Sgr026076 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr026076
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionDNA-3-methyladenine glycosylase 1-like
Locationtig00153031: 1512080 .. 1513049 (-)
RNA-Seq ExpressionSgr026076
SyntenySgr026076
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAACGCGACATCTGTACTTCAACTCCTCCTTAATTATGATTCAAAACCTTGCTTTTGCTTACAGCAAATCGTTCACCGCCGCCGTGGCCTCTTATTCAACTCGATCGCCTCCGATGGCCAAAAGAACCCGCCTGAAGTCGCTGTTACAGTCCGAGTCTCAGATCCATGCCGGCCCTCTCTGTGCATCGTCTTCCTCCAAGATTCCGTTCCGATCCACAAAATTACGGAAGATTTCCTCCAATGAACAGCCGGCCAAACCACAAATCTCAGGCCCCGACGACGACGACCCGACCCGGCATTTTCGAGCCCGGTCAAATCGTTATCGTCTTCGGATGAAATATGTATAGCTATCGACCATTTACGCCGTTCCGACCCTGTCCTGATAAGTCTATTAGATTCATGTGAATCCCCCAAATTAAAATCCAATCCACCATTCCTAGCCCTAACGAAGAGCATTCTATACCAGCAGCTCGCTACGAAGGCCGCCGAATCAATCTACAATCGCTTCGCTTCGCTTTGCGGCGGCGAGGCGACGGTGCTCCCGGACGCCGTGCTCGCACTCTCGCCGCAACAGCTGCGGATAATAGGAGTTTCGGGGAGGAAAGCAAGCTACCTCCACGACCTCGCGACCAAGTACGTAGAGGGGTTTTTGTCGGATTCCTCAATTCTGGAGATGGACGACGAGAGTCTGCTGAGGACGCTGACGGCGGTGAAAGGGATCGGCGTTTGGTCGGTCCACATGTTCATGATTTTTACTCTGCACCGGCCGGACGTGCTACCGGTGGGCGATCTAGGCGTCAGAAAAGGCGTGCAGCGGTTGTACGGGCTGAAAGAGTTGCCGAAGCCGATAGAGATGGAGAAACTGTGCGAGAAATGGAAGCCTTACAGATCGATGGGGTCTTGGTACATGTGGAGGTTAATGGAAGTGAAGGGGAACATGAAGAAGGATCCCAATTCATCAGATAA

mRNA sequence

ATGAAAACGCGACATCTGTACTTCAACTCCTCCTTAATTATGATTCAAAACCTTGCTTTTGCTTACAGCAAATCGTTCACCGCCGCCGTGGCCTCTTATTCAACTCGATCGCCTCCGATGGCCAAAAGAACCCGCCTGAAGTCGCTGTTACAGTCCGAGTCTCAGATCCATGCCGGCCCTCTCTGTGCATCGTCTTCCTCCAAGATTCCGTTCCGATCCACAAAATTACGGAAGATTTCCTCCAATGAACAGCCGGCCAAACCACAAATCTCAGGCCCCGACGACGACGACCCGACCCGGCATTTTCGAGCCCGGTCAAATCGTTATCCAGCTCGCTACGAAGGCCGCCGAATCAATCTACAATCGCTTCGCTTCGCTTTGCGGCGGCGAGGCGACGGTGCTCCCGGACGCCGTGCTCGCACTCTCGCCGCAACAGCTGCGGATAATAGGAGTTTCGGGGAGGAAAGCAAGCTACCTCCACGACCTCGCGACCAAGTACGTAGAGGGGTTTTTGTCGGATTCCTCAATTCTGGAGATGGACGACGAGAGTCTGCTGAGGACGCTGACGGCGGTGAAAGGGATCGGCGTTTGGTCGGTCCACATGTTCATGATTTTTACTCTGCACCGGCCGGACGTGCTACCGGTGGGCGATCTAGGCGTCAGAAAAGGCGTGCAGCGGTTGTACGGGCTGAAAGAGTTGCCGAAGCCGATAGAGATGGAGAAACTGTGCGAGAAATGGAAGCCTTACAGATCGATGGGGTCTTGGTACATGTGGAGGTTAATGGAAGTGAAGGGGAACATGAAGAAGGATCCCAATTCATCAGATAA

Coding sequence (CDS)

