Sgr026390 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr026390
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	RNA-binding protein 39-like
Location	tig00153031: 4824588 .. 4832889 (-)
RNA-Seq Expression	Sgr026390
Synteny	Sgr026390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTCGACGAGTACGATTACTTGGAGAAGGCTGTAGAGGATCAGGATGATAGGGACTCGAAGAAGGCAAAGAAGAATGAGAATGACAGGAATGAGAAAGGCAGCAGAAAGAGAGAGGTAGACGAGGAAGCTCAAGCTGGTTCTGGTGGTCGTGAGGATGAGGAGCTGAAGGTCAAGAGGTCGAGAGGCGAGTATGAGAATGGGAAGGACGATAGGGATCACTCGGGCCGAGGGAGGGATCGGCATCGAAGAGATAGAGAGGAAGAAACAGATGTGGGAAAAGAGAGGGATAGAGAGAGGAACCGTACGAGAGAGAGGGGTAGCAGTGAGAAGGAAAGGGATAGAGACAGGGATAGGGAGGAGAGAGATAGAGAAAGACATAAAGAGAAGGAGAGGGAGAGAGACAAGGATAGAAGGGATAAGGAGAGGGATAGAGAGAGACATAAGGAGAAGGAGAGGGAGAGAGACAAGGATAGAAGGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAAGAGAGAGAAAGGAGAGAAAGGGAGAGGAGGGAGCGGGAGAGAGAAGAGGAGAGATCGCGGCGAAGCCGGAGTCGGTCAGTTCGGGAGCGAGAACGTGAAGTTGATGTCAGAGAAAACAGGTAATTGTTCACTTGTGCATTCTTTGTTGAACTGTGATCTTCTTGAAAGCTATCCGTTGACTGTTGGTTGTTGCTTGTATATATTTCTTGTCGTCATTCTTGAAAATTCTAGTCTGGTGTGTAACTGTTAAATATTTTTTAGATAATTGCTTATTAATGTCGTCTATAAATTTGAATTTGTTATATTAAACAACATGACATTGTATAGGGTAGGAAATTGACAAACAACCAATGTTAACCATGTTGTTGAAATCCTGGAAACCCATCATTTATTTATATATTTATTTTTAAGTTACTTAGAACTTCCAAGAATGGAGGCATCAAACGGAATTATAGAAGTTTAGAGACGTCCTCCAAGTTCTTTTTATATTTTTATTATTCATTCTATTTTCTTAATGTGTTCTATCAGCTAAGTTGTTGATATTCAGTGATGAGGGTCTTATTGGGAAGAAGATTCAAATTTATTCAGAAAAAGTTTGTGCATCCACATAATCATTATCACCTAATAATATAGAGTGGGAAGAAGAAACCTGAGTGGTTCTTAATTTCTTATACATTTTTTGTTTAAATTATTATATTGTCCTTCATTTTTCCCTGATGTTTTGGGTGTGCGAATGGCAGGAGAATGAAGGAAAAGAAAGACATGGTGGAGCCTGAAGCTGATCCAGAGAGGGATCAAAGAACTGTATTTGCTTATCAGGTTGATGGATTCCCTCTGTAATTTTTCTTACCTTTGATGTTTTTGTTCACATTTTGCTTATCATTTTTGTTATCTTTTATATTCTTTGTACAGATGCCTTTGAAGGCCACTGAGAGAGATGTCTACGAATTCTTTTCAAAAGCAGGAAAGGTATTTGAAACTTATTACTGAAGAGAGGCATTTGAGTGTTTACTTTTTATTTTTCTGAAAATTAACAATTAAAGGTATTAGCAGTCATATTTCATCTATATAATTTCCTATGTCGTGCCCCTTGCACTGGTTCACCTCTGTAACATGTATTAGAATAATACATATTTGTTGCAATGTTATTGCTACAAAGATTATAGTTGCATAGATATTGAGATAGATTTGCTTCATATTGCAGTTACTGTTCCTCTGCCTTCAGTTTCGAAACTATAATCAATTTCTTCTATCTCAACATTCTGTTTATATGGGGTGAGTGAAAATGTATATATGAGTTCTGTCGTCATCTCATTGATGGCCAGATGGTGCTGTGCCTCGTGTGTAAAGTATGGAAACCTTTATTGCTTTTCTCTTTGCTGGCCAATAACCTGCTCTCATTGTTCTTTCTATTTTCAGGTGAGAGATGTCCGGCTGATCATGGACAGGAATTCTAGACGGTCAAAAGGAGTTGGGTATGTGGTCTTGGATGTGTAATTTTTATATTGTATGCTTGTGATCTTGTTAATATGGTTATTAACATAGTAGTTTTCAAGTATCAAATTTGACTGTATTTTTAAATGAACTAGCAATGCGATAATGATGAGGGATGGTGGGAATACAATGCAGTCATGTTTAATCAATTCATGCTGCTTGTTCAAGGTAGATAACATAATCCTGAGGTTTCCTTTGTTGTTTTCCCCATCGTACTCCTAATTTTGCTCCTCTATGTTTTTGTGCAGATAAGAAACAGTCCTAACTCCTATGACTCTGTTATCTCTGGTCTTGGTTTTAGATTCATCTCATTCTATTATAAATTTCCTCGTTCAAATTAACTTTCTGACCTTGATTTGTGATGCTTTATTAAAATGAACATGCTTGTTGTGTATCATCTTCTTTCATTGTTTCTTTTCCCTATTTTCTTCTCTTTTTTTCTCTTGGGAATAATGCAGAGAGGGCTCTGGGGTTTTTTTTTTTGGGTCTATTATCTTTTTTTTTTTAAAAGTAAAAAAAAGGGAAATTGGTCTTCTGTGGTATCTACACATTCCCATAGTAGTTACTGTCTAATGATTTTCAATAATGATTTTTTTTGGGGGATTAATTTGTGTATGCAAATATGCTCATTGATAAGATTAGAAAGGTTGATGAATAGTCACCATACGATCCCCTCCCTCTTCTATTCTACGCTGGTCAACTGCTATTTGGCTTTGGGTTACCTCTTTATTTGATGAACTGACCTGATTATCTAATCAGTCAGAAGAAACTCAGAGGTCTCTGCACTTTGTGTGTTTTTTTTCTCTGATGCTTTATAAGTTTTGTGTCTTATTTTTTATTGTCTCATGTTCTAATAATTTTACTTTGAGGCATTGGTGAAATTGCAGGTATGTTGAATTTTATGACGCGATGTCTGTGCCCATGGCTATCGCTCTCTCTGGTCAACTACTTCTTGGCCAACCTGTAATGGTTAAACCTTCAGAGGCTGAAAAGAATCTTGTTCAATCAAATACGTCAGGAGCCTCGGGTGCAGGGCCATATGGAGCAGTAGACAGGAAACTTTATGTTGGAAATTTACATTTTAACATGACTGAGACTCACCTTAGAGAGGTACTAGACTAATTAATCTACAGTTTAATTTACATTTAATTTCCTTTCATACGTAGTTATTTTCTTTACAAGTAACAAATGTAGACTGTCATTGAATGATAAGCAATTTTACGCACCAATATCATTTGCAAACGTATATGCAGCGATTATGGTTTTCCTGCTGTAAAATTATAGCTTATGAATAATAGATGCCTTGTCAGAGGATTTAGAGTTTGTTTCTTCAGTTTTAAAATACTTATATCATAATAAATTTTTTGATAATCACTTTGTTATTAGATTTTTGAAGCATTTGGTCCTGTCGAGCTCGTGCAACTACCTCTTGACCTTGAGTCAGGTCACTGCAAGGGTTTTGGATTTGTTCAAGTGGGTAATACATTTATTATCAATTTTTGCAAGTTTTCAATATACTATCATAACTATCTGTCATAATTTTTGAGTTGTTTCCAGTTTGCTCATCTAGAACATGCAAAGCAGCTCAAAGCTTGAATGGAAAATTAGAAATTGCTGGCCGAACCATCAAGGTAGTCTTCTACTAGAATCTTTAAGATTTTGACTTATTTCTAGTACTTATATATCTCTTTGTTATTAGCTTGTCTCTGGAAAACGATGACATTGTTGGTTTTGAGTGTTTTAAATAATACTGTTTGTGCAGGTTTCATCTGTAACAGATCACATTGGAGCACAAGAAAGTGTCGCAAAATCAAATGACCTTGATGATGATGAAGGGGGCGGTCTGGTTGGTGTACAATTTTCTTTTATGATTGAGAAATAAACATCTTGTTTTATTTCTTTTAGCATGATTCCATTTTCAGTCTCCTGCTAAGGCTCGTTGATAGCTAGATTAATTGGAGTTCTGCATCAAATATCTTAGATTAACACAAGAACTTGGCTTCTACAATAGTTAATGTCTACAATAATTTAATGTGCCAGTCTCATAAATGATTACCATGTGTTTAAGTATATTCTTCCCGACAAAATGATAGATAAGTTGTGATTTCAAGACATATTTGTGCTTTCAATTATGGCATGGGTGAGACTAGGCGAGTCTCTCTGCACCTACCTTGAGCGTGTGTTCATGGCAATGTATGGAATTGCCTGTCATTGGCTTCTCTTCCTATCATAATATAAATGAGTTCTGGGAGTAGTAGGTGATCTTTTTGCGATGTATAGGAGGCTAGGCTATGTGGGGTGATTTCAACTTGGTTAGAAGTCCGAGGAGAAATCCTCAAGAGGAAACATAGCGAAAAGTATGTTATGCTTTGATTTTCTTGATTGAAGACCTCTCTTTATTTGATGTCCCCATGATTAATGGAAGATACCCTGGCCAAATGAGGTAGAACCTTCTCCTTATGAAGATGGATTTTTAGTTACTGAAGATTGGATGGTCTTTTAGAGAGTCCAGGTTGGGAGGCTACACACATATTGAGTCCAGAGTTGGTCAAGTATTGAGCCTTTGAATAAATTAATATGTAGAGTGTGCCAAGTATTGAACAACAGTCTCTAGAAGGCACTATAAAAGTAGTAGATTCCTCTAGAATTCTTCTTACACATTCCAGGAGCATCGTCATAGGCTGACCATGGAAACTAATTAGGTGGATGACTTCAGCTGCTACAAACGAAAAAGCTGGATGAAATTGAAACTAATCAACTGTGAAGGAATTGATCGGGTAACATATTGAAACAACATTTGCAAGTTGCAGATATATCGCGATATATTGATTGTTATCTGAATTTTTCTTGTATTTGATGGTGACACATGGAAGGAACACGTTGATATCGTCTGTTGTTGATGACATGTTGGTGTCACTAAGGGAGTGATTCTTCCCTTGGGGTTGATGACCCTGAGTTTTTGACACCTTGCTTAAGCTTCTTCTATACCTCTCACATAGATTGGGGAAAACACAGAAAAAAAGAAAAGAAAATGAGACTCTGGTCATGTGTCATATCATTTATTTGATGACTGTTGAACTATGCGGATTGCAACTTTTCCCCTTTTGATCACTTCCAACTGCATTGCTTTTGGTTACTCCCTGGTTGTATCTTTTGTATATTTCATTACATTTAATAAAATATTTGTTTATTGTCAGAAAAAAATGTTTGCTAATTGTAATGTCGAATTGCAGGCATTGAACGCTCACTCAAGAGCTCTGCTTATGCAGAAGCTTGACCGCACTGGCATTGCTACTAGGTTTGTCTCCCTTTTAGTGTCGTTAAGTTGGGAGATGTCACAGCTTCCCTCTTTTGTACTTCCATCTTCTTTAATGGACATATTTGTTTTCTTTTAAGAAAGAAAGATCAGATCAATGCGAGTTAACTACATGGTTGGTTGCTTCATGGGTTCAGTATTGCAGGGTCTCTTGGAGCTCCAGTGTTGAATGGGTCAGCCTCAAATCAGAGATCTACCAGCTTGCCTCTAAATGGTCAAGCTGCAGTTGCTACTGCACCAGTACTTCCAGCGAATTTTACTCCACCTGTTTTGCAATCTGTTGGAAGTCCTAGTGAATGTCTACTACTGAAAAATATGTTTGATCCATCCACGGAGGTATTGAATACTTGTATTTTCTGTTCTCATCTTTCAAGGTGGATTATTTATACGATAAATTATGTTACAGACAGCACCAGACTTTGACATGGAAATCAAAGAAGACGTTGAAGAGGAGTGTTCTAAATATGGCCATGTTAAACATATATATGTGGATAAGTGAGTACTTTTTTTTCCTTGGTCCTCATAATCAATCATATGACTATTTCAGGTTATATTGTCAAGTGAAAATTAATTTATTTTGGTTAAAATTTATATTTCTGCTTTCTTTTCAAGTCATTGTTATATTTATGGCTATAACACTTAGACAAGATGTTGTCCCCTGCTCTTTCTTGAATTTGCTTCATTCCGTGTTGGAGCATTGACTTGGATCTTTGATCCTCATTTGCAGATACTTCCGGAATAGAGATGGAAAAAAAATACTAATGCCTCCATGGATGGGAGAATCATTTTTTTCCCATTTAATTTTAGAATGGTTATGGAAAGGACTTTCCTACGCTGATGCCTGAATTATTTATTGATATTATAAATTTATAACTATACTTGACCGACAACATTATTTATCTATATATATATATATATATTTGCAAATTAATTATTTAATAAGACTTAAATAAATGGTAAATAGTCTTTTTTGAGATCTCTTCTTTGGTGGGCGATTTTTGTTTTTTTTTGGGGGGGGGGGGGTTGTTAAGGGATTTGGCCTGTGACTGATTTTGGGGCTTTGTGTTGTTTTCTGTTGCCCCTGGGTGACCTTTGGCCGTTTTTGAGTAATCTACCTCCTGTTCTTTCATTCTTCTGAAATCTGAATCAGAAAGCAATTTCTGATAACGATAATAATGATAATAAACCTTATATGTTGTCTCTATTAATTTCTAGTGACACAAAACCATTGGAAGGTTCTCAACATTCAATGAGCAAGTTAATATGCAATGCTTGGACTGTTGGAGTTATGATTGAACATTTAGATAGTAGTTGCAAAATTATTCAAACTTTTACATTATTAACTTGGTTTGGAAACATACCCATATCATCTAGGTTATTACTTCATTTATATGCTAATGTTACCTGATTTTTCCTGTGTAAACATGCTACAAGTCTTGAGATGTGTTGTTTTCATAGTTCAGTTTTCCAATGTTGTAGATTAAAGCTAGGACATGCTTCTACCAAAGCTTAACTCTTCTTTGGCTGTAAGCAGCTTCACTATAAGTCATTACCAAGGTTGCAACTTCCTGCTAGTACTGTCAACATATCTAGAAGTTTATTAACTTTGGGAAATTAACTAATGCAATTATTATTAAGGTCGTCTTTAATATGATGGTACTTGAAGTTAATAGAGAAGAGAGAGACAAGCAAGGGTAGAGAGGATGGTGTAGGAAATTGCTCTTATACTTCATGCAATTGCCAACATATTGTGAGCGACTGCTATTTCTTTTTGGAAATGACATTGTTCTGAAATCTTTTCGAGCCAAAACCTTTGTGCCATTTCTTTATTCCTATTCTCTTATAGGTATTGACCGTATTGTAAGTGATGTACACTCCACCTTATGTCAAAGGATGAAACTTCGAAGTTTACATTATTATGTGATTAAATAGATGTTTATTTCTGTTGAATTTATCATTTTCATCGTTTTTAAATTATTTTGCATTGTGCAGAAATAGCGCCGGATGTGTGTATATGCAATATGATACTGTGGATGCTGCTATAAATGCTCAACGTGCCATGCACATGAGATGGTTTGCAGGCAGACAGATATCGGTCTTGTTCATGGTATGTTCTTAAACTCAAAGGCTCCAATGAGTTCTTGATAGTTCTTAATCCTTTTAGACTGGTTTTTAGGAAAAATAAATTGTCTAGGAGCTTGATTGATGCCCCTTAAAACTCATTCGTGGACTTAGATTTCTTAGTTTCGGCTTCTCAATAGCATCTTGTTCTGTCTTGCAGCAACCGCAGGTGTATGAAGCTAAGTTTAAAGGAGCTTGAATGCTGTTCGTGGTTCTCACCATTTAGGAGAAATCAGAAGATTTCTCTAGCAATCCCTGCATTTTTTTTTTCCTTGGGTGCTGTCAAGTCGGTGTCTAACGTCTCCCCTATCTGTATCAGGTGCTTATAGAAGTACAGGTTAAAAGAGAGTCAATTATCTTGTCAGAAAAGTAAATCGTCCTGTTCTTTATGGTGGATATTGGTACCTATTTCTAATTTCTGCACTATAACATTAGTGTCAAGCGCATACATTTTGTTGGCCTGAATGCATTTAGTGTTGACTTGTGAACATGTCTTTACAATGCATTTTGTAGAACTTTCCCTGACACTTTTTTTGAGTTGGGTTTTCATGCATGTACAGGTATTGACATTTCTGCCAGCTGAAGTCTTTTAATACAATATGTTTACCCCGATAGGAGGAAAAAAGGCCTTATTGTATCGATATTAGGCAAATTCAGTATGAGGATATAAACACTCACATTATGTAGATCGTGGATTGTTTTCTTCTCTCTTTATGAGAACGGTGATTTTCTCCCATTCAGATTGCCGATTATATCCAGGCTTCCCTCTCCCATTTCTCAGTTCACCTTGGAGCAGTCCCTATTGGATTGTTTTGGAGGTTTACTTGTGATGGTTTCTGTCACAGAACCTAG

mRNA sequence

ATGGACTTCGACGAGTACGATTACTTGGAGAAGGCTGTAGAGGATCAGGATGATAGGGACTCGAAGAAGGCAAAGAAGAATGAGAATGACAGGAATGAGAAAGGCAGCAGAAAGAGAGAGGTAGACGAGGAAGCTCAAGCTGGTTCTGGTGGTCGTGAGGATGAGGAGCTGAAGGTCAAGAGGTCGAGAGGCGAGTATGAGAATGGGAAGGACGATAGGGATCACTCGGGCCGAGGGAGGGATCGGCATCGAAGAGATAGAGAGGAAGAAACAGATGTGGGAAAAGAGAGGGATAGAGAGAGGAACCGTACGAGAGAGAGGGGTAGCAGTGAGAAGGAAAGGGATAGAGACAGGGATAGGGAGGAGAGAGATAGAGAAAGACATAAAGAGAAGGAGAGGGAGAGAGACAAGGATAGAAGGGATAAGGAGAGGGATAGAGAGAGACATAAGGAGAAGGAGAGGGAGAGAGACAAGGATAGAAGGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAAGAGAGAGAAAGGAGAGAAAGGGAGAGGAGGGAGCGGGAGAGAGAAGAGGAGAGATCGCGGCGAAGCCGGAGTCGGTCAGTTCGGGAGCGAGAACGTGAAGTTGATGTCAGAGAAAACAGGAGAATGAAGGAAAAGAAAGACATGGTGGAGCCTGAAGCTGATCCAGAGAGGGATCAAAGAACTGTATTTGCTTATCAGATGCCTTTGAAGGCCACTGAGAGAGATGTCTACGAATTCTTTTCAAAAGCAGGAAAGGTGAGAGATGTCCGGCTGATCATGGACAGGAATTCTAGACGGTCAAAAGGAGTTGGGTATGTTGAATTTTATGACGCGATGTCTGTGCCCATGGCTATCGCTCTCTCTGGTCAACTACTTCTTGGCCAACCTGTAATGGTTAAACCTTCAGAGGCTGAAAAGAATCTTGTTCAATCAAATACGTCAGGAGCCTCGGGTGCAGGGCCATATGGAGCAGTAGACAGGAAACTTTATGTTGGAAATTTACATTTTAACATGACTGAGACTCACCTTAGAGAGATTTTTGAAGCATTTGGTCCTGTCGAGCTCGTGCAACTACCTCTTGACCTTGAGTCAGGTCACTGCAAGGGTTTTGGATTTGTTCAAGTGGTTTGCTCATCTAGAACATGCAAAGCAGCTCAAAGCTTGAATGGAAAATTAGAAATTGCTGGCCGAACCATCAAGGTTTCATCTGTAACAGATCACATTGGAGCACAAGAAAGTGTCGCAAAATCAAATGACCTTGATGATGATGAAGGGGGCGGTCTGGCATTGAACGCTCACTCAAGAGCTCTGCTTATGCAGAAGCTTGACCGCACTGGCATTGCTACTAGTATTGCAGGGTCTCTTGGAGCTCCAGTGTTGAATGGGTCAGCCTCAAATCAGAGATCTACCAGCTTGCCTCTAAATGGTCAAGCTGCAGTTGCTACTGCACCAGTACTTCCAGCGAATTTTACTCCACCTGTTTTGCAATCTGTTGGAAGTCCTAGTGAATGTCTACTACTGAAAAATATGTTTGATCCATCCACGGAGACAGCACCAGACTTTGACATGGAAATCAAAGAAGACGTTGAAGAGGAGTGTTCTAAATATGGCCATGTTAAACATATATATGTGGATAAAAATAGCGCCGGATGTGTGTATATGCAATATGATACTGTGGATGCTGCTATAAATGCTCAACGTGCCATGCACATGAGATGGTTTGCAGGCAGACAGATATCGGTCTTGTTCATGATTGCCGATTATATCCAGGCTTCCCTCTCCCATTTCTCAGTTCACCTTGGAGCAGTCCCTATTGGATTGTTTTGGAGGTTTACTTGTGATGGTTTCTGTCACAGAACCTAG

Coding sequence (CDS)

ATGGACTTCGACGAGTACGATTACTTGGAGAAGGCTGTAGAGGATCAGGATGATAGGGACTCGAAGAAGGCAAAGAAGAATGAGAATGACAGGAATGAGAAAGGCAGCAGAAAGAGAGAGGTAGACGAGGAAGCTCAAGCTGGTTCTGGTGGTCGTGAGGATGAGGAGCTGAAGGTCAAGAGGTCGAGAGGCGAGTATGAGAATGGGAAGGACGATAGGGATCACTCGGGCCGAGGGAGGGATCGGCATCGAAGAGATAGAGAGGAAGAAACAGATGTGGGAAAAGAGAGGGATAGAGAGAGGAACCGTACGAGAGAGAGGGGTAGCAGTGAGAAGGAAAGGGATAGAGACAGGGATAGGGAGGAGAGAGATAGAGAAAGACATAAAGAGAAGGAGAGGGAGAGAGACAAGGATAGAAGGGATAAGGAGAGGGATAGAGAGAGACATAAGGAGAAGGAGAGGGAGAGAGACAAGGATAGAAGGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAAGAGAGAGAAAGGAGAGAAAGGGAGAGGAGGGAGCGGGAGAGAGAAGAGGAGAGATCGCGGCGAAGCCGGAGTCGGTCAGTTCGGGAGCGAGAACGTGAAGTTGATGTCAGAGAAAACAGGAGAATGAAGGAAAAGAAAGACATGGTGGAGCCTGAAGCTGATCCAGAGAGGGATCAAAGAACTGTATTTGCTTATCAGATGCCTTTGAAGGCCACTGAGAGAGATGTCTACGAATTCTTTTCAAAAGCAGGAAAGGTGAGAGATGTCCGGCTGATCATGGACAGGAATTCTAGACGGTCAAAAGGAGTTGGGTATGTTGAATTTTATGACGCGATGTCTGTGCCCATGGCTATCGCTCTCTCTGGTCAACTACTTCTTGGCCAACCTGTAATGGTTAAACCTTCAGAGGCTGAAAAGAATCTTGTTCAATCAAATACGTCAGGAGCCTCGGGTGCAGGGCCATATGGAGCAGTAGACAGGAAACTTTATGTTGGAAATTTACATTTTAACATGACTGAGACTCACCTTAGAGAGATTTTTGAAGCATTTGGTCCTGTCGAGCTCGTGCAACTACCTCTTGACCTTGAGTCAGGTCACTGCAAGGGTTTTGGATTTGTTCAAGTGGTTTGCTCATCTAGAACATGCAAAGCAGCTCAAAGCTTGAATGGAAAATTAGAAATTGCTGGCCGAACCATCAAGGTTTCATCTGTAACAGATCACATTGGAGCACAAGAAAGTGTCGCAAAATCAAATGACCTTGATGATGATGAAGGGGGCGGTCTGGCATTGAACGCTCACTCAAGAGCTCTGCTTATGCAGAAGCTTGACCGCACTGGCATTGCTACTAGTATTGCAGGGTCTCTTGGAGCTCCAGTGTTGAATGGGTCAGCCTCAAATCAGAGATCTACCAGCTTGCCTCTAAATGGTCAAGCTGCAGTTGCTACTGCACCAGTACTTCCAGCGAATTTTACTCCACCTGTTTTGCAATCTGTTGGAAGTCCTAGTGAATGTCTACTACTGAAAAATATGTTTGATCCATCCACGGAGACAGCACCAGACTTTGACATGGAAATCAAAGAAGACGTTGAAGAGGAGTGTTCTAAATATGGCCATGTTAAACATATATATGTGGATAAAAATAGCGCCGGATGTGTGTATATGCAATATGATACTGTGGATGCTGCTATAAATGCTCAACGTGCCATGCACATGAGATGGTTTGCAGGCAGACAGATATCGGTCTTGTTCATGATTGCCGATTATATCCAGGCTTCCCTCTCCCATTTCTCAGTTCACCTTGGAGCAGTCCCTATTGGATTGTTTTGGAGGTTTACTTGTGATGGTTTCTGTCACAGAACCTAG

Protein sequence

MDFDEYDYLEKAVEDQDDRDSKKAKKNENDRNEKGSRKREVDEEAQAGSGGREDEELKVKRSRGEYENGKDDRDHSGRGRDRHRRDREEETDVGKERDRERNRTRERGSSEKERDRDRDREERDRERHKEKERERDKDRRDKERDRERHKEKERERDKDRREKEKEKEKEKEKERERRERERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQVVCSSRTCKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKSNDLDDDEGGGLALNAHSRALLMQKLDRTGIATSIAGSLGAPVLNGSASNQRSTSLPLNGQAAVATAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGHVKHIYVDKNSAGCVYMQYDTVDAAINAQRAMHMRWFAGRQISVLFMIADYIQASLSHFSVHLGAVPIGLFWRFTCDGFCHRT

Homology

[Close]

BLAST of Sgr026390 vs. NCBI nr
Match: XP_008440993.1 (PREDICTED: RNA-binding protein 39 isoform X4 [Cucumis melo])

HSP 1 Score: 951.8 bits (2459), Expect = 2.9e-273
Identity = 546/590 (92.54%), Postives = 570/590 (96.61%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDDRDSKKAKKNENDRNEKGSRKREVDEEAQAGSGGREDEELKVK 60
           MDFDEYDYLEKAVE+QDDR++KK K++E++RNEK +RKREVDEE  AGSGGREDEE+KVK
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSESERNEKSTRKREVDEE--AGSGGREDEEVKVK 60

Query: 61  RSRGEYENGKDDRDHSGRGRDRHRRDREEETDVGKERDRERNRTRERGSSEKERDRDRDR 120
           RSR E+ENGK+DRDHSGR RDRHRRDREEETD GKERD+ERNRTRERGSSEKERDRDRDR
Sbjct: 61  RSRSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDR 120

Query: 121 EERDRERHKEKERERDKDRRDKERDRERHKEKERERDKDRREKEKEKEKEKEKERERRER 180
           EERDR+RHKEKERERDKDR+DKERDRERHKEK+RERDKDRR+KEKE+E+EKEKERERR+R
Sbjct: 121 EERDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEKEREREKEKERERRDR 180

Query: 181 ERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQM 240
           ERREREREEERSRRSRSRSVREREREVDVRE+RRMKEKKD  EPEADPERDQRTVFAYQM
Sbjct: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTAEPEADPERDQRTVFAYQM 240

Query: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300
           PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG
Sbjct: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300

Query: 301 QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360
           QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE
Sbjct: 301 QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360

Query: 361 LVQLPLDLESGHCKGFGFVQVVCSSRTCKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV 420
           LVQLPLDLESGHCKGFGFVQ        KAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV
Sbjct: 361 LVQLPLDLESGHCKGFGFVQ-FAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV 420

Query: 421 AKSNDLDDDEGGGLALNAHSRALLMQKLDRTGIATSIAGSLGAPVLNGSASNQRSTSLPL 480
           AKSNDLDDDEGGGLALNA SRALLMQKLDRTGIATSIAGSLGAPVLNGSA NQRSTSLPL
Sbjct: 421 AKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPL 480

Query: 481 NGQAAVATAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS 540
           NGQAAVA APVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS
Sbjct: 481 NGQAAVA-APVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS 540

Query: 541 KYGHVKHIYVDKNSAGCVYMQYDTVDAAINAQRAMHMRWFAGRQISVLFM 591
           KYGHVKHIYVDKNSAGCVY+QYDTV+AA+NAQRAMH+RWFAGRQISVLFM
Sbjct: 541 KYGHVKHIYVDKNSAGCVYLQYDTVEAAVNAQRAMHLRWFAGRQISVLFM 586

[Close]

BLAST of Sgr026390 vs. NCBI nr
Match: XP_008440991.1 (PREDICTED: RNA-binding protein 39 isoform X2 [Cucumis melo])

HSP 1 Score: 946.8 bits (2446), Expect = 9.4e-272
Identity = 546/592 (92.23%), Postives = 570/592 (96.28%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDDRDSKKAKKNENDRNEKGSRKREVDEEAQAGSGGREDEELKVK 60
           MDFDEYDYLEKAVE+QDDR++KK K++E++RNEK +RKREVDEE  AGSGGREDEE+KVK
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSESERNEKSTRKREVDEE--AGSGGREDEEVKVK 60

Query: 61  RSRGEYENGKDDRDHSGRGRDRHRRDREEETDVGKERDRERNRTRERGSSEKERDRDRDR 120
           RSR E+ENGK+DRDHSGR RDRHRRDREEETD GKERD+ERNRTRERGSSEKERDRDRDR
Sbjct: 61  RSRSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDR 120

Query: 121 EERDRERHKEKERERDKDRRDKERDRERHKEKERERDKDRREKEKEKEKEKEKERERRER 180
           EERDR+RHKEKERERDKDR+DKERDRERHKEK+RERDKDRR+KEKE+E+EKEKERERR+R
Sbjct: 121 EERDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEKEREREKEKERERRDR 180

Query: 181 ERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQM 240
           ERREREREEERSRRSRSRSVREREREVDVRE+RRMKEKKD  EPEADPERDQRTVFAYQM
Sbjct: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTAEPEADPERDQRTVFAYQM 240

Query: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300
           PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG
Sbjct: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300

Query: 301 QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360
           QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE
Sbjct: 301 QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360

Query: 361 LVQLPLDLESGHCKGFGFVQVVCSSRTCKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV 420
           LVQLPLDLESGHCKGFGFVQ        KAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV
Sbjct: 361 LVQLPLDLESGHCKGFGFVQ-FAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV 420

Query: 421 AKSNDLDDDEGGGL--ALNAHSRALLMQKLDRTGIATSIAGSLGAPVLNGSASNQRSTSL 480
           AKSNDLDDDEGGGL  ALNA SRALLMQKLDRTGIATSIAGSLGAPVLNGSA NQRSTSL
Sbjct: 421 AKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSL 480

Query: 481 PLNGQAAVATAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEE 540
           PLNGQAAVA APVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEE
Sbjct: 481 PLNGQAAVA-APVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEE 540

Query: 541 CSKYGHVKHIYVDKNSAGCVYMQYDTVDAAINAQRAMHMRWFAGRQISVLFM 591
           CSKYGHVKHIYVDKNSAGCVY+QYDTV+AA+NAQRAMH+RWFAGRQISVLFM
Sbjct: 541 CSKYGHVKHIYVDKNSAGCVYLQYDTVEAAVNAQRAMHLRWFAGRQISVLFM 588

[Close]

BLAST of Sgr026390 vs. NCBI nr
Match: XP_038881757.1 (RNA-binding protein 39 isoform X2 [Benincasa hispida])

HSP 1 Score: 946.8 bits (2446), Expect = 9.4e-272
Identity = 546/590 (92.54%), Postives = 568/590 (96.27%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDDRDSKKAKKNENDRNEKGSRKREVDEEAQAGSGGREDEELKVK 60
           MDFDEYDYLEKAVE+QDDR++KK KK+E++RNEK SRKREVDEE  AGSGGREDEE+KVK
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKKSESERNEKSSRKREVDEE--AGSGGREDEEVKVK 60

Query: 61  RSRGEYENGKDDRDHSGRGRDRHRRDREEETDVGKERDRERNRTRERGSSEKERDRDRDR 120
           RSR E+ENGK+D+DHSGRGRDRHRRDREEE D GKERDRERNRTRERGSSEKERDRDRDR
Sbjct: 61  RSRSEHENGKEDKDHSGRGRDRHRRDREEEADGGKERDRERNRTRERGSSEKERDRDRDR 120

Query: 121 EERDRERHKEKERERDKDRRDKERDRERHKEKERERDKDRREKEKEKEKEKEKERERRER 180
           EERDR+RHKEKERERDKDRRDK+RDRERHKEK+RERDKDRR  ++++E+EKEKERERRER
Sbjct: 121 EERDRDRHKEKERERDKDRRDKDRDRERHKEKDRERDKDRR--DRDREREKEKERERRER 180

Query: 181 ERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQM 240
           E+REREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQM
Sbjct: 181 EKREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQM 240

Query: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300
           PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG
Sbjct: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300

Query: 301 QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360
           QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE
Sbjct: 301 QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360

Query: 361 LVQLPLDLESGHCKGFGFVQVVCSSRTCKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV 420
           LVQLPLDLESGHCKGFGFVQ        KAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV
Sbjct: 361 LVQLPLDLESGHCKGFGFVQ-FAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV 420

Query: 421 AKSNDLDDDEGGGLALNAHSRALLMQKLDRTGIATSIAGSLGAPVLNGSASNQRSTSLPL 480
           AKSNDLDDDEGGGLALNA SRALLMQKLDRTGIATSIAGSLGAPVLNGSA NQRSTSLPL
Sbjct: 421 AKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPL 480

Query: 481 NGQAAVATAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS 540
           NGQ AVA APVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS
Sbjct: 481 NGQVAVA-APVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS 540

Query: 541 KYGHVKHIYVDKNSAGCVYMQYDTVDAAINAQRAMHMRWFAGRQISVLFM 591
           KYG VKHIYVDKNSAGCVY+QYDTV+AAINAQRAMH+RWFAGRQISVLFM
Sbjct: 541 KYGRVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFM 584

[Close]

BLAST of Sgr026390 vs. NCBI nr
Match: XP_004141977.1 (RNA-binding protein 39 isoform X3 [Cucumis sativus] >KGN48400.1 hypothetical protein Csa_003011 [Cucumis sativus])

HSP 1 Score: 944.1 bits (2439), Expect = 6.1e-271
Identity = 542/590 (91.86%), Postives = 569/590 (96.44%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDDRDSKKAKKNENDRNEKGSRKREVDEEAQAGSGGREDEELKVK 60
           MDFDEYDYLEKAVE+QDDR++KK K+++++RNEK +RKREVDEE  AGSGGREDEE+KVK
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEE--AGSGGREDEEVKVK 60

Query: 61  RSRGEYENGKDDRDHSGRGRDRHRRDREEETDVGKERDRERNRTRERGSSEKERDRDRDR 120
           RSR E+ENGK+DRDHSGR RDRHRRDREEETD GKERD+ERNRTRERGSSEKER+RDRDR
Sbjct: 61  RSRSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDR 120

Query: 121 EERDRERHKEKERERDKDRRDKERDRERHKEKERERDKDRREKEKEKEKEKEKERERRER 180
           EERDR+RHKEKERERDKDR+DKERDRERHKEK+RERDKDRR+KE+E+EKEKEKERERR+R
Sbjct: 121 EERDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERRDR 180

Query: 181 ERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQM 240
           ERREREREEERSRRSRSRSVREREREVDVRE+RRMKEKKD  EPEADPERDQRTVFAYQM
Sbjct: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQM 240

Query: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300
           PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG
Sbjct: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300

Query: 301 QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360
           QPVMVKPSEAEKNLVQSNT+GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE
Sbjct: 301 QPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360

Query: 361 LVQLPLDLESGHCKGFGFVQVVCSSRTCKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV 420
           LVQLPLDLESGHCKGFGFVQ        KAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV
Sbjct: 361 LVQLPLDLESGHCKGFGFVQ-FAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV 420

Query: 421 AKSNDLDDDEGGGLALNAHSRALLMQKLDRTGIATSIAGSLGAPVLNGSASNQRSTSLPL 480
           AKSNDLDDDEGGGLALNA SRALLMQKLDRTGIATSIAGSLGAPVLNGSA NQRSTSLP+
Sbjct: 421 AKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPV 480

Query: 481 NGQAAVATAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS 540
           NGQAAVA APVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS
Sbjct: 481 NGQAAVA-APVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS 540

Query: 541 KYGHVKHIYVDKNSAGCVYMQYDTVDAAINAQRAMHMRWFAGRQISVLFM 591
           KYG VKHIYVDKNSAGCVY+QYDTV+AAINAQRAMH+RWFAGRQISVLFM
Sbjct: 541 KYGRVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFM 586

[Close]

BLAST of Sgr026390 vs. NCBI nr
Match: XP_022133416.1 (RNA-binding protein 39 isoform X2 [Momordica charantia])

HSP 1 Score: 940.3 bits (2429), Expect = 8.8e-270
Identity = 548/605 (90.58%), Postives = 567/605 (93.72%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDDRDSKKAKKNENDRNEKGSRKREVDEEAQAGSGGREDEELKVK 60
           MDFDEYDYLEKAVEDQD+RDSKKAKKNE++RNEK SRKREVDEE   GSGGREDEE+KVK
Sbjct: 1   MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEE--DGSGGREDEEVKVK 60

Query: 61  RSRGEYENGKDDRDHSGRGRDRHRRDREEETDVGKERDRERNRTRERGSSEKERDRDRDR 120
           RSR E+ENGK+DRD SGRGRDRHRRDREEETD GK    ERNRTRERGSSEKERDRDR+R
Sbjct: 61  RSRSEHENGKEDRDQSGRGRDRHRRDREEETDAGK----ERNRTRERGSSEKERDRDRNR 120

Query: 121 EERDRERHKEKERERDKDRRDKERDRERHKEKERERDKDRR--------EKEKEKEKEKE 180
           E+RDRERHKEKERERD+DRRDK+RDRERHKEKERERDKDRR        EKEKEKEKEKE
Sbjct: 121 EDRDRERHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKE 180

Query: 181 KERERRERERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQ 240
           KERERR+RERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQ
Sbjct: 181 KERERRDRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQ 240

Query: 241 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIA 300
           RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIA
Sbjct: 241 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIA 300

Query: 301 LSGQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREI 360
           LSGQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREI
Sbjct: 301 LSGQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREI 360

Query: 361 FEAFGPVELVQLPLDLESGHCKGFGFVQVVCSSRTCKAAQSLNGKLEIAGRTIKVSSVTD 420
           FEAFGPVELVQLPLDLESGHCKGFGFVQ        K+AQSLNGKLE+AGRTIKVSSVTD
Sbjct: 361 FEAFGPVELVQLPLDLESGHCKGFGFVQ-FAHLEHAKSAQSLNGKLELAGRTIKVSSVTD 420

Query: 421 HIGAQESVAKSNDLDDDEGGGLALNAHSRALLMQKLDRTGIATSIAGSLGAPVLNGSASN 480
           HIGAQESVAKSNDLDDDEGGGLALNA SRALLMQKLDRTGIATSIAGSLGAPVLNGSA N
Sbjct: 421 HIGAQESVAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPN 480

Query: 481 QRSTSLPLNGQAAVATAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIK 540
           QRS+SLPLNGQAAVA   VLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIK
Sbjct: 481 QRSSSLPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIK 540

Query: 541 EDVEEECSKYGHVKHIYVDKNSAGCVYMQYDTVDAAINAQRAMHMRWFAGRQISVLFMIA 598
           EDVEEECSKYG VKHIYVDKNSAGCVY+QYD V+AAINAQRAMH+RWFAGRQISVLFM +
Sbjct: 541 EDVEEECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQS 598

[Close]

BLAST of Sgr026390 vs. ExPASy Swiss-Prot
Match: Q5RC80 (RNA-binding protein 39 OS=Pongo abelii OX=9601 GN=RBM39 PE=2 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 9.0e-60
Identity = 202/501 (40.32%), Postives = 275/501 (54.89%), Query Frame = 0


Query: 128 HKEKERERDKDR-RDKERDRERHKEKERERDKDRREKEKEKEKEKEKERERRERERRERE 187
           H+E+ ++R K + R +  +R+R K KER+R +DR   E++K K +E++R R +  RR R 
Sbjct: 28  HEERSKKRKKSKSRSRSHERKRSKSKERKRSRDR---ERKKSKSRERKRSRSKERRRSRS 87

Query: 188 REEERSRRSRSRSV-------------------------REREREVDVRENRRMKEKKDM 247
           R  +R  R R RS                          R R +    ++   ++E  D 
Sbjct: 88  RSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDN 147

Query: 248 VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEF 307
           + PE   ERD RTVF  Q+  +   RD+ EFFS  GKVRDVR+I DRNSRRSKG+ YVEF
Sbjct: 148 LTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEF 207

Query: 308 YDAMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSGASGAGPYGAVDRKLYVGN 367
            D  SVP+AI L+GQ +LG P++V+ S+AEKN     +N      AGP      +LYVG+
Sbjct: 208 VDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGP-----MRLYVGS 267

Query: 368 LHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQVVCSSRTCKAAQSLNGKLE 427
           LHFN+TE  LR IFE FG +E +QL +D E+G  KG+GF+    S    KA + LNG  E
Sbjct: 268 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FE 327

Query: 428 IAGRTIKVSSVTDHIGAQESVAKSNDLDDDEGGGLALNAHSRALLMQKL-DRTGI----- 487
           +AGR +KV  VT+   A  S +   D D+ E  G+ L    R  LM +L + TG+     
Sbjct: 328 LAGRPMKVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPA 387

Query: 488 ---ATSIAGSLGAPVLNGSASNQRSTSLPLNGQAAVATAPVLPANFTPPVLQSVGSPSEC 547
              A  ++GSL        A  Q   S      A  A A V P              ++C
Sbjct: 388 AQQALQMSGSL---AFGAVADLQTRLSQQTEASALAAAASVQPL------------ATQC 447

Query: 548 LLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGHVKHIYVDKNSA-GCVYMQYDTVDAAI 591
             L NMF+P TE    +D EIK+DV EEC+K+G V HIYVDKNSA G VY++  ++ AAI
Sbjct: 448 FQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAI 500

[Close]

BLAST of Sgr026390 vs. ExPASy Swiss-Prot
Match: Q14498 (RNA-binding protein 39 OS=Homo sapiens OX=9606 GN=RBM39 PE=1 SV=2)

HSP 1 Score: 229.6 bits (584), Expect = 1.0e-58
Identity = 204/502 (40.64%), Postives = 277/502 (55.18%), Query Frame = 0


Query: 128 HKEKERERDKDR-RDKERDRERHKEKERERDKDRREKEKEKEKEKEKERERRERERRERE 187
           H+E+ ++R K + R +  +R+R K KER+R +DR   E++K K +E++R R +  RR R 
Sbjct: 28  HEERSKKRKKSKSRSRSHERKRSKSKERKRSRDR---ERKKSKSRERKRSRSKERRRSRS 87

Query: 188 REEERSRRSRSRSV-------------------------REREREVDVRENRRMKEKKDM 247
           R  +R  R R RS                          R R +    ++   ++E  D 
Sbjct: 88  RSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDN 147

Query: 248 VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEF 307
           + PE   ERD RTVF  Q+  +   RD+ EFFS  GKVRDVR+I DRNSRRSKG+ YVEF
Sbjct: 148 LTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEF 207

Query: 308 YDAMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSGASGAGPYGAVDRKLYVGN 367
            D  SVP+AI L+GQ +LG P++V+ S+AEKN     +N      AGP      +LYVG+
Sbjct: 208 VDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGP-----MRLYVGS 267

Query: 368 LHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQVVCSSRTCKAAQSLNGKLE 427
           LHFN+TE  LR IFE FG +E +QL +D E+G  KG+GF+    S    KA + LNG  E
Sbjct: 268 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FE 327

Query: 428 IAGRTIKVSSVTDHIGAQESVAKSNDLDDDEGGGLALNAHSRALLMQKL-DRTGI----- 487
           +AGR +KV  VT+   A  S +   D D+ E  G+ L    R  LM +L + TG+     
Sbjct: 328 LAGRPMKVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPA 387

Query: 488 ---ATSIAGSLG-APVLNGSASNQRSTSLPLNGQAAVATAPVLPANFTPPVLQSVGSPSE 547
              A  ++GSL    V   S      T L    Q   A+A    A+  P   Q       
Sbjct: 388 AQQALQMSGSLAFGAVAEFSFVIDLQTRL---SQQTEASALAAAASVQPLATQ------- 447

Query: 548 CLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGHVKHIYVDKNSA-GCVYMQYDTVDAA 591
           C  L NMF+P TE    +D EIK+DV EEC+K+G V HIYVDKNSA G VY++  ++ AA
Sbjct: 448 CFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAA 506

[Close]

BLAST of Sgr026390 vs. ExPASy Swiss-Prot
Match: Q8VH51 (RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2)

HSP 1 Score: 229.6 bits (584), Expect = 1.0e-58
Identity = 204/502 (40.64%), Postives = 277/502 (55.18%), Query Frame = 0


Query: 128 HKEKERERDKDR-RDKERDRERHKEKERERDKDRREKEKEKEKEKEKERERRERERRERE 187
           H+E+ ++R K + R +  +R+R K KER+R +DR   E++K K +E++R R +  RR R 
Sbjct: 28  HEERSKKRKKSKSRSRSHERKRSKSKERKRSRDR---ERKKSKSRERKRSRSKERRRSRS 87

Query: 188 REEERSRRSRSRSV-------------------------REREREVDVRENRRMKEKKDM 247
           R  +R  R R RS                          R R +    ++   ++E  D 
Sbjct: 88  RSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDN 147

Query: 248 VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEF 307
           + PE   ERD RTVF  Q+  +   RD+ EFFS  GKVRDVR+I DRNSRRSKG+ YVEF
Sbjct: 148 LTPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEF 207

Query: 308 YDAMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSGASGAGPYGAVDRKLYVGN 367
            D  SVP+AI L+GQ +LG P++V+ S+AEKN     +N      AGP      +LYVG+
Sbjct: 208 VDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGP-----MRLYVGS 267

Query: 368 LHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQVVCSSRTCKAAQSLNGKLE 427
           LHFN+TE  LR IFE FG +E +QL +D E+G  KG+GF+    S    KA + LNG  E
Sbjct: 268 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FE 327

Query: 428 IAGRTIKVSSVTDHIGAQESVAKSNDLDDDEGGGLALNAHSRALLMQKL-DRTGI----- 487
           +AGR +KV  VT+   A  S +   D D+ E  G+ L    R  LM +L + TG+     
Sbjct: 328 LAGRPMKVGHVTERTDA-SSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPA 387

Query: 488 ---ATSIAGSLG-APVLNGSASNQRSTSLPLNGQAAVATAPVLPANFTPPVLQSVGSPSE 547
              A  ++GSL    V   S      T L    Q   A+A    A+  P   Q       
Sbjct: 388 AQQALQMSGSLAFGAVAEFSFVIDLQTRL---SQQTEASALAAAASVQPLATQ------- 447

Query: 548 CLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGHVKHIYVDKNSA-GCVYMQYDTVDAA 591
           C  L NMF+P TE    +D EIK+DV EEC+K+G V HIYVDKNSA G VY++  ++ AA
Sbjct: 448 CFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAA 506

[Close]

BLAST of Sgr026390 vs. ExPASy Swiss-Prot
Match: Q86U06 (Probable RNA-binding protein 23 OS=Homo sapiens OX=9606 GN=RBM23 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 7.2e-25
Identity = 151/446 (33.86%), Postives = 230/446 (51.57%), Query Frame = 0


Query: 83  HRRDREEETDVGKERDRERNRTRERGSSEKERDRDR---DREERDRERHKEKERERDKDR 142
           ++++ +E+     ++D   N T    +S  E        +  ++ R R   K R+R   +
Sbjct: 18  YKKEEDEQQRKEVKKDYPSNTTSSTSNSGNETSGSSTIGETSKKKRSRSHNKSRDR---K 77

Query: 143 RDKERDRERHKEK-ERERDKDRREKEKEKEKEKEKERERRERERREREREEERSRRSRSR 202
           R + RDR+R++ +  R R   R+ + + +  ++    E R R+ R  +R   RS    + 
Sbjct: 78  RSRSRDRDRYRRRNSRSRSPGRQCRHRSRSWDRRHGSESRSRDHRREDRVHYRSPPLATG 137

Query: 203 SVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGK 262
                 +    RE   ++E  D + PE   ERD RTVF  Q+  +   RD+ +FFS  GK
Sbjct: 138 YRYGHSKSPHFREKSPVREPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGK 197

Query: 263 VRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQ 322
           VRDVR+I DRNSRRSKG+ YVEF +  SVP+AI L+GQ LLG P++V+ S+AEKN     
Sbjct: 198 VRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAM 257

Query: 323 SNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGF 382
           +N       GP      +LYVG+LHFN+TE  LR IFE FG ++ + L  D ++G  KG+
Sbjct: 258 ANNLQKGNGGP-----MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGY 317

Query: 383 GFVQVVCSSRTCKAAQSLNGKLEIAGRTIKVSSVTDHI-GAQESVAKSNDLDDDEGGGLA 442
           GF+    S    +A + LNG  E+AGR ++V  VT+ + G  +      D + D G    
Sbjct: 318 GFITFSDSECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG---- 377

Query: 443 LNAHSRALLMQKLDRTGIATSIAGSLGAPVLNGSASNQRSTSLPLNGQAAVATAPVLPAN 502
            +A  R  LM KL     A      L +     +A+  ++ +L LNG  AV    + PA 
Sbjct: 378 -SAGGRFQLMAKL-----AEGAGIQLPSTAAAAAAAAAQAAALQLNG--AVPLGALNPAA 437

Query: 503 FTPPVLQSVGSPSECLLLKNMFDPST 522
            T  +  ++   S+C  L ++F P T
Sbjct: 438 LT-ALSPALNLASQCFQLSSLFTPQT 438

[Close]

BLAST of Sgr026390 vs. ExPASy Swiss-Prot
Match: O13845 (RNA-binding protein rsd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rsd1 PE=1 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 2.7e-24
Identity = 173/576 (30.03%), Postives = 252/576 (43.75%), Query Frame = 0


Query: 18  DRDSKKAKKNENDRNEKGSRKREVDEEAQAGSGGREDEELKVKRSRGEYENGKDDRDHSG 77
           DR  K   KN        S  R        G       +   +R    Y +       S 
Sbjct: 57  DRSFKPVSKNYE------SEGRLTPPPVSMGYRYARSSKQSFQREDSGYNDDVVTNSSSH 116

Query: 78  RGRDRHRRDREEETDVGKERDRERNRTRERGSSEKERDRDRDREERDRERHKEKERERDK 137
           R    HRR     +D G       +      S    R RDRDR  R             +
Sbjct: 117 RTPRHHRRSYSPRSDYGSRSPSPHSSVDSHQSRSPVRSRDRDRSSRS-----------SR 176

Query: 138 DRRDKERDRERHKEKERERDKDRREKEKEKEKEKEKERERRERE-RREREREEERS-RRS 197
            R    R R R+ +  R      R     +  E+   R  R  +   E  R+++RS  R 
Sbjct: 177 SRHPSSRSRHRYDDYSRSPPYSSRHSRSRRRYEERSSRSSRAHDYDYEDLRDDDRSHERK 236

Query: 198 RSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDVYEFFSK 257
           RSRS R RER   + E                 ERD+RTVF  Q+  + T R++Y+FF +
Sbjct: 237 RSRS-RPRERSSKLSEE----------------ERDRRTVFVSQLANRLTSRELYDFFEQ 296

Query: 258 AGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLV 317
           AG VRD +++ D+ S RSKGV YVEF    SV  AIALSG+ LLG PV+V+ +EAEKN  
Sbjct: 297 AGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAAIALSGKRLLGLPVIVQLTEAEKNRK 356

Query: 318 QSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKG 377
               +  + A        +L V N+HFN+T+  ++ IFE FG +E V L  D +    KG
Sbjct: 357 AREAAELARAASAEIPFHRLCVSNIHFNLTDEDVKAIFEPFGDIEFVHLQRD-DQNRSKG 416

Query: 378 FGFVQVVCSSRTCKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKSNDLDD-----DE 437
           FG++Q         A + +NG  ++AGR ++V    D    + + +     D+     + 
Sbjct: 417 FGYIQYRNPISARNALEKMNG-FDLAGRNMRVCLGNDKFTTETTSSMLKRFDETLARQER 476

Query: 438 GGGLALNAHSRALLMQKLDRTGIATSIAGSLGAPVLNGSASNQRSTSLPLNGQAAVATAP 497
                 N  S     Q   R     S       P+       + + S  ++  + + + P
Sbjct: 477 SQPSQRNGGSSTYESQDY-REAAPLSPTEEESRPITRDELMKKLARSEDISDNSKLVSEP 536

Query: 498 VLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEEC-SKYGHVKHIY 557
                  PP+       S C LL+NMF+P+ ET+P++  E+++DV+EEC  KYG V HI 
Sbjct: 537 ------EPPI------RSRCALLENMFNPAEETSPNWVQELEQDVKEECDEKYGKVVHIA 583

Query: 558 VDKNSAGCVYMQYDTVDAAINAQRAMHMRWFAGRQI 586
           V  N  G ++++++  D A  A   +H RWF GR I
Sbjct: 597 VVPNELGQIFVKFENADFAEKAITGLHQRWFGGRTI 583

[Close]

BLAST of Sgr026390 vs. ExPASy TrEMBL
Match: A0A1S3B2E3 (RNA-binding protein 39 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103485239 PE=4 SV=1)

HSP 1 Score: 951.8 bits (2459), Expect = 1.4e-273
Identity = 546/590 (92.54%), Postives = 570/590 (96.61%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDDRDSKKAKKNENDRNEKGSRKREVDEEAQAGSGGREDEELKVK 60
           MDFDEYDYLEKAVE+QDDR++KK K++E++RNEK +RKREVDEE  AGSGGREDEE+KVK
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSESERNEKSTRKREVDEE--AGSGGREDEEVKVK 60

Query: 61  RSRGEYENGKDDRDHSGRGRDRHRRDREEETDVGKERDRERNRTRERGSSEKERDRDRDR 120
           RSR E+ENGK+DRDHSGR RDRHRRDREEETD GKERD+ERNRTRERGSSEKERDRDRDR
Sbjct: 61  RSRSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDR 120

Query: 121 EERDRERHKEKERERDKDRRDKERDRERHKEKERERDKDRREKEKEKEKEKEKERERRER 180
           EERDR+RHKEKERERDKDR+DKERDRERHKEK+RERDKDRR+KEKE+E+EKEKERERR+R
Sbjct: 121 EERDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEKEREREKEKERERRDR 180

Query: 181 ERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQM 240
           ERREREREEERSRRSRSRSVREREREVDVRE+RRMKEKKD  EPEADPERDQRTVFAYQM
Sbjct: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTAEPEADPERDQRTVFAYQM 240

Query: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300
           PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG
Sbjct: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300

Query: 301 QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360
           QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE
Sbjct: 301 QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360

Query: 361 LVQLPLDLESGHCKGFGFVQVVCSSRTCKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV 420
           LVQLPLDLESGHCKGFGFVQ        KAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV
Sbjct: 361 LVQLPLDLESGHCKGFGFVQ-FAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV 420

Query: 421 AKSNDLDDDEGGGLALNAHSRALLMQKLDRTGIATSIAGSLGAPVLNGSASNQRSTSLPL 480
           AKSNDLDDDEGGGLALNA SRALLMQKLDRTGIATSIAGSLGAPVLNGSA NQRSTSLPL
Sbjct: 421 AKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPL 480

Query: 481 NGQAAVATAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS 540
           NGQAAVA APVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS
Sbjct: 481 NGQAAVA-APVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS 540

Query: 541 KYGHVKHIYVDKNSAGCVYMQYDTVDAAINAQRAMHMRWFAGRQISVLFM 591
           KYGHVKHIYVDKNSAGCVY+QYDTV+AA+NAQRAMH+RWFAGRQISVLFM
Sbjct: 541 KYGHVKHIYVDKNSAGCVYLQYDTVEAAVNAQRAMHLRWFAGRQISVLFM 586

[Close]

BLAST of Sgr026390 vs. ExPASy TrEMBL
Match: A0A1S3B1Y4 (RNA-binding protein 39 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485239 PE=4 SV=1)

HSP 1 Score: 946.8 bits (2446), Expect = 4.5e-272
Identity = 546/592 (92.23%), Postives = 570/592 (96.28%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDDRDSKKAKKNENDRNEKGSRKREVDEEAQAGSGGREDEELKVK 60
           MDFDEYDYLEKAVE+QDDR++KK K++E++RNEK +RKREVDEE  AGSGGREDEE+KVK
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSESERNEKSTRKREVDEE--AGSGGREDEEVKVK 60

Query: 61  RSRGEYENGKDDRDHSGRGRDRHRRDREEETDVGKERDRERNRTRERGSSEKERDRDRDR 120
           RSR E+ENGK+DRDHSGR RDRHRRDREEETD GKERD+ERNRTRERGSSEKERDRDRDR
Sbjct: 61  RSRSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERDRDRDR 120

Query: 121 EERDRERHKEKERERDKDRRDKERDRERHKEKERERDKDRREKEKEKEKEKEKERERRER 180
           EERDR+RHKEKERERDKDR+DKERDRERHKEK+RERDKDRR+KEKE+E+EKEKERERR+R
Sbjct: 121 EERDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEKEREREKEKERERRDR 180

Query: 181 ERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQM 240
           ERREREREEERSRRSRSRSVREREREVDVRE+RRMKEKKD  EPEADPERDQRTVFAYQM
Sbjct: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTAEPEADPERDQRTVFAYQM 240

Query: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300
           PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG
Sbjct: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300

Query: 301 QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360
           QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE
Sbjct: 301 QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360

Query: 361 LVQLPLDLESGHCKGFGFVQVVCSSRTCKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV 420
           LVQLPLDLESGHCKGFGFVQ        KAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV
Sbjct: 361 LVQLPLDLESGHCKGFGFVQ-FAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV 420

Query: 421 AKSNDLDDDEGGGL--ALNAHSRALLMQKLDRTGIATSIAGSLGAPVLNGSASNQRSTSL 480
           AKSNDLDDDEGGGL  ALNA SRALLMQKLDRTGIATSIAGSLGAPVLNGSA NQRSTSL
Sbjct: 421 AKSNDLDDDEGGGLVGALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSL 480

Query: 481 PLNGQAAVATAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEE 540
           PLNGQAAVA APVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEE
Sbjct: 481 PLNGQAAVA-APVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEE 540

Query: 541 CSKYGHVKHIYVDKNSAGCVYMQYDTVDAAINAQRAMHMRWFAGRQISVLFM 591
           CSKYGHVKHIYVDKNSAGCVY+QYDTV+AA+NAQRAMH+RWFAGRQISVLFM
Sbjct: 541 CSKYGHVKHIYVDKNSAGCVYLQYDTVEAAVNAQRAMHLRWFAGRQISVLFM 588

[Close]

BLAST of Sgr026390 vs. ExPASy TrEMBL
Match: A0A0A0KFB3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486730 PE=4 SV=1)

HSP 1 Score: 944.1 bits (2439), Expect = 2.9e-271
Identity = 542/590 (91.86%), Postives = 569/590 (96.44%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDDRDSKKAKKNENDRNEKGSRKREVDEEAQAGSGGREDEELKVK 60
           MDFDEYDYLEKAVE+QDDR++KK K+++++RNEK +RKREVDEE  AGSGGREDEE+KVK
Sbjct: 1   MDFDEYDYLEKAVEEQDDRETKKPKRSDSERNEKSTRKREVDEE--AGSGGREDEEVKVK 60

Query: 61  RSRGEYENGKDDRDHSGRGRDRHRRDREEETDVGKERDRERNRTRERGSSEKERDRDRDR 120
           RSR E+ENGK+DRDHSGR RDRHRRDREEETD GKERD+ERNRTRERGSSEKER+RDRDR
Sbjct: 61  RSRSEHENGKEDRDHSGRARDRHRRDREEETDGGKERDKERNRTRERGSSEKERERDRDR 120

Query: 121 EERDRERHKEKERERDKDRRDKERDRERHKEKERERDKDRREKEKEKEKEKEKERERRER 180
           EERDR+RHKEKERERDKDR+DKERDRERHKEK+RERDKDRR+KE+E+EKEKEKERERR+R
Sbjct: 121 EERDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKEKEKERERRDR 180

Query: 181 ERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQM 240
           ERREREREEERSRRSRSRSVREREREVDVRE+RRMKEKKD  EPEADPERDQRTVFAYQM
Sbjct: 181 ERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPERDQRTVFAYQM 240

Query: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300
           PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG
Sbjct: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300

Query: 301 QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360
           QPVMVKPSEAEKNLVQSNT+GASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE
Sbjct: 301 QPVMVKPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360

Query: 361 LVQLPLDLESGHCKGFGFVQVVCSSRTCKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV 420
           LVQLPLDLESGHCKGFGFVQ        KAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV
Sbjct: 361 LVQLPLDLESGHCKGFGFVQ-FAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV 420

Query: 421 AKSNDLDDDEGGGLALNAHSRALLMQKLDRTGIATSIAGSLGAPVLNGSASNQRSTSLPL 480
           AKSNDLDDDEGGGLALNA SRALLMQKLDRTGIATSIAGSLGAPVLNGSA NQRSTSLP+
Sbjct: 421 AKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPV 480

Query: 481 NGQAAVATAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS 540
           NGQAAVA APVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS
Sbjct: 481 NGQAAVA-APVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECS 540

Query: 541 KYGHVKHIYVDKNSAGCVYMQYDTVDAAINAQRAMHMRWFAGRQISVLFM 591
           KYG VKHIYVDKNSAGCVY+QYDTV+AAINAQRAMH+RWFAGRQISVLFM
Sbjct: 541 KYGRVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFM 586

[Close]

BLAST of Sgr026390 vs. ExPASy TrEMBL
Match: A0A6J1BV17 (RNA-binding protein 39 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005988 PE=4 SV=1)

HSP 1 Score: 940.3 bits (2429), Expect = 4.2e-270
Identity = 548/605 (90.58%), Postives = 567/605 (93.72%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDDRDSKKAKKNENDRNEKGSRKREVDEEAQAGSGGREDEELKVK 60
           MDFDEYDYLEKAVEDQD+RDSKKAKKNE++RNEK SRKREVDEE   GSGGREDEE+KVK
Sbjct: 1   MDFDEYDYLEKAVEDQDNRDSKKAKKNESERNEKSSRKREVDEE--DGSGGREDEEVKVK 60

Query: 61  RSRGEYENGKDDRDHSGRGRDRHRRDREEETDVGKERDRERNRTRERGSSEKERDRDRDR 120
           RSR E+ENGK+DRD SGRGRDRHRRDREEETD GK    ERNRTRERGSSEKERDRDR+R
Sbjct: 61  RSRSEHENGKEDRDQSGRGRDRHRRDREEETDAGK----ERNRTRERGSSEKERDRDRNR 120

Query: 121 EERDRERHKEKERERDKDRRDKERDRERHKEKERERDKDRR--------EKEKEKEKEKE 180
           E+RDRERHKEKERERD+DRRDK+RDRERHKEKERERDKDRR        EKEKEKEKEKE
Sbjct: 121 EDRDRERHKEKERERDRDRRDKDRDRERHKEKERERDKDRRDKERDKDKEKEKEKEKEKE 180

Query: 181 KERERRERERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQ 240
           KERERR+RERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQ
Sbjct: 181 KERERRDRERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQ 240

Query: 241 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIA 300
           RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIA
Sbjct: 241 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIA 300

Query: 301 LSGQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREI 360
           LSGQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREI
Sbjct: 301 LSGQLLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREI 360

Query: 361 FEAFGPVELVQLPLDLESGHCKGFGFVQVVCSSRTCKAAQSLNGKLEIAGRTIKVSSVTD 420
           FEAFGPVELVQLPLDLESGHCKGFGFVQ        K+AQSLNGKLE+AGRTIKVSSVTD
Sbjct: 361 FEAFGPVELVQLPLDLESGHCKGFGFVQ-FAHLEHAKSAQSLNGKLELAGRTIKVSSVTD 420

Query: 421 HIGAQESVAKSNDLDDDEGGGLALNAHSRALLMQKLDRTGIATSIAGSLGAPVLNGSASN 480
           HIGAQESVAKSNDLDDDEGGGLALNA SRALLMQKLDRTGIATSIAGSLGAPVLNGSA N
Sbjct: 421 HIGAQESVAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAPN 480

Query: 481 QRSTSLPLNGQAAVATAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIK 540
           QRS+SLPLNGQAAVA   VLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIK
Sbjct: 481 QRSSSLPLNGQAAVAAPAVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIK 540

Query: 541 EDVEEECSKYGHVKHIYVDKNSAGCVYMQYDTVDAAINAQRAMHMRWFAGRQISVLFMIA 598
           EDVEEECSKYG VKHIYVDKNSAGCVY+QYD V+AAINAQRAMH+RWFAGRQISVLFM +
Sbjct: 541 EDVEEECSKYGRVKHIYVDKNSAGCVYLQYDAVEAAINAQRAMHLRWFAGRQISVLFMQS 598

[Close]

BLAST of Sgr026390 vs. ExPASy TrEMBL
Match: A0A6J1GD19 (RNA-binding protein 39-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453086 PE=4 SV=1)

HSP 1 Score: 937.6 bits (2422), Expect = 2.7e-269
Identity = 545/594 (91.75%), Postives = 567/594 (95.45%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDDRDSKKAKKNENDRNEKGSRKREVDEEAQAGSGGREDEELKVK 60
           MDFDEYDYLEKAVEDQDD+++KKAKK+E++RNEK SRKREVDEE  AGSGGR DEELKVK
Sbjct: 1   MDFDEYDYLEKAVEDQDDKETKKAKKSESERNEKSSRKREVDEE--AGSGGRVDEELKVK 60

Query: 61  RSRGEYENGKDDRDHSGRGRDRHRRDREEETDVGKERDRERNRTRERGSSEKERDRDRDR 120
           RS+ E+ENGK+DRDHSGR RDRHRRDREEETD  KERDRERNRTR+RGSSEKERDRDRDR
Sbjct: 61  RSKSEHENGKEDRDHSGRARDRHRRDREEETDGVKERDRERNRTRDRGSSEKERDRDRDR 120

Query: 121 EERDRERH----KEKERERDKDRRDKERDRERHKEKERERDKDRREKEKEKEKEKEKERE 180
           EERDRERH    KEKERERDKDRRDKERDRERHKEK+RERDKDRR  +KE+E+EKEKERE
Sbjct: 121 EERDRERHKEKEKEKERERDKDRRDKERDRERHKEKDRERDKDRR--DKEREREKEKERE 180

Query: 181 RRERERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVF 240
           RRERE+REREREEERSRRSRSRSVRE+EREVDVRENRRMKEKKDMVEPEADPERDQRTVF
Sbjct: 181 RREREKREREREEERSRRSRSRSVREKEREVDVRENRRMKEKKDMVEPEADPERDQRTVF 240

Query: 241 AYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQ 300
           AYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQ
Sbjct: 241 AYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQ 300

Query: 301 LLLGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAF 360
           LL GQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAF
Sbjct: 301 LLFGQPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAF 360

Query: 361 GPVELVQLPLDLESGHCKGFGFVQVVCSSRTCKAAQSLNGKLEIAGRTIKVSSVTDHIGA 420
           GPVELVQLPLDLESGHCKGFGFVQ        KAAQSLNGKLEIAGRTIKVSSVTDHIGA
Sbjct: 361 GPVELVQLPLDLESGHCKGFGFVQ-FAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGA 420

Query: 421 QESVAKSNDLDDDEGGGLALNAHSRALLMQKLDRTGIATSIAGSLGAPVLNGSASNQRST 480
           QE+VAKSNDLDDDEGGGLALNA SRALLMQKLDRTGIATSIAGSLGAPVLN SA NQR+T
Sbjct: 421 QENVAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNASAPNQRAT 480

Query: 481 SLPLNGQAAVATAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVE 540
           SLPLNGQAAVA APVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFD+EIKEDVE
Sbjct: 481 SLPLNGQAAVA-APVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDLEIKEDVE 540

Query: 541 EECSKYGHVKHIYVDKNSAGCVYMQYDTVDAAINAQRAMHMRWFAGRQISVLFM 591
           EECSKYGHVKHIYVDKNSAGCVY+QYDTV+AAINAQRAMH+RWFAGRQISVLFM
Sbjct: 541 EECSKYGHVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFM 588

[Close]

BLAST of Sgr026390 vs. TAIR 10
Match: AT5G09880.1 (Splicing factor, CC1-like )

HSP 1 Score: 516.5 bits (1329), Expect = 2.9e-146
Identity = 345/591 (58.38%), Postives = 406/591 (68.70%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDDRDSKKAKKNENDRNEKGSRKREVDEEAQAGSGGREDEELKVK 60
           M+FDEY+YLEK VE +    +KK +++ N+R+E+  RKRE  E      G  E    + K
Sbjct: 1   MEFDEYEYLEKTVE-EGAGSNKKKEESGNERSERSYRKREGGERQGEEGGEEERVSSRSK 60

Query: 61  RSRGEYENGKDDRDHSGRGRDRHRRDREEETDVGKERDRERNRTRERGSSEKERDRDRDR 120
           +SRG+ E                                      E G  +++R+R+R R
Sbjct: 61  KSRGDGE--------------------------------------ENGGGKRDRERERHR 120

Query: 121 EERDRERHKEKERERDKDRRDKERDRERHKEKERERDKDRREKEKEKEKEKEKERERRER 180
             RD++R ++K RE     RDKE DRER   KER+R           +++K ++RERRER
Sbjct: 121 SSRDKDRERDKVRE---GSRDKESDRER-SSKERDR----------SDRDKPRDRERRER 180

Query: 181 ERREREREEERSRRSRSRSVREREREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQM 240
           E+    R   RSRR       E+E EV  R +RR ++KKD  EPEADPERDQRTVFAYQM
Sbjct: 181 EK----RSSSRSRR------EEKEPEVVERGSRRHRDKKD--EPEADPERDQRTVFAYQM 240

Query: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLG 300
           PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGY+EFYD MSVPMAIALSGQL LG
Sbjct: 241 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLFLG 300

Query: 301 QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE 360
           QPVMVKPSEAEKNL QSN++   G GP    DRKLYVGNLHFNM+E  LR+IFEAFGPVE
Sbjct: 301 QPVMVKPSEAEKNLAQSNSTTVGGTGP---ADRKLYVGNLHFNMSELQLRQIFEAFGPVE 360

Query: 361 LVQLPLDLESGHCKGFGFVQVVCSSRTCKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESV 420
           LVQLPLD E+G CKGFGF+Q V    +  A  +LNGKLEIAGRTIKVSSV+DHIG Q+S 
Sbjct: 361 LVQLPLDPETGQCKGFGFIQFVQLEHSKAAQIALNGKLEIAGRTIKVSSVSDHIGTQDSA 420

Query: 421 AKSNDLDDDEGGGLALNAHSRALLMQKLDRTGIATSIAGSLGAPVLNGSASNQRSTSLPL 480
            KS D DDD+GGGLALNA SRA+LMQKLDR+GIATSI GSLG P LNG+A NQ       
Sbjct: 421 PKSADFDDDDGGGLALNAQSRAMLMQKLDRSGIATSIVGSLGVPGLNGAAFNQ------- 480

Query: 481 NGQAAVATAPVLPANFTPP-VLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEEC 540
            G        VLP    P  V + VG PSECLLLKNMFDP+TET P+FD+EI++DV +EC
Sbjct: 481 PGMNPSFPTSVLPTTAIPSFVNEHVGLPSECLLLKNMFDPATETEPNFDLEIRDDVADEC 516

Query: 541 SKYGHVKHIYVDKNSAGCVYMQYDTVDAAINAQRAMHMRWFAGRQISVLFM 591
           SKYG V HIYVDKNSAG VY+++ +V+AA  AQRAMHMRWFA + IS  FM
Sbjct: 541 SKYGPVNHIYVDKNSAGFVYLRFQSVEAAAAAQRAMHMRWFAQKMISATFM 516

[Close]

BLAST of Sgr026390 vs. TAIR 10
Match: AT2G16940.1 (Splicing factor, CC1-like )

HSP 1 Score: 429.9 bits (1104), Expect = 3.6e-120
Identity = 324/620 (52.26%), Postives = 401/620 (64.68%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDDRDSKKAKKNENDRNEKGSRKREVDEEAQAGSGGREDEELKVK 60
           MDFDEY+YLEK VE            N +  NE G+              G  DE++K  
Sbjct: 1   MDFDEYEYLEKTVE------------NPHLENEVGN--------------GGGDEKVK-- 60

Query: 61  RSRGEYENGKDDRDHSGRGRDRHRRDREEETDVGKERDRERNRTRERGSSEKERDRDRDR 120
                   GK +R  S R R   +++R+E+ D G+   R R+  R R      RDR+RDR
Sbjct: 61  ------SEGK-ERSRSSRHRGDKKKERDEDED-GRRSKRSRSHHRSR-----SRDRERDR 120

Query: 121 EERDRERHKEKERERDKDRRDKERDRERHKEKERERDKDRREKEKEKEKEKEKERERRER 180
               RE H++++RE+D D+ ++       K++ER+RDKDR      K ++ EK+R RR R
Sbjct: 121 HRSSRE-HRDRDREKDVDKEER-----NGKDRERDRDKDR----DSKGRDHEKDRSRRSR 180

Query: 181 ERREREREEERSRRSRSRSVREREREVDVRENRRMKEKK-DMVEPEADPERDQRTVFAYQ 240
            R ER R +ER  +S     +ERE +   R+ RR K+KK D VEPEADPERDQRTVFAYQ
Sbjct: 181 SRSERHRSQER-EKSLEIEPKERETKDRDRDRRRHKDKKEDKVEPEADPERDQRTVFAYQ 240

Query: 241 MPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLL 300
           + L+ATERDVYEFFS+AGKVRDVR+IMDR SRRS+G+GYVEFYD MSVPMAIALSGQ LL
Sbjct: 241 IALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMAIALSGQPLL 300

Query: 301 GQPVMVKPSEAEKNLVQSNT--SGASG-AGPYGAVDRKLYVGNLHFNMTETHLREIFEAF 360
           GQPVMVKPSEAEKNLVQS T  +GA G  GPY    R+LYVGNLH NM+E  LR++FE+F
Sbjct: 301 GQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGGARRLYVGNLHINMSEDDLRKVFESF 360

Query: 361 GPVELVQLPLDLESGHCKGFGFVQVVCSSRTCKAAQSLNGKLEIAGRTIKVSSVTDHIGA 420
           G VELVQ+P D E+G CKGFGFVQ        + A +LNG+LEIAGR IKVS+VTD    
Sbjct: 361 GSVELVQVPRD-ETGLCKGFGFVQ-FARLEDARNALNLNGQLEIAGRAIKVSAVTDQTEV 420

Query: 421 QES--VAKSNDLDDDEGGGLALNAHSRALLMQKLDRTGIATSIAGSLGAPVLNGSASNQR 480
            E+     + DLDDD+GGGL+LNA SRALLMQKLDR+G A+S  G   A   NG  S   
Sbjct: 421 PEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGTASS-TGLTTAASFNGGVSTIS 480

Query: 481 STSLP---------LNGQAAVATAP-VLPANFTPPVLQSVGSPSECLLLKNMFDPSTETA 540
           S + P         + G A     P V+PA F P     +G PSECLLLKNMFDPSTET 
Sbjct: 481 SLAAPALVQGSFPAVAGLAGSGIIPGVIPAGFDP-----IGVPSECLLLKNMFDPSTETE 540

Query: 541 PDFDMEIKEDVEEECSKYGHVKHIYVDKNSAGCVYMQYDTVDAAINAQRAMHMRWFAGRQ 600
            DFD +IKEDV+EECSK+G + HI+VDKNS G VY++++   AAI AQRA+H RWFAG+ 
Sbjct: 541 DDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKM 560

Query: 601 ISVLFMIADYIQASLSHFSV 605
           I+  +M  +  +A      V
Sbjct: 601 ITATYMTTEAYEAKFPESKV 560

[Close]

BLAST of Sgr026390 vs. TAIR 10
Match: AT2G16940.2 (Splicing factor, CC1-like )

HSP 1 Score: 411.0 bits (1055), Expect = 1.7e-114
Identity = 314/653 (48.09%), Postives = 398/653 (60.95%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQ-----------DDRDSKKAKKNENDRNEKGSRKREVDEEAQAGS 60
           MDFDEY+YLEK VE+            D++   + K+       +G +K+E DE      
Sbjct: 1   MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDE------ 60

Query: 61  GGREDEELKVKRSRGEYENGKDDRDHSGRGRDRHRRDREEETDVGKERDRERNRTRERGS 120
              +++  + KRSR  + +   DR+       R  RDR+ E DV KE         ER  
Sbjct: 61  ---DEDGRRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKE---------ERNG 120

Query: 121 SEKERDRDRDREERDRERHKEKERERDKDRRDKERDRERHKEKERERDKDRREKEKEKEK 180
            ++ERDRD+DR+ + R      + E+D+ RR + R  ERH+ +ERE+  +   KE+E   
Sbjct: 121 KDRERDRDKDRDSKGR------DHEKDRSRRSRSRS-ERHRSQEREKSLEIEPKERE--- 180

Query: 181 EKEKERERRERERRERE-----------------------REEERSRRSRSRSVRERERE 240
            K+++R+RR       +                          E + R+       R+R 
Sbjct: 181 TKDRDRDRRYTSELVIDFIIYVHWYCLLYNLMGHVPFKIIIVIEGTSRASCVYAYWRKRH 240

Query: 241 VDVRENRRMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIM 300
            D        +K+D VEPEADPERDQRTVFAYQ+ L+ATERDVYEFFS+AGKVRDVR+IM
Sbjct: 241 KD--------KKEDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIM 300

Query: 301 DRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNT--SGASG 360
           DR SRRS+G+GYVEFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQS T  +GA G
Sbjct: 301 DRISRRSRGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGG 360

Query: 361 -AGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQVVC 420
             GPY    R+LYVGNLH NM+E  LR++FE+FG VELVQ+P D E+G CKGFGFVQ   
Sbjct: 361 MLGPYSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQ-FA 420

Query: 421 SSRTCKAAQSLNGKLEIAGRTIKVSSVTDHIGAQES--VAKSNDLDDDEGGGLALNAHSR 480
                + A +LNG+LEIAGR IKVS+VTD     E+     + DLDDD+GGGL+LNA SR
Sbjct: 421 RLEDARNALNLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSR 480

Query: 481 ALLMQKLDRTGIATSIAGSLGAPVLNGSASNQRSTSLP---------LNGQAAVATAP-V 540
           ALLMQKLDR+G A+S  G   A   NG  S   S + P         + G A     P V
Sbjct: 481 ALLMQKLDRSGTASS-TGLTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGV 540

Query: 541 LPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGHVKHIYVD 600
           +PA F P     +G PSECLLLKNMFDPSTET  DFD +IKEDV+EECSK+G + HI+VD
Sbjct: 541 IPAGFDP-----IGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVD 600

Query: 601 KNSAGCVYMQYDTVDAAINAQRAMHMRWFAGRQISVLFMIADYIQASLSHFSV 605
           KNS G VY++++   AAI AQRA+H RWFAG+ I+  +M  +  +A      V
Sbjct: 601 KNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKFPESKV 609

[Close]

BLAST of Sgr026390 vs. TAIR 10
Match: AT2G16940.3 (Splicing factor, CC1-like )

HSP 1 Score: 404.4 bits (1038), Expect = 1.6e-112
Identity = 319/636 (50.16%), Postives = 401/636 (63.05%), Query Frame = 0


Query: 1   MDFDEYDYLEKAVEDQDDRDSKKAKKNENDRNEKGSRKREVDEEAQAGSGGREDEELKVK 60
           MDFDEY+YLEK VE+          +NE        + +   +E    S  R D+    K
Sbjct: 1   MDFDEYEYLEKTVENPH-------LENEVGNGGGDEKVKSEGKERSRSSRHRGDK----K 60

Query: 61  RSRGEYENGKDDRDHSGRGRDRHRRDREEETDVGKERDRERNRTRERGSSEKERDRDRDR 120
           + R E E+G+     S R R  HR          + RDRER+R R   SS + RDRDR++
Sbjct: 61  KERDEDEDGR----RSKRSRSHHR---------SRSRDRERDRHR---SSREHRDRDREK 120

Query: 121 EERDRERH-KEKERERDKDRRDKERDRERHKEKERERDKDRREKEKEKEKEKEKERERRE 180
           +    ER+ K++ER+RDKDR  K RD E+ + +   R + R E+ + +E+EK  E E +E
Sbjct: 121 DVDKEERNGKDRERDRDKDRDSKGRDHEKDRSR---RSRSRSERHRSQEREKSLEIEPKE 180

Query: 181 RERREREREEERSRRSRSRSVR---EREREVDVRE----NRRMKEKKDMVEPEADPERDQ 240
           RE ++R+R+           V    + +  +  R+     R   +K+D VEPEADPERDQ
Sbjct: 181 RETKDRDRDRRFILMLLGPLVLPSVQLDGALPCRDFSCFIRHKDKKEDKVEPEADPERDQ 240

Query: 241 RTVFAYQMPLKATERDVYEFFSKAGK---------VRDVRLIMDRNSRRSKGVGYVEFYD 300
           RTVFAYQ+ L+ATERDVYEFFS+AGK         VRDVR+IMDR SRRS+G+GYVEFYD
Sbjct: 241 RTVFAYQIALRATERDVYEFFSRAGKVCPFLCRFHVRDVRIIMDRISRRSRGIGYVEFYD 300

Query: 301 AMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNT--SGASG-AGPYGAVDRKLYVGNL 360
            MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQS T  +GA G  GPY    R+LYVGNL
Sbjct: 301 TMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGGARRLYVGNL 360

Query: 361 HFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQVVCSSRTCKAAQSLNGKLEI 420
           H NM+E  LR++FE+FG VELVQ+P D E+G CKGFGFVQ        + A +LNG+LEI
Sbjct: 361 HINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQ-FARLEDARNALNLNGQLEI 420

Query: 421 AGRTIKVSSVTDHIGAQES--VAKSNDLDDDEGGGLALNAHSRALLMQKLDRTGIATSIA 480
           AGR IKVS+VTD     E+     + DLDDD+GGGL+LNA SRALLMQKLDR+G A+S  
Sbjct: 421 AGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGTASS-T 480

Query: 481 GSLGAPVLNGSASNQRSTSLP---------LNGQAAVATAP-VLPANFTPPVLQSVGSPS 540
           G   A   NG  S   S + P         + G A     P V+PA F P     +G PS
Sbjct: 481 GLTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGVIPAGFDP-----IGVPS 540

Query: 541 ECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGHVKHIYVDKNSAGCVYMQYDTVDAA 600
           ECLLLKNMFDPSTET  DFD +IKEDV+EECSK+G + HI+VDKNS G VY++++   AA
Sbjct: 541 ECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVYLRFENAQAA 598

Query: 601 INAQRAMHMRWFAGRQISVLFMIADYIQASLSHFSV 605
           I AQRA+H RWFAG+ I+  +M  +  +A      V
Sbjct: 601 IGAQRALHGRWFAGKMITATYMTTEAYEAKFPESKV 598

The following BLAST results are available for this feature:

BLAST of Sgr026390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440993.1	2.9e-273	92.54	PREDICTED: RNA-binding protein 39 isoform X4 [Cucumis melo]	[more]
XP_008440991.1	9.4e-272	92.23	PREDICTED: RNA-binding protein 39 isoform X2 [Cucumis melo]	[more]
XP_038881757.1	9.4e-272	92.54	RNA-binding protein 39 isoform X2 [Benincasa hispida]	[more]
XP_004141977.1	6.1e-271	91.86	RNA-binding protein 39 isoform X3 [Cucumis sativus] >KGN48400.1 hypothetical pro...	[more]
XP_022133416.1	8.8e-270	90.58	RNA-binding protein 39 isoform X2 [Momordica charantia]	[more]

BLAST of Sgr026390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5RC80	9.0e-60	40.32	RNA-binding protein 39 OS=Pongo abelii OX=9601 GN=RBM39 PE=2 SV=1	[more]
Q14498	1.0e-58	40.64	RNA-binding protein 39 OS=Homo sapiens OX=9606 GN=RBM39 PE=1 SV=2	[more]
Q8VH51	1.0e-58	40.64	RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2	[more]
Q86U06	7.2e-25	33.86	Probable RNA-binding protein 23 OS=Homo sapiens OX=9606 GN=RBM23 PE=1 SV=1	[more]
O13845	2.7e-24	30.03	RNA-binding protein rsd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ...	[more]

BLAST of Sgr026390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B2E3	1.4e-273	92.54	RNA-binding protein 39 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103485239 PE=4 S...	[more]
A0A1S3B1Y4	4.5e-272	92.23	RNA-binding protein 39 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485239 PE=4 S...	[more]
A0A0A0KFB3	2.9e-271	91.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486730 PE=4 SV=1	[more]
A0A6J1BV17	4.2e-270	90.58	RNA-binding protein 39 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005988...	[more]
A0A6J1GD19	2.7e-269	91.75	RNA-binding protein 39-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of Sgr026390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09880.1	2.9e-146	58.38	Splicing factor, CC1-like	[more]
AT2G16940.1	3.6e-120	52.26	Splicing factor, CC1-like	[more]
AT2G16940.2	1.7e-114	48.09	Splicing factor, CC1-like	[more]
AT2G16940.3	1.6e-112	50.16	Splicing factor, CC1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 128..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..231
None	No IPR available	PANTHER	PTHR48036	SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED	coord: 1..597
None	No IPR available	PANTHER	PTHR48036:SF5	CC1-LIKE SPLICING FACTOR	coord: 1..597
None	No IPR available	CDD	cd12285	RRM3_RBM39_like	coord: 508..590 e-value: 4.52369E-38 score: 133.824
None	No IPR available	CDD	cd12283	RRM1_RBM39_like	coord: 234..306 e-value: 2.26098E-45 score: 153.145
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 334..408 e-value: 5.6E-19 score: 79.1 coord: 510..588 e-value: 3.9E-6 score: 36.4 coord: 234..306 e-value: 2.6E-17 score: 73.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 240..302 e-value: 3.6E-11 score: 42.8 coord: 532..585 e-value: 2.6E-5 score: 23.9 coord: 335..406 e-value: 3.0E-15 score: 55.8
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 233..310 score: 15.562085
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 333..412 score: 16.380745
IPR029123	Splicing factor RBM39, linker	PFAM	PF15519	RBM39linker	coord: 426..526 e-value: 3.7E-23 score: 82.4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 311..409 e-value: 4.9E-21 score: 77.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 505..602 e-value: 2.3E-30 score: 106.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 227..310 e-value: 2.5E-21 score: 77.6
IPR006509	Splicing factor, RBM39-like	TIGRFAM	TIGR01622	TIGR01622	coord: 118..598 e-value: 6.1E-167 score: 554.5
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 173..308
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 330..411
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 506..589

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr026390.1	Sgr026390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding