Sgr024843 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr024843
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Dynein light chain
Location	tig00002486: 3364118 .. 3369987 (+)
RNA-Seq Expression	Sgr024843
Synteny	Sgr024843

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCAAGACGCCAAGAGAAGCAATCCCGGAGCTCTAATGGTGAAACCCGAATCTGAGGATCGGAAACCCTCGTCTGCGGCACAAGTCGGGAAGAAAGTCGTCATCAAGAGCGCCGATATGTTTGGGGACATGCAGAAGGAGGCTGTTGACATTGCCATAGCCGTTAGTGCTCTTTCTCTCTACAAAACTCTTTTCAATCTATCTGAAATTATTCGAGAAGTAATTGCTGGAGAATCTGTTTCGTTTGTTGTTGTTTAGGCATTTGAGAAGCATACCGTCGAGAAGGACGTCGCGGAGCTGATAAAGAAGGAGTTCGATAAGAGGCATGGCCCGACCTGGCATTGCATCGTCGGTCGTAATTTTGGTAGGTATTTCACTCTCGTTGTAAGTCTCTAGGTTCCTGCTTAATTTTCACATTCGTTCCGTCTGATGGACCGAATCTAAATAAATTTCTGTTACTCTAGTCTCTTGCAAAAGATTCTGTTACTTCAATCTATAGCTTTTTTTTTTCCTCCCACTGAAATGGGGATCTAGCTTTGAAATTTTTTTTTTCCGGCGAATAATTATACCGAGAGGGATCCTTTTTCGGGATTCGGACATCATTAGCTTGACTCTTCTTTCGGGCTCCAGCATTTTGCAGGAGCAAGATTTGTATGCATAGGCAGTTTTAGCCCAATAGTGTTAGTACATGAAATTACATATATTATTGCATCACCAGACAAGTGCCTCTATTGGAGAATTTTGACTCCATTTGGTCATCGTCCTACTCTATATTGAATTTGCTAGCTAATTCTCAGCTACAGCAATCGTGTCAGCCTAAATGAATAACACTGGATGGTTTGGCTGTGGTGACAACCGGGGGGTGGGGGCTCCCCCTCAAAGTTTGATGATGAGGCCAACTAACGTAGTGAGATGGGATTGTTTGGAACTATGCAAGTTGACTATTTAGGCTCAAATGTTCCATAGGGACAAAAACCAATTGGTTTGAAATACTTGTTTTGGGTTCGAACGTTTCCATTTTCAGTTGCCTTCATTTAAAAAAAAAAAAGAAAGGCTGAAGCAATGAGCAGAATTTGACTTAGTTTTGCTAGTCATAATTCAACCGAAGCATTAGCTCTTTTATTTTTATTTTGCAATGTGGTCAGGCACCTAGTTGATCATGGCACTCATAAACTAGCTGACTTCACTGTGATTTAGCAATTTTTGTTGAATGACTTAATCTGATATCTGTATGATTCTGTTTGCACAGTGAATGGTAAGAACCAAAATATCCTATTTCATATTAAATTCAAGCATCAAATGTTCAGTTATTGGTATTTATGGAAGGTAAAAATTGCTTGAAGAGATGCCGGGAGGTGATCTGCAACTTTTTTATTTCCCCCTTCGTGCTATTAGAGAAATAAATGATTCTTATTGGCAAAAACTAAAAGGTAGGGATCACACAGACAGAGAGCCTTGCCAATCTAAAACTTTCAAAGTAAACTCATTTTACTTTTACCATGCCATTCTGAGATTTAGAGCTGAAAGCTAAATGTTTAAAGCTTAAGTTAGTATGTAAATGTGTAGTGTGTGAACGAGTAATCATTTGATTGGCATGCTCCCGCTTGTGCTTTCCATTACCTTATAGTGCCAAAATTTTGCATTTATATGGCAATTCATCCCCCAAGCCTTAAGGAACCCAGTGGTAGTAGTGATCTGTTTAGTCTTTTCATTTTGGCTGAGTGGATTTAATGCATTCCTAGCTATAAAAATTACAAGCCCTTATAGTTCTTATGTTAGTAGATGAAAGGAACCTTTAGTTTTAGTTGCTGGCTCTGGCTTCAGAGTTCGGACTGATAATTTGGAAAATTTCAAAATATACTTTCCCTTGTCTGCAAGAATGTTGCAGTGCACTGTCTTGTTCATGATTATTGAGCTCTATTCAGGGTACTTTTTGTGTTATTTCTTTTTCCTGCCTTAAATTAATATCACGGATGATTCTATTTTCTGGTTTCTGTTTCAGGTTCCTATGTGACACACGAAACAAACCATTTTGTTTACTTCTACCTGGATCAGAAAGCAATTTTACTTTTCAAGTCTGGTTGATGATTGTTCTCCCCTTGACAAAGATGCTACCAACAAATTTGGCGAGTCTGCGATTATGATGCTACGACAACTTCTTGTATGTATAATCTAGTCTGCGAGCATGTAAATTATTTGGTTTAACATTTTTCGTATTATAACTAATAGATCACTCGGGAGTAGATTAAATGGTGAAACAAGAAATTAAATGTGCCATTTACATAATGCCTCAAAAGGGTTTCTTTATCAATCCCCTTCAGAAAATTAAAACAGAAGGTTGCAGGACCTGAAGCTTCAAAACAAAAAAAATGCTGTGCCATTGGCTGAATGGTCAATGTCGCTTGCCAATTCTGTCATTATGTCTTGAGAGATGAGCGAGTTTATGGTGGTTTTTAATGGGGTTTTGGTGGTTAAATTTTCAACTGCTGGCTCTGAAATATGCCTTGGAAGTTGATCAACTATAGAAGAGTAAATGCATCATTCTGAACACTACTGTAGTACAAGATAAGCTGTAGTAAAAGGGGGGTAGTGCAGACTGGAATTTTGAAACAAGAAGAATTTTTGTACGGTTGCTAAATCAAGGAGGAGTTGAAGCTCTCTTTCTCTCTCTCTGGTACTTGGGAAATGAGATTCTGCAGCATGTTCTTGTTGATTCATTAGTGTTGATTCCTTTTATTATTATATAATGTTTTGCTCTTATACAGCTTAGCAGGCCTACTTTGAAAACTTGCTTAGGCAGGGGAGGAACTGTAGGGCCTGTTTGGCTACTTTGTTTTTGAAAATTATGTTGAGTAGGTTGTCGTAATAAGATTATTGTGTAATTATTTAGACTGGTTTTAAAGTAAAAAACATATTCAGTTATTTTCAAAATGGTCGCAGGTGAGAATGAAGAGAAATTATAAACAAGTACTTTTAAAAAACATTTGGACAAATATTTTTTTCACTAATTTTTTTTTTCATTCTTAAAAATGTGAAATAGTCTGAAAAACAACTTTCAAATAGTTCCTTATATATATATATATATATATATATATTCAAACTTTGTATTATTTTAAAATATTTTTTCTTTTAAAAATTTCCTTTGTTACTCTTCCCATTGAATTGACTGCAAGAACCATTTGTAAGGTTCCAAACTGGCATTTTGAAGGACACGACTTCATCTCCAATAACATTTGTCTCTGTTGATTAAACTGTCCACTCACCCCATTCCTTCAACGAAAAACATCTCTTTCGCTAAAAACATTTGTCTTTTCAACCAGTAAAAATCGACCCCAAAATATCTTATCTGAGAAGAATGTTTTAGTACTGACAAATTATATGTTTTACGATAGTGGTTGAGAACTTAAGATATCTCTATTCTTAAAAAGTTGTAGGTTTGTCACTACTCCAAACTTTATGATAGGATCTATTAGACATAAAAAATTTATAGATTTATTAGATTTTTTTTTTAACATGTGGACCGATTAGATATAACTTTAAAAGCTTAGGAACCAAACTTGTAATTTAACATTTATCTTTTCTTCTCAAAAGTTATGGTTGAATATCTTGTAAATGCTTAAAGATTAAATTATATATTTTATTGGTGTATTTTGAATATTGTATCTATTTTGTCTTTAACTTTTAATACGATTTTAGATTTTGAATTATGTTTATTTTTAGTGTTTGTTATTACAACCGGTTGAAACGTGACACTTATTTATTGAAATTTGGATGAAGTATGATTTGGCAACCAATTGGATGAATTTGAAAGATTAGTGGACATGTAATTTTCTAATCAGGTTACTTGTCCCATCAATATCCTAAATCTAATTGTCTCGATTATCTATCCATTCATTTCTAATCCATCGAAATGGTTACCAAATTAGTCATGTCATCCAAAATTCAATGGAATATCATGTATGTGTTCAGTATATTGGTGTTTTAATAGTAGGGACTAAAGATAAACGCAATTCAAGTTTTGAGATGTAATTGATTTTTTTTTAAGTTAAAGGGACTAAATAGACACAAAATTCAAAATATTAAAACAAAATATATAATTTAACCTATATTTGACATTATTGCCTACCATAGAGAACTACTTTAATAATTAAAAAGAATAGGTAGAAAAATAAGAAAAAAAAAACTTTTTAAAAAATAATTATTCTAGCATATTCTTACTTTTACTCTCAAATACAAAACATTATGTTTGAAAATAGGTCACAAATAACACGTATTTCATGTCACTTTTTTTTTGGCAGTATATGATTTGGTTAAACCAAAATATTAATATATGTATTTTAACGTTACTTTAATTTTCCAATTCTAATATTTGGAATTTAATAATTGTATCAATTTTATCTTTGATGCTAAATATGTAATTAAATGACAATTTAAAGTTAACATAGACATGTAACGCATAATTAACATCAAAACTAAATTGATACATTTATAAAAATATAAAGATTTAAAAAATAAAGCTAAAGTAAATTAGCCTATTTTTCTTACCAGAGAAATTCTTCTCTTCAGTATCATGTTATTAAAATAACATAGTTTTGTTTTTTTTGCATGATTAAAATAATATAGTTGATAAATTAATTTTTAGGTGTAAAATATATTTCAAACTTCCTCTGAACTTTGTGCTATGAGGAGAGGGTAGTCTACTTTCATTCTAATTTTTCTTTTTACAAAATTCATTGTTTGGTAATCCAAATACTTCATAAAAAATTACCCCCCATTATAAATAACTTAAAAATCATCATTATTAATACCTATTCAAAACTTTTAATATCTCAAAAAAAAAATAATTTCTTTATTATCGATATCCAACCCTTTCATTTAATGAAAGTTATAAATAAGATAAAAATAAATTTGCATAGAAATTAAATCTTCAAACAATAATAAAATGTAGATTATAAAAGTACTAACATATGATCAGTACAACCGCTGCTTTAGGAGAAATTGTTAGAGTAGACTGAAACAATACAAGAAAACTGTTACAAAATATATTTCCAACCTATATCCAAAGATTATTAGGGACGTATAGATTTCGAATTTGTATCCAACTATTATTATTGAATAATTTTCGCTATTTTTTAGTAGACAATATAGATATTAATGTCAATCTAAACGTGCTCACCAATTATAATTTCTTTTATATAGGTCTTAAGTTCAACCTTTTTCGAACATTTGTAATGCTATATATTTTTTTTTAAAAAATAGATATTAACTTTCTTTTAACTCATTACTGATATGGTTGTCCTGTGTGGGATTTTGGGAAGCAAAAGAAATTTATTTTCCAAAAACAAACATGCCTTTGCCTTTCATAATTAAACATCAATGCTTAACCAAAAAAACAAAAATCCATCAATCTCTCTACCATCTGTCTCCATGTCTACGGAAGTTTTTTTTTGCTTATTACATCTTAAAAAACACATTTTCTTTTTTTCAGTTTCATATTCAGAAATCAAAACCCACCAAAAAAAAAAAAAAACATACACAGAAATCGATTCACAACCCGGAAAAAGAGAAGAGAGAGAGAGAGAGAAAAAAAAAAGAAAAAACACCATTCGTCTCAGTAGGCAAAACCTCCGGCGTGGTTTCTGCTGGCTTTACGGTGGCGAGAAGCCGGAGGTGACGTAGAAGACGAAGAAGAAGAAGAAGAAGAAGACGGCGGCGTTGCAGTGGTTTGTGGCTTCATGGCGGCCAAAGAGCAGTTTCCGTCGAGCATGCTTTGTTCTTCGTCCATGAAAATCTGCCGGCACCGGCACTCCACGCTGCAGAAACCCTTGTCTCCTCTGCAAAACCAGGACGCCAAAACTAAAATTTAA

