Sgr025403 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr025403
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Descriptionarabinogalactan peptide 20-like
Locationtig00006406: 1019953 .. 1020785 (-)
RNA-Seq ExpressionSgr025403
SyntenySgr025403
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATGTGCATTGACGAATGCCACACTGGCTTTTGCCGCTTTCTTCTATCTTCTCTCTATATAAATACCAATTCCACGTTATCGTCCGCCCCACTCTTCTCTCTCTCCTCTTGCTTTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCAACAGTTTCTCGTTTAGGCGTCGTCGGATCGGAGGTTGCAGAGATTTGTTTGGAGAGGGAGAGCAAAATGGCGTTCTCTAATTCTACGTCTAGGGCTTTCTCTGCCTTCTTCACCGTCTTCGCTCTCATCTTCTTCATTGTTTCGCCACTTGTTGACGCGCACTCTTCGGCCCCTGCTCCTGCTCCCCGCAAGCGACGGTATCAAGATCCGACTTCCTTCTTCTCTCTCTTTTCTTCCTCCTTTTGATTTCCGAATTCTTATTTCGTCAAATGTTATGTTTGCGAATTTGTTTTTCTTTTGTCTTCTTCGTCTTTTCTAATCTCTGATGCATACAAGGGGGATTTGTTCGATGATAATGAAGAGAATAGGTCTTTCAATTAGGGATTTCTGTTCTAGAAATATTGATTAGGAACATTATTACTTTTCTAGCATAAGCCATGCTTGCATTTCAAATACGGTTGGTTCGAAGGGAAACTATCCACAGGAATTTTCTAATTTGAAAGTGCGTCTTGTTCACGAACTGTAAAGTGAAATGCGTTGACATTGTGTATATAAACAGGGACCTCTATAGACCAAGGGATTGCTTACGTGCTGATGCTGGTGGCGTTGGTTCTCACATACCTCATCCACCCGCTCGATGCATCTTCCTACAACTTCTTTCTCAATTGATTCTAGGATACTAG

mRNA sequence

ATGGAAATGTGCATTGACGAATGCCACACTGGCTTTTGCCGCTTTCTTCTATCTTCTCTCTATATAAATACCAATTCCACGTTATCGTCCGCCCCACTCTTCTCTCTCTCCTCTTGCTTTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCAACAGTTTCTCGTTTAGGCGTCGTCGGATCGGAGGTTGCAGAGATTTGTTTGGAGAGGGAGAGCAAAATGGCGTTCTCTAATTCTACGTCTAGGGCTTTCTCTGCCTTCTTCACCGTCTTCGCTCTCATCTTCTTCATTGTTTCGCCACTTGTTGACGCGCACTCTTCGGCCCCTGCTCCTGCTCCCCGCAAGCGACGGGACCTCTATAGACCAAGGGATTGCTTACGTGCTGATGCTGGTGGCGTTGGTTCTCACATACCTCATCCACCCGCTCGATGCATCTTCCTACAACTTCTTTCTCAATTGATTCTAGGATACTAG

Coding sequence (CDS)

ATGGAAATGTGCATTGACGAATGCCACACTGGCTTTTGCCGCTTTCTTCTATCTTCTCTCTATATAAATACCAATTCCACGTTATCGTCCGCCCCACTCTTCTCTCTCTCCTCTTGCTTTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCAACAGTTTCTCGTTTAGGCGTCGTCGGATCGGAGGTTGCAGAGATTTGTTTGGAGAGGGAGAGCAAAATGGCGTTCTCTAATTCTACGTCTAGGGCTTTCTCTGCCTTCTTCACCGTCTTCGCTCTCATCTTCTTCATTGTTTCGCCACTTGTTGACGCGCACTCTTCGGCCCCTGCTCCTGCTCCCCGCAAGCGACGGGACCTCTATAGACCAAGGGATTGCTTACGTGCTGATGCTGGTGGCGTTGGTTCTCACATACCTCATCCACCCGCTCGATGCATCTTCCTACAACTTCTTTCTCAATTGATTCTAGGATACTAG