ATGAAAACGCGACATCTGTACTTCAACTCCTCCTTAATTATGATTCAAAACCTTGCTTTTGCTTACAGCAAATCGTTCACCGCCGCCGTGGCCTCTTATTCAACTCGATCGCCTCCGATGGCCAAAAGAACCCGCCTGAAGTCGCTGTTACAGTCCGAGTCTCAGATCCATGCCGGCCCTCTCTGTGCATCGTCTTCCTCCAAGATTCCGTTCCGATCCACAAAATTACGGAAGATTTCCTCCAATGAACAGCCGGCCAAACCACAAATCTCAGGCCCCGACGACGACGACCCGACCCGGCATTTTCGAGCCCGGTCAAATCGTTATCCAGCTCGCTACGAAGGCCGCCGAATCAATCTACAATCGCTTCGCTTCGCTTTGCGGCGGCGAGGCGACGGTGCTCCCGGACGCCGTGCTCGCACTCTCGCCGCAACAGCTGCGGATAATAGGAGTTTCGGGGAGGAAAGCAAGCTACCTCCACGACCTCGCGACCAAGTACGTAGAGGGGTTTTTGTCGGATTCCTCAATTCTGGAGATGGACGACGAGAGTCTGCTGAGGACGCTGACGGCGGTGAAAGGGATCGGCGTTTGGTCGGTCCACATGTTCATGATTTTTACTCTGCACCGGCCGGACGTGCTACCGGTGGGCGATCTAGGCGTCAGAAAAGGCGTGCAGCGGTTGTACGGGCTGAAAGAGTTGCCGAAGCCGATAGAGATGGAGAAACTGTGCGAGAAATGGAAGCCTTACAGATCGATGGGGTCTTGGTACATGTGGAGGTTAATGGAAGTGAAGGGGAACATGAAGAAGGATCCCAATTCATCAGATAA

Protein sequence

MKTRHLYFNSSLIMIQNLAFAYSKSFTAAVASYSTRSPPMAKRTRLKSLLQSESQIHAGPLCASSSSKIPFRSTKLRKISSNEQPAKPQISGPDDDDPTRHFRARSNRYPARYEGRRINLQSLRFALRRRGDGAPGRRARTLAATAADNRSFGEESKLPPRPRDQVRRGVFVGFLNSGDGRRESAEDADGGERDRRLVGPHVHDFYSAPAGRATGGRSRRQKRRAAVVRAERVAEADRDGETVREMEALQIDGVLVHVEVNGSEGEHEEGSQFIR
Homology
[Close]
BLAST of Sgr026076 vs. NCBI nr
Match: XP_008440714.1 (PREDICTED: probable DNA-3-methyladenine glycosylase 2 [Cucumis melo] >KAA0036227.1 putative DNA-3-methyladenine glycosylase 2 [Cucumis melo var. makuwa] >TYK12621.1 putative DNA-3-methyladenine glycosylase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 79.3 bits (194), Expect = 5.6e-11
Identity = 44/63 (69.84%), Postives = 48/63 (76.19%), Query Frame = 0 

Query: 40  MAKRTRLKSLLQSESQIHAGPLCASSSSKIPFRSTKLRKISSNEQPAKPQISGPDDDDPT 99
           MAKR R K L QSES   A PL  SSSSKIPFRSTK+RKISSN++PAKPQ S PD  +PT
Sbjct: 1   MAKRIRRKFLFQSESPTGAVPLSPSSSSKIPFRSTKVRKISSNQEPAKPQFSAPDGYNPT 60

Query: 100 RHF 103
           R F
Sbjct: 61  RTF 63

[Close]
BLAST of Sgr026076 vs. NCBI nr
Match: XP_038881017.1 (DNA-3-methyladenine glycosylase 1-like [Benincasa hispida])

HSP 1 Score: 75.5 bits (184), Expect = 8.1e-10
Identity = 42/64 (65.62%), Postives = 50/64 (78.12%), Query Frame = 0 

Query: 40  MAKRTRLKSLLQSESQIHAGPLCASSSSKIPFRSTKLRKISSNEQPAKPQISGPDDDDPT 99
           MAKR R K L+QS+S+I A PL  SSSSKIPF STK+RKISS ++PAKPQIS    +DPT
Sbjct: 1   MAKRIRRKFLVQSDSRIDADPLPPSSSSKIPFPSTKVRKISSKQEPAKPQISTSGGNDPT 60

Query: 100 RHFR 104
           R F+
Sbjct: 61  RAFQ 64

[Close]
BLAST of Sgr026076 vs. NCBI nr
Match: XP_004143510.1 (DNA-3-methyladenine glycosylase 1 [Cucumis sativus] >KGN48831.1 hypothetical protein Csa_003752 [Cucumis sativus])

HSP 1 Score: 70.5 bits (171), Expect = 2.6e-08
Identity = 40/63 (63.49%), Postives = 45/63 (71.43%), Query Frame = 0 

Query: 40  MAKRTRLKSLLQSESQIHAGPLCASSSSKIPFRSTKLRKISSNEQPAKPQISGPDDDDPT 99
           MAKR R K L Q ES   A PL  S+SSKIPF STK+RKISSN++P KPQIS P   +PT
Sbjct: 1   MAKRIRRKCLFQLESPSDAVPLSPSASSKIPFPSTKVRKISSNQEPTKPQISAPGGYNPT 60

Query: 100 RHF 103
           R F
Sbjct: 61  RIF 63

[Close]
BLAST of Sgr026076 vs. NCBI nr
Match: XP_023543059.1 (DNA-3-methyladenine glycosylase 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 68.6 bits (166), Expect = 9.9e-08
Identity = 40/65 (61.54%), Postives = 45/65 (69.23%), Query Frame = 0 

Query: 38  PPMAKRTRLKSLLQSESQIHAGPLCASSSSKIPFRSTKLRKISSNEQPAKPQISGPDDDD 97
           PPMA+RTR K LLQSESQ  A P      SKI FR+TK+RKISS ++P KPQIS P   D
Sbjct: 33  PPMARRTRRKLLLQSESQTEADP-----PSKISFRTTKIRKISSTQKPDKPQISTPGGGD 92

Query: 98  PTRHF 103
            TR F
Sbjct: 93  RTRAF 92

[Close]
BLAST of Sgr026076 vs. NCBI nr
Match: XP_022132520.1 (DNA-3-methyladenine glycosylase 1-like [Momordica charantia])

HSP 1 Score: 67.4 bits (163), Expect = 2.2e-07
Identity = 49/87 (56.32%), Postives = 59/87 (67.82%), Query Frame = 0 

Query: 14  MIQNLAFAYSKSFTAAVASYSTRSPPMAKRTRLKSLLQSESQIHAGPLCASSSSKIPFRS 73
           MIQNLAFA  KSFTAA+AS S  SPPM+KRTRLKS  QS  Q        S + +IPFRS
Sbjct: 1   MIQNLAFAL-KSFTAAMASASNLSPPMSKRTRLKSKSQSLLQ------SQSETLEIPFRS 60

Query: 74  TKLRKISSNEQPAKPQISGPDDDDPTR 101
           TK+RK++      KP I+G  ++DPTR
Sbjct: 61  TKIRKMT-----VKPPIAG--ENDPTR 73

[Close]
BLAST of Sgr026076 vs. ExPASy TrEMBL
Match: A0A5A7T3R0 (Putative DNA-3-methyladenine glycosylase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002080 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.7e-11
Identity = 44/63 (69.84%), Postives = 48/63 (76.19%), Query Frame = 0 

Query: 40  MAKRTRLKSLLQSESQIHAGPLCASSSSKIPFRSTKLRKISSNEQPAKPQISGPDDDDPT 99
           MAKR R K L QSES   A PL  SSSSKIPFRSTK+RKISSN++PAKPQ S PD  +PT
Sbjct: 1   MAKRIRRKFLFQSESPTGAVPLSPSSSSKIPFRSTKVRKISSNQEPAKPQFSAPDGYNPT 60

Query: 100 RHF 103
           R F
Sbjct: 61  RTF 63

[Close]
BLAST of Sgr026076 vs. ExPASy TrEMBL
Match: A0A1S3B2D5 (probable DNA-3-methyladenine glycosylase 2 OS=Cucumis melo OX=3656 GN=LOC103485049 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.7e-11
Identity = 44/63 (69.84%), Postives = 48/63 (76.19%), Query Frame = 0 

Query: 40  MAKRTRLKSLLQSESQIHAGPLCASSSSKIPFRSTKLRKISSNEQPAKPQISGPDDDDPT 99
           MAKR R K L QSES   A PL  SSSSKIPFRSTK+RKISSN++PAKPQ S PD  +PT
Sbjct: 1   MAKRIRRKFLFQSESPTGAVPLSPSSSSKIPFRSTKVRKISSNQEPAKPQFSAPDGYNPT 60

Query: 100 RHF 103
           R F
Sbjct: 61  RTF 63

[Close]
BLAST of Sgr026076 vs. ExPASy TrEMBL
Match: A0A0A0KM62 (ENDO3c domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G502690 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-08
Identity = 40/63 (63.49%), Postives = 45/63 (71.43%), Query Frame = 0 

Query: 40  MAKRTRLKSLLQSESQIHAGPLCASSSSKIPFRSTKLRKISSNEQPAKPQISGPDDDDPT 99
           MAKR R K L Q ES   A PL  S+SSKIPF STK+RKISSN++P KPQIS P   +PT
Sbjct: 1   MAKRIRRKCLFQLESPSDAVPLSPSASSKIPFPSTKVRKISSNQEPTKPQISAPGGYNPT 60

Query: 100 RHF 103
           R F
Sbjct: 61  RIF 63

[Close]
BLAST of Sgr026076 vs. ExPASy TrEMBL
Match: A0A6J1BSP4 (DNA-3-methyladenine glycosylase 1-like OS=Momordica charantia OX=3673 GN=LOC111005358 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-07
Identity = 49/87 (56.32%), Postives = 59/87 (67.82%), Query Frame = 0 

Query: 14  MIQNLAFAYSKSFTAAVASYSTRSPPMAKRTRLKSLLQSESQIHAGPLCASSSSKIPFRS 73
           MIQNLAFA  KSFTAA+AS S  SPPM+KRTRLKS  QS  Q        S + +IPFRS
Sbjct: 1   MIQNLAFAL-KSFTAAMASASNLSPPMSKRTRLKSKSQSLLQ------SQSETLEIPFRS 60

Query: 74  TKLRKISSNEQPAKPQISGPDDDDPTR 101
           TK+RK++      KP I+G  ++DPTR
Sbjct: 61  TKIRKMT-----VKPPIAG--ENDPTR 73

[Close]
BLAST of Sgr026076 vs. ExPASy TrEMBL
Match: A0A6J1IQD1 (DNA-3-methyladenine glycosylase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478481 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.0e-06
Identity = 38/65 (58.46%), Postives = 43/65 (66.15%), Query Frame = 0 

Query: 38  PPMAKRTRLKSLLQSESQIHAGPLCASSSSKIPFRSTKLRKISSNEQPAKPQISGPDDDD 97
           PPMA+RTR K LLQSESQ  A P      SKI FR+T++RKISS  +P KPQIS     D
Sbjct: 33  PPMARRTRRKLLLQSESQTEADP-----PSKISFRTTEIRKISSTRKPDKPQISTDGGGD 92

Query: 98  PTRHF 103
            TR F
Sbjct: 93  RTRAF 92

The following BLAST results are available for this feature:
BLAST of Sgr026076 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008440714.15.6e-1169.84PREDICTED: probable DNA-3-methyladenine glycosylase 2 [Cucumis melo] >KAA0036227... [more]
XP_038881017.18.1e-1065.63DNA-3-methyladenine glycosylase 1-like [Benincasa hispida][more]
XP_004143510.12.6e-0863.49DNA-3-methyladenine glycosylase 1 [Cucumis sativus] >KGN48831.1 hypothetical pro... [more]
XP_023543059.19.9e-0861.54DNA-3-methyladenine glycosylase 1 [Cucurbita pepo subsp. pepo][more]
XP_022132520.12.2e-0756.32DNA-3-methyladenine glycosylase 1-like [Momordica charantia][more]
BLAST of Sgr026076 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr026076 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T3R02.7e-1169.84Putative DNA-3-methyladenine glycosylase 2 OS=Cucumis melo var. makuwa OX=119469... [more]
A0A1S3B2D52.7e-1169.84probable DNA-3-methyladenine glycosylase 2 OS=Cucumis melo OX=3656 GN=LOC1034850... [more]
A0A0A0KM621.3e-0863.49ENDO3c domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G502690 PE=4... [more]
A0A6J1BSP41.1e-0756.32DNA-3-methyladenine glycosylase 1-like OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1IQD12.0e-0658.46DNA-3-methyladenine glycosylase 1-like OS=Cucurbita maxima OX=3661 GN=LOC1114784... [more]
BLAST of Sgr026076 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..196

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr026076.1Sgr026076.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006285 base-excision repair, AP site formation
biological_process GO:0006307 DNA dealkylation involved in DNA repair
cellular_component GO:0005634 nucleus
cellular_component GO:0032993 protein-DNA complex
molecular_function GO:0032131 alkylated DNA binding
molecular_function GO:0008725 DNA-3-methyladenine glycosylase activity
molecular_function GO:0043916 DNA-7-methylguanine glycosylase activity