Sgr024743 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr024743
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionUnknown protein
Locationtig00002486: 2398906 .. 2400054 (+)
RNA-Seq ExpressionSgr024743
SyntenySgr024743
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATGAACATCCACCAACGACTACCACATCGCTCAAATCTTCAATCTCTACTCTTGCGTCATGTAAGCACTGCTTTACGAGATTCTCACATTTCTCAAACACCTTGCTGTTCGCCAACTCAAACTCCTCCCGGTTTAGGACCTTGCATATTTTTGACCCATTTCCCAAGTTGACATCGATTTGAACACTAGTCTGGAATGAAAGCTTGTGGATAGCATCCTGGGTTGCAACTCGGAGCAATCCCATTTTTCTGATATCTTCAATTCCATGGTTTGAGAATATAGATTCAGAATTTGGCAAAAGATACTTCATGGTATTTTGAAGTAGATCTTCTCCTCCAGTAGGACTTCCAGCTAGGGCTCTGATCTGTGACACTCCTCCGGCTGTAGCTGATACAGCTACATCACAATACCCAGCTCCCATGTTGAAAATAAGGGCAACTTTTTCACTTCCATTGCCCATGTTCTCATGTACAGCCTGCTGCTGTTGTTGGGTATATAATAAAGCTACTGCTGTTGGTTCAGGCATCGATCTAACTTGAAGGCCAGCCATTGCACAAGCTCGTTCAACCCGAGTAAGCTGAAACCTGCTGAATGACACTGGAATTGTCAAAACAACATTTCTTATTGGCCGCTTTAGTTGATATTCAGCCATCATTTTCAATTCGACAAGAAAGATTGCCAGAACTTCTTCAGGAGTGGTAGATCTCCATACATTATTCACCAAAGCTGCAACAAATGGACGAACACCAATGTCCAAAGTTTGCACTAGAAAAGGAAGGCTCTTGCTTGCATGAACAACTGGGTCCGTGTCAACTCTTCCAATTAAGCGTTTCATATTGAAAATTGCAGCACCAGAGAGCATGTCATACTCATGGCTAAGCTCATTACTGACTCCTCCAGAAGGAGTGTCATCCTTGAAGGTGACATATGATCTCATAATTTTCTGATTTCTAGTGTTCTTAAGAAGCTCTACCCGAGAACCATTCCAGACTGCAATACTACATTGTGAAGTGCCAATATCAATTCCAACCGCAATCTCCGGAAAGGTTGATGTTGTTTTTTCCTCTCCAGTGGTTTCGCTATCAGAAGCTACAGTATATATTGGTTCAGCCATAATCTGCAATTTGATCCATATAAAGCTTTAG

mRNA sequence

ATGTATGAACATCCACCAACGACTACCACATCGCTCAAATCTTCAATCTCTACTCTTGCGTCATGTAAGCACTGCTTTACGAGATTCTCACATTTCTCAAACACCTTGCTGTTCGCCAACTCAAACTCCTCCCGATCTTCTCCTCCAGTAGGACTTCCAGCTAGGGCTCTGATCTGTGACACTCCTCCGGCTGTAGCTGATACAGCTACATCACAATACCCAGCTCCCATGCATCGATCTAACTTGAAGGCCAGCCATTGCACAAGCTCGTTCAACCCGATGTTCTTAAGAAGCTCTACCCGAGAACCATTCCAGACTGCAATACTACATTGTGAAGTGCCAATATCAATTCCAACCGCAATCTCCGGAAAGGTTGATGTTGTTTTTTCCTCTCCAGTGGTTTCGCTATCAGAAGCTACAGTATATATTGGTTCAGCCATAATCTGCAATTTGATCCATATAAAGCTTTAG

Coding sequence (CDS)

ATGTATGAACATCCACCAACGACTACCACATCGCTCAAATCTTCAATCTCTACTCTTGCGTCATGTAAGCACTGCTTTACGAGATTCTCACATTTCTCAAACACCTTGCTGTTCGCCAACTCAAACTCCTCCCGATCTTCTCCTCCAGTAGGACTTCCAGCTAGGGCTCTGATCTGTGACACTCCTCCGGCTGTAGCTGATACAGCTACATCACAATACCCAGCTCCCATGCATCGATCTAACTTGAAGGCCAGCCATTGCACAAGCTCGTTCAACCCGATGTTCTTAAGAAGCTCTACCCGAGAACCATTCCAGACTGCAATACTACATTGTGAAGTGCCAATATCAATTCCAACCGCAATCTCCGGAAAGGTTGATGTTGTTTTTTCCTCTCCAGTGGTTTCGCTATCAGAAGCTACAGTATATATTGGTTCAGCCATAATCTGCAATTTGATCCATATAAAGCTTTAG

Protein sequence

MYEHPPTTTTSLKSSISTLASCKHCFTRFSHFSNTLLFANSNSSRSSPPVGLPARALICDTPPAVADTATSQYPAPMHRSNLKASHCTSSFNPMFLRSSTREPFQTAILHCEVPISIPTAISGKVDVVFSSPVVSLSEATVYIGSAIICNLIHIKL
Homology
[Close]
BLAST of Sgr024743 vs. NCBI nr
Match