Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCATCCGACTGAAACTTGAGATGGTGTTGTTGTTGATGATGATGAGGATGATCGTCTCTGTCGAGCTTGATGACATCAAAATCATTAACAGATCCTTGCTTGACATGCAACGACGAAGACGACGACAGAGAATCCTGCATTCCCCAAACATCAACGTCTTCATCCAAACTCTCCCTGTTATTATCACTCCCAAATTGCCCCACGAACGCCTCCGCCTCATACTGCTGAAGAAACTGATGCTGCTGCTGCTGCTGCTGCATTCCGCCGTACCCATTCAACGGATCGGGATCCAGAAGCACGACCTCGGCGGAAATGGGGTCGTGGCGCTGAGCCGCCGCCGCCGCAGCAGCAGCGGCGGCGGCGGCCTGCTGTTTACAAATGGCGAGTTGGTGGAGGACGATGTCGAGCTCGGCCTTGCTGTAGTCGATCTGGCGCTGGAGGTCGCGGATGATGCGGTAGCAGCCGCCGACGGGGTCGAGGGAGCGGACGTCGGACTGGAAGATGATGGTGCGCATGGCCTCTTCCTTCTCATAGGGGTCGAGATTCTTGATGATCTTGGTGATGTTACTGACGCCGAATAACTTATGGGCGTTCAAGAATTGGCGTTGGCGATCGTGGGGGAAATAAGGGGCGAGAATGCAGTCGGGGGCGCACTTTCTGCGCTGGTATTTGCAGGCGGCGCAGGCCTGGGTGGTGGCGGAGGAGGAGGAGGAGGTGGGGTGGGTTCTTGGAAGATGGTGGTGGTGGCTGCTGCTCATAATTTTAATTTGTTTCGAATTTTGTGGGGTGGGGCTGTTGGTGTTGGTGGGTATGGAGATATCGGCTGCGGCTGCGGCTCCGGCGGGGATGGCACCGTATTTTGTTCTGTTTTCTTTTGA
mRNA sequence
ATGATCATCCGACTGAAACTTGAGATGGTGTTGTTGTTGATGATGATGAGGATGATCGTCTCTGTCGAGCTTGATGACATCAAAATCATTAACAGATCCTTGCTTGACATGCAACGACGAAGACGACGACAGAGAATCCTGCATTCCCCAAACATCAACGTCTTCATCCAAACTCTCCCTGTTATTATCACTCCCAAATTGCCCCACGAACGCCTCCGCCTCATACTGCTGAAGAAACTGATGCTGCTGCTGCTGCTGCTGCATTCCGCCGTACCCATTCAACGGATCGGGATCCAGAAGCACGACCTCGGCGGAAATGGGGTCGTGGCGCTGAGCCGCCGCCGCCGCAGCAGCAGCGGCGGCGGCGGCCTGCTGTTTACAAATGGCGAGTTGGTGGAGGACGATGTCGAGCTCGGCCTTGCTGTAGTCGATCTGGCGCTGGAGGTCGCGGATGATGCGGTAGCAGCCGCCGACGGGGTCGAGGGAGCGGACGTCGGACTGGAAGATGATGGTGCGCATGGCCTCTTCCTTCTCATAGGGGTCGAGATTCTTGATGATCTTGAATTGGCGTTGGCGATCGTGGGGGAAATAAGGGGCGAGAATGCAGTCGGGGGCGCACTTTCTGCGCTGGTATTTGCAGGCGGCGCAGGCCTGGGTGGTGGCGGAGGAGGAGGAGGAGGTGGGGTGGGTTCTTGGAAGATGGTGGTGGTGGCTGCTGCTCATAATTTTAATTTGTTTCGAATTTTGTGGGGTGGGGCTGTTGGTGTTGGTGGGTATGGAGATATCGGCTGCGGCTGCGGCTCCGGCGGGGATGGCACCGTATTTTGTTCTGTTTTCTTTTGA
Coding sequence (CDS)
