Sgr025886 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr025886
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	high mobility group B protein 7
Location	tig00153016: 1336207 .. 1342180 (+)
RNA-Seq Expression	Sgr025886
Synteny	Sgr025886

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGCGGAGGATCGTCGAAGTCGAGGAAGAGAGTGGAGGCCACTCCGGCGGATGCCGCCGCCGCCACTGGCCCCTCCCTCGTTCGAGCCAAAGACGGCAGTGCTTTCGCTCGATGGTGCGTCTTTTTTTTCCCATTTCTTATGACTTACTGATTTGATTTCTGTCTTCGTTTCACTGGCGCGCTAACACTTTGTTTCTTCGATTCTTTCCCGAACAAATAGTGGTTTCTGGAGTCTTTTTGGATTGATTGTATCTGGTTTTCAGTCTGCCTTTTAGTCCGATTTTTCTGTAGAGTTAGAATGGAGTATTCGCATTCCTGTAATCAGAGGAATCGCAGTAGCGAGAATCTTGAAAATATTTGGTTACTCTTACTAAATATTGGCTGATTTTTGGCTGTTACAGTGATGAGTGCGGCAAGAGTGTTCCGGTAGCCCTTATCAGCATGCACAGTTGTAGCCTTGACGCCAAAATAAGAATGAATTTGGGTATGTTATCTGTGGGGATTCGTGAATACTTTCTTCGTGGCGATAATTTCTGGATTTGGAACTCTTACCTTTCTGTTTTTTTCTACAGAGGCTCAGACTGTTGAGAAGCAAACTCAAGCTAAAAAGCCAGCCGAAAGGTATCTTACTCGTCGCTATGCATCATTCGCCGCACATTTTTTCGTTATTTTTTTCTGGTAGAGGTGATGCTTTGATTGTATTAACTTGCTCGTTTCTTTGTACAGGAAAAGATCAGCATCATCTGAGCCTAAGGCTAAAAAATCCAAAACAGAAAAGAGGGGGAAGAAAGACAAAGATCCAAATGCCCCCAAACGCCCTCCCACGGCCTTCTTTATCTTCATGTATGTAAATTCCTCGCGTACCTTCTGCTCCTTAAGTGTCAGATTGGTCAGATTTTTACAATGTTTATGTTCTGTTTACTCGGGTCTTAACTGAATTTGCTTATTGTAATACTTCAGGGACGACTTCAGAAAATCCTATAAAGAAGCAAATCCCGATTCTAAAGGCGTTAAGGAGGTTGGCACACATCCATACGTACTTTCTGAGTTTCCAGTGAAAAATTGTAATGATAGCTCAAATTATTTTATGCTGTCTTTAATAATTGAATACTTCCATCAATTTTAGGTTGCAAAGGAGGGTGGTGAGAAATGGAAGTCAATGACTGATGAAGTGAGTTAGATTACCTGCCATTTGATAAGATGCTTCTGTTTGGTCAATTATGATATCTAAACCTGAAAATGATTAACAGGAGAAGAAGCCTTACCAAGATAAAGCCGCTGAGCTGAAAGCAGAATACGAAAAAGCCTTGGAAAATCGCAATGCTGAAAATGAAGATGTAAGATTTGGGCTCTGAAACTGTTCAAACTTTTTGTTTAATTGTTCAAATGTTGATGTGGGATCTTTGTTCAGGATGAAAAAGAGGCAGAAGAGGCCGTAGAGAAGGAGGTAGAAGAAATATCAGATGAAGAGTAGGACATTGCATGTAAGGCTTTTGTAGTAGCAAATAGCTAGAAACAGCTTCTCCACTGCCTGGTTTCTGTTGTAAATTCAGAGTCTAATTTAGTCAAACTGCTGTTGGATTCTATGGTTGTGTTTGATGCAATATAATACCAATGCTTTCAAGCATGATTTTTTGTTTATGCTGTTTGATCTTTATATCTTCTACTTCATAAATGTTTTAACAAGACTCATTGTAAATTAAAACCCATTTAACAAACCCAGTGATGTAGTTGGTTCTTCAATTTCATAATTTTCTGAGGGATTTGGGAATGGAGAGATTAAACATTGGAAGAAGTGAGAACTACAGTGATTAAATGGGGGCTTTTGTTAAACTTATTGCATTTTTCTGTCAGTTTTATTAAGACCATATGCCGTGACATTTGTTTGAATAATAATCATATTTTGGTGCATGTTCTTGGAAAATGCCCCTGTATTTTGTGCTACTTGTCCTGACCTCTCTTTCTATTATTTGACGTGTAGCTTACATACACTTCTGCTAGGCATCACAATCAATTGCATTTATATATATACAAAAACATTTTTAACTTAAATTATTTAGGATTAGTTGTTATTCTTATTATTGTTAAATATATTATTGAGGATTTCAAAGATGCTTTTTTACCATTTACCTATTAGCAAAAATTACATTCATTTTTTTTATAACCATGTGTTTTTTTGAAACACTAAGAGAAAGTTAAAACGTATTCTTAATTGGCTAAAAGTATATATATATATATATATATATATATATATATATATATATATATATTTATTTATTTATTTATTTATTTATTTATCTTTTTAAAAGTCATTCTAAACTTATTTTTAATTTGTGTATTTTTAGAAAGTGCTTATATAAAAATGTTTTACAAATATTTTTTCTCAAATGGAAAATATTGAAAATAACTTAATGGTAGAAATTATAGAGAGGAAAGAATATTATACAATACAACATAATATAGGAGTATTTGGAGAAATCCAGAAAAGCAATAGAAAAACGGTGTGTTTTATTTTGTAGTTTTAATAAGAAAGATTTGGGGCTTACAAGAAGACATTTTTTGTTTGTTTAATTAAATATAATATAGGGAGTTTTTGTTTGTTTAATTAAATAGTTTGGGTTTTTGGTGTTTAATTTTGTATTGGATTGTTTATTATGTGTTTGTTTTAATTACTTTTAAAAACAAAGAAAAAAATTAATTATTGCTATATATATATATATTTGTTTGAGTTCAACAAATGTAGATGAATGAATTTCAATATTATGTTTATTTATTAGTTATGATAATTGCAATTACATAAAATATTATATAATTGACATAATGAAAAATTAATTGCAATGACTATTTAGGGAGCAAAGTAAAAAATATTGATTTACATAAAATACAATCAATTTCACAATATATAATCAAAAAGAGAATTTTAGTATTTCATTTATTTAATCAAACAAATTATAAATTTTTAGGTAATAAAAACAAATGGTTATTAGCTAAATTTGAAAAATGGTAAATTAAGCAACTAAATTTGAAAAATGGTAAATTAAGCAATTGGATAAAATAAGGGTTCTATGGGCCAAAAATAATTTGATAGGAGTAGAATACATTAATTTTTTTTTTCTACCGCTCTTATTTTAGTTACTAACCTACTCTTTTGTACCACTTAGCATCAATTTAACATTTATTAGTTCAATCAATTATCAATGTGTCAATTCAATATTAAAGTAATAATTTCAATAGAAAGTTAATTTTTTTTTTAAAAAATTAGAGATTGAATAGGAATTGCCATTAAAGTTTAGAAATTAAATTTGTAATTTAAATTTTATTTAATCTTTTTTCATTTATGGTTTAGACAATTCTCCCACTCCTGCTTTGTATGCTTGTCGAGAAAATATACACAATCAAATTTAGATTTTTAATTTATTGGATAAAAAGTAGTGACAAAGTTGGATTCTACAATTCCATGGTAACATCTTTGATTTTTATTTCTAATATTTTTGTTCCTTTTTTTTTTTTTTGGGAAAAAAAGGTATGTTAGGAACACAGGATTTCTCCATATAGCCAATCAAATTTTAAATTGATCTATTACGTCATCTAAAACTATCATATTTTAAAATTGTTGACATTTACTTAAATTCATTGTACTTCTATTTTTACTATTTAGTAAAATAAAAATAAAATAGTCCTAAATCGATGTTGATTAGAATTATTTCAATGGTATTTCTTTTTACTTTTGAGCCTTTAATTTTGAATGGATAGTCATTCTCCTTCATGATAATTATATCAATTTAAAATTTATAACGTGGATTTAACTTTCTAGCCATCTAAATTCTATTGACTAATCATTTCTTTTTTGCACATATCACTTTTATTTTTATACAGGTTAGATTTAGGATTTAGGTGGCTAACACGTCAAACTTTTGTCGTGTCTTAATAAAAATTTTCATAATAGAGATTAAATTGTTTTAAATTTTAAATTATAAAGACAATTTTCACCAAACATAGTAGGTAGTAGATCGGCAATCACTTCACCAAACATAATGAAAAACGTACCATAGTCGTGAAGGCAGTGGCAACTCTGCCCCTCCACTCCACTCTTTTCCATCGCTGCCAAAATATTTTGAATAATATCCCATTCTCCCAACTACTCCACTATTCTCTATCATGCCGATCACAAAAAATATTATAATTTTTTCAGTGATATTTCTTTTTGCTTTTGAAGCTTTAATTTTGAATGGAGAGTCATTTTCAACGTGTTTTTAAGTTACGATACAGTCTCTCAACTTTAAAGAATTTTAATTAATCTCTAGCTTTTGATGTTGATTTTAACAAGTTTCTGTACCATTTCCTTAAATGTTGACTAAGTATGTTGATTGAATTAATGAAGTGATAATTTATAATTTGGCACAATATAGTAATGAGTGGCACAAAGAAAGATAGAAGTGGAGATTTTCAAACTGGGTAAGAGATAGTGGCTATCCACCAAATTAGAGTAACAAGAGATATACAATGGAACTCCATTTATGATAGAGCGTTGTCTAACAGAAACAAGAAATATGGCTAATGGACTTCATTTATGACCCATCAACACCTAAGTTTTATTTATAACCACATGAAATGCAAGAACAATAACAGAAGGTTAAAAAAAACCCCATTTATGAACAGTTCATATGTTTAAAGAGAGATAAAAAGAAGTGAAAATTCATTTACTTTATTTACCTGACAAGGCCCAAGTTGAGGATTCCCCATGAGGTATTGACCCAAGACTTCTCCTTAGCTTTCATCAGCAGCACTCTCCCCCAAGCAATCCAGTCGTCCCATGGCATCCTCTTGTCCCAAGCGCTGCCCCATTCCAGCATCAGCCTCACCCCTTCCTCAGCCTCCCTCTCCGCCTCCTCAAACCGCCCCTTCCCCAAATACAGCTGCCCCAACGCCACATGCGGCTCCCCCACGAACGGATTCTTCTCCACGCATCTCACCAGCAACTCCTCACTTCTCTCGGACATTTCACAAACACCTTCCCAGTACAATTCTCTTGCGGCTATTTGGTCCTTTGCGTCAAGAATTTTCGTGCAGTTCTCGAAAATTGGTGGAATTACCAGCTCTAAATCCTCGTCTCTCTCTGTTTTGAGCCCCAAATCGCCGGTTTTCTTCCTCTGTGCGATTAAAATGGCTTCCTCTCTCGCTATTAGGGAGTATATGGCTCCCATTCTTGATACGGAGTTCATCCACAGCCCAGGCTTGCCATTTCCAGGCCAGAGAGATTTGTAGTTGTTACCTGTGAACTCGAGACGCCCGTCGGAGTTTTCGAACAGTGAATCCTGGAAGCCGAAGAGTTGATCGCTGAAATCGGCCATTGTCATCATGAGGAAAATCGCAACCACTCTCCTCGAAACCACCACGTCTTCTCCGGTTTTTATGTGCTTCACGGTGATGCCATCGGCAGGAAGAATCGACTGTAGTTTCTTTCTCCAGGCTTCTTCGTCGTCGAACAGTCCGTTTTCCTCGGCGTTCTTCAGCGATGCCTCGGAAAACTTGAGGTGTTCGATGAGTTCCGTATCGGAGTAGTGGAAAAGAAGATCGTCATGAATCAGAGGCTGCCGAGGAACGATACAAAACAAATGAATAAGCCTCTCCGCCGGCTCACCGACATGACTACGAACGACATCACGGCCTGTGGAAGGATCGAAAATGGCGAGATTGACATAGGAATTGGAATACGCCGAGTGGAAGAGGCCGCAGAGGCAAACCGGCTCCTGCGCTTTCCAGATTTTGAGAATACGGTAGATGTCGACAAGGTGATCGAGGAAGGTGCCGTGCTTGTGCCAGCACTCACCGGCGCCGACGGAGCGGAGGACGGAGATAAGAGAAGGAAGTTGGCGTTAACCTTGTCAAGCTCGCCGCGGAGGAAGGGACGAACAGAGGCTAACAGGACCTGGAAGTGGGGGTTCTCCGGCGACGGTGGAGTGGAGTAA