Protein sequence

MEMCIDECHTGFCRFLLSSLYINTNSTLSSAPLFSLSSCFLSLSLSLSPSTVSRLGVVGSEVAEICLERESKMAFSNSTSRAFSAFFTVFALIFFIVSPLVDAHSSAPAPAPRKRRDLYRPRDCLRADAGGVGSHIPHPPARCIFLQLLSQLILGY
Homology
BLAST of Sgr025403 vs. NCBI nr
Match: XP_022147463.1 (arabinogalactan peptide 20-like [Momordica charantia])

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-07
Identity = 36/45 (80.00%), Postives = 37/45 (82.22%), Query Frame = 0

Query: 73  MAFSNSTSRAFSAFFTVFALIFFIVSPLVDAHSSAPAPAPRKRRD 118
           MA S STSRAFS+ FT FALIFFIVSPLVDAHSSAPAPAP    D
Sbjct: 1   MASSISTSRAFSSLFTAFALIFFIVSPLVDAHSSAPAPAPAPASD 45

BLAST of Sgr025403 vs. NCBI nr
Match: KAF8380102.1 (hypothetical protein HHK36_027572 [Tetracentron sinense])

HSP 1 Score: 66.2 bits (160), Expect = 2.8e-07
Identity = 35/78 (44.87%), Postives = 43/78 (55.13%), Query Frame = 0

Query: 89  VFALIFFIVSPLVDAHSSAPAPAPRKR-----------------RDLYRPRDCLRADAGG 148
           + A+IF IV P V A + APAP+P                    R + RPRDC+ ADAGG
Sbjct: 3   IVAIIFSIVLPAVQAQAMAPAPSPTSDDTQFVLGLEDIMGLFSFRGINRPRDCICADAGG 62

Query: 149 VGSHIPHPPARCIFLQLL 150
            G+ IPHPP  C+ LQLL
Sbjct: 63  TGADIPHPPLGCLLLQLL 80

BLAST of Sgr025403 vs. NCBI nr
Match: XP_023528757.1 (arabinogalactan peptide 16-like [Cucurbita pepo subsp. pepo] >KAG7019041.1 Arabinogalactan peptide 16 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-06
Identity = 33/45 (73.33%), Postives = 34/45 (75.56%), Query Frame = 0

Query: 73  MAFSNSTSRAFSAFFTVFALIFFIVSPLVDAHSSAPAPAPRKRRD 118
           MA SNSTSRAFS  FT F LI FI+SPLVDAHSS PAPAP    D
Sbjct: 1   MASSNSTSRAFSGLFTFFTLILFILSPLVDAHSSVPAPAPAPASD 45

BLAST of Sgr025403 vs. NCBI nr
Match: XP_022924337.1 (arabinogalactan peptide 16-like [Cucurbita moschata] >KAG6582645.1 Arabinogalactan protein 16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 62.8 bits (151), Expect = 3.1e-06
Identity = 32/40 (80.00%), Postives = 33/40 (82.50%), Query Frame = 0

Query: 73  MAFSNSTSRAFSAFFTVFALIFFIVSPLVDAHSSAPAPAP 113
           MA SNSTSRAFS  FT F LI FI+SPLVDAHSS PAPAP
Sbjct: 1   MASSNSTSRAFSGLFTFFTLILFILSPLVDAHSSVPAPAP 40

BLAST of Sgr025403 vs. NCBI nr
Match: KAG6749594.1 (hypothetical protein POTOM_046652 [Populus tomentosa])

HSP 1 Score: 60.1 bits (144), Expect = 2.0e-05
Identity = 37/89 (41.57%), Postives = 44/89 (49.44%), Query Frame = 0

Query: 81  RAFSAFFTVFALIFFIVSPLVDAHSSAPAPAPRK--------------------RRDLYR 140
           +AF A   V +LI  +VSP V+A S APAPAP                      R D  R
Sbjct: 8   KAFIAVLAVVSLILAVVSPSVEAQSPAPAPAPTSDDSPFESPWGEILINARDSLRWDFSR 67

Query: 141 PRDCLRADAGGVGSHIPHPPARCIFLQLL 150
           PR+ + ADA G G+HIP  PARC  L  L
Sbjct: 68  PRNRIPADACGSGAHIPDSPARCFILHFL 96

BLAST of Sgr025403 vs. ExPASy TrEMBL
Match: A0A6J1D1D7 (arabinogalactan peptide 20-like OS=Momordica charantia OX=3673 GN=LOC111016381 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 6.0e-08
Identity = 36/45 (80.00%), Postives = 37/45 (82.22%), Query Frame = 0

Query: 73  MAFSNSTSRAFSAFFTVFALIFFIVSPLVDAHSSAPAPAPRKRRD 118
           MA S STSRAFS+ FT FALIFFIVSPLVDAHSSAPAPAP    D
Sbjct: 1   MASSISTSRAFSSLFTAFALIFFIVSPLVDAHSSAPAPAPAPASD 45

BLAST of Sgr025403 vs. ExPASy TrEMBL
Match: A0A6J1E8M6 (arabinogalactan peptide 16-like OS=Cucurbita moschata OX=3662 GN=LOC111431859 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.5e-06
Identity = 32/40 (80.00%), Postives = 33/40 (82.50%), Query Frame = 0

Query: 73  MAFSNSTSRAFSAFFTVFALIFFIVSPLVDAHSSAPAPAP 113
           MA SNSTSRAFS  FT F LI FI+SPLVDAHSS PAPAP
Sbjct: 1   MASSNSTSRAFSGLFTFFTLILFILSPLVDAHSSVPAPAP 40

BLAST of Sgr025403 vs. ExPASy TrEMBL
Match: A0A5N6QL69 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_003834 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.3e-05
Identity = 35/91 (38.46%), Postives = 45/91 (49.45%), Query Frame = 0

Query: 77  NSTSRAFSAFFTVFALIFFIVSP-LVDAHSSAPAPAPRK--------------------- 136
           +S+S A      +F L+  I+SP +VDA S APAPAP                       
Sbjct: 6   SSSSMAVIGVVAIFGLLLAILSPAVVDAQSPAPAPAPTSDGKLNPAFFRLDLKPWTLSIF 65

Query: 137 ----RRDLYRPRDCLRADAGGVGSHIPHPPA 142
                 D  RPRDC+RADA G G+H+PHPP+
Sbjct: 66  VVFVAGDFNRPRDCIRADARGAGAHVPHPPS 96

BLAST of Sgr025403 vs. ExPASy TrEMBL
Match: A0A5D3D0D1 (Arabinogalactan protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G005150 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.6e-05
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 0

Query: 73  MAFSNSTSRAFSAFFTVFALIFFIVSPLVDAHSSAPAPAPRKRRD 118
           MA SN T+RAF A FT+F+LIFFI+SPLVDA + APAPAP    D
Sbjct: 1   MASSNPTTRAFKALFTIFSLIFFILSPLVDAAAPAPAPAPAPSSD 45

BLAST of Sgr025403 vs. ExPASy TrEMBL
Match: A0A6J1IQM6 (arabinogalactan peptide 20-like OS=Cucurbita maxima OX=3661 GN=LOC111479127 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.2e-05
Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 0

Query: 73  MAFSNSTSRAFSAFFTVFALIFFIVSPLVDAHSSAPAPAP 113
           MA SNST RAFS  FT F LI FI+SPL+DAHSS P+PAP
Sbjct: 1   MASSNSTFRAFSGLFTFFTLILFILSPLIDAHSSVPSPAP 40

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022147463.11.2e-0780.00arabinogalactan peptide 20-like [Momordica charantia][more]
KAF8380102.12.8e-0744.87hypothetical protein HHK36_027572 [Tetracentron sinense][more]
XP_023528757.11.8e-0673.33arabinogalactan peptide 16-like [Cucurbita pepo subsp. pepo] >KAG7019041.1 Arabi... [more]
XP_022924337.13.1e-0680.00arabinogalactan peptide 16-like [Cucurbita moschata] >KAG6582645.1 Arabinogalact... [more]
KAG6749594.12.0e-0541.57hypothetical protein POTOM_046652 [Populus tomentosa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1D1D76.0e-0880.00arabinogalactan peptide 20-like OS=Momordica charantia OX=3673 GN=LOC111016381 P... [more]
A0A6J1E8M61.5e-0680.00arabinogalactan peptide 16-like OS=Cucurbita moschata OX=3662 GN=LOC111431859 PE... [more]
A0A5N6QL691.3e-0538.46Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_003834 PE=4 SV=1[more]
A0A5D3D0D11.6e-0566.67Arabinogalactan protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A6J1IQM62.2e-0572.50arabinogalactan peptide 20-like OS=Cucurbita maxima OX=3661 GN=LOC111479127 PE=4... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr025403.1Sgr025403.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane