAAGGAGCCCCTAATTTACAACTCCTATTAGGTATATGTTGATTTGGTTCTATAAATAATCTAGCATTTCTATTTGCTAAGAAAGCCAGAAAGCTTACAGGCTGAAGAGTGTGAGAAGTGAGGATTTGAATGTTGCCACTTTTGTCAAGAAGAGGCTGTCCAGACTTGCTTCTCTTCACCATATCCTCAGCATTTCCGTGATCTGCGGTGACAACATAGATTCCCCCTACTTGTTCAATTGCATCCAGGATCATCTGCAACCAAAACTCTACGAAATTGAGCAGATGGGAAAAAGATGTTGA

mRNA sequence

ATGGAGATTGATAACAGTTGCAGCAACATTGGCCAGCCCTCCATCAGGAACATCCTTCCGGAATCTGACTCCAGGGGCCAGCCCCGGACCTCCAATTGCAACAGGAACCTACAAAGCCAGAAAGCTTACAGGCTGAAGAGTGTGAGAAGTGAGGATTTGAATGTTGCCACTTTTGTCAAGAAGAGGCTGTCCAGACTTGCTTCTCTTCACCATATCCTCAGCATTTCCGTGATCTGCGGTGACAACATAGATTCCCCCTACTTGTTCAATTGCATCCAGGATCATCTGCAACCAAAACTCTACGAAATTGAGCAGATGGGAAAAAGATGTTGA

Coding sequence (CDS)

ATGGAGATTGATAACAGTTGCAGCAACATTGGCCAGCCCTCCATCAGGAACATCCTTCCGGAATCTGACTCCAGGGGCCAGCCCCGGACCTCCAATTGCAACAGGAACCTACAAAGCCAGAAAGCTTACAGGCTGAAGAGTGTGAGAAGTGAGGATTTGAATGTTGCCACTTTTGTCAAGAAGAGGCTGTCCAGACTTGCTTCTCTTCACCATATCCTCAGCATTTCCGTGATCTGCGGTGACAACATAGATTCCCCCTACTTGTTCAATTGCATCCAGGATCATCTGCAACCAAAACTCTACGAAATTGAGCAGATGGGAAAAAGATGTTGA

Protein sequence

MEIDNSCSNIGQPSIRNILPESDSRGQPRTSNCNRNLQSQKAYRLKSVRSEDLNVATFVKKRLSRLASLHHILSISVICGDNIDSPYLFNCIQDHLQPKLYEIEQMGKRC

Homology

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BLAST of Sgr026685 vs. ExPASy TrEMBL
Match: A0A7C9A335 (Uncharacterized protein (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 8.9e-06
Identity = 35/78 (44.87%), Postives = 52/78 (66.67%), Query Frame = 0


Query: 1  MEIDNSCSNIGQPSIRNILPESDSRGQPRTSNCNRNLQSQKAYRLKSVRSEDLNVATFVK 60
          M+I +  S+IG+P+I  I  ESD+R +PRTS+ NR       +  + VR ++LN++  VK
Sbjct: 28 MKIHHGSSHIGEPTIWKIPAESDTRCKPRTSDRNR-------HWFQCVRCKNLNLSILVK 87

Query: 61 KRLSRLASLHHILSISVI 79
          KRLS L S HH+ SIS++
Sbjct: 88 KRLSFLVSFHHVFSISMV 98

The following BLAST results are available for this feature:

BLAST of Sgr026685 vs.


Match Name	E-value	Identity	Description

BLAST of Sgr026685 vs.


Match Name	E-value	Identity	Description

BLAST of Sgr026685 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7C9A335	8.9e-06	44.87	Uncharacterized protein (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1	[more]

BLAST of Sgr026685 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr026685.1	Sgr026685.1	mRNA