mRNA sequence

ATGAGCCAAGACGCCAAGAGAAGCAATCCCGGAGCTCTAATGGTGAAACCCGAATCTGAGGATCGGAAACCCTCGTCTGCGGCACAAGTCGGGAAGAAAGTCGTCATCAAGAGCGCCGATATGTTTGGGGACATGCAGAAGGAGGCTGTTGACATTGCCATAGCCGTTAGTGCTCTTTCTCTCTACAAAACTCTTTTCAATCTATCTGAAATTATTCGAGAAGCATTTGAGAAGCATACCGTCGAGAAGGACGTCGCGGAGCTGATAAAGAAGGAGTTCGATAAGAGGCATGGCCCGACCTGGCATTGCATCGTCGGTCGTAATTTTGGTAGGTATTTCACTCTCGTTGCAAAACCTCCGGCGTGGTTTCTGCTGGCTTTACGGTGGCGAGAAGCCGGAGGTGACGTAGAAGACGAAGAAGAAGAAGAAGAAGAAGACGGCGGCGTTGCAGTGGTTTGTGGCTTCATGGCGGCCAAAGAGCAGTTTCCGTCGAGCATGCTTTGTTCTTCGTCCATGAAAATCTGCCGGCACCGGCACTCCACGCTGCAGAAACCCTTGTCTCCTCTGCAAAACCAGGACGCCAAAACTAAAATTTAA