mRNA sequence

ATGGCCGGCGGAGGATCGTCGAAGTCGAGGAAGAGAGTGGAGGCCACTCCGGCGGATGCCGCCGCCGCCACTGGCCCCTCCCTCGTTCGAGCCAAAGACGGCAGTGCTTTCGCTCGATGTGATGAGTGCGGCAAGAGTGTTCCGGTAGCCCTTATCAGCATGCACAGTTGTAGCCTTGACGCCAAAATAAGAATGAATTTGGAGGCTCAGACTGTTGAGAAGCAAACTCAAGCTAAAAAGCCAGCCGAAAGGAAAAGATCAGCATCATCTGAGCCTAAGGCTAAAAAATCCAAAACAGAAAAGAGGGGGAAGAAAGACAAAGATCCAAATGCCCCCAAACGCCCTCCCACGGCCTTCTTTATCTTCATGGACGACTTCAGAAAATCCTATAAAGAAGCAAATCCCGATTCTAAAGGCGTTAAGGAGGTTGCAAAGGAGGGTGGTGAGAAATGGAAGTCAATGACTGATGAAGAGAAGAAGCCTTACCAAGATAAAGCCGCTGAGCTGAAAGCAGAATACGAAAAAGCCTTGGAAAATCGCAATGCTGAAAATGAAGATGATGAAAAAGAGGCAGAAGAGGCCGTAGAGAAGGAGGTAGAAGAAATATCAGATGAAGAGCCCAAGTTGAGGATTCCCCATGAGGTATTGACCCAAGACTTCTCCTTAGCTTTCATCAGCAGCACTCTCCCCCAAGCAATCCAGTCGTCCCATGGCATCCTCTTGTCCCAAGCGCTGCCCCATTCCAGCATCAGCCTCACCCCTTCCTCAGCCTCCCTCTCCGCCTCCTCAAACCGCCCCTTCCCCAAATACAGCTGCCCCAACGCCACATGCGGCTCCCCCACGAACGGATTCTTCTCCACGCATCTCACCAGCAACTCCTCACTTCTCTCGGACATTTCACAAACACCTTCCCAGTACAATTCTCTTGCGGCTATTTGGTCCTTTGCGTCAAGAATTTTCGTGCAGTTCTCGAAAATTGGTGGAATTACCAGCTCTAAATCCTCGTCTCTCTCTGTTTTGAGCCCCAAATCGCCGGTTTTCTTCCTCTCCGAAGAGTTGATCGCTGAAATCGGCCATTGTCATCATGAGGAAAATCGCAACCACTCTCCTCGAAACCACCACGTCTTCTCCGGTTTTTATGTGCTTCACGGCTTCTTCGTCGTCGAACAGTCCGTTTTCCTCGGCGTTCTTCAGCGATGCCTCGGAAAACTTGAGGTGTTCGATGAGTTCCGTATCGGAGTAGTGGAAAAGAAGATCGTCATGAATCAGAGGCTGCCGAGGAACGATACAAAACAAATGAATAAGCCTCTCCGCCGGCTCACCGACATGACTACGAACGACATCACGGCCTGTGGAAGGATCGAAAATGGCGAGATTGACATAGGAATTGGAATACGCCGAGTGGAAGAGGCCGCAGAGGCAAACCGGCTCCTGCGCTTTCCAGATTTTGAGAATACGGTAGATGTCGACAAGGTGATCGAGGAAGGTGCCGTGCTTGTGCCAGCACTCACCGGCGCCGACGGAGCGGAGGACGGAGATAAGAGAAGGAAGTTGGCGTTAACCTTGTCAAGCTCGCCGCGGAGGAAGGGACGAACAGAGGCTAACAGGACCTGGAAGTGGGGGTTCTCCGGCGACGGTGGAGTGGAGTAA

Coding sequence (CDS)

ATGGCCGGCGGAGGATCGTCGAAGTCGAGGAAGAGAGTGGAGGCCACTCCGGCGGATGCCGCCGCCGCCACTGGCCCCTCCCTCGTTCGAGCCAAAGACGGCAGTGCTTTCGCTCGATGTGATGAGTGCGGCAAGAGTGTTCCGGTAGCCCTTATCAGCATGCACAGTTGTAGCCTTGACGCCAAAATAAGAATGAATTTGGAGGCTCAGACTGTTGAGAAGCAAACTCAAGCTAAAAAGCCAGCCGAAAGGAAAAGATCAGCATCATCTGAGCCTAAGGCTAAAAAATCCAAAACAGAAAAGAGGGGGAAGAAAGACAAAGATCCAAATGCCCCCAAACGCCCTCCCACGGCCTTCTTTATCTTCATGGACGACTTCAGAAAATCCTATAAAGAAGCAAATCCCGATTCTAAAGGCGTTAAGGAGGTTGCAAAGGAGGGTGGTGAGAAATGGAAGTCAATGACTGATGAAGAGAAGAAGCCTTACCAAGATAAAGCCGCTGAGCTGAAAGCAGAATACGAAAAAGCCTTGGAAAATCGCAATGCTGAAAATGAAGATGATGAAAAAGAGGCAGAAGAGGCCGTAGAGAAGGAGGTAGAAGAAATATCAGATGAAGAGCCCAAGTTGAGGATTCCCCATGAGGTATTGACCCAAGACTTCTCCTTAGCTTTCATCAGCAGCACTCTCCCCCAAGCAATCCAGTCGTCCCATGGCATCCTCTTGTCCCAAGCGCTGCCCCATTCCAGCATCAGCCTCACCCCTTCCTCAGCCTCCCTCTCCGCCTCCTCAAACCGCCCCTTCCCCAAATACAGCTGCCCCAACGCCACATGCGGCTCCCCCACGAACGGATTCTTCTCCACGCATCTCACCAGCAACTCCTCACTTCTCTCGGACATTTCACAAACACCTTCCCAGTACAATTCTCTTGCGGCTATTTGGTCCTTTGCGTCAAGAATTTTCGTGCAGTTCTCGAAAATTGGTGGAATTACCAGCTCTAAATCCTCGTCTCTCTCTGTTTTGAGCCCCAAATCGCCGGTTTTCTTCCTCTCCGAAGAGTTGATCGCTGAAATCGGCCATTGTCATCATGAGGAAAATCGCAACCACTCTCCTCGAAACCACCACGTCTTCTCCGGTTTTTATGTGCTTCACGGCTTCTTCGTCGTCGAACAGTCCGTTTTCCTCGGCGTTCTTCAGCGATGCCTCGGAAAACTTGAGGTGTTCGATGAGTTCCGTATCGGAGTAGTGGAAAAGAAGATCGTCATGAATCAGAGGCTGCCGAGGAACGATACAAAACAAATGAATAAGCCTCTCCGCCGGCTCACCGACATGACTACGAACGACATCACGGCCTGTGGAAGGATCGAAAATGGCGAGATTGACATAGGAATTGGAATACGCCGAGTGGAAGAGGCCGCAGAGGCAAACCGGCTCCTGCGCTTTCCAGATTTTGAGAATACGGTAGATGTCGACAAGGTGATCGAGGAAGGTGCCGTGCTTGTGCCAGCACTCACCGGCGCCGACGGAGCGGAGGACGGAGATAAGAGAAGGAAGTTGGCGTTAACCTTGTCAAGCTCGCCGCGGAGGAAGGGACGAACAGAGGCTAACAGGACCTGGAAGTGGGGGTTCTCCGGCGACGGTGGAGTGGAGTAA

Protein sequence

MAGGGSSKSRKRVEATPADAAAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLEAQTVEKQTQAKKPAERKRSASSEPKAKKSKTEKRGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALENRNAENEDDEKEAEEAVEKEVEEISDEEPKLRIPHEVLTQDFSLAFISSTLPQAIQSSHGILLSQALPHSSISLTPSSASLSASSNRPFPKYSCPNATCGSPTNGFFSTHLTSNSSLLSDISQTPSQYNSLAAIWSFASRIFVQFSKIGGITSSKSSSLSVLSPKSPVFFLSEELIAEIGHCHHEENRNHSPRNHHVFSGFYVLHGFFVVEQSVFLGVLQRCLGKLEVFDEFRIGVVEKKIVMNQRLPRNDTKQMNKPLRRLTDMTTNDITACGRIENGEIDIGIGIRRVEEAAEANRLLRFPDFENTVDVDKVIEEGAVLVPALTGADGAEDGDKRRKLALTLSSSPRRKGRTEANRTWKWGFSGDGGVE

Homology

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BLAST of Sgr025886 vs. NCBI nr
Match: XP_022141388.1 (high mobility group B protein 7 [Momordica charantia])

HSP 1 Score: 342.4 bits (877), Expect = 7.1e-90
Identity = 191/206 (92.72%), Postives = 197/206 (95.63%), Query Frame = 0


Query: 1   MAGGGSSKSRKRVEATPADAAAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLD 60
           MAGGGSSKSRKRVEATPADAA ATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLD
Sbjct: 19  MAGGGSSKSRKRVEATPADAAVATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLD 78

Query: 61  AKIRMNLEAQTVEKQTQAKKPAERKRSASSEPKAKKSKTEKRGKKDKDPNAPKRPPTAFF 120
           AKIRMNLE+QTVEKQTQAKK +ERKRSASSEPKAKKSK EKRGKKD+DPNAPKRPPTAFF
Sbjct: 79  AKIRMNLESQTVEKQTQAKKSSERKRSASSEPKAKKSKVEKRGKKDRDPNAPKRPPTAFF 138

Query: 121 IFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALENR 180
           IFMDDFRKSYKE +PDSKG KEVAKEGGEKWKS+TDEEKKPYQDKAAELK+EYEKALEN 
Sbjct: 139 IFMDDFRKSYKEDHPDSKGGKEVAKEGGEKWKSLTDEEKKPYQDKAAELKSEYEKALENL 198

Query: 181 NAENEDDEKEAEEAVEKEVEEISDEE 207
             ENEDDEKEAEEA EKEVEEISDEE
Sbjct: 199 KNENEDDEKEAEEAAEKEVEEISDEE 224

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BLAST of Sgr025886 vs. NCBI nr
Match: XP_004150195.1 (high mobility group B protein 7 [Cucumis sativus] >KAE8648379.1 hypothetical protein Csa_023364 [Cucumis sativus])

HSP 1 Score: 338.6 bits (867), Expect = 1.0e-88
Identity = 190/208 (91.35%), Postives = 200/208 (96.15%), Query Frame = 0


Query: 1   MAGGGSSKSRKRVEATPADAAAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLD 60
           MAGGGSSKSRKRVEATPAD  AATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLD
Sbjct: 1   MAGGGSSKSRKRVEATPAD-VAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLD 60

Query: 61  AKIRMNLEAQTVEKQTQAKKPAERKRSASSEPKAKKSKTEKRGKKDKDPNAPKRPPTAFF 120
           AKIRMNLE+QTVEKQTQ+KKPAE+KRSASSEPK KKS+TEK+GKKDKDPNAPKRPPTAFF
Sbjct: 61  AKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEKKGKKDKDPNAPKRPPTAFF 120

Query: 121 IFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALENR 180
           IFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALE+R
Sbjct: 121 IFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALESR 180

Query: 181 NAENEDDEKEAEEA--VEKEVEEISDEE 207
           NAENEDDEKE EE   +E+EVE I++EE
Sbjct: 181 NAENEDDEKETEETEEIEEEVEGITEEE 207

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BLAST of Sgr025886 vs. NCBI nr
Match: XP_022938415.1 (high mobility group B protein 7-like [Cucurbita moschata])

HSP 1 Score: 337.4 bits (864), Expect = 2.3e-88
Identity = 190/207 (91.79%), Postives = 199/207 (96.14%), Query Frame = 0


Query: 1   MAGGGSSKSRKRVEATPADAAAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLD 60
           MAGGGSSKSRKRVEATPA AAA+TGPSLVRAKDGSAFARCDECGKSVP ALISMHSCSLD
Sbjct: 1   MAGGGSSKSRKRVEATPA-AAASTGPSLVRAKDGSAFARCDECGKSVPAALISMHSCSLD 60

Query: 61  AKIRMNLEAQTVEKQTQAKKPAERKRSASSEPKAKKSKTEKRGKKDKDPNAPKRPPTAFF 120
           AKIR NLEAQTVEKQTQAKKPAE+KRSA SEPKAKKS+TEKRGKKDKDPNAPKRPPTAFF
Sbjct: 61  AKIRTNLEAQTVEKQTQAKKPAEKKRSAPSEPKAKKSRTEKRGKKDKDPNAPKRPPTAFF 120

Query: 121 IFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKAL-EN 180
           +FMDDFRKSYKEA+PDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKAL E+
Sbjct: 121 VFMDDFRKSYKEAHPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALEES 180

Query: 181 RNAENEDDEKEAEEAVEKEVEEISDEE 207
           RNAENE+DEKE EE  EKEVEE++DEE
Sbjct: 181 RNAENEEDEKETEEVAEKEVEEVTDEE 206

[Close]

BLAST of Sgr025886 vs. NCBI nr
Match: XP_023550365.1 (high mobility group B protein 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 337.0 bits (863), Expect = 3.0e-88
Identity = 190/207 (91.79%), Postives = 198/207 (95.65%), Query Frame = 0


Query: 1   MAGGGSSKSRKRVEATPADAAAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLD 60
           MAGGGSSKSRKRVEATPA AAA TGPSLVRAKDGSAFARCDECGKSVP ALISMHSCSLD
Sbjct: 1   MAGGGSSKSRKRVEATPA-AAATTGPSLVRAKDGSAFARCDECGKSVPAALISMHSCSLD 60

Query: 61  AKIRMNLEAQTVEKQTQAKKPAERKRSASSEPKAKKSKTEKRGKKDKDPNAPKRPPTAFF 120
           AKIR NLEAQTVEKQTQAKKPAE+KRSA SEPKAKKS+TEKRGKKDKDPNAPKRPPTAFF
Sbjct: 61  AKIRTNLEAQTVEKQTQAKKPAEKKRSAPSEPKAKKSRTEKRGKKDKDPNAPKRPPTAFF 120

Query: 121 IFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKAL-EN 180
           +FMDDFRKSYKEA+PDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKAL E+
Sbjct: 121 VFMDDFRKSYKEAHPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALEES 180

Query: 181 RNAENEDDEKEAEEAVEKEVEEISDEE 207
           RNAENE+DEKE EE  EKEVEE++DEE
Sbjct: 181 RNAENEEDEKETEEVAEKEVEEVTDEE 206

[Close]

BLAST of Sgr025886 vs. NCBI nr
Match: XP_022992985.1 (high mobility group B protein 7-like [Cucurbita maxima])

HSP 1 Score: 335.5 bits (859), Expect = 8.7e-88
Identity = 189/207 (91.30%), Postives = 198/207 (95.65%), Query Frame = 0


Query: 1   MAGGGSSKSRKRVEATPADAAAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLD 60
           MAGGGSSKSRKRVEATPA AAA TGPSLVRAKDGSAFARCDECGKSVP ALISMHSCSLD
Sbjct: 1   MAGGGSSKSRKRVEATPA-AAAPTGPSLVRAKDGSAFARCDECGKSVPAALISMHSCSLD 60

Query: 61  AKIRMNLEAQTVEKQTQAKKPAERKRSASSEPKAKKSKTEKRGKKDKDPNAPKRPPTAFF 120
           AKIR NLEAQTV+KQTQAKKPAE+KRSA SEPKAKKS+TEKRGKKDKDPNAPKRPPTAFF
Sbjct: 61  AKIRTNLEAQTVDKQTQAKKPAEKKRSAPSEPKAKKSRTEKRGKKDKDPNAPKRPPTAFF 120

Query: 121 IFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKAL-EN 180
           +FMDDFRKSYKEA+PDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKAL E+
Sbjct: 121 VFMDDFRKSYKEAHPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALEES 180

Query: 181 RNAENEDDEKEAEEAVEKEVEEISDEE 207
           RNAENE+DEKE EE  EKEVEE++DEE
Sbjct: 181 RNAENEEDEKETEEVAEKEVEEVTDEE 206

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BLAST of Sgr025886 vs. ExPASy Swiss-Prot
Match: Q8LDF9 (High mobility group B protein 7 OS=Arabidopsis thaliana OX=3702 GN=HMGB7 PE=1 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.6e-42
Identity = 115/203 (56.65%), Postives = 147/203 (72.41%), Query Frame = 0


Query: 8   KSRKRVEATPADAAAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNL 67
           K RKRVE   A+ ++ T  +L RAKDGSAFA C+ C KSV VALISMH+CSLDAKIR+NL
Sbjct: 12  KQRKRVE---AETSSNTSTTLRRAKDGSAFALCEGCNKSVAVALISMHNCSLDAKIRVNL 71

Query: 68  EAQTVEKQTQA-KKPAERKRSASSEPKAKK-SKTEKRGKKDKDPNAPKRPPTAFFIFMDD 127
           EAQ VE Q +A KKPAE+K++ S  PK K+  KT    K     N PKRP TAFFIFM D
Sbjct: 72  EAQVVETQAEAKKKPAEKKKTTSDGPKPKRLKKTNDEKKSSSTSNKPKRPLTAFFIFMSD 131

Query: 128 FRKSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALENRNA--E 187
           FRK++K  +  S   K+ AK GGEKWKS+T+EEKK Y DKAAELKAEY K+LE+ +A  E
Sbjct: 132 FRKTFKSEHNGSL-AKDAAKIGGEKWKSLTEEEKKVYLDKAAELKAEYNKSLESNDADEE 191

Query: 188 NEDDEKEAEEAVEKEVEEISDEE 207
            ED+EK++++  + E +++ D++
Sbjct: 192 EEDEEKQSDDVDDAEEKQVDDDD 210

[Close]

BLAST of Sgr025886 vs. ExPASy Swiss-Prot
Match: O49595 (High mobility group B protein 1 OS=Arabidopsis thaliana OX=3702 GN=HMGB1 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.9e-17
Identity = 66/144 (45.83%), Postives = 90/144 (62.50%), Query Frame = 0


Query: 72  VEKQTQAKKPAE----RKRSASSEPKAKKSKTEKRGKKDKDPNAPKRPPTAFFIFMDDFR 131
           V+   +A KP +     KR A +E K  K +T K  K  KDPN PKR P+AFF+F++DFR
Sbjct: 10  VKTTKEALKPVDDRKVGKRKAPAE-KPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFR 69

Query: 132 KSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALE--NRNAENE 191
            ++K+ NP+ K V  V K GG+KWKSM+  EK PY++KAA+ KAEYEK ++  N+N E  
Sbjct: 70  VTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEG 129

Query: 192 DDEKEAEEAVEKEVEEISDEEPKL 210
            DE E   +   + +E S EE  L
Sbjct: 130 SDESEKSRSEINDEDEASGEEELL 152

[Close]

BLAST of Sgr025886 vs. ExPASy Swiss-Prot
Match: P93047 (High mobility group B protein 3 OS=Arabidopsis thaliana OX=3702 GN=HMGB3 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 9.2e-16
Identity = 58/125 (46.40%), Postives = 82/125 (65.60%), Query Frame = 0


Query: 84  RKRSASSEPKAKKSKTEKRGKKD--KDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVK 143
           + ++ +   K   +K   +G K   KDPN PKRP +AFF+FM+DFR +YKE +P +K V 
Sbjct: 5   KSKAETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVA 64

Query: 144 EVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALENRNAENEDDEKEAEEAVEKEVEE 203
            V K GGEKWKS++D EK PY  KA + K EYEK ++  N + E+  KE EE+ +K V E
Sbjct: 65  AVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEES-DKSVSE 124

Query: 204 ISDEE 207
           ++DE+
Sbjct: 125 VNDED 128

[Close]

BLAST of Sgr025886 vs. ExPASy Swiss-Prot
Match: P40619 (HMG1/2-like protein OS=Ipomoea nil OX=35883 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.0e-15
Identity = 54/114 (47.37%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 93  KAKKSKTEKRGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWK 152
           K + + T+K  K  KDPN PKRPP+AFF+FM+DFRK+YKE +P++K V  V K GG+KWK
Sbjct: 17  KKQAADTKKTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWK 76

Query: 153 SMTDEEKKPYQDKAAELKAEYEKALENRNAENEDDEKEAEEAVEKEVEEISDEE 207
            +T  EK P+  KA + K EYEK L+  N +      E EE+ +K   E++D++
Sbjct: 77  QLTAAEKAPFISKAEKRKQEYEKNLQAYNKKQAAGAAEEEES-DKSRSEVNDDD 129

[Close]

BLAST of Sgr025886 vs. ExPASy Swiss-Prot
Match: P40620 (HMG1/2-like protein OS=Vicia faba OX=3906 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.7e-15
Identity = 60/137 (43.80%), Postives = 88/137 (64.23%), Query Frame = 0


Query: 74  KQTQAKKPAERKRSASSEPKA--KKSKTEKRGKKDKDPNAPKRPPTAFFIFMDDFRKSYK 133
           K     K AE K + + +  A  K  K   +GK+ KDPN PKRPP+AFF+FM DFR+ YK
Sbjct: 5   KSKGESKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFREQYK 64

Query: 134 EANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALE--NRNAENEDDEK 193
           + +P++K V  V K  GE+WKS+++EEK PY D+A + K EYE  L+  N+  E +DDE+
Sbjct: 65  KDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYNKKLEGKDDEE 124

Query: 194 EAEEAVEKEVEEISDEE 207
            ++++  +  +E  DEE
Sbjct: 125 GSDKSKSEVNDEDEDEE 141

[Close]

BLAST of Sgr025886 vs. ExPASy TrEMBL
Match: A0A6J1CKD5 (high mobility group B protein 7 OS=Momordica charantia OX=3673 GN=LOC111011800 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 3.4e-90
Identity = 191/206 (92.72%), Postives = 197/206 (95.63%), Query Frame = 0


Query: 1   MAGGGSSKSRKRVEATPADAAAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLD 60
           MAGGGSSKSRKRVEATPADAA ATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLD
Sbjct: 19  MAGGGSSKSRKRVEATPADAAVATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLD 78

Query: 61  AKIRMNLEAQTVEKQTQAKKPAERKRSASSEPKAKKSKTEKRGKKDKDPNAPKRPPTAFF 120
           AKIRMNLE+QTVEKQTQAKK +ERKRSASSEPKAKKSK EKRGKKD+DPNAPKRPPTAFF
Sbjct: 79  AKIRMNLESQTVEKQTQAKKSSERKRSASSEPKAKKSKVEKRGKKDRDPNAPKRPPTAFF 138

Query: 121 IFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALENR 180
           IFMDDFRKSYKE +PDSKG KEVAKEGGEKWKS+TDEEKKPYQDKAAELK+EYEKALEN 
Sbjct: 139 IFMDDFRKSYKEDHPDSKGGKEVAKEGGEKWKSLTDEEKKPYQDKAAELKSEYEKALENL 198

Query: 181 NAENEDDEKEAEEAVEKEVEEISDEE 207
             ENEDDEKEAEEA EKEVEEISDEE
Sbjct: 199 KNENEDDEKEAEEAAEKEVEEISDEE 224

[Close]

BLAST of Sgr025886 vs. ExPASy TrEMBL
Match: A0A6J1FJR0 (high mobility group B protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC111444667 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.1e-88
Identity = 190/207 (91.79%), Postives = 199/207 (96.14%), Query Frame = 0


Query: 1   MAGGGSSKSRKRVEATPADAAAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLD 60
           MAGGGSSKSRKRVEATPA AAA+TGPSLVRAKDGSAFARCDECGKSVP ALISMHSCSLD
Sbjct: 1   MAGGGSSKSRKRVEATPA-AAASTGPSLVRAKDGSAFARCDECGKSVPAALISMHSCSLD 60

Query: 61  AKIRMNLEAQTVEKQTQAKKPAERKRSASSEPKAKKSKTEKRGKKDKDPNAPKRPPTAFF 120
           AKIR NLEAQTVEKQTQAKKPAE+KRSA SEPKAKKS+TEKRGKKDKDPNAPKRPPTAFF
Sbjct: 61  AKIRTNLEAQTVEKQTQAKKPAEKKRSAPSEPKAKKSRTEKRGKKDKDPNAPKRPPTAFF 120

Query: 121 IFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKAL-EN 180
           +FMDDFRKSYKEA+PDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKAL E+
Sbjct: 121 VFMDDFRKSYKEAHPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALEES 180

Query: 181 RNAENEDDEKEAEEAVEKEVEEISDEE 207
           RNAENE+DEKE EE  EKEVEE++DEE
Sbjct: 181 RNAENEEDEKETEEVAEKEVEEVTDEE 206

[Close]

BLAST of Sgr025886 vs. ExPASy TrEMBL
Match: A0A6J1JX92 (high mobility group B protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111489146 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 4.2e-88
Identity = 189/207 (91.30%), Postives = 198/207 (95.65%), Query Frame = 0


Query: 1   MAGGGSSKSRKRVEATPADAAAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLD 60
           MAGGGSSKSRKRVEATPA AAA TGPSLVRAKDGSAFARCDECGKSVP ALISMHSCSLD
Sbjct: 1   MAGGGSSKSRKRVEATPA-AAAPTGPSLVRAKDGSAFARCDECGKSVPAALISMHSCSLD 60

Query: 61  AKIRMNLEAQTVEKQTQAKKPAERKRSASSEPKAKKSKTEKRGKKDKDPNAPKRPPTAFF 120
           AKIR NLEAQTV+KQTQAKKPAE+KRSA SEPKAKKS+TEKRGKKDKDPNAPKRPPTAFF
Sbjct: 61  AKIRTNLEAQTVDKQTQAKKPAEKKRSAPSEPKAKKSRTEKRGKKDKDPNAPKRPPTAFF 120

Query: 121 IFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKAL-EN 180
           +FMDDFRKSYKEA+PDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKAL E+
Sbjct: 121 VFMDDFRKSYKEAHPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALEES 180

Query: 181 RNAENEDDEKEAEEAVEKEVEEISDEE 207
           RNAENE+DEKE EE  EKEVEE++DEE
Sbjct: 181 RNAENEEDEKETEEVAEKEVEEVTDEE 206

[Close]

BLAST of Sgr025886 vs. ExPASy TrEMBL
Match: A0A6J1GYR9 (high mobility group B protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC111458705 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.0e-81
Identity = 177/205 (86.34%), Postives = 186/205 (90.73%), Query Frame = 0


Query: 1   MAGGGSSKSRKRVEATPADAAAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLD 60
           MA   SS SRKRV+A P+D AA TGPSLVRAKDGSAFARC ECGKSVP ALISMHSCSLD
Sbjct: 1   MAVRRSSSSRKRVDAAPSD-AATTGPSLVRAKDGSAFARCGECGKSVPAALISMHSCSLD 60

Query: 61  AKIRMNLEAQTVEKQTQAKKPAERKRSASSEPKAKKSKTEKRGKKDKDPNAPKRPPTAFF 120
            KIRMNLEAQTVEKQTQAKKPAERKRSA SEPKA KSKT+KR KKDKDPNAPKRPPTAFF
Sbjct: 61  TKIRMNLEAQTVEKQTQAKKPAERKRSAPSEPKATKSKTDKRKKKDKDPNAPKRPPTAFF 120

Query: 121 IFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALENR 180
           IFM+DFRKS+KEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALE R
Sbjct: 121 IFMEDFRKSFKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALETR 180

Query: 181 NAENEDDEKEAEEAVEKEVEEISDE 206
           N ENEDDEK+ EE  EKE E+++DE
Sbjct: 181 NTENEDDEKDTEEVTEKEAEKVTDE 204

[Close]

BLAST of Sgr025886 vs. ExPASy TrEMBL
Match: A0A6J1JNZ6 (high mobility group B protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111487589 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.0e-81
Identity = 176/205 (85.85%), Postives = 188/205 (91.71%), Query Frame = 0


Query: 1   MAGGGSSKSRKRVEATPADAAAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLD 60
           MA   SS SRKRV+A P+D AA TGPSLVRAKDGSAFARCDECGKSVP ALISMHSCSLD
Sbjct: 43  MAVRRSSSSRKRVDAAPSD-AATTGPSLVRAKDGSAFARCDECGKSVPAALISMHSCSLD 102

Query: 61  AKIRMNLEAQTVEKQTQAKKPAERKRSASSEPKAKKSKTEKRGKKDKDPNAPKRPPTAFF 120
            KIRMNLEAQTVEKQTQAKKPAERKRSA SEPKA KSKT+KR KK+KDPNAPKRPPTAFF
Sbjct: 103 TKIRMNLEAQTVEKQTQAKKPAERKRSAPSEPKATKSKTDKRKKKNKDPNAPKRPPTAFF 162

Query: 121 IFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALENR 180
           IFMDD+RKS+KEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEY+KALE +
Sbjct: 163 IFMDDYRKSFKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYKKALETQ 222

Query: 181 NAENEDDEKEAEEAVEKEVEEISDE 206
           NAENEDDEK+ EE  E+E EE++DE
Sbjct: 223 NAENEDDEKDTEEVAEREAEEVTDE 246

[Close]

BLAST of Sgr025886 vs. TAIR 10
Match: AT5G23420.1 (high-mobility group box 6 )

HSP 1 Score: 174.9 bits (442), Expect = 1.8e-43
Identity = 115/203 (56.65%), Postives = 147/203 (72.41%), Query Frame = 0


Query: 8   KSRKRVEATPADAAAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNL 67
           K RKRVE   A+ ++ T  +L RAKDGSAFA C+ C KSV VALISMH+CSLDAKIR+NL
Sbjct: 12  KQRKRVE---AETSSNTSTTLRRAKDGSAFALCEGCNKSVAVALISMHNCSLDAKIRVNL 71

Query: 68  EAQTVEKQTQA-KKPAERKRSASSEPKAKK-SKTEKRGKKDKDPNAPKRPPTAFFIFMDD 127
           EAQ VE Q +A KKPAE+K++ S  PK K+  KT    K     N PKRP TAFFIFM D
Sbjct: 72  EAQVVETQAEAKKKPAEKKKTTSDGPKPKRLKKTNDEKKSSSTSNKPKRPLTAFFIFMSD 131

Query: 128 FRKSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALENRNA--E 187
           FRK++K  +  S   K+ AK GGEKWKS+T+EEKK Y DKAAELKAEY K+LE+ +A  E
Sbjct: 132 FRKTFKSEHNGSL-AKDAAKIGGEKWKSLTEEEKKVYLDKAAELKAEYNKSLESNDADEE 191

Query: 188 NEDDEKEAEEAVEKEVEEISDEE 207
            ED+EK++++  + E +++ D++
Sbjct: 192 EEDEEKQSDDVDDAEEKQVDDDD 210

[Close]

BLAST of Sgr025886 vs. TAIR 10
Match: AT3G51880.1 (high mobility group B1 )

HSP 1 Score: 91.7 bits (226), Expect = 2.0e-18
Identity = 66/144 (45.83%), Postives = 90/144 (62.50%), Query Frame = 0


Query: 72  VEKQTQAKKPAE----RKRSASSEPKAKKSKTEKRGKKDKDPNAPKRPPTAFFIFMDDFR 131
           V+   +A KP +     KR A +E K  K +T K  K  KDPN PKR P+AFF+F++DFR
Sbjct: 10  VKTTKEALKPVDDRKVGKRKAPAE-KPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFR 69

Query: 132 KSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALE--NRNAENE 191
            ++K+ NP+ K V  V K GG+KWKSM+  EK PY++KAA+ KAEYEK ++  N+N E  
Sbjct: 70  VTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEG 129

Query: 192 DDEKEAEEAVEKEVEEISDEEPKL 210
            DE E   +   + +E S EE  L
Sbjct: 130 SDESEKSRSEINDEDEASGEEELL 152

[Close]

BLAST of Sgr025886 vs. TAIR 10
Match: AT3G51880.3 (high mobility group B1 )

HSP 1 Score: 91.7 bits (226), Expect = 2.0e-18
Identity = 66/144 (45.83%), Postives = 90/144 (62.50%), Query Frame = 0


Query: 72  VEKQTQAKKPAE----RKRSASSEPKAKKSKTEKRGKKDKDPNAPKRPPTAFFIFMDDFR 131
           V+   +A KP +     KR A +E K  K +T K  K  KDPN PKR P+AFF+F++DFR
Sbjct: 10  VKTTKEALKPVDDRKVGKRKAPAE-KPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFR 69

Query: 132 KSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALE--NRNAENE 191
            ++K+ NP+ K V  V K GG+KWKSM+  EK PY++KAA+ KAEYEK ++  N+N E  
Sbjct: 70  VTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEG 129

Query: 192 DDEKEAEEAVEKEVEEISDEEPKL 210
            DE E   +   + +E S EE  L
Sbjct: 130 SDESEKSRSEINDEDEASGEEELL 152

[Close]

BLAST of Sgr025886 vs. TAIR 10
Match: AT3G51880.4 (high mobility group B1 )

HSP 1 Score: 91.3 bits (225), Expect = 2.6e-18
Identity = 65/141 (46.10%), Postives = 89/141 (63.12%), Query Frame = 0


Query: 72  VEKQTQAKKPAE----RKRSASSEPKAKKSKTEKRGKKDKDPNAPKRPPTAFFIFMDDFR 131
           V+   +A KP +     KR A +E K  K +T K  K  KDPN PKR P+AFF+F++DFR
Sbjct: 10  VKTTKEALKPVDDRKVGKRKAPAE-KPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFR 69

Query: 132 KSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALE--NRNAENE 191
            ++K+ NP+ K V  V K GG+KWKSM+  EK PY++KAA+ KAEYEK ++  N+N E  
Sbjct: 70  VTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEG 129

Query: 192 DDEKEAEEAVEKEVEEISDEE 207
            DE E   +   + +E S EE
Sbjct: 130 SDESEKSRSEINDEDEASGEE 149

[Close]

BLAST of Sgr025886 vs. TAIR 10
Match: AT3G51880.2 (high mobility group B1 )

HSP 1 Score: 89.7 bits (221), Expect = 7.7e-18
Identity = 64/140 (45.71%), Postives = 88/140 (62.86%), Query Frame = 0


Query: 72  VEKQTQAKKPAE----RKRSASSEPKAKKSKTEKRGKKDKDPNAPKRPPTAFFIFMDDFR 131
           V+   +A KP +     KR A +E K  K +T K  K  KDPN PKR P+AFF+F++DFR
Sbjct: 10  VKTTKEALKPVDDRKVGKRKAPAE-KPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFR 69

Query: 132 KSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALE--NRNAENE 191
            ++K+ NP+ K V  V K GG+KWKSM+  EK PY++KAA+ KAEYEK ++  N+N E  
Sbjct: 70  VTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEG 129

Query: 192 DDEKEAEEAVEKEVEEISDE 206
            DE E   +   + +E S E
Sbjct: 130 SDESEKSRSEINDEDEASGE 148

The following BLAST results are available for this feature:

BLAST of Sgr025886 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141388.1	7.1e-90	92.72	high mobility group B protein 7 [Momordica charantia]	[more]
XP_004150195.1	1.0e-88	91.35	high mobility group B protein 7 [Cucumis sativus] >KAE8648379.1 hypothetical pro...	[more]
XP_022938415.1	2.3e-88	91.79	high mobility group B protein 7-like [Cucurbita moschata]	[more]
XP_023550365.1	3.0e-88	91.79	high mobility group B protein 7-like [Cucurbita pepo subsp. pepo]	[more]
XP_022992985.1	8.7e-88	91.30	high mobility group B protein 7-like [Cucurbita maxima]	[more]

BLAST of Sgr025886 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDF9	2.6e-42	56.65	High mobility group B protein 7 OS=Arabidopsis thaliana OX=3702 GN=HMGB7 PE=1 SV...	[more]
O49595	2.9e-17	45.83	High mobility group B protein 1 OS=Arabidopsis thaliana OX=3702 GN=HMGB1 PE=1 SV...	[more]
P93047	9.2e-16	46.40	High mobility group B protein 3 OS=Arabidopsis thaliana OX=3702 GN=HMGB3 PE=1 SV...	[more]
P40619	2.0e-15	47.37	HMG1/2-like protein OS=Ipomoea nil OX=35883 PE=2 SV=1	[more]
P40620	2.7e-15	43.80	HMG1/2-like protein OS=Vicia faba OX=3906 PE=2 SV=1	[more]

BLAST of Sgr025886 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CKD5	3.4e-90	92.72	high mobility group B protein 7 OS=Momordica charantia OX=3673 GN=LOC111011800 P...	[more]
A0A6J1FJR0	1.1e-88	91.79	high mobility group B protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC1114446...	[more]
A0A6J1JX92	4.2e-88	91.30	high mobility group B protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111489146...	[more]
A0A6J1GYR9	1.0e-81	86.34	high mobility group B protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC1114587...	[more]
A0A6J1JNZ6	1.0e-81	85.85	high mobility group B protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111487589...	[more]

BLAST of Sgr025886 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23420.1	1.8e-43	56.65	high-mobility group box 6	[more]
AT3G51880.1	2.0e-18	45.83	high mobility group B1	[more]
AT3G51880.3	2.0e-18	45.83	high mobility group B1	[more]
AT3G51880.4	2.6e-18	46.10	high mobility group B1	[more]
AT3G51880.2	7.7e-18	45.71	high mobility group B1	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 159..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 520..549
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..163
None	No IPR available	PANTHER	PTHR47658:SF1	HIGH MOBILITY GROUP B PROTEIN 12-RELATED	coord: 6..201
None	No IPR available	PANTHER	PTHR47658	HIGH MOBILITY GROUP B PROTEIN 12-RELATED	coord: 6..201
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 112..178 e-value: 5.16553E-28 score: 104.632
IPR009071	High mobility group box domain	SMART	SM00398	hmgende2	coord: 111..182 e-value: 5.2E-26 score: 102.4
IPR009071	High mobility group box domain	PFAM	PF00505	HMG_box	coord: 112..180 e-value: 2.4E-21 score: 75.9
IPR009071	High mobility group box domain	PROSITE	PS50118	HMG_BOX_2	coord: 112..181 score: 19.588352
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 93..197 e-value: 6.9E-26 score: 92.5
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 103..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr025886.1	Sgr025886.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding