Sgr025427 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr025427
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00006406: 1237972 .. 1238430 (+)
RNA-Seq Expression	Sgr025427
Synteny	Sgr025427

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCCCAAATTCAAACTCTGCCCAAAAACCTTAGGAATCCCCCCTTCTCCTCTTTCTGCAATCCCCAAACTTGTGAAGGGGGTGTTTTCATCTTTTCTTTCAGCCATCATCGACATCGGAGCGGATGTCCTCACTCTGTCAAGTGCATGTTGAGATGAAAACAATGATCTAACCAACTGCACTAATTCTAAGCTCTCACTCACGGATCTCACCGAACCCAATTCAACTACTCCAACATCAGTCGGTACCAAGACGACCGTCCGAATTCCCGCAGATTTAGCCAGATACGATCTCACGCAATATTCAGACTGCGAATTGAGCACGTCCAAAAGCCAGATATGTTTCCCAGAAGCCAAACACTTTCCAGGGCCCCCCTCTCCACGAGGGAAGGAGAAATACATGGAAGCAAGAAAAAACATTTCTGTATCAGTAACTCGGTCCAATCCAAGAGCATAA

mRNA sequence

ATGTTCCCCAAATTCAAACTCTGCCCAAAAACCTTAGGAATCCCCCCTTCTCCTCTTTCTGCAATCCCCAAACTTGTGAAGGGGGTGTTTTCATCTTTTCTTTCAGCCATCATCGACATCGGAGCGGATGTCCTCACTCTGTCAATCGGTACCAAGACGACCGTCCGAATTCCCGCAGATTTAGCCAGATACGATCTCACGCAATATTCAGACTGCGAATTGAGCACGTCCAAAAGCCAGATATGTTTCCCAGAAGCCAAACACTTTCCAGGGCCCCCCTCTCCACGAGGGAAGGAGAAATACATGGAAGCAAGAAAAAACATTTCTGTATCAGTAACTCGGTCCAATCCAAGAGCATAA

Coding sequence (CDS)

ATGTTCCCCAAATTCAAACTCTGCCCAAAAACCTTAGGAATCCCCCCTTCTCCTCTTTCTGCAATCCCCAAACTTGTGAAGGGGGTGTTTTCATCTTTTCTTTCAGCCATCATCGACATCGGAGCGGATGTCCTCACTCTGTCAATCGGTACCAAGACGACCGTCCGAATTCCCGCAGATTTAGCCAGATACGATCTCACGCAATATTCAGACTGCGAATTGAGCACGTCCAAAAGCCAGATATGTTTCCCAGAAGCCAAACACTTTCCAGGGCCCCCCTCTCCACGAGGGAAGGAGAAATACATGGAAGCAAGAAAAAACATTTCTGTATCAGTAACTCGGTCCAATCCAAGAGCATAA

Protein sequence

MFPKFKLCPKTLGIPPSPLSAIPKLVKGVFSSFLSAIIDIGADVLTLSIGTKTTVRIPADLARYDLTQYSDCELSTSKSQICFPEAKHFPGPPSPRGKEKYMEARKNISVSVTRSNPRA

Homology

[Close]

BLAST of Sgr025427 vs. ExPASy TrEMBL
Match: A0A0A9GXG6 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.1e-06
Identity = 38/73 (52.05%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 50  GTKTTVRIPADLARYDLTQYSDCELS---TSKSQICFPEAKHFPGPPSPRGKEKYMEARK 109
           G KTTVR PAD AR   T +S    S   ++ +Q   PEA   PGPP+P G EKYM+ARK
Sbjct: 99  GRKTTVRRPADRARDARTYHSGAAASGWGSTVAQAWRPEASARPGPPAPSGNEKYMDARK 158

Query: 110 NISVSVTRSNPRA 120
            IS  VTRS+  A
Sbjct: 159 YISAPVTRSSRSA 171

[Close]

BLAST of Sgr025427 vs. ExPASy TrEMBL
Match: A0A0A9EJ02 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 4.3e-06
Identity = 37/73 (50.68%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 50  GTKTTVRIPADLARYDLTQYSDCELS---TSKSQICFPEAKHFPGPPSPRGKEKYMEARK 109
           G KTTVR PAD AR   T ++    S   ++ +Q   PEA   PGPP P G EKYM+ARK
Sbjct: 95  GRKTTVRSPADRARDARTYHTGAAASGWESTVAQAWRPEASARPGPPPPSGNEKYMDARK 154

Query: 110 NISVSVTRSNPRA 120
            IS  VTRS   A
Sbjct: 155 YISAPVTRSRRSA 167

The following BLAST results are available for this feature:

BLAST of Sgr025427 vs.


Match Name	E-value	Identity	Description

BLAST of Sgr025427 vs.


Match Name	E-value	Identity	Description

BLAST of Sgr025427 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A9GXG6	1.1e-06	52.05	Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1	[more]
A0A0A9EJ02	4.3e-06	50.68	Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1	[more]

BLAST of Sgr025427 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr025427.1	Sgr025427.1	mRNA