Sgr025644 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr025644
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	UV radiation resistance-associated gene protein
Location	tig00152936: 1426194 .. 1426439 (-)
RNA-Seq Expression	Sgr025644
Synteny	Sgr025644

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACGCGGCAAAGCCCCTTCTTCGTCTTCAGAGTCCAGCAGAATTTCGGATCCGGGAAATGCGAAGCTAATTGAATGGGAGGACTTCGAGCAGGAGCTTGCGAGGTTATGGAGTCTCTCTTCCGCACTCGAGGAAGCCAAGCAACAGAAAGAAACTCTAAAGCAAAAGCTCGACTGCCTAATTCAGGTTTTTCTTTCTTTTTTTTTTTTTTTTTGCCTAACAGATTCGATATTGACGGCTTAG

mRNA sequence

ATGGAACGCGGCAAAGCCCCTTCTTCGTCTTCAGAGTCCAGCAGAATTTCGGATCCGGGAAATGCGAAGCTAATTGAATGGGAGGACTTCGAGCAGGAGCTTGCGAGGTTATGGAGTCTCTCTTCCGCACTCGAGGAAGCCAAGCAACAGAAAGAAACTCTAAAGCAAAAGCTCGACTGCCTAATTCAGGTTTTTCTTTCTTTTTTTTTTTTTTTTTGCCTAACAGATTCGATATTGACGGCTTAG

Coding sequence (CDS)

ATGGAACGCGGCAAAGCCCCTTCTTCGTCTTCAGAGTCCAGCAGAATTTCGGATCCGGGAAATGCGAAGCTAATTGAATGGGAGGACTTCGAGCAGGAGCTTGCGAGGTTATGGAGTCTCTCTTCCGCACTCGAGGAAGCCAAGCAACAGAAAGAAACTCTAAAGCAAAAGCTCGACTGCCTAATTCAGGTTTTTCTTTCTTTTTTTTTTTTTTTTTGCCTAACAGATTCGATATTGACGGCTTAG

Protein sequence

MERGKAPSSSSESSRISDPGNAKLIEWEDFEQELARLWSLSSALEEAKQQKETLKQKLDCLIQVFLSFFFFFCLTDSILTA

Homology

[Close]

BLAST of Sgr025644 vs. NCBI nr
Match: XP_022138809.1 (UV radiation resistance-associated gene protein [Momordica charantia])

HSP 1 Score: 107.8 bits (268), Expect = 4.3e-20
Identity = 59/67 (88.06%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1  MERGKAPSSS---SESSRISDPGNAKLIEWEDFEQELARLWSLSSALEEAKQQKETLKQK 60
          MERGKAPSSS   SESSRISDP NAK++EWEDFEQELARLWSLSSALEEAK QKETLKQK
Sbjct: 1  MERGKAPSSSSSPSESSRISDPENAKVVEWEDFEQELARLWSLSSALEEAKHQKETLKQK 60

Query: 61 LDCLIQV 65
          LD LIQV
Sbjct: 61 LDSLIQV 67

[Close]

BLAST of Sgr025644 vs. NCBI nr
Match: XP_038906453.1 (UV radiation resistance-associated gene protein [Benincasa hispida])

HSP 1 Score: 107.1 bits (266), Expect = 7.4e-20
Identity = 58/65 (89.23%), Postives = 61/65 (93.85%), Query Frame = 0


Query: 1  MERGKAP-SSSSESSRISDPGNAKLIEWEDFEQELARLWSLSSALEEAKQQKETLKQKLD 60
          MERGK P SSSSESSR+SDP NAK+IEWEDFEQELARLWSLSSALEEAKQQKE+LKQKLD
Sbjct: 1  MERGKPPSSSSSESSRLSDPDNAKVIEWEDFEQELARLWSLSSALEEAKQQKESLKQKLD 60

Query: 61 CLIQV 65
           LIQV
Sbjct: 61 SLIQV 65

[Close]

BLAST of Sgr025644 vs. NCBI nr
Match: XP_023006360.1 (UV radiation resistance-associated gene protein [Cucurbita maxima])

HSP 1 Score: 104.0 bits (258), Expect = 6.3e-19
Identity = 56/64 (87.50%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1  MERGKAPSSSSESSRISDPGNAKLIEWEDFEQELARLWSLSSALEEAKQQKETLKQKLDC 60
          MERGK  SSSSESSR SDP NAK+IEWEDFEQELARLWSLSSALEEAKQ KE+LKQKLD 
Sbjct: 1  MERGKPLSSSSESSRSSDPENAKVIEWEDFEQELARLWSLSSALEEAKQHKESLKQKLDS 60

Query: 61 LIQV 65
          LIQV
Sbjct: 61 LIQV 64

[Close]

BLAST of Sgr025644 vs. NCBI nr
Match: KAG6574859.1 (UV radiation resistance-associated protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 102.8 bits (255), Expect = 1.4e-18
Identity = 55/64 (85.94%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1  MERGKAPSSSSESSRISDPGNAKLIEWEDFEQELARLWSLSSALEEAKQQKETLKQKLDC 60
          MERGK  SSSSESSR SDP NAK+IEWEDFEQELARLWSLSSAL+EAKQ KE+LKQKLD 
Sbjct: 1  MERGKPLSSSSESSRSSDPENAKVIEWEDFEQELARLWSLSSALQEAKQHKESLKQKLDS 60

Query: 61 LIQV 65
          LIQV
Sbjct: 61 LIQV 64

[Close]

BLAST of Sgr025644 vs. NCBI nr
Match: XP_022959420.1 (UV radiation resistance-associated gene protein [Cucurbita moschata])

HSP 1 Score: 102.8 bits (255), Expect = 1.4e-18
Identity = 55/64 (85.94%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1  MERGKAPSSSSESSRISDPGNAKLIEWEDFEQELARLWSLSSALEEAKQQKETLKQKLDC 60
          MERGK  SSSSESSR SDP NAK+IEWEDFEQELARLWSLSSAL+EAKQ KE+LKQKLD 
Sbjct: 1  MERGKPLSSSSESSRSSDPENAKVIEWEDFEQELARLWSLSSALQEAKQHKESLKQKLDS 60

Query: 61 LIQV 65
          LIQV
Sbjct: 61 LIQV 64

[Close]

BLAST of Sgr025644 vs. ExPASy TrEMBL
Match: A0A6J1CB54 (UV radiation resistance-associated gene protein OS=Momordica charantia OX=3673 GN=LOC111009884 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.1e-20
Identity = 59/67 (88.06%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1  MERGKAPSSS---SESSRISDPGNAKLIEWEDFEQELARLWSLSSALEEAKQQKETLKQK 60
          MERGKAPSSS   SESSRISDP NAK++EWEDFEQELARLWSLSSALEEAK QKETLKQK
Sbjct: 1  MERGKAPSSSSSPSESSRISDPENAKVVEWEDFEQELARLWSLSSALEEAKHQKETLKQK 60

Query: 61 LDCLIQV 65
          LD LIQV
Sbjct: 61 LDSLIQV 67

[Close]

BLAST of Sgr025644 vs. ExPASy TrEMBL
Match: A0A6J1KZX0 (UV radiation resistance-associated gene protein OS=Cucurbita maxima OX=3661 GN=LOC111499115 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.0e-19
Identity = 56/64 (87.50%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1  MERGKAPSSSSESSRISDPGNAKLIEWEDFEQELARLWSLSSALEEAKQQKETLKQKLDC 60
          MERGK  SSSSESSR SDP NAK+IEWEDFEQELARLWSLSSALEEAKQ KE+LKQKLD 
Sbjct: 1  MERGKPLSSSSESSRSSDPENAKVIEWEDFEQELARLWSLSSALEEAKQHKESLKQKLDS 60

Query: 61 LIQV 65
          LIQV
Sbjct: 61 LIQV 64

[Close]

BLAST of Sgr025644 vs. ExPASy TrEMBL
Match: A0A6J1H683 (UV radiation resistance-associated gene protein OS=Cucurbita moschata OX=3662 GN=LOC111460405 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.7e-19
Identity = 55/64 (85.94%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1  MERGKAPSSSSESSRISDPGNAKLIEWEDFEQELARLWSLSSALEEAKQQKETLKQKLDC 60
          MERGK  SSSSESSR SDP NAK+IEWEDFEQELARLWSLSSAL+EAKQ KE+LKQKLD 
Sbjct: 1  MERGKPLSSSSESSRSSDPENAKVIEWEDFEQELARLWSLSSALQEAKQHKESLKQKLDS 60

Query: 61 LIQV 65
          LIQV
Sbjct: 61 LIQV 64

[Close]

BLAST of Sgr025644 vs. ExPASy TrEMBL
Match: A0A5D3DD46 (UV radiation resistance-associated gene protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G001010 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.1e-16
Identity = 48/57 (84.21%), Postives = 55/57 (96.49%), Query Frame = 0


Query: 8  SSSSESSRISDPGNAKLIEWEDFEQELARLWSLSSALEEAKQQKETLKQKLDCLIQV 65
          SSSS+S+R+SDP NAK+IEWEDFEQELARLWSLSSAL+EAKQQKE+LKQKLD LIQ+
Sbjct: 13 SSSSDSTRLSDPENAKVIEWEDFEQELARLWSLSSALQEAKQQKESLKQKLDSLIQI 69

[Close]

BLAST of Sgr025644 vs. ExPASy TrEMBL
Match: A0A1S3C5Q3 (UV radiation resistance-associated gene protein OS=Cucumis melo OX=3656 GN=LOC103496961 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.1e-16
Identity = 48/57 (84.21%), Postives = 55/57 (96.49%), Query Frame = 0


Query: 8  SSSSESSRISDPGNAKLIEWEDFEQELARLWSLSSALEEAKQQKETLKQKLDCLIQV 65
          SSSS+S+R+SDP NAK+IEWEDFEQELARLWSLSSAL+EAKQQKE+LKQKLD LIQ+
Sbjct: 13 SSSSDSTRLSDPENAKVIEWEDFEQELARLWSLSSALQEAKQQKESLKQKLDSLIQI 69

[Close]

BLAST of Sgr025644 vs. TAIR 10
Match: AT2G32760.1 (unknown protein; Has 229 Blast hits to 229 proteins in 104 species: Archae - 0; Bacteria - 2; Metazoa - 79; Fungi - 90; Plants - 49; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 9.6e-10
Identity = 31/56 (55.36%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 9  SSSESSRISDPGNAKLIEWEDFEQELARLWSLSSALEEAKQQKETLKQKLDCLIQV 65
          S SE+ R SD  + K+IEWE+F+ EL RLWSLSSA++ A ++K+ L+ KL+ LIQV
Sbjct: 8  SLSENLRRSDREDGKIIEWEEFDHELTRLWSLSSAMKLATERKQILQPKLESLIQV 63

The following BLAST results are available for this feature:

BLAST of Sgr025644 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138809.1	4.3e-20	88.06	UV radiation resistance-associated gene protein [Momordica charantia]	[more]
XP_038906453.1	7.4e-20	89.23	UV radiation resistance-associated gene protein [Benincasa hispida]	[more]
XP_023006360.1	6.3e-19	87.50	UV radiation resistance-associated gene protein [Cucurbita maxima]	[more]
KAG6574859.1	1.4e-18	85.94	UV radiation resistance-associated protein, partial [Cucurbita argyrosperma subs...	[more]
XP_022959420.1	1.4e-18	85.94	UV radiation resistance-associated gene protein [Cucurbita moschata]	[more]

BLAST of Sgr025644 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr025644 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CB54	2.1e-20	88.06	UV radiation resistance-associated gene protein OS=Momordica charantia OX=3673 G...	[more]
A0A6J1KZX0	3.0e-19	87.50	UV radiation resistance-associated gene protein OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1H683	6.7e-19	85.94	UV radiation resistance-associated gene protein OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5D3DD46	1.1e-16	84.21	UV radiation resistance-associated gene protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3C5Q3	1.1e-16	84.21	UV radiation resistance-associated gene protein OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Sgr025644 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32760.1	9.6e-10	55.36	unknown protein; Has 229 Blast hits to 229 proteins in 104 species: Archae - 0; ...	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 37..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr025644.1	Sgr025644.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071985	multivesicular body sorting pathway
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0035493	SNARE complex assembly
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005770	late endosome
cellular_component	GO:0000323	lytic vacuole
molecular_function	GO:0036313	phosphatidylinositol 3-kinase catalytic subunit binding
molecular_function	GO:1905394	retromer complex binding
molecular_function	GO:0000149	SNARE binding