ATGATCATCCGACTGAAACTTGAGATGGTGTTGTTGTTGATGATGATGAGGATGATCGTCTCTGTCGAGCTTGATGACATCAAAATCATTAACAGATCCTTGCTTGACATGCAACGACGAAGACGACGACAGAGAATCCTGCATTCCCCAAACATCAACGTCTTCATCCAAACTCTCCCTGTTATTATCACTCCCAAATTGCCCCACGAACGCCTCCGCCTCATACTGCTGAAGAAACTGATGCTGCTGCTGCTGCTGCTGCATTCCGCCGTACCCATTCAACGGATCGGGATCCAGAAGCACGACCTCGGCGGAAATGGGGTCGTGGCGCTGAGCCGCCGCCGCCGCAGCAGCAGCGGCGGCGGCGGCCTGCTGTTTACAAATGGCGAGTTGGTGGAGGACGATGTCGAGCTCGGCCTTGCTGTAGTCGATCTGGCGCTGGAGGTCGCGGATGATGCGGTAGCAGCCGCCGACGGGGTCGAGGGAGCGGACGTCGGACTGGAAGATGATGGTGCGCATGGCCTCTTCCTTCTCATAGGGGTCGAGATTCTTGATGATCTTGAATTGGCGTTGGCGATCGTGGGGGAAATAAGGGGCGAGAATGCAGTCGGGGGCGCACTTTCTGCGCTGGTATTTGCAGGCGGCGCAGGCCTGGGTGGTGGCGGAGGAGGAGGAGGAGGTGGGGTGGGTTCTTGGAAGATGGTGGTGGTGGCTGCTGCTCATAATTTTAATTTGTTTCGAATTTTGTGGGGTGGGGCTGTTGGTGTTGGTGGGTATGGAGATATCGGCTGCGGCTGCGGCTCCGGCGGGGATGGCACCGTATTTTGTTCTGTTTTCTTTTGA
Protein sequence
MIIRLKLEMVLLLMMMRMIVSVELDDIKIINRSLLDMQRRRRRQRILHSPNINVFIQTLPVIITPKLPHERLRLILLKKLMLLLLLLHSAVPIQRIGIQKHDLGGNGVVALSRRRRSSSGGGGLLFTNGELVEDDVELGLAVVDLALEVADDAVAAADGVEGADVGLEDDGAHGLFLLIGVEILDDLELALAIVGEIRGENAVGGALSALVFAGGAGLGGGGGGGGGGVGSWKMVVVAAAHNFNLFRILWGGAVGVGGYGDIGCGCGSGGDGTVFCSVFF
Homology
BLAST of Sgr025296 vs. NCBI nr
Match:
CAN78640.1 (hypothetical protein VITISV_031739 [Vitis vinifera])
HSP 1 Score: 95.9 bits (237), Expect = 5.9e-16
Identity = 86/191 (45.03%), Postives = 108/191 (56.54%), Query Frame = 0
Query: 42 RRQRILHSPNINVFIQTLPVIITPKLPHERLRLILLKKLMLLLLLLHSAVPIQRIGIQKH 101
+R I+H P I++ + L L H +R+ +KK+MLL++++ + QRI I
Sbjct: 763 QRIDIMHDPCIDILVLLL-------LHHVIMRM-GMKKMMLLMMVIRT----QRIRI--- 822
Query: 102 DLGGNGVVALSRRRRSSSGGGGLLFTNGELVEDDVELGLAVVDLALEVADDAVAAADGVE 161
GNG GG G+++ED VEL L V+DLALEV DD VA ADGV
Sbjct: 823 --NGNGRWGFRYAGLLLLVGGA---AYGQVMEDKVELRLGVLDLALEVTDDTVATADGVG 882
Query: 162 GADVGLEDDGAHGLFLLIGVEILDDL-------------ELALAIVGEIRGENAVGGALS 220
GADV LE+DGAHGL L+ VE+ DDL ELALA V +IRGENAV GA S
Sbjct: 883 GADVRLENDGAHGLVLVRRVEVADDLGDVADPKQFMAVEELALATVRKIRGENAVRGAFS 933
BLAST of Sgr025296 vs. NCBI nr
Match:
PON48152.1 (hypothetical protein PanWU01x14_239400 [Parasponia andersonii])
HSP 1 Score: 89.0 bits (219), Expect = 7.2e-14
Identity = 76/159 (47.80%), Postives = 99/159 (62.26%), Query Frame = 0
Query: 77 LKKLMLLLLL---LHSAVPIQRIGIQKHDLGGNGVVALSRRRRSSSGGGGLLFTNGELVE 136
+K+L++L+++ +H+ + I+ +GG + R RSSS G T E++E
Sbjct: 1 MKELIMLMMMKPRMHAII------IEMIIMGGG-----TLRWRSSSCCGA---TKLEMLE 60
Query: 137 DDVELGLAVVDLALEVADDAVAAADGVEGADVGLEDDGAHGLFLLI-GVEILDDL----- 196
++VELGL V+LALEV DDAVAAA+GV GA VGLEDDGAHG+ L GVE+ DDL
Sbjct: 61 NEVELGLGEVNLALEVLDDAVAAANGVGGAGVGLEDDGAHGVVLGDGGVELPDDLGDVAD 120
Query: 197 --------ELALAIVGEIRGENAVGGALSALVFAGGAGL 219
EL L +VGE+RGENAV GAL ALV A A L
Sbjct: 121 AEELVRVEELPLRVVGEVRGENAVRGALPALVLACSASL 145
BLAST of Sgr025296 vs. NCBI nr
Match:
RWW56882.1 (hypothetical protein BHE74_00036373 [Ensete ventricosum])
HSP 1 Score: 88.6 bits (218), Expect = 9.4e-14
Identity = 74/168 (44.05%), Postives = 94/168 (55.95%), Query Frame = 0
Query: 120 GGGGLLFTNGELVEDDVELGLAVVDLALEVADDAVAAADGVEGADVGLEDDGAHGLFLLI 179
G G L +GEL + + EL +DL LEVADDAVA ADG+E +GL DG HG +L+
Sbjct: 106 GLGSLRTADGELPQHEGELIGVALDLVLEVADDAVATADGIESTHIGLVYDGFHGFGMLV 165
Query: 180 GVEILDDL-------------ELALAIVGEIRGENAVGGALSALVFAGGA-----GLGGG 239
G+E+ DD EL L + ++RGE AVG AL+ALVFAGGA GLGGG
Sbjct: 166 GIEVADDFEDVADAEQAVGVEELVLLVGRKVRGEAAVGVALAALVFAGGAGLGCGGLGGG 225
Query: 240 GGGGGGGVGSWKMVVVAAAHNFNLFRILWGGAVGVGGYGDIGCGCGSG 270
GGGGGGG + V+ A+ + + G+GD G G G G
Sbjct: 226 GGGGGGGRKAGGGVLAASCFGGSCMGCGASDHYKIEGWGDEG-GTGPG 272
BLAST of Sgr025296 vs. NCBI nr
Match:
RRT76571.1 (hypothetical protein B296_00016981 [Ensete ventricosum])
HSP 1 Score: 88.2 bits (217), Expect = 1.2e-13
Identity = 81/205 (39.51%), Postives = 106/205 (51.71%), Query Frame = 0
Query: 80 LMLLLLLLHSAVPIQRIGIQKHDLGGNGV---VALSRRRRSSSGGGGLLFTNGELVEDDV 139
++LL+LL++ I I H LG V + + + G G L +GEL + +
Sbjct: 15 VLLLILLVNRRENITTINHVIHILGRGRVKQKIRVDVQVGRDRGLGSLRTADGELPQHEG 74
Query: 140 ELGLAVVDLALEVADDAVAAADGVEGADVGLEDDGAHGLFLLIGVEILDDL--------- 199
EL +DL LEVADDAVA ADG+E +GL DG HG +L+G+E+ DD
Sbjct: 75 ELIGVALDLVLEVADDAVATADGIESTHIGLVYDGFHGFGMLVGIEVADDFEDIADAEQA 134
Query: 200 ----ELALAIVGEIRGENAVGGALSALVFAGGAGLGGGGGGGGGGVGSWKMVVVAAAHNF 259
EL L + ++RGE AVG AL+ALVFAGGAGLG GG GGGGG G
Sbjct: 135 VGVEELVLLVGRKVRGEAAVGVALAALVFAGGAGLGCGGLGGGGGGGGGG---------- 194
Query: 260 NLFRILWGGAVGVGGYGDIGCGCGS 269
R GG + +G GCG+
Sbjct: 195 ---RKAGGGVLAASCFGGSCMGCGA 206
BLAST of Sgr025296 vs. NCBI nr
Match:
RWV86912.1 (hypothetical protein GW17_00051143, partial [Ensete ventricosum])
HSP 1 Score: 88.2 bits (217), Expect = 1.2e-13
Identity = 81/205 (39.51%), Postives = 106/205 (51.71%), Query Frame = 0
Query: 80 LMLLLLLLHSAVPIQRIGIQKHDLGGNGV---VALSRRRRSSSGGGGLLFTNGELVEDDV 139
++LL+LL++ I I H LG V + + + G G L +GEL + +
Sbjct: 3 VLLLILLVNRRENITTINHVIHILGRGRVKQKIRVDVQVGRDRGLGSLRTADGELPQHEG 62
Query: 140 ELGLAVVDLALEVADDAVAAADGVEGADVGLEDDGAHGLFLLIGVEILDDL--------- 199
EL +DL LEVADDAVA ADG+E +GL DG HG +L+G+E+ DD
Sbjct: 63 ELIGVALDLVLEVADDAVATADGIESTHIGLVYDGFHGFGMLVGIEVADDFEDVADAEQA 122
Query: 200 ----ELALAIVGEIRGENAVGGALSALVFAGGAGLGGGGGGGGGGVGSWKMVVVAAAHNF 259
EL L + ++RGE AVG AL+ALVFAGGAGLG GG GGGGG G
Sbjct: 123 VGVEELVLLVGRKVRGEAAVGVALAALVFAGGAGLGCGGLGGGGGGGGGG---------- 182
Query: 260 NLFRILWGGAVGVGGYGDIGCGCGS 269
R GG + +G GCG+
Sbjct: 183 ---RKAGGGVLAASCFGGSCMGCGA 194
BLAST of Sgr025296 vs. ExPASy TrEMBL
Match:
A5B4B4 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_031739 PE=4 SV=1)
HSP 1 Score: 95.9 bits (237), Expect = 2.9e-16
Identity = 86/191 (45.03%), Postives = 108/191 (56.54%), Query Frame = 0
Query: 42 RRQRILHSPNINVFIQTLPVIITPKLPHERLRLILLKKLMLLLLLLHSAVPIQRIGIQKH 101
+R I+H P I++ + L L H +R+ +KK+MLL++++ + QRI I
Sbjct: 763 QRIDIMHDPCIDILVLLL-------LHHVIMRM-GMKKMMLLMMVIRT----QRIRI--- 822
Query: 102 DLGGNGVVALSRRRRSSSGGGGLLFTNGELVEDDVELGLAVVDLALEVADDAVAAADGVE 161
GNG GG G+++ED VEL L V+DLALEV DD VA ADGV
Sbjct: 823 --NGNGRWGFRYAGLLLLVGGA---AYGQVMEDKVELRLGVLDLALEVTDDTVATADGVG 882
Query: 162 GADVGLEDDGAHGLFLLIGVEILDDL-------------ELALAIVGEIRGENAVGGALS 220
GADV LE+DGAHGL L+ VE+ DDL ELALA V +IRGENAV GA S
Sbjct: 883 GADVRLENDGAHGLVLVRRVEVADDLGDVADPKQFMAVEELALATVRKIRGENAVRGAFS 933
BLAST of Sgr025296 vs. ExPASy TrEMBL
Match:
A0A2P5BH77 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_239400 PE=4 SV=1)
HSP 1 Score: 89.0 bits (219), Expect = 3.5e-14
Identity = 76/159 (47.80%), Postives = 99/159 (62.26%), Query Frame = 0
Query: 77 LKKLMLLLLL---LHSAVPIQRIGIQKHDLGGNGVVALSRRRRSSSGGGGLLFTNGELVE 136
+K+L++L+++ +H+ + I+ +GG + R RSSS G T E++E
Sbjct: 1 MKELIMLMMMKPRMHAII------IEMIIMGGG-----TLRWRSSSCCGA---TKLEMLE 60
Query: 137 DDVELGLAVVDLALEVADDAVAAADGVEGADVGLEDDGAHGLFLLI-GVEILDDL----- 196
++VELGL V+LALEV DDAVAAA+GV GA VGLEDDGAHG+ L GVE+ DDL
Sbjct: 61 NEVELGLGEVNLALEVLDDAVAAANGVGGAGVGLEDDGAHGVVLGDGGVELPDDLGDVAD 120
Query: 197 --------ELALAIVGEIRGENAVGGALSALVFAGGAGL 219
EL L +VGE+RGENAV GAL ALV A A L
Sbjct: 121 AEELVRVEELPLRVVGEVRGENAVRGALPALVLACSASL 145
BLAST of Sgr025296 vs. ExPASy TrEMBL
Match:
A0A427AK94 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00016981 PE=4 SV=1)
HSP 1 Score: 88.2 bits (217), Expect = 5.9e-14
Identity = 81/205 (39.51%), Postives = 106/205 (51.71%), Query Frame = 0
Query: 80 LMLLLLLLHSAVPIQRIGIQKHDLGGNGV---VALSRRRRSSSGGGGLLFTNGELVEDDV 139
++LL+LL++ I I H LG V + + + G G L +GEL + +
Sbjct: 15 VLLLILLVNRRENITTINHVIHILGRGRVKQKIRVDVQVGRDRGLGSLRTADGELPQHEG 74
Query: 140 ELGLAVVDLALEVADDAVAAADGVEGADVGLEDDGAHGLFLLIGVEILDDL--------- 199
EL +DL LEVADDAVA ADG+E +GL DG HG +L+G+E+ DD
Sbjct: 75 ELIGVALDLVLEVADDAVATADGIESTHIGLVYDGFHGFGMLVGIEVADDFEDIADAEQA 134
Query: 200 ----ELALAIVGEIRGENAVGGALSALVFAGGAGLGGGGGGGGGGVGSWKMVVVAAAHNF 259
EL L + ++RGE AVG AL+ALVFAGGAGLG GG GGGGG G
Sbjct: 135 VGVEELVLLVGRKVRGEAAVGVALAALVFAGGAGLGCGGLGGGGGGGGGG---------- 194
Query: 260 NLFRILWGGAVGVGGYGDIGCGCGS 269
R GG + +G GCG+
Sbjct: 195 ---RKAGGGVLAASCFGGSCMGCGA 206
BLAST of Sgr025296 vs. ExPASy TrEMBL
Match:
A0A444CM14 (Uncharacterized protein (Fragment) OS=Ensete ventricosum OX=4639 GN=GW17_00051143 PE=4 SV=1)
HSP 1 Score: 88.2 bits (217), Expect = 5.9e-14
Identity = 81/205 (39.51%), Postives = 106/205 (51.71%), Query Frame = 0
Query: 80 LMLLLLLLHSAVPIQRIGIQKHDLGGNGV---VALSRRRRSSSGGGGLLFTNGELVEDDV 139
++LL+LL++ I I H LG V + + + G G L +GEL + +
Sbjct: 3 VLLLILLVNRRENITTINHVIHILGRGRVKQKIRVDVQVGRDRGLGSLRTADGELPQHEG 62
Query: 140 ELGLAVVDLALEVADDAVAAADGVEGADVGLEDDGAHGLFLLIGVEILDDL--------- 199
EL +DL LEVADDAVA ADG+E +GL DG HG +L+G+E+ DD
Sbjct: 63 ELIGVALDLVLEVADDAVATADGIESTHIGLVYDGFHGFGMLVGIEVADDFEDVADAEQA 122
Query: 200 ----ELALAIVGEIRGENAVGGALSALVFAGGAGLGGGGGGGGGGVGSWKMVVVAAAHNF 259
EL L + ++RGE AVG AL+ALVFAGGAGLG GG GGGGG G
Sbjct: 123 VGVEELVLLVGRKVRGEAAVGVALAALVFAGGAGLGCGGLGGGGGGGGGG---------- 182
Query: 260 NLFRILWGGAVGVGGYGDIGCGCGS 269
R GG + +G GCG+
Sbjct: 183 ---RKAGGGVLAASCFGGSCMGCGA 194
BLAST of Sgr025296 vs. ExPASy TrEMBL
Match:
E5GCB2 (Chaperonin-60 kDa protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)
HSP 1 Score: 84.7 bits (208), Expect = 6.6e-13
Identity = 79/223 (35.43%), Postives = 120/223 (53.81%), Query Frame = 0
Query: 18 MIVSVELDDIKIINRSLLDMQRRRRRQRILHSPNINVFI-QTLPVIITPKLPHERLRLIL 77
M+ + +D +K++ +L+D R R RIL+SPN++ I QTL ++I P H+ I
Sbjct: 793 MVKAGIVDPLKVVRTALVDASRTR---RILNSPNLHFLIFQTLSILIFPN--HKPFPFIS 852
Query: 78 LKKLMLLLLLLHSAVPIQRIGIQKHDLGGNGVVALSRRRRSSSGGGGLLFTNGELVEDDV 137
KLML + +P Q G SS G GLL TN +L+E ++
Sbjct: 853 FHKLMLNPAISTHRIPFQNRGSSS----------------SSRGSSGLLLTNRQLMEHNL 912
Query: 138 ELGLAVVDLALEVADDAVAAADGVEGADVGLEDDGAHGLFLLIGVEILDDLELALAIVGE 197
+L L V +L L+++++ +A A+ + G+++ L+++ EL L IV E
Sbjct: 913 KLRLIVFNLTLKISNNPIATANRINGSNIRLKNN-----------------ELTLTIVRE 972
Query: 198 IRGENAVGGALSALVFAGGAGLGGGGGGG--GGGVGSWKMVVV 238
IR ENA+G AL++LVF GLGGGG GG GGG G ++VVV
Sbjct: 973 IRSENAIGSALTSLVFTSSTGLGGGGSGGCDGGGGGFGEVVVV 977
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
CAN78640.1 | 5.9e-16 | 45.03 | hypothetical protein VITISV_031739 [Vitis vinifera] | [more] |
PON48152.1 | 7.2e-14 | 47.80 | hypothetical protein PanWU01x14_239400 [Parasponia andersonii] | [more] |
RWW56882.1 | 9.4e-14 | 44.05 | hypothetical protein BHE74_00036373 [Ensete ventricosum] | [more] |
RRT76571.1 | 1.2e-13 | 39.51 | hypothetical protein B296_00016981 [Ensete ventricosum] | [more] |
RWV86912.1 | 1.2e-13 | 39.51 | hypothetical protein GW17_00051143, partial [Ensete ventricosum] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A5B4B4 | 2.9e-16 | 45.03 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_031739 PE=4 SV=1 | [more] |
A0A2P5BH77 | 3.5e-14 | 47.80 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_239400 PE... | [more] |
A0A427AK94 | 5.9e-14 | 39.51 | Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00016981 PE=4 SV=1 | [more] |
A0A444CM14 | 5.9e-14 | 39.51 | Uncharacterized protein (Fragment) OS=Ensete ventricosum OX=4639 GN=GW17_0005114... | [more] |
E5GCB2 | 6.6e-13 | 35.43 | Chaperonin-60 kDa protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |