Sgr026221 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr026221
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
Locationtig00153031: 2971902 .. 2972357 (-)
RNA-Seq ExpressionSgr026221
SyntenySgr026221
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAACTCTTTGCAGCGAATCTGGAACCACAGATGTGTTCTCCGGGCTACTGCGGCTCCTCTCTGCAGGTCATTCTCCACCTACTCTTTGGTTGAAGTCAAGCCCGGCGAGATCGGTATGGTCTCTGGAATTCCAGAGGAACACCTTACCAGGAGGGTATGGGCTCGGCATTCATTTCCTGTACTATTTATCAATGAGCGTCTGTTTGCTTATGTTATGCTATAATTTCAAGGGATCGGGTTAATGGATGATACTGATGATTTTTGGGGATTGGGTATTTTTCTACGCGTGTGGTTAGGTATTCTGTTTGCTTCTACCTGGGCCTTTAGAATGGTCTGCAGTGGCTAAACCCTTTAGGCGGTTTCTTTATTGCAACTTATCCAAATGTTACGAAAAGGAGACGGAAGTTTTTCCGGCTGATTTCCCACTACGACACTACTGTTATTATCAATA

mRNA sequence

ATGGCCAACTCTTTGCAGCGAATCTGGAACCACAGATGTGTTCTCCGGGCTACTGCGGCTCCTCTCTGCAGGTCATTCTCCACCTACTCTTTGGTTGAAGTCAAGCCCGGCGAGATCGGTATGGTCTCTGGAATTCCAGAGGAACACCTTACCAGGAGGGTATGGGCTCGGCATTCATTTCCTGTACTATTTATCAATGAGCGTCTGTTTGCTTATGTATTCTGTTTGCTTCTACCTGGGCCTTTAGAATGGTCTGCAGTGGCTAAACCCTTTAGGCGGTTTCTTTATTGCAACTTATCCAAATGTTACGAAAAGGAGACGGAAGTTTTTCCGGCTGATTTCCCACTACGACACTACTGTTATTATCAATA

Coding sequence (CDS)

ATGGCCAACTCTTTGCAGCGAATCTGGAACCACAGATGTGTTCTCCGGGCTACTGCGGCTCCTCTCTGCAGGTCATTCTCCACCTACTCTTTGGTTGAAGTCAAGCCCGGCGAGATCGGTATGGTCTCTGGAATTCCAGAGGAACACCTTACCAGGAGGGTATGGGCTCGGCATTCATTTCCTGTACTATTTATCAATGAGCGTCTGTTTGCTTATGTATTCTGTTTGCTTCTACCTGGGCCTTTAGAATGGTCTGCAGTGGCTAAACCCTTTAGGCGGTTTCTTTATTGCAACTTATCCAAATGTTACGAAAAGGAGACGGAAGTTTTTCCGGCTGATTTCCCACTACGACACTACTGTTATTATCAATA

Protein sequence

MANSLQRIWNHRCVLRATAAPLCRSFSTYSLVEVKPGEIGMVSGIPEEHLTRRVWARHSFPVLFINERLFAYVFCLLLPGPLEWSAVAKPFRRFLYCNLSKCYEKETEVFPADFPLRHYCYYQX
Homology
BLAST of Sgr026221 vs. NCBI nr
Match: XP_022132610.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Momordica charantia])

HSP 1 Score: 101.3 bits (251), Expect = 6.2e-18
Identity = 48/54 (88.89%), Postives = 49/54 (90.74%), Query Frame = 0

Query: 1  MANSLQRIWNHRCVLRATAAPLCRSFSTYSLVEVKPGEIGMVSGIPEEHLTRRV 55
          MANSLQRIWNHRC LR T APLCRSFS  SLV+VKPGEIGMVSGIPEEHLTRRV
Sbjct: 1  MANSLQRIWNHRCGLRGTLAPLCRSFSADSLVQVKPGEIGMVSGIPEEHLTRRV 54

BLAST of Sgr026221 vs. NCBI nr
Match: XP_038881462.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Benincasa hispida])

HSP 1 Score: 100.1 bits (248), Expect = 1.4e-17
Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = 0

Query: 1  MANSLQRIWNHRCVLRATAAPLCRSFSTYSLVEVKPGEIGMVSGIPEEHLTRRV 55
          MANSLQRIW+H C LR T APLCRSFST SLV+VKPGEIGMVSGIPEEHLTRRV
Sbjct: 1  MANSLQRIWSHGCALRGTVAPLCRSFSTDSLVQVKPGEIGMVSGIPEEHLTRRV 54

BLAST of Sgr026221 vs. NCBI nr
Match: XP_022962977.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita moschata] >XP_022962978.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita moschata] >XP_023003205.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita maxima] >XP_023517797.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6594972.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 97.8 bits (242), Expect = 6.9e-17
Identity = 47/54 (87.04%), Postives = 47/54 (87.04%), Query Frame = 0

Query: 1  MANSLQRIWNHRCVLRATAAPLCRSFSTYSLVEVKPGEIGMVSGIPEEHLTRRV 55
          MANSLQRIWN  C LR T APLCRSFS  SLVEVKPGEIGMVSGIPEEHLTRRV
Sbjct: 1  MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRV 54

BLAST of Sgr026221 vs. NCBI nr
Match: KAG7026931.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 97.8 bits (242), Expect = 6.9e-17
Identity = 47/54 (87.04%), Postives = 47/54 (87.04%), Query Frame = 0

Query: 1  MANSLQRIWNHRCVLRATAAPLCRSFSTYSLVEVKPGEIGMVSGIPEEHLTRRV 55
          MANSLQRIWN  C LR T APLCRSFS  SLVEVKPGEIGMVSGIPEEHLTRRV
Sbjct: 1  MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRV 54

BLAST of Sgr026221 vs. NCBI nr
Match: XP_008440406.1 (PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Cucumis melo] >KAA0036408.1 NADH dehydrogenase (ubiquinone) iron-sulfur protein 4 [Cucumis melo var. makuwa] >TYK12804.1 NADH dehydrogenase (ubiquinone) iron-sulfur protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 92.0 bits (227), Expect = 3.8e-15
Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 0

Query: 1  MANSLQRIWNHRCVLRATAAPLCRSFSTYSLVEVKPGEIGMVSGIPEEHLTRRV 55
          MANSLQRIW+H   LR+T APL RSFST SLV+VKPGEIGMVSGIPEEHLTRRV
Sbjct: 1  MANSLQRIWSHGRALRSTVAPLSRSFSTDSLVQVKPGEIGMVSGIPEEHLTRRV 54

BLAST of Sgr026221 vs. ExPASy Swiss-Prot
Match: P80268 (NADH-ubiquinone oxidoreductase 18 kDa subunit (Fragment) OS=Solanum tuberosum OX=4113 PE=1 SV=2)

HSP 1 Score: 45.4 bits (106), Expect = 5.3e-04
Identity = 20/25 (80.00%), Postives = 23/25 (92.00%), Query Frame = 0

Query: 30 SLVEVKPGEIGMVSGIPEEHLTRRV 55
          +LVE+KPGEIGMVSGIP+EHL R V
Sbjct: 4  ALVEIKPGEIGMVSGIPDEHLRRFV 28

BLAST of Sgr026221 vs. ExPASy TrEMBL
Match: A0A6J1BSY3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111005430 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 3.0e-18
Identity = 48/54 (88.89%), Postives = 49/54 (90.74%), Query Frame = 0

Query: 1  MANSLQRIWNHRCVLRATAAPLCRSFSTYSLVEVKPGEIGMVSGIPEEHLTRRV 55
          MANSLQRIWNHRC LR T APLCRSFS  SLV+VKPGEIGMVSGIPEEHLTRRV
Sbjct: 1  MANSLQRIWNHRCGLRGTLAPLCRSFSADSLVQVKPGEIGMVSGIPEEHLTRRV 54

