Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCTTCTTTGGCTTTCATGGATGACCTGCTGGATTTCTCCTCAGACATCGGCGAGGAAGACGAAGAAGACGACGCCGTACCCTTTAACGTTAAGCCTAAAGCTACTGCTGCGGCGGCGGCTGACCCCTCCCAGTCGAACGCCTTCCACCCGGACGATTCTTCTTGCCGTCTTTTGCCTGTAAGTTTGAGCGTCATTTCACTTTCTCTGGAAACGACAGACGCCGCCGGGATATCTCCGGTGGGTTTCAGTTTTGAGACTTTTTTGGGGGGGGGGGGGAATGGACTCACTCGGGTGAGTTGCTGAGTTGACTCGCCTGGCCAAATCGCTGACGAGTCCCGAAAAATAAAGTAAAAGGAAAAAGTCTGGTGGTGGGTGGGTGGGTGGGTGGGATCCGTCGGATGGGGAGTACTCCACTTGTCATGGTGGAAAGACAGATATATCCTTGGAAACCCTCGACTGTTGGAGGGTATTTTGGTCATAATGGCATTTTTTTTTTTAATGGGCCCTTTTTGTGGTTCTGAGCTGTCGCCCGTTAGGTTAGAATTGTATGCTTGTAATAATAATATCCGAACCAAGTGGGTGGGAAATATCAATCTCTCTCTCTCTTCTTTATACGGGCACTCCCTGTTCCATAATTTCAGAGACAGTATCCCACTGAAATGACATTTTTACCCCCATTTCCAAACATGCCACCAACGAATACGACTCCGCTAAATTCGTCTTTTTGCTTCCCCCGGCAGTCACGCTTTTTCTCACCCTAATAATTTTCAAACAATAATAAATAAATTATTAAAATAAAATAACAATAATCTAATTTTTCATTATTATTATTAGTATTTATTGTTGCTGCTGTTATTATAAATTATTGAGTGCTTTCCCTAATCAGTGGCCTGGGGGCGAGTCAACCCGTTTGATTCAGGGCCGAGTTTGAGACCGAGTTGCTAAAAACTCGTTTCGTTTTGGCTTTTTGGGCGAATGAGCAGGATTATGCAGAGGAAGAACTCGAGTGGCTGTCGAACGAAGATGCATTTCCGGCCGTCGAGACGTTCGTCGACATTCTCTCCGACCAGCCGCCGCCGAGCGTCTCCAAGCAGAACAGTCCGGTGTCGGTTCTCGAGAACTCCTCAAGCAGCAGCCATAGCGACAACCACAATATCAGTAAAGCGAGCATCCATGGCAGTATTCTGATGAGCTGCTGCGGCGGCCTGAAAGTGCCCGGAAAGGCCCGCAGCAAGCGCCGCCGCAAGCACATTTCCGTCCACCAGCTCTGGTTCAAGCAACCCAGTAGCAGGAATGCGAAACAGCAGCAAGTATTACCCACCACGACGGCTACAGCGACGGCGACGGCGGCGGCGGGGGGAGTGGAGGGATGGGAAGAAAGTGCCTACATTGTGGAGCTGAGAAGACCCCTCAATGGCGGGCCGGGCCCCTCGGACCCAAAACGCTGTGTAATGCATGTGGGGTGAGGTTCAAATCCGGGAGGCTTGTGCCGGAGTACCGGCCGGCGAGTAGCCCGACGTTCTCGCCGGAGTTGCACTCGAATTCCCACCGGAAGGTGATGGAGATGAGGAGGCAGAAGCAGTTCGGTATGTTGGTGAACCCCATGGATAA
mRNA sequence
ATGGAGTCTTCTTTGGCTTTCATGGATGACCTGCTGGATTTCTCCTCAGACATCGGCGAGGAAGACGAAGAAGACGACGCCGTACCCTTTAACGTTAAGCCTAAAGCTACTGCTGCGGCGGCGGCTGACCCCTCCCAGTCGAACGCCTTCCACCCGGACGATTCTTCTTGCCGTCTTTTGCCTACGCCGCCGGGATATCTCCGGTGGGTTTCAGTTTTGAGACTTTTTTGGGGGGGGGGGGGAATGGACTCACTCGGGGCCGAGTTTGAGACCGAGTTGCTAAAAACTCGTTTCGTTTTGGCTTTTTGGGCGAATGAGCAGGATTATGCAGAGGAAGAACTCGAGTGGCTGTCGAACGAAGATGCATTTCCGGCCGTCGAGACGTTCGTCGACATTCTCTCCGACCAGCCGCCGCCGAGCGTCTCCAAGCAGAACAGTCCGGTGTCGGTTCTCGAGAACTCCTCAAGCAGCAGCCATAGCGACAACCACAATATCAGTAAAGCGAGCATCCATGGCAGTATTCTGATGAGCTGCTGCGGCGGCCTGAAAGTGCCCGGAAAGGCCCGCAGCAAGCGCCGCCGCAAGCACATTTCCGTCCACCAGCTCTGGTTCAAGCAACCCAGTAGCAGGAATGCGAAACAGCAGCAAGTATTACCCACCACGACGGCTACAGCGACGGCGACGGCGGCGGCGGGGGGAGTGGAGGGATGGGAAGAAAGTGCCTACATTGTGGAGCTGAGAAGACCCCTCAATGGCGGGCCGGGCCCCTCGGACCCAAAACGCTGTCCCGACGTTCTCGCCGGAGTTGCACTCGAATTCCCACCGGAAGGTGATGGAGATGAGGAGGCAGAAGCAGTTCGGTATGTTGGTGAACCCCATGGATAA
Coding sequence (CDS)
ATGGAGTCTTCTTTGGCTTTCATGGATGACCTGCTGGATTTCTCCTCAGACATCGGCGAGGAAGACGAAGAAGACGACGCCGTACCCTTTAACGTTAAGCCTAAAGCTACTGCTGCGGCGGCGGCTGACCCCTCCCAGTCGAACGCCTTCCACCCGGACGATTCTTCTTGCCGTCTTTTGCCTACGCCGCCGGGATATCTCCGGTGGGTTTCAGTTTTGAGACTTTTTTGGGGGGGGGGGGGAATGGACTCACTCGGGGCCGAGTTTGAGACCGAGTTGCTAAAAACTCGTTTCGTTTTGGCTTTTTGGGCGAATGAGCAGGATTATGCAGAGGAAGAACTCGAGTGGCTGTCGAACGAAGATGCATTTCCGGCCGTCGAGACGTTCGTCGACATTCTCTCCGACCAGCCGCCGCCGAGCGTCTCCAAGCAGAACAGTCCGGTGTCGGTTCTCGAGAACTCCTCAAGCAGCAGCCATAGCGACAACCACAATATCAGTAAAGCGAGCATCCATGGCAGTATTCTGATGAGCTGCTGCGGCGGCCTGAAAGTGCCCGGAAAGGCCCGCAGCAAGCGCCGCCGCAAGCACATTTCCGTCCACCAGCTCTGGTTCAAGCAACCCAGTAGCAGGAATGCGAAACAGCAGCAAGTATTACCCACCACGACGGCTACAGCGACGGCGACGGCGGCGGCGGGGGGAGTGGAGGGATGGGAAGAAAGTGCCTACATTGTGGAGCTGAGAAGACCCCTCAATGGCGGGCCGGGCCCCTCGGACCCAAAACGCTGTCCCGACGTTCTCGCCGGAGTTGCACTCGAATTCCCACCGGAAGGTGATGGAGATGAGGAGGCAGAAGCAGTTCGGTATGTTGGTGAACCCCATGGATAA
Protein sequence
MESSLAFMDDLLDFSSDIGEEDEEDDAVPFNVKPKATAAAAADPSQSNAFHPDDSSCRLLPTPPGYLRWVSVLRLFWGGGGMDSLGAEFETELLKTRFVLAFWANEQDYAEEELEWLSNEDAFPAVETFVDILSDQPPPSVSKQNSPVSVLENSSSSSHSDNHNISKASIHGSILMSCCGGLKVPGKARSKRRRKHISVHQLWFKQPSSRNAKQQQVLPTTTATATATAAAGGVEGWEESAYIVELRRPLNGGPGPSDPKRCPDVLAGVALEFPPEGDGDEEAEAVRYVGEPHG
Homology
BLAST of Sgr025609 vs. NCBI nr
Match:
KAG7013448.1 (GATA transcription factor 1 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 219.2 bits (557), Expect = 4.8e-53
Identity = 151/245 (61.63%), Postives = 159/245 (64.90%), Query Frame = 0
Query: 1 MESSLAFMDDLLDFSSDIGEEDEEDDAV-PFNVKPKA--TAAAAADPSQSNA-FHPDD-S 60
MESSLAFMDDLLDFSSDIG EDEEDDAV PF+VKPKA T AAA D S+ NA FHP+D S
Sbjct: 1 MESSLAFMDDLLDFSSDIGGEDEEDDAVPPFSVKPKAATTTAAATDSSEFNAGFHPEDSS 60
Query: 61 SCRLLPTPPGYLRWVSVLRLFWGGGGMDSLGAEFETELLKTRFVLAFWANEQDYAEEELE 120
SCR+LP E+DYAEEELE
Sbjct: 61 SCRVLP--------------------------------------------EEDYAEEELE 120
Query: 121 WLSNEDAFPAVETFVDILSD------QPPP--SVSKQNSPVSVLENSSSSSHSDNHNISK 180
WLSNED FPAVETFVDILSD QPP SVSKQNSPVSVLE +S SSH N K
Sbjct: 121 WLSNEDVFPAVETFVDILSDHHHDQPQPPSLMSVSKQNSPVSVLETTSISSHGGN----K 180
Query: 181 ASIHGSILMSCCGGLKVPGKARSKRRR-KHISVHQLWFK-QPSSRNAKQQQVLPTTTATA 231
S HGSILMSCC GLKVPGKARSKRRR +H+S H LWFK QPSSRN KQ Q PTTTAT
Sbjct: 181 PSAHGSILMSCCDGLKVPGKARSKRRRSRHVSGHHLWFKQQPSSRNVKQIQ--PTTTATG 195
BLAST of Sgr025609 vs. NCBI nr
Match:
XP_008460721.1 (PREDICTED: GATA transcription factor 1 [Cucumis melo])
HSP 1 Score: 217.6 bits (553), Expect = 1.4e-52
Identity = 155/277 (55.96%), Postives = 170/277 (61.37%), Query Frame = 0
Query: 1 MESSLAFMDDLLDFSSDIGEEDEEDDAV-PFNVKPKATAAAAADPSQSN--AFHPDD-SS 60
MESSLAFMDDLLDFSSDIGEEDEEDDAV PF+VK K+++ A D S N A HPDD SS
Sbjct: 1 MESSLAFMDDLLDFSSDIGEEDEEDDAVPPFSVKSKSSSTTAPDSSDLNAAAMHPDDSSS 60
Query: 61 CRLLPTPPGYLRWVSVLRLFWGGGGMDSLGAEFETELLKTRFVLAFWANEQDYAEEELEW 120
CR+LP E+DYAEEELEW
Sbjct: 61 CRVLP--------------------------------------------EEDYAEEELEW 120
Query: 121 LSNEDAFPAVETFVDILSD-------QPPP--SVSKQNSPVSVLENSSSSSHSDNHN-IS 180
LSNEDAFPAVETFVDILSD QPPP SVSKQNSPVSVLE++S SSH + N +
Sbjct: 121 LSNEDAFPAVETFVDILSDHHHHHAPQPPPLTSVSKQNSPVSVLESTSISSHGETINGGN 180
Query: 181 KASIHG-SILMSCCGGLKVPGKARSKRRR-KHISVHQLWFK-QPSSRNAKQQQVLPTTTA 240
K S+HG SILMSCCGGLKVPGKARSKRRR +HIS H LWFK QPSS+N K QV+P TT
Sbjct: 181 KTSVHGSSILMSCCGGLKVPGKARSKRRRGRHISGHHLWFKQQPSSKNLK--QVVP-TTE 230
Query: 241 TATATAAAGGVEGWEESAYIVELRRPLNGGPGPSDPK 261
TA A AA G G + GP PK
Sbjct: 241 TAAAVAATTGAAGIGRKCLHCGAEKTPQWRAGPFGPK 230
BLAST of Sgr025609 vs. NCBI nr
Match:
XP_038875635.1 (GATA transcription factor 1 [Benincasa hispida])
HSP 1 Score: 217.6 bits (553), Expect = 1.4e-52
Identity = 148/250 (59.20%), Postives = 163/250 (65.20%), Query Frame = 0
Query: 1 MESSLAFMDDLLDFSSDIGEEDEEDDAV-PFNVKPKATAAAAADPSQSN--AFHPDD-SS 60
MESSLAFMDDLLDFSSDIGEEDEEDD V PF+VKPK+++ AAD S+ N A HPDD SS
Sbjct: 1 MESSLAFMDDLLDFSSDIGEEDEEDDVVPPFSVKPKSSSTTAADSSELNAAAMHPDDSSS 60
