Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGACGGAGGAGTTGCAGAGGAGCATCATCCTCAGAACGTCCCTCATGGACGAGAAGGTGAAGAGGAAGAAGAAGAAAAGGCAAGTGGGTTTCTGAGGAATTTCATATCGAACATGGTCTCTGCAGAGGGAAGTGAAGAAAACAAAGGAAAAGAAGAGGAAAAGACAAGTGGGTTTCTGAAGAATTTCATGTCGAACATGGTGTCTGCAAAAGGAGGTGAAGAAAAGAAAGACCAAGAAGAAGGGGCAAGTGGTAATGGAGTGGATAAAGGCGGCGGTTCAGAGTCGGTGGAAGATGAGGGCGGCGGTGGGAATGGCGGAAGGAGTATCAGCAACATGATTGCAGATCTATTCCATCAAGGTGAAACGGAGGAGAACGTTAAGCCAGGCGGCGGCGGCGGCGGCGGAGGCATTATTGATACAATCGTCGCCCACTTGCCTGCTTCACTTCAAGGTCGGCATATATATATATATATTTTAAAAAATAAAGATTATTTTGAGTTAATTTAACTTTACATATTTTTGGACATGGACATAGTAATGAGAGAATGGTTTTTGTTTTGTAATGAACGAAAAAACAGGTGATGCAGTGACCACAACTGACGAAGCTGCAATTCTGATTCACTCAATTATCCATGAATAA
mRNA sequence
ATGGAAGACGGAGGAGTTGCAGAGGAGCATCATCCTCAGAACGTCCCTCATGGACGAGAAGGTGAAGAGGAAGAAGAAGAAAAGGCAAGTGGGTTTCTGAGGAATTTCATATCGAACATGGTCTCTGCAGAGGGAAGTGAAGAAAACAAAGGAAAAGAAGAGGAAAAGACAAGTGGGTTTCTGAAGAATTTCATGTCGAACATGGTGTCTGCAAAAGGAGGTGAAGAAAAGAAAGACCAAGAAGAAGGGGCAAGTGGTAATGGAGTGGATAAAGGCGGCGGTTCAGAGTCGGTGGAAGATGAGGGCGGCGGTGGGAATGGCGGAAGGAGTATCAGCAACATGATTGCAGATCTATTCCATCAAGGTGAAACGGAGGAGAACGTTAAGCCAGGCGGCGGCGGCGGCGGCGGAGGCATTATTGATACAATCGTCGCCCACTTGCCTGCTTCACTTCAAGGTGATGCAGTGACCACAACTGACGAAGCTGCAATTCTGATTCACTCAATTATCCATGAATAA
Coding sequence (CDS)
ATGGAAGACGGAGGAGTTGCAGAGGAGCATCATCCTCAGAACGTCCCTCATGGACGAGAAGGTGAAGAGGAAGAAGAAGAAAAGGCAAGTGGGTTTCTGAGGAATTTCATATCGAACATGGTCTCTGCAGAGGGAAGTGAAGAAAACAAAGGAAAAGAAGAGGAAAAGACAAGTGGGTTTCTGAAGAATTTCATGTCGAACATGGTGTCTGCAAAAGGAGGTGAAGAAAAGAAAGACCAAGAAGAAGGGGCAAGTGGTAATGGAGTGGATAAAGGCGGCGGTTCAGAGTCGGTGGAAGATGAGGGCGGCGGTGGGAATGGCGGAAGGAGTATCAGCAACATGATTGCAGATCTATTCCATCAAGGTGAAACGGAGGAGAACGTTAAGCCAGGCGGCGGCGGCGGCGGCGGAGGCATTATTGATACAATCGTCGCCCACTTGCCTGCTTCACTTCAAGGTGATGCAGTGACCACAACTGACGAAGCTGCAATTCTGATTCACTCAATTATCCATGAATAA
Protein sequence
MEDGGVAEEHHPQNVPHGREGEEEEEEKASGFLRNFISNMVSAEGSEENKGKEEEKTSGFLKNFMSNMVSAKGGEEKKDQEEGASGNGVDKGGGSESVEDEGGGGNGGRSISNMIADLFHQGETEENVKPGGGGGGGGIIDTIVAHLPASLQGDAVTTTDEAAILIHSIIHE
Homology
BLAST of Sgr026619 vs. NCBI nr
Match:
KAG7033757.1 (hypothetical protein SDJN02_03482, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 152.1 bits (383), Expect = 4.3e-33
Identity = 108/196 (55.10%), Postives = 121/196 (61.73%), Query Frame = 0
Query: 3 DGGVAEEHHPQNVPHGREGEEEEE--EKASGFLRNFISNMVSAEGSEENKGKEEEKTSGF 62
+GG AEE HPQ + R GEEEEE EK+SGFLRNFISNMVSAEG EENK ++EEK SGF
Sbjct: 24 EGGAAEE-HPQKLIQQRGGEEEEEEKEKSSGFLRNFISNMVSAEGGEENKEEDEEKESGF 83
Query: 63 LKNFMSNMVSAKGGEEKKDQEE------------------GASGN------GVDKGGGSE 122
LKNF+S+MVSA+ EEK ++EE A GN DK GGSE
Sbjct: 84 LKNFISSMVSAEESEEKTEKEEEQQGKKSGFLKNFIANMASAEGNEDGGEEERDKSGGSE 143
Query: 123 SVEDEGGGGNGGRSISNMIADLFHQGETEENVKPGGGGGGGGIIDTIVAHLPASLQGDAV 173
SVE++ GG G GG GGGIID IV+HLPASLQGDA
Sbjct: 144 SVEEKSSGG-------------------------GNGGAGGGIIDNIVSHLPASLQGDAA 193
BLAST of Sgr026619 vs. NCBI nr
Match:
KAG6603566.1 (hypothetical protein SDJN03_04175, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 149.8 bits (377), Expect = 2.1e-32
Identity = 107/196 (54.59%), Postives = 120/196 (61.22%), Query Frame = 0
Query: 3 DGGVAEEHHPQNVPHGREGEEEEE---EKASGFLRNFISNMVSAEGSEENKGKEEEKTSG 62
+GG AEE HPQ + R GEEEEE EK+SGFLRNFISNMVSAEG EE K ++EEK SG
Sbjct: 24 EGGAAEE-HPQKLIQQRGGEEEEEEEKEKSSGFLRNFISNMVSAEGGEEKKEEDEEKESG 83
Query: 63 FLKNFMSNMVSAKGGEEKKDQEE-----------------GASGN------GVDKGGGSE 122
FLKNF+S+MVSA+ EEK ++EE A GN DK GGSE
Sbjct: 84 FLKNFISSMVSAEESEEKTEKEEEQGKKSGFLKNFIANMASAEGNEDGGEEERDKSGGSE 143
Query: 123 SVEDEGGGGNGGRSISNMIADLFHQGETEENVKPGGGGGGGGIIDTIVAHLPASLQGDAV 173
SVE++ GG G GG GGGIID IV+HLPASLQGDA
Sbjct: 144 SVEEKSSGG-------------------------GNGGAGGGIIDNIVSHLPASLQGDAA 193
BLAST of Sgr026619 vs. NCBI nr
Match:
XP_022950411.1 (cilia- and flagella-associated protein 251 isoform X1 [Cucurbita moschata])
HSP 1 Score: 149.4 bits (376), Expect = 2.8e-32
Identity = 105/188 (55.85%), Postives = 119/188 (63.30%), Query Frame = 0
Query: 3 DGGVAEEHHPQNVPHGREGEEEEE---EKASGFLRNFISNMVSAEGSEENKGKEEEKTSG 62
+GG AEE HPQ + R GEEEEE EK+SGFLRNFISNMVSAEG EE K ++EEK SG
Sbjct: 24 EGGAAEE-HPQKLIQQRGGEEEEEEEKEKSSGFLRNFISNMVSAEGGEEKKEEDEEKESG 83
Query: 63 FLKNFMSNMVSAKGGEEK--KDQEEG-------------ASGNGVDKGGGSESVEDEGGG 122
FLKNF+S+MVSA+ EEK K++E+G AS G + GG E D+ GG
Sbjct: 84 FLKNFISSMVSAEESEEKTEKEEEQGKKSGFLKNFIANMASAEGNEDGG--EEERDKSGG 143
Query: 123 GNGGRSISNMIADLFHQGETEENVKPGGGGGGGGIIDTIVAHLPASLQGDAVTTTDEAAI 173
EE G GG GGGIID IV+HLPASLQGDA TTTDEAAI
Sbjct: 144 SE----------------SVEEKSSGGNGGAGGGIIDNIVSHLPASLQGDAATTTDEAAI 192
BLAST of Sgr026619 vs. NCBI nr
Match:
XP_022950412.1 (cilia- and flagella-associated protein 251 isoform X2 [Cucurbita moschata])
HSP 1 Score: 149.4 bits (376), Expect = 2.8e-32
Identity = 105/188 (55.85%), Postives = 119/188 (63.30%), Query Frame = 0
Query: 3 DGGVAEEHHPQNVPHGREGEEEEE---EKASGFLRNFISNMVSAEGSEENKGKEEEKTSG 62
+GG AEE HPQ + R GEEEEE EK+SGFLRNFISNMVSAEG EE K ++EEK SG
Sbjct: 2 EGGAAEE-HPQKLIQQRGGEEEEEEEKEKSSGFLRNFISNMVSAEGGEEKKEEDEEKESG 61
Query: 63 FLKNFMSNMVSAKGGEEK--KDQEEG-------------ASGNGVDKGGGSESVEDEGGG 122
FLKNF+S+MVSA+ EEK K++E+G AS G + GG E D+ GG
Sbjct: 62 FLKNFISSMVSAEESEEKTEKEEEQGKKSGFLKNFIANMASAEGNEDGG--EEERDKSGG 121
Query: 123 GNGGRSISNMIADLFHQGETEENVKPGGGGGGGGIIDTIVAHLPASLQGDAVTTTDEAAI 173
EE G GG GGGIID IV+HLPASLQGDA TTTDEAAI
Sbjct: 122 SE----------------SVEEKSSGGNGGAGGGIIDNIVSHLPASLQGDAATTTDEAAI 170
BLAST of Sgr026619 vs. NCBI nr
Match:
XP_023544439.1 (cilia- and flagella-associated protein 251 isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 147.9 bits (372), Expect = 8.0e-32
Identity = 107/195 (54.87%), Postives = 120/195 (61.54%), Query Frame = 0
Query: 3 DGGVAEEHHPQNVPHGREGEEEEE--EKASGFLRNFISNMVSAEGSEENKGKEEEKTSGF 62
+GG AEE HPQ + R GEEEEE EK+SGFLRNFISNMVSAEG EE K ++EEK SGF
Sbjct: 2 EGGAAEE-HPQKLIQQRGGEEEEEEKEKSSGFLRNFISNMVSAEGGEEKKEEDEEKESGF 61
Query: 63 LKNFMSNMVSAKGGEEKKDQEE-----------------GASGN------GVDKGGGSES 122
LKNF+S+MVSA EEK ++EE A GN DK GGSES
Sbjct: 62 LKNFISSMVSADEREEKTEKEEEQGKKSGFLKNFIANMASAEGNEDGGEEERDKSGGSES 121
Query: 123 VEDEGGGGNGGRSISNMIADLFHQGETEENVKPGGGGGGGGIIDTIVAHLPASLQGDAVT 173
VE++ GGG+ GG GGGIID IV+HLPASLQGDAVT
Sbjct: 122 VEEKSGGGD--------------------------GGVGGGIIDNIVSHLPASLQGDAVT 169
BLAST of Sgr026619 vs. ExPASy TrEMBL
Match:
A0A6J1GER9 (cilia- and flagella-associated protein 251 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453519 PE=4 SV=1)
HSP 1 Score: 149.4 bits (376), Expect = 1.3e-32
Identity = 105/188 (55.85%), Postives = 119/188 (63.30%), Query Frame = 0
Query: 3 DGGVAEEHHPQNVPHGREGEEEEE---EKASGFLRNFISNMVSAEGSEENKGKEEEKTSG 62
+GG AEE HPQ + R GEEEEE EK+SGFLRNFISNMVSAEG EE K ++EEK SG
Sbjct: 24 EGGAAEE-HPQKLIQQRGGEEEEEEEKEKSSGFLRNFISNMVSAEGGEEKKEEDEEKESG 83
Query: 63 FLKNFMSNMVSAKGGEEK--KDQEEG-------------ASGNGVDKGGGSESVEDEGGG 122
FLKNF+S+MVSA+ EEK K++E+G AS G + GG E D+ GG
Sbjct: 84 FLKNFISSMVSAEESEEKTEKEEEQGKKSGFLKNFIANMASAEGNEDGG--EEERDKSGG 143
Query: 123 GNGGRSISNMIADLFHQGETEENVKPGGGGGGGGIIDTIVAHLPASLQGDAVTTTDEAAI 173
EE G GG GGGIID IV+HLPASLQGDA TTTDEAAI
Sbjct: 144 SE----------------SVEEKSSGGNGGAGGGIIDNIVSHLPASLQGDAATTTDEAAI 192
BLAST of Sgr026619 vs. ExPASy TrEMBL
Match:
A0A6J1GER3 (cilia- and flagella-associated protein 251 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453519 PE=4 SV=1)
HSP 1 Score: 149.4 bits (376), Expect = 1.3e-32
Identity = 105/188 (55.85%), Postives = 119/188 (63.30%), Query Frame = 0
Query: 3 DGGVAEEHHPQNVPHGREGEEEEE---EKASGFLRNFISNMVSAEGSEENKGKEEEKTSG 62
+GG AEE HPQ + R GEEEEE EK+SGFLRNFISNMVSAEG EE K ++EEK SG
Sbjct: 2 EGGAAEE-HPQKLIQQRGGEEEEEEEKEKSSGFLRNFISNMVSAEGGEEKKEEDEEKESG 61
Query: 63 FLKNFMSNMVSAKGGEEK--KDQEEG-------------ASGNGVDKGGGSESVEDEGGG 122
FLKNF+S+MVSA+ EEK K++E+G AS G + GG E D+ GG
Sbjct: 62 FLKNFISSMVSAEESEEKTEKEEEQGKKSGFLKNFIANMASAEGNEDGG--EEERDKSGG 121
Query: 123 GNGGRSISNMIADLFHQGETEENVKPGGGGGGGGIIDTIVAHLPASLQGDAVTTTDEAAI 173
EE G GG GGGIID IV+HLPASLQGDA TTTDEAAI
Sbjct: 122 SE----------------SVEEKSSGGNGGAGGGIIDNIVSHLPASLQGDAATTTDEAAI 170
BLAST of Sgr026619 vs. ExPASy TrEMBL
Match:
A0A6J1IPP2 (cyclin-dependent kinase 11A isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478323 PE=4 SV=1)
HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31
Identity = 103/176 (58.52%), Postives = 114/176 (64.77%), Query Frame = 0
Query: 3 DGGVAEEHHPQNVPHGREGEEEEE----EKASGFLRNFISNMVSAEGSEENKGKEEEKTS 62
+GG AEE HPQ R GEEEEE EK+SGFLRNFISNMVSAEG EE K ++EEK S
Sbjct: 2 EGGAAEE-HPQKPIQQRGGEEEEEEEEKEKSSGFLRNFISNMVSAEGGEEKKEEDEEKES 61
Query: 63 GFLKNFMSNMVSAKGGEEKKDQEEGASGNGVDKG--GGSESVEDEGGGGNGGRSISNMIA 122
FLKNF+S+MVSA+ EEK ++EE +G K S E GG R S
Sbjct: 62 RFLKNFISSMVSAEASEEKTEKEEEGKKSGFLKNFIANMASAEGNEDGGEEERDKSG--- 121
Query: 123 DLFHQGETEENVKPGGGGGGGGIIDTIVAHLPASLQGDAVTTTDEAAILIHSIIHE 173
EE G GG GGGIID IV+HLPASLQGDAVTTTDEAAILIHSIIHE
Sbjct: 122 ---GSESVEEKSDGGNGGAGGGIIDNIVSHLPASLQGDAVTTTDEAAILIHSIIHE 170
BLAST of Sgr026619 vs. ExPASy TrEMBL
Match:
A0A6J1ITP7 (cilia- and flagella-associated protein 251 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478323 PE=4 SV=1)
HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31
Identity = 103/176 (58.52%), Postives = 114/176 (64.77%), Query Frame = 0
Query: 3 DGGVAEEHHPQNVPHGREGEEEEE----EKASGFLRNFISNMVSAEGSEENKGKEEEKTS 62
+GG AEE HPQ R GEEEEE EK+SGFLRNFISNMVSAEG EE K ++EEK S
Sbjct: 24 EGGAAEE-HPQKPIQQRGGEEEEEEEEKEKSSGFLRNFISNMVSAEGGEEKKEEDEEKES 83
Query: 63 GFLKNFMSNMVSAKGGEEKKDQEEGASGNGVDKG--GGSESVEDEGGGGNGGRSISNMIA 122
FLKNF+S+MVSA+ EEK ++EE +G K S E GG R S
Sbjct: 84 RFLKNFISSMVSAEASEEKTEKEEEGKKSGFLKNFIANMASAEGNEDGGEEERDKSG--- 143
Query: 123 DLFHQGETEENVKPGGGGGGGGIIDTIVAHLPASLQGDAVTTTDEAAILIHSIIHE 173
EE G GG GGGIID IV+HLPASLQGDAVTTTDEAAILIHSIIHE
Sbjct: 144 ---GSESVEEKSDGGNGGAGGGIIDNIVSHLPASLQGDAVTTTDEAAILIHSIIHE 192
BLAST of Sgr026619 vs. ExPASy TrEMBL
Match:
A0A6J1HRZ7 (VID27-like protein OS=Cucurbita maxima OX=3661 GN=LOC111466210 PE=4 SV=1)
HSP 1 Score: 142.5 bits (358), Expect = 1.6e-30
Identity = 102/185 (55.14%), Postives = 121/185 (65.41%), Query Frame = 0
Query: 1 MEDGGVAEEHHPQNVPHGREGEEEEEEKASGFLRNFISNMVSAEGSEENKGK-------- 60
MEDG E PQN+ R G +EEEEKA GFLRNFISNMVS EGSEE KG+
Sbjct: 1 MEDGNT--EEVPQNLTQQR-GGKEEEEKAGGFLRNFISNMVSTEGSEEKKGEVEKESGVV 60
Query: 61 -----EEEKTSGFLKNFMSNMVSAKGGEEKKDQEEGASGNGVDKGGGSESVEDEGGGGNG 120
E+ K +GFLKNFMSN V + EE++++EE SG ++ + E+
Sbjct: 61 SEEKTEQGKANGFLKNFMSNRV-CEEEEEEEEEEEKKSGFLMNLISNMVNAEE------- 120
Query: 121 GRSISNMIADLFHQGETEENVKPGGGGGGGGIIDTIVAHLPASLQGDAVTTTDEAAILIH 173
G+ +SN + D GE E + K GGGGGGGGIID IV+HLPASLQGDAVTTTDEAAILIH
Sbjct: 121 GKEVSNAV-DSEKTGEGESD-KSGGGGGGGGIIDNIVSHLPASLQGDAVTTTDEAAILIH 172
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG7033757.1 | 4.3e-33 | 55.10 | hypothetical protein SDJN02_03482, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6603566.1 | 2.1e-32 | 54.59 | hypothetical protein SDJN03_04175, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_022950411.1 | 2.8e-32 | 55.85 | cilia- and flagella-associated protein 251 isoform X1 [Cucurbita moschata] | [more] |
| XP_022950412.1 | 2.8e-32 | 55.85 | cilia- and flagella-associated protein 251 isoform X2 [Cucurbita moschata] | [more] |
| XP_023544439.1 | 8.0e-32 | 54.87 | cilia- and flagella-associated protein 251 isoform X2 [Cucurbita pepo subsp. pep... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1GER9 | 1.3e-32 | 55.85 | cilia- and flagella-associated protein 251 isoform X1 OS=Cucurbita moschata OX=3... | [more] |
| A0A6J1GER3 | 1.3e-32 | 55.85 | cilia- and flagella-associated protein 251 isoform X2 OS=Cucurbita moschata OX=3... | [more] |
| A0A6J1IPP2 | 1.1e-31 | 58.52 | cyclin-dependent kinase 11A isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114783... | [more] |
| A0A6J1ITP7 | 1.1e-31 | 58.52 | cilia- and flagella-associated protein 251 isoform X1 OS=Cucurbita maxima OX=366... | [more] |
| A0A6J1HRZ7 | 1.6e-30 | 55.14 | VID27-like protein OS=Cucurbita maxima OX=3661 GN=LOC111466210 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