Coding sequence (CDS)

ATGAGCCAAGACGCCAAGAGAAGCAATCCCGGAGCTCTAATGGTGAAACCCGAATCTGAGGATCGGAAACCCTCGTCTGCGGCACAAGTCGGGAAGAAAGTCGTCATCAAGAGCGCCGATATGTTTGGGGACATGCAGAAGGAGGCTGTTGACATTGCCATAGCCGTTAGTGCTCTTTCTCTCTACAAAACTCTTTTCAATCTATCTGAAATTATTCGAGAAGCATTTGAGAAGCATACCGTCGAGAAGGACGTCGCGGAGCTGATAAAGAAGGAGTTCGATAAGAGGCATGGCCCGACCTGGCATTGCATCGTCGGTCGTAATTTTGGTAGGTATTTCACTCTCGTTGCAAAACCTCCGGCGTGGTTTCTGCTGGCTTTACGGTGGCGAGAAGCCGGAGGTGACGTAGAAGACGAAGAAGAAGAAGAAGAAGAAGACGGCGGCGTTGCAGTGGTTTGTGGCTTCATGGCGGCCAAAGAGCAGTTTCCGTCGAGCATGCTTTGTTCTTCGTCCATGAAAATCTGCCGGCACCGGCACTCCACGCTGCAGAAACCCTTGTCTCCTCTGCAAAACCAGGACGCCAAAACTAAAATTTAA

Protein sequence

MSQDAKRSNPGALMVKPESEDRKPSSAAQVGKKVVIKSADMFGDMQKEAVDIAIAVSALSLYKTLFNLSEIIREAFEKHTVEKDVAELIKKEFDKRHGPTWHCIVGRNFGRYFTLVAKPPAWFLLALRWREAGGDVEDEEEEEEEDGGVAVVCGFMAAKEQFPSSMLCSSSMKICRHRHSTLQKPLSPLQNQDAKTKI

Homology

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BLAST of Sgr024843 vs. NCBI nr
Match: KAG6597532.1 (Dynein light chain 1, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 159.1 bits (401), Expect = 4.0e-35
Identity = 84/128 (65.62%), Postives = 93/128 (72.66%), Query Frame = 0


Query: 1   MSQDAKRSNPGALMVKPESEDRKPSSAAQVGKKVVIKSADMFGDMQKEAVDIAIAVSALS 60
           M+ D+KRSNP  LMVKPESEDRKPSSAA VGKK+VIKSADMFGDMQKEAVDIAIA     
Sbjct: 1   MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIA----- 60

Query: 61  LYKTLFNLSEIIREAFEKHTVEKDVAELIKKEFDKRHGPTWHCIVGRNFGRYF-TLVAKP 120
                         AFEKH+VEKDVAE IKKEFDKRHGPTWHC++GRNFG  F +L    
Sbjct: 61  --------------AFEKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSVFHSLCESL 109

Query: 121 PAWFLLAL 128
            +W +  L
Sbjct: 121 ASWLIFPL 109

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BLAST of Sgr024843 vs. NCBI nr
Match: XP_022945423.1 (dynein light chain 1, cytoplasmic-like [Cucurbita moschata])

HSP 1 Score: 158.3 bits (399), Expect = 6.8e-35
Identity = 82/114 (71.93%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 1   MSQDAKRSNPGALMVKPESEDRKPSSAAQVGKKVVIKSADMFGDMQKEAVDIAIAVSALS 60
           M+ D+KRSNP  LMVKPESEDRKPSSAA VGKK+VIKSADMFGDMQKEAVDIAIA     
Sbjct: 1   MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIA----- 60

Query: 61  LYKTLFNLSEIIREAFEKHTVEKDVAELIKKEFDKRHGPTWHCIVGRNFGRYFT 115
                         AFEKH+VEKDVAE IKKEFDKRHGPTWHC++GRNFG Y T
Sbjct: 61  --------------AFEKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSYVT 95

[Close]

BLAST of Sgr024843 vs. NCBI nr
Match: KAG7028990.1 (Dynein light chain 1, cytoplasmic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 155.6 bits (392), Expect = 4.4e-34
Identity = 81/113 (71.68%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 1   MSQDAKRSNPGALMVKPESEDRKPSSAAQVGKKVVIKSADMFGDMQKEAVDIAIAVSALS 60
           M+ D+KRSNP  LMVKPESEDRKPSSAA VGKK+VIKSADMFGDMQKEAVDIAIA     
Sbjct: 1   MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIA----- 60

Query: 61  LYKTLFNLSEIIREAFEKHTVEKDVAELIKKEFDKRHGPTWHCIVGRNFGRYF 114
                         AFEKH+VEKDVAE IKKEFDKRHGPTWHC++GRNFG  F
Sbjct: 61  --------------AFEKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSVF 94

[Close]

BLAST of Sgr024843 vs. NCBI nr
Match: XP_022973755.1 (dynein light chain 1, cytoplasmic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 154.5 bits (389), Expect = 9.9e-34
Identity = 82/114 (71.93%), Postives = 89/114 (78.07%), Query Frame = 0


Query: 1   MSQDAKRSNPGALMVKPESEDRKPSSAAQVGKKVVIKSADMFGDMQKEAVDIAIAVSALS 60
           M+ D+KRSNP +LMVKPESEDRKPSSAA VGKK+VIKSADMFGDMQKEAVDIAIA     
Sbjct: 1   MNHDSKRSNP-SLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIA----- 60

Query: 61  LYKTLFNLSEIIREAFEKHTVEKDVAELIKKEFDKRHGPTWHCIVGRNFGRYFT 115
                         AFEKH+VEKDVAE IKKEFDKRHGPTWHC++GRNFG Y T
Sbjct: 61  --------------AFEKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSYVT 94

[Close]

BLAST of Sgr024843 vs. NCBI nr
Match: XP_022138126.1 (dynein light chain 1, cytoplasmic [Momordica charantia])

HSP 1 Score: 151.8 bits (382), Expect = 6.4e-33
Identity = 80/114 (70.18%), Postives = 87/114 (76.32%), Query Frame = 0


Query: 1   MSQDAKRSNPGALMVKPESEDRKPSSAAQVGKKVVIKSADMFGDMQKEAVDIAIAVSALS 60
           M+QDAKR+NP +LMVKPESEDRKPSSA  + +KVVIKSADMFGDMQKEAVDIAIA     
Sbjct: 1   MNQDAKRTNPASLMVKPESEDRKPSSAPPLARKVVIKSADMFGDMQKEAVDIAIA----- 60

Query: 61  LYKTLFNLSEIIREAFEKHTVEKDVAELIKKEFDKRHGPTWHCIVGRNFGRYFT 115
                         AFEK+ VEKDVAE IK+EFDKRHGPTWHCIVGRNFG Y T
Sbjct: 61  --------------AFEKYAVEKDVAEQIKREFDKRHGPTWHCIVGRNFGSYVT 95

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BLAST of Sgr024843 vs. ExPASy Swiss-Prot
Match: Q22799 (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.5e-16
Identity = 45/96 (46.88%), Postives = 57/96 (59.38%), Query Frame = 0


Query: 30  VGKKVVIKSADMFGDMQKEAVDIAIAVSALSLYKTLFNLSEIIREAFEKHTVEKDVAELI 89
           V +K VIK+ADM  DMQ++A+D A                    +A EK+ +EKD+A  I
Sbjct: 2   VDRKAVIKNADMSDDMQQDAIDCA-------------------TQALEKYNIEKDIAAYI 61

Query: 90  KKEFDKRHGPTWHCIVGRNFGRYFTLVAKPPAWFLL 126
           KKEFDK++ PTWHCIVGRNFG Y T   K   +F L
Sbjct: 62  KKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYL 78

[Close]

BLAST of Sgr024843 vs. ExPASy Swiss-Prot
Match: Q3MHR3 (Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.6e-16
Identity = 45/94 (47.87%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 32  KKVVIKSADMFGDMQKEAVDIAIAVSALSLYKTLFNLSEIIREAFEKHTVEKDVAELIKK 91
           +K VIK+ADM  DMQ++AVD A                    +A EK+ +EKD+A  IKK
Sbjct: 4   RKAVIKNADMSEDMQQDAVDCA-------------------TQAMEKYNIEKDIAAYIKK 63

Query: 92  EFDKRHGPTWHCIVGRNFGRYFTLVAKPPAWFLL 126
           EFDK++ PTWHCIVGRNFG Y T   K   +F L
Sbjct: 64  EFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYL 78

[Close]

BLAST of Sgr024843 vs. ExPASy Swiss-Prot
Match: Q96FJ2 (Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.6e-16
Identity = 45/94 (47.87%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 32  KKVVIKSADMFGDMQKEAVDIAIAVSALSLYKTLFNLSEIIREAFEKHTVEKDVAELIKK 91
           +K VIK+ADM  DMQ++AVD A                    +A EK+ +EKD+A  IKK
Sbjct: 4   RKAVIKNADMSEDMQQDAVDCA-------------------TQAMEKYNIEKDIAAYIKK 63

Query: 92  EFDKRHGPTWHCIVGRNFGRYFTLVAKPPAWFLL 126
           EFDK++ PTWHCIVGRNFG Y T   K   +F L
Sbjct: 64  EFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYL 78

[Close]

BLAST of Sgr024843 vs. ExPASy Swiss-Prot
Match: Q9D0M5 (Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.6e-16
Identity = 45/94 (47.87%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 32  KKVVIKSADMFGDMQKEAVDIAIAVSALSLYKTLFNLSEIIREAFEKHTVEKDVAELIKK 91
           +K VIK+ADM  DMQ++AVD A                    +A EK+ +EKD+A  IKK
Sbjct: 4   RKAVIKNADMSEDMQQDAVDCA-------------------TQAMEKYNIEKDIAAYIKK 63

Query: 92  EFDKRHGPTWHCIVGRNFGRYFTLVAKPPAWFLL 126
           EFDK++ PTWHCIVGRNFG Y T   K   +F L
Sbjct: 64  EFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYL 78

[Close]

BLAST of Sgr024843 vs. ExPASy Swiss-Prot
Match: Q78P75 (Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.6e-16
Identity = 45/94 (47.87%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 32  KKVVIKSADMFGDMQKEAVDIAIAVSALSLYKTLFNLSEIIREAFEKHTVEKDVAELIKK 91
           +K VIK+ADM  DMQ++AVD A                    +A EK+ +EKD+A  IKK
Sbjct: 4   RKAVIKNADMSEDMQQDAVDCA-------------------TQAMEKYNIEKDIAAYIKK 63

Query: 92  EFDKRHGPTWHCIVGRNFGRYFTLVAKPPAWFLL 126
           EFDK++ PTWHCIVGRNFG Y T   K   +F L
Sbjct: 64  EFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYL 78

[Close]

BLAST of Sgr024843 vs. ExPASy TrEMBL
Match: A0A6J1G0U9 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111449637 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 3.3e-35
Identity = 82/114 (71.93%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 1   MSQDAKRSNPGALMVKPESEDRKPSSAAQVGKKVVIKSADMFGDMQKEAVDIAIAVSALS 60
           M+ D+KRSNP  LMVKPESEDRKPSSAA VGKK+VIKSADMFGDMQKEAVDIAIA     
Sbjct: 1   MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIA----- 60

Query: 61  LYKTLFNLSEIIREAFEKHTVEKDVAELIKKEFDKRHGPTWHCIVGRNFGRYFT 115
                         AFEKH+VEKDVAE IKKEFDKRHGPTWHC++GRNFG Y T
Sbjct: 61  --------------AFEKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSYVT 95

[Close]

BLAST of Sgr024843 vs. ExPASy TrEMBL
Match: A0A6J1IC60 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111472324 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 4.8e-34
Identity = 82/114 (71.93%), Postives = 89/114 (78.07%), Query Frame = 0


Query: 1   MSQDAKRSNPGALMVKPESEDRKPSSAAQVGKKVVIKSADMFGDMQKEAVDIAIAVSALS 60
           M+ D+KRSNP +LMVKPESEDRKPSSAA VGKK+VIKSADMFGDMQKEAVDIAIA     
Sbjct: 1   MNHDSKRSNP-SLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIA----- 60

Query: 61  LYKTLFNLSEIIREAFEKHTVEKDVAELIKKEFDKRHGPTWHCIVGRNFGRYFT 115
                         AFEKH+VEKDVAE IKKEFDKRHGPTWHC++GRNFG Y T
Sbjct: 61  --------------AFEKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSYVT 94

[Close]

BLAST of Sgr024843 vs. ExPASy TrEMBL
Match: A0A6J1C8U0 (Dynein light chain OS=Momordica charantia OX=3673 GN=LOC111009373 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 3.1e-33
Identity = 80/114 (70.18%), Postives = 87/114 (76.32%), Query Frame = 0


Query: 1   MSQDAKRSNPGALMVKPESEDRKPSSAAQVGKKVVIKSADMFGDMQKEAVDIAIAVSALS 60
           M+QDAKR+NP +LMVKPESEDRKPSSA  + +KVVIKSADMFGDMQKEAVDIAIA     
Sbjct: 1   MNQDAKRTNPASLMVKPESEDRKPSSAPPLARKVVIKSADMFGDMQKEAVDIAIA----- 60

Query: 61  LYKTLFNLSEIIREAFEKHTVEKDVAELIKKEFDKRHGPTWHCIVGRNFGRYFT 115
                         AFEK+ VEKDVAE IK+EFDKRHGPTWHCIVGRNFG Y T
Sbjct: 61  --------------AFEKYAVEKDVAEQIKREFDKRHGPTWHCIVGRNFGSYVT 95

[Close]

BLAST of Sgr024843 vs. ExPASy TrEMBL
Match: A0A6J1I9I2 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111472324 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 2.0e-32
Identity = 79/111 (71.17%), Postives = 87/111 (78.38%), Query Frame = 0


Query: 1   MSQDAKRSNPGALMVKPESEDRKPSSAAQVGKKVVIKSADMFGDMQKEAVDIAIAVSALS 60
           M+ D+KRSNP +LMVKPESEDRKPSSAA VGKK+VIKSADMFGDMQKEAVDIAIA     
Sbjct: 1   MNHDSKRSNP-SLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIA----- 60

Query: 61  LYKTLFNLSEIIREAFEKHTVEKDVAELIKKEFDKRHGPTWHCIVGRNFGR 112
                         AFEKH+VEKDVAE IKKEFDKRHGPTWHC++GRNF +
Sbjct: 61  --------------AFEKHSVEKDVAEQIKKEFDKRHGPTWHCVIGRNFAK 91

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BLAST of Sgr024843 vs. ExPASy TrEMBL
Match: A0A6J1IQ69 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111479508 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.4e-32
Identity = 80/125 (64.00%), Postives = 88/125 (70.40%), Query Frame = 0


Query: 1   MSQDAKRSNPGALMVKPESEDRKPSSAAQVGKKVVIKSADMFGDMQKEAVDIAIAVSALS 60
           M+Q++KRSNP  LMVKPESEDRK SS A   KK+VIKSADMFG MQKEAVDIAIA     
Sbjct: 29  MNQESKRSNPNPLMVKPESEDRKASSVAAAAKKIVIKSADMFGHMQKEAVDIAIA----- 88

Query: 61  LYKTLFNLSEIIREAFEKHTVEKDVAELIKKEFDKRHGPTWHCIVGRNFGRYFTLVAKPP 120
                         AFEKH+VEKDVAE IKKEFD+RHGPTWHCIVGRNFG Y T  +   
Sbjct: 89  --------------AFEKHSVEKDVAEQIKKEFDQRHGPTWHCIVGRNFGSYVTHESNHF 134

Query: 121 AWFLL 126
            +F L
Sbjct: 149 VYFYL 134

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BLAST of Sgr024843 vs. TAIR 10
Match: AT4G15930.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 96.7 bits (239), Expect = 2.3e-20
Identity = 56/114 (49.12%), Postives = 70/114 (61.40%), Query Frame = 0


Query: 6   KRSNPGALMVKPESEDRKPS-----SAAQVGKKVVIKSADMFGDMQKEAVDIAIAVSALS 65
           K+S  G    +   +DR+ S     ++   GK+ VIKSADM  DMQKEA++IAI+     
Sbjct: 7   KKSVNGGAPAQTILDDRRSSLPEVEASPPAGKRAVIKSADMKDDMQKEAIEIAIS----- 66

Query: 66  LYKTLFNLSEIIREAFEKHTVEKDVAELIKKEFDKRHGPTWHCIVGRNFGRYFT 115
                         AFEK++VEKD+AE IKKEFDK+HG TWHCIVGRNFG Y T
Sbjct: 67  --------------AFEKYSVEKDIAENIKKEFDKKHGATWHCIVGRNFGSYVT 101

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BLAST of Sgr024843 vs. TAIR 10
Match: AT1G23220.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 49.7 bits (117), Expect = 3.2e-06
Identity = 34/102 (33.33%), Postives = 49/102 (48.04%), Query Frame = 0


Query: 15  VKPESEDRKPSSAAQVGKKVVIKSADMFGDMQKEAVDIAIAVSALSL--YKTLFNLSEII 74
           V+ E E R     + + KK   +  D     QK+  ++ +  S + L      F+LS  I
Sbjct: 4   VELELERRSKFLNSLIQKKKAKEQQD-----QKDEFNVRVRASDMPLPQQNRAFSLSREI 63

Query: 75  REAFEKHTVEKDVAELIKKEFDKRHGPTWHCIVGRNFGRYFT 115
             A       K +A  +KK+FD  +GP WHCIVG +FG Y T
Sbjct: 64  LNATPGKADNKRLAHALKKDFDSAYGPAWHCIVGTSFGSYVT 100

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BLAST of Sgr024843 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 48.9 bits (115), Expect = 5.4e-06
Identity = 31/82 (37.80%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 33  KVVIKSADMFGDMQKEAVDIAIAVSALSLYKTLFNLSEIIREAFEKHTVEKDVAELIKKE 92
           K +++ +DM   MQ +A  +A A  AL L+           + F+     K +A  IKKE
Sbjct: 5   KAMVEDSDMPVKMQMQA--MAFASQALDLF-----------DVFDC----KSIAGHIKKE 64

Query: 93  FDKRHGPTWHCIVGRNFGRYFT 115
           FD+R+G  W C+VG NFG +FT
Sbjct: 65  FDERYGSGWQCVVGSNFGCFFT 69

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BLAST of Sgr024843 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 48.1 bits (113), Expect = 9.3e-06
Identity = 32/101 (31.68%), Postives = 52/101 (51.49%), Query Frame = 0


Query: 19  SEDRKPSSAAQVGKKVVIK-SADMFGDMQKEAVDIAIAVSALS----LYKTLFNLSEIIR 78
           +E +K   AA+ G+K V     D    ++  A  + + + A      +    F  + +  
Sbjct: 81  NERKKGGGAAEEGRKSVSHVERDTAARIEAAAEMLTVRILAADMPGFMQAHAFRCARMTL 140

Query: 79  EAFEKHTVEKDVAELIKKEFDKRHGPTWHCIVGRNFGRYFT 115
           ++ EK +  K +A  +KKEFDK +GP WHCIVG +FG + T
Sbjct: 141 DSLEKFS-SKHMAFNLKKEFDKGYGPAWHCIVGSSFGSFVT 180

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BLAST of Sgr024843 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.2e-05
Identity = 29/82 (35.37%), Postives = 42/82 (51.22%), Query Frame = 0


Query: 33  KVVIKSADMFGDMQKEAVDIAIAVSALSLYKTLFNLSEIIREAFEKHTVEKDVAELIKKE 92
           K  ++  DM   MQ +A  + IA  +L L+    ++S               +A  IKKE
Sbjct: 5   KAKVEETDMPVKMQMQA--MKIASQSLDLFDVFDSIS---------------IAAHIKKE 64

Query: 93  FDKRHGPTWHCIVGRNFGRYFT 115
           FD+R+G  W C+VG NFG +FT
Sbjct: 65  FDERYGSGWQCVVGTNFGCFFT 69

The following BLAST results are available for this feature:

BLAST of Sgr024843 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597532.1	4.0e-35	65.63	Dynein light chain 1, cytoplasmic, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022945423.1	6.8e-35	71.93	dynein light chain 1, cytoplasmic-like [Cucurbita moschata]	[more]
KAG7028990.1	4.4e-34	71.68	Dynein light chain 1, cytoplasmic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022973755.1	9.9e-34	71.93	dynein light chain 1, cytoplasmic-like isoform X1 [Cucurbita maxima]	[more]
XP_022138126.1	6.4e-33	70.18	dynein light chain 1, cytoplasmic [Momordica charantia]	[more]

BLAST of Sgr024843 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q22799	2.5e-16	46.88	Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=...	[more]
Q3MHR3	5.6e-16	47.87	Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1	[more]
Q96FJ2	5.6e-16	47.87	Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1	[more]
Q9D0M5	5.6e-16	47.87	Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1	[more]
Q78P75	5.6e-16	47.87	Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 S...	[more]

BLAST of Sgr024843 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G0U9	3.3e-35	71.93	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111449637 PE=3 SV=1	[more]
A0A6J1IC60	4.8e-34	71.93	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111472324 PE=3 SV=1	[more]
A0A6J1C8U0	3.1e-33	70.18	Dynein light chain OS=Momordica charantia OX=3673 GN=LOC111009373 PE=3 SV=1	[more]
A0A6J1I9I2	2.0e-32	71.17	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111472324 PE=3 SV=1	[more]
A0A6J1IQ69	3.4e-32	64.00	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111479508 PE=3 SV=1	[more]

BLAST of Sgr024843 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15930.1	2.3e-20	49.12	Dynein light chain type 1 family protein	[more]
AT1G23220.1	3.2e-06	33.33	Dynein light chain type 1 family protein	[more]
AT1G52240.2	5.4e-06	37.80	RHO guanyl-nucleotide exchange factor 11	[more]
AT5G20110.1	9.3e-06	31.68	Dynein light chain type 1 family protein	[more]
AT3G16120.1	1.2e-05	35.37	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 29..119 e-value: 2.5E-22 score: 90.2
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 33..115 e-value: 1.2E-20 score: 73.6
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 69..114
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 2..55
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 30..126 e-value: 5.6E-24 score: 86.2
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 32..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR11886:SF35	DYNEIN LIGHT CHAIN 2, CYTOPLASMIC	coord: 69..114
None	No IPR available	PANTHER	PTHR11886:SF35	DYNEIN LIGHT CHAIN 2, CYTOPLASMIC	coord: 2..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr024843.1	Sgr024843.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0030286	dynein complex
molecular_function	GO:0045505	dynein intermediate chain binding
molecular_function	GO:0051959	dynein light intermediate chain binding