Query: 61 CRLLPTPPGYLRWVSVLRLFWGGGGMDSLGAEFETELLKTRFVLAFWANEQDYAEEELEW 120
CR+LP E+DY EEELEW
Sbjct: 61 CRVLP--------------------------------------------EEDYGEEELEW 120
Query: 121 LSNEDAFPAVETFVDILSDQ-------PPP--SVSKQNSPVSVLENSSSSSHSD-NHNIS 180
LSNEDAFPAVETFVDILSD PPP SVSKQNSPVSVLE++S SSH + N+ +
Sbjct: 121 LSNEDAFPAVETFVDILSDHHHHAPPPPPPLTSVSKQNSPVSVLESTSISSHGETNNGGN 180
Query: 181 KASIH--GSILMSCCGGLKVPGKARSKRRR-KHISVHQLWFK-QPSSRNAKQQQVLPTTT 233
K S+H GSILMSCCGGLKVPGKARSKRRR +HIS H LWFK QPSS+N K Q V T T
Sbjct: 181 KMSVHGSGSILMSCCGGLKVPGKARSKRRRGRHISGHHLWFKQQPSSKNVK-QVVSTTAT 205
BLAST of Sgr025609 vs. NCBI nr
Match:
XP_023006311.1 (GATA transcription factor 1-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 216.5 bits (550), Expect = 3.1e-52
Identity = 149/241 (61.83%), Postives = 157/241 (65.15%), Query Frame = 0
Query: 1 MESSLAFMDDLLDFSSDIGEEDEEDDAV-PFNVKPKATAAAAADPSQSNA-FHPDD-SSC 60
MESSLAFMDDLLDFSSDIG EDEEDDAV PF+VKPK AAA D S+ NA FHP+D SSC
Sbjct: 1 MESSLAFMDDLLDFSSDIGGEDEEDDAVPPFSVKPK--AAAVTDSSEFNAGFHPEDSSSC 60
Query: 61 RLLPTPPGYLRWVSVLRLFWGGGGMDSLGAEFETELLKTRFVLAFWANEQDYAEEELEWL 120
R+LP E+DYAEEELEWL
Sbjct: 61 RVLP--------------------------------------------EEDYAEEELEWL 120
Query: 121 SNEDAFPAVETFVDILSD----QPPP--SVSKQNSPVSVLENSSSSSHSDNHNISKASIH 180
SNED FPAVETFVDILSD QPP SVSKQNSPVSVLE +S SSH N K S H
Sbjct: 121 SNEDVFPAVETFVDILSDHHHPQPPSLMSVSKQNSPVSVLETTSISSHGGN----KPSAH 180
Query: 181 GSILMSCCGGLKVPGKARSKRRR-KHISVHQLWFK-QPSSRNAKQQQVLPTTTATATATA 231
GSILMSCC GLKVPGKARSKRRR +HIS H LWFK QPSSRN K Q+LP T ATAT A
Sbjct: 181 GSILMSCCDGLKVPGKARSKRRRGRHISGHHLWFKQQPSSRNVK--QILPITIATATTAA 189
BLAST of Sgr025609 vs. NCBI nr
Match:
XP_023549360.1 (GATA transcription factor 1-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 216.5 bits (550), Expect = 3.1e-52
Identity = 149/243 (61.32%), Postives = 158/243 (65.02%), Query Frame = 0
Query: 1 MESSLAFMDDLLDFSSDIGEEDEEDDAV-PFNVKPKATAAAAA---DPSQSNA-FHPDD- 60
MESSLAFMDDLLDFSSDIG EDEEDDAV PF++KPKA AAA D S+ NA FHP+D
Sbjct: 1 MESSLAFMDDLLDFSSDIGGEDEEDDAVPPFSLKPKAATTAAAALTDSSEFNAGFHPEDS 60
Query: 61 SSCRLLPTPPGYLRWVSVLRLFWGGGGMDSLGAEFETELLKTRFVLAFWANEQDYAEEEL 120
SSCR+LP E+DYAEEEL
Sbjct: 61 SSCRVLP--------------------------------------------EEDYAEEEL 120
Query: 121 EWLSNEDAFPAVETFVDILSD---QPPP--SVSKQNSPVSVLENSSSSSHSDNHNISKAS 180
EWLSNED FPAVETFVDILSD QPP SVSKQNSPVSVLE +S SSH N K S
Sbjct: 121 EWLSNEDVFPAVETFVDILSDHHPQPPSLMSVSKQNSPVSVLETTSISSHGGN----KPS 180
Query: 181 IHGSILMSCCGGLKVPGKARSKRRR-KHISVHQLWFK-QPSSRNAKQQQVLPTTTATATA 231
HGSILMSCC GLKVPGKARSKRRR +H+S H LWFK QPSSRN KQ Q P TTATAT
Sbjct: 181 AHGSILMSCCDGLKVPGKARSKRRRGRHVSGHHLWFKQQPSSRNVKQIQ--PITTATATT 193
BLAST of Sgr025609 vs. ExPASy Swiss-Prot
Match:
Q8LAU9 (GATA transcription factor 1 OS=Arabidopsis thaliana OX=3702 GN=GATA1 PE=2 SV=2)
HSP 1 Score: 72.0 bits (175), Expect = 1.3e-11
Identity = 50/103 (48.54%), Postives = 60/103 (58.25%), Query Frame = 0
Query: 111 EEELEWLSNEDAFPAVETFVDILSDQPPPSVS---------KQNSPVSVLENSSSSSHSD 170
EE+LEW+SN++AFP +ETFV +L + P S KQ SPVSVLE SS SS +
Sbjct: 58 EEDLEWISNKNAFPVIETFVGVLPSEHFPITSLLEREATEVKQLSPVSVLETSSHSSTTT 117
Query: 171 NHNISKASIHGS----------ILMSCCGGLKVPGKARSKRRR 195
N S S +GS +MSCC G K P KARSKRRR
Sbjct: 118 TSNSSGGS-NGSTAVATTTTTPTIMSCCVGFKAPAKARSKRRR 159
BLAST of Sgr025609 vs. ExPASy TrEMBL
Match:
A0A1S3CCM6 (GATA transcription factor OS=Cucumis melo OX=3656 GN=LOC103499483 PE=3 SV=1)
HSP 1 Score: 217.6 bits (553), Expect = 6.8e-53
Identity = 155/277 (55.96%), Postives = 170/277 (61.37%), Query Frame = 0
Query: 1 MESSLAFMDDLLDFSSDIGEEDEEDDAV-PFNVKPKATAAAAADPSQSN--AFHPDD-SS 60
MESSLAFMDDLLDFSSDIGEEDEEDDAV PF+VK K+++ A D S N A HPDD SS
Sbjct: 1 MESSLAFMDDLLDFSSDIGEEDEEDDAVPPFSVKSKSSSTTAPDSSDLNAAAMHPDDSSS 60
Query: 61 CRLLPTPPGYLRWVSVLRLFWGGGGMDSLGAEFETELLKTRFVLAFWANEQDYAEEELEW 120
CR+LP E+DYAEEELEW
Sbjct: 61 CRVLP--------------------------------------------EEDYAEEELEW 120
Query: 121 LSNEDAFPAVETFVDILSD-------QPPP--SVSKQNSPVSVLENSSSSSHSDNHN-IS 180
LSNEDAFPAVETFVDILSD QPPP SVSKQNSPVSVLE++S SSH + N +
Sbjct: 121 LSNEDAFPAVETFVDILSDHHHHHAPQPPPLTSVSKQNSPVSVLESTSISSHGETINGGN 180
Query: 181 KASIHG-SILMSCCGGLKVPGKARSKRRR-KHISVHQLWFK-QPSSRNAKQQQVLPTTTA 240
K S+HG SILMSCCGGLKVPGKARSKRRR +HIS H LWFK QPSS+N K QV+P TT
Sbjct: 181 KTSVHGSSILMSCCGGLKVPGKARSKRRRGRHISGHHLWFKQQPSSKNLK--QVVP-TTE 230
Query: 241 TATATAAAGGVEGWEESAYIVELRRPLNGGPGPSDPK 261
TA A AA G G + GP PK
Sbjct: 241 TAAAVAATTGAAGIGRKCLHCGAEKTPQWRAGPFGPK 230
BLAST of Sgr025609 vs. ExPASy TrEMBL
Match:
A0A6J1KXF9 (GATA transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111499085 PE=3 SV=1)
HSP 1 Score: 216.5 bits (550), Expect = 1.5e-52
Identity = 149/241 (61.83%), Postives = 157/241 (65.15%), Query Frame = 0
Query: 1 MESSLAFMDDLLDFSSDIGEEDEEDDAV-PFNVKPKATAAAAADPSQSNA-FHPDD-SSC 60
MESSLAFMDDLLDFSSDIG EDEEDDAV PF+VKPK AAA D S+ NA FHP+D SSC
Sbjct: 1 MESSLAFMDDLLDFSSDIGGEDEEDDAVPPFSVKPK--AAAVTDSSEFNAGFHPEDSSSC 60
Query: 61 RLLPTPPGYLRWVSVLRLFWGGGGMDSLGAEFETELLKTRFVLAFWANEQDYAEEELEWL 120
R+LP E+DYAEEELEWL
Sbjct: 61 RVLP--------------------------------------------EEDYAEEELEWL 120
Query: 121 SNEDAFPAVETFVDILSD----QPPP--SVSKQNSPVSVLENSSSSSHSDNHNISKASIH 180
SNED FPAVETFVDILSD QPP SVSKQNSPVSVLE +S SSH N K S H
Sbjct: 121 SNEDVFPAVETFVDILSDHHHPQPPSLMSVSKQNSPVSVLETTSISSHGGN----KPSAH 180
Query: 181 GSILMSCCGGLKVPGKARSKRRR-KHISVHQLWFK-QPSSRNAKQQQVLPTTTATATATA 231
GSILMSCC GLKVPGKARSKRRR +HIS H LWFK QPSSRN K Q+LP T ATAT A
Sbjct: 181 GSILMSCCDGLKVPGKARSKRRRGRHISGHHLWFKQQPSSRNVK--QILPITIATATTAA 189
BLAST of Sgr025609 vs. ExPASy TrEMBL
Match:
A0A6J1KVI4 (GATA transcription factor 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499085 PE=4 SV=1)
HSP 1 Score: 214.5 bits (545), Expect = 5.8e-52
Identity = 148/241 (61.41%), Postives = 156/241 (64.73%), Query Frame = 0
Query: 1 MESSLAFMDDLLDFSSDIGEEDEEDDAV-PFNVKPKATAAAAADPSQSNA-FHPDD-SSC 60
MESSLAFMDDLLDFSSDIG EDEEDDAV PF+VKPK AAA D S+ NA FHP+D SSC
Sbjct: 1 MESSLAFMDDLLDFSSDIGGEDEEDDAVPPFSVKPK--AAAVTDSSEFNAGFHPEDSSSC 60
Query: 61 RLLPTPPGYLRWVSVLRLFWGGGGMDSLGAEFETELLKTRFVLAFWANEQDYAEEELEWL 120
R+LP +DYAEEELEWL
Sbjct: 61 RVLP---------------------------------------------EDYAEEELEWL 120
Query: 121 SNEDAFPAVETFVDILSD----QPPP--SVSKQNSPVSVLENSSSSSHSDNHNISKASIH 180
SNED FPAVETFVDILSD QPP SVSKQNSPVSVLE +S SSH N K S H
Sbjct: 121 SNEDVFPAVETFVDILSDHHHPQPPSLMSVSKQNSPVSVLETTSISSHGGN----KPSAH 180
Query: 181 GSILMSCCGGLKVPGKARSKRRR-KHISVHQLWFK-QPSSRNAKQQQVLPTTTATATATA 231
GSILMSCC GLKVPGKARSKRRR +HIS H LWFK QPSSRN K Q+LP T ATAT A
Sbjct: 181 GSILMSCCDGLKVPGKARSKRRRGRHISGHHLWFKQQPSSRNVK--QILPITIATATTAA 188
BLAST of Sgr025609 vs. ExPASy TrEMBL
Match:
A0A6J1H6G5 (GATA transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111460465 PE=3 SV=1)
HSP 1 Score: 211.5 bits (537), Expect = 4.9e-51
Identity = 147/243 (60.49%), Postives = 155/243 (63.79%), Query Frame = 0
Query: 1 MESSLAFMDDLLDFSSDIGEEDEEDDAV-PFNVKPKATAAAAADPSQSNA-FHPDD-SSC 60
MESSLAFMDDLLDFSSDIG EDEEDDAV PF+VKPK AA D S+ NA FHP+D SSC
Sbjct: 1 MESSLAFMDDLLDFSSDIGGEDEEDDAVPPFSVKPK----AATDSSEFNAGFHPEDSSSC 60
Query: 61 RLLPTPPGYLRWVSVLRLFWGGGGMDSLGAEFETELLKTRFVLAFWANEQDYAEEELEWL 120
R+LP +DYAEEELEWL
Sbjct: 61 RVLP---------------------------------------------EDYAEEELEWL 120
Query: 121 SNEDAFPAVETFVDILSD------QPPP--SVSKQNSPVSVLENSSSSSHSDNHNISKAS 180
SNED FPAVETFVDILSD QPP SVSKQNSPVSVLE +S SSH N K S
Sbjct: 121 SNEDVFPAVETFVDILSDHHHDHPQPPSLMSVSKQNSPVSVLETTSISSHGGN----KPS 180
Query: 181 IHGSILMSCCGGLKVPGKARSKRRR-KHISVHQLWFK-QPSSRNAKQQQVLPTTTATATA 231
HGSILMSCC GLKVPGKARSKRRR +H+S H LWFK QPSSRN KQ Q P TTATAT
Sbjct: 181 AHGSILMSCCDGLKVPGKARSKRRRSRHVSGHHLWFKQQPSSRNVKQIQ--PITTATATT 188
BLAST of Sgr025609 vs. ExPASy TrEMBL
Match:
A0A0A0LKH9 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G162660 PE=4 SV=1)
HSP 1 Score: 206.1 bits (523), Expect = 2.1e-49
Identity = 150/277 (54.15%), Postives = 166/277 (59.93%), Query Frame = 0
Query: 1 MESSLAFMDDLLDFSSDIGEEDEEDDAV-PFNVKPKATAAAAADPSQSN--AFHPDD-SS 60
MESSLAFMDDLLDFSSDIGEEDEEDDAV PF+VKPK+++ A D S N A HPDD SS
Sbjct: 1 MESSLAFMDDLLDFSSDIGEEDEEDDAVPPFSVKPKSSSTTAPDSSDLNAAAMHPDDSSS 60
Query: 61 CRLLPTPPGYLRWVSVLRLFWGGGGMDSLGAEFETELLKTRFVLAFWANEQDYAEEELEW 120
CR+LP ++YAEEELEW
Sbjct: 61 CRVLP---------------------------------------------EEYAEEELEW 120
Query: 121 LSNEDAFPAVETFVDILSD-------QPP--PSVSKQNSPVSVLENSSSSSHSDNHN-IS 180
LSNEDAFPAVETFVDILSD QPP PSVSKQNSPVSVLE++S SSH + N +
Sbjct: 121 LSNEDAFPAVETFVDILSDHHHHHAPQPPPLPSVSKQNSPVSVLESTSISSHGETTNGGN 180
Query: 181 KASIH-GSILMSCCGGLKVPGKARSKRRR-KHISVHQLWFK-QPSSRNAKQQQVLPTTTA 240
K S+H SILMSCCG LKVP KARSKRRR +HIS H L FK QPSS+N K QV+P TTA
Sbjct: 181 KTSVHSSSILMSCCGSLKVPSKARSKRRRGRHISGHHLLFKQQPSSKNLK--QVVP-TTA 229
Query: 241 TATATAAAGGVEGWEESAYIVELRRPLNGGPGPSDPK 261
TA AA G G + GP PK
Sbjct: 241 TAAVVAATTGTAGIGRKCLHCGAEKTPQWRAGPFGPK 229
BLAST of Sgr025609 vs. TAIR 10
Match:
AT3G24050.1 (GATA transcription factor 1 )
HSP 1 Score: 72.0 bits (175), Expect = 8.9e-13
Identity = 50/103 (48.54%), Postives = 60/103 (58.25%), Query Frame = 0
Query: 111 EEELEWLSNEDAFPAVETFVDILSDQPPPSVS---------KQNSPVSVLENSSSSSHSD 170
EE+LEW+SN++AFP +ETFV +L + P S KQ SPVSVLE SS SS +
Sbjct: 58 EEDLEWISNKNAFPVIETFVGVLPSEHFPITSLLEREATEVKQLSPVSVLETSSHSSTTT 117
Query: 171 NHNISKASIHGS----------ILMSCCGGLKVPGKARSKRRR 195
N S S +GS +MSCC G K P KARSKRRR
Sbjct: 118 TSNSSGGS-NGSTAVATTTTTPTIMSCCVGFKAPAKARSKRRR 159
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7013448.1 | 4.8e-53 | 61.63 | GATA transcription factor 1 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_008460721.1 | 1.4e-52 | 55.96 | PREDICTED: GATA transcription factor 1 [Cucumis melo] | [more] |
XP_038875635.1 | 1.4e-52 | 59.20 | GATA transcription factor 1 [Benincasa hispida] | [more] |
XP_023006311.1 | 3.1e-52 | 61.83 | GATA transcription factor 1-like isoform X1 [Cucurbita maxima] | [more] |
XP_023549360.1 | 3.1e-52 | 61.32 | GATA transcription factor 1-like [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Q8LAU9 | 1.3e-11 | 48.54 | GATA transcription factor 1 OS=Arabidopsis thaliana OX=3702 GN=GATA1 PE=2 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3CCM6 | 6.8e-53 | 55.96 | GATA transcription factor OS=Cucumis melo OX=3656 GN=LOC103499483 PE=3 SV=1 | [more] |
A0A6J1KXF9 | 1.5e-52 | 61.83 | GATA transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111499085 PE=3 SV=1 | [more] |
A0A6J1KVI4 | 5.8e-52 | 61.41 | GATA transcription factor 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |
A0A6J1H6G5 | 4.9e-51 | 60.49 | GATA transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111460465 PE=3 SV=... | [more] |
A0A0A0LKH9 | 2.1e-49 | 54.15 | GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G162660 P... | [more] |
Match Name | E-value | Identity | Description | |
AT3G24050.1 | 8.9e-13 | 48.54 | GATA transcription factor 1 | [more] |