BLAST of Sgr026221 vs. ExPASy TrEMBL
Match: A0A6J1HE01 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111463327 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 3.3e-17
Identity = 47/54 (87.04%), Postives = 47/54 (87.04%), Query Frame = 0

Query: 1  MANSLQRIWNHRCVLRATAAPLCRSFSTYSLVEVKPGEIGMVSGIPEEHLTRRV 55
          MANSLQRIWN  C LR T APLCRSFS  SLVEVKPGEIGMVSGIPEEHLTRRV
Sbjct: 1  MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRV 54

BLAST of Sgr026221 vs. ExPASy TrEMBL
Match: A0A6J1KR46 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111496890 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 3.3e-17
Identity = 47/54 (87.04%), Postives = 47/54 (87.04%), Query Frame = 0

Query: 1  MANSLQRIWNHRCVLRATAAPLCRSFSTYSLVEVKPGEIGMVSGIPEEHLTRRV 55
          MANSLQRIWN  C LR T APLCRSFS  SLVEVKPGEIGMVSGIPEEHLTRRV
Sbjct: 1  MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRV 54

BLAST of Sgr026221 vs. ExPASy TrEMBL
Match: A0A5D3CP24 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003960 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.8e-15
Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 0

Query: 1  MANSLQRIWNHRCVLRATAAPLCRSFSTYSLVEVKPGEIGMVSGIPEEHLTRRV 55
          MANSLQRIW+H   LR+T APL RSFST SLV+VKPGEIGMVSGIPEEHLTRRV
Sbjct: 1  MANSLQRIWSHGRALRSTVAPLSRSFSTDSLVQVKPGEIGMVSGIPEEHLTRRV 54

BLAST of Sgr026221 vs. ExPASy TrEMBL
Match: A0A1S3B1N9 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103484861 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.8e-15
Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 0

Query: 1  MANSLQRIWNHRCVLRATAAPLCRSFSTYSLVEVKPGEIGMVSGIPEEHLTRRV 55
          MANSLQRIW+H   LR+T APL RSFST SLV+VKPGEIGMVSGIPEEHLTRRV
Sbjct: 1  MANSLQRIWSHGRALRSTVAPLSRSFSTDSLVQVKPGEIGMVSGIPEEHLTRRV 54

BLAST of Sgr026221 vs. TAIR 10
Match: AT5G67590.1 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 0

Query: 15 LRATAAPLCRSFSTYSLVE--VKPGEIGMVSGIPEEHLTRRV 55
          + AT   + R F+T ++VE   K GEIG VSGIPEEHL+R+V
Sbjct: 13 IAATLRRVARPFATDAVVESDYKRGEIGKVSGIPEEHLSRKV 54

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022132610.16.2e-1888.89NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Momordica ... [more]
XP_038881462.11.4e-1787.04NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Benincasa ... [more]
XP_022962977.16.9e-1787.04NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucur... [more]
KAG7026931.16.9e-1787.04NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Cucurbita ... [more]
XP_008440406.13.8e-1583.33PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial ... [more]
Match NameE-valueIdentityDescription
P802685.3e-0480.00NADH-ubiquinone oxidoreductase 18 kDa subunit (Fragment) OS=Solanum tuberosum OX... [more]
Match NameE-valueIdentityDescription
A0A6J1BSY33.0e-1888.89NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Momordic... [more]
A0A6J1HE013.3e-1787.04NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbit... [more]
A0A6J1KR463.3e-1787.04NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbit... [more]
A0A5D3CP241.8e-1583.33NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis ... [more]
A0A1S3B1N91.8e-1583.33NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis ... [more]
Match NameE-valueIdentityDescription
AT5G67590.11.1e-0454.76NADH-ubiquinone oxidoreductase-related [more]
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12219:SF24SUBFAMILY NOT NAMEDcoord: 1..54
IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrialPANTHERPTHR12219NADH-UBIQUINONE OXIDOREDUCTASEcoord: 1..54

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr026221.1Sgr026221.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0070469 respirasome
molecular_function GO:0016651 oxidoreductase activity, acting on NAD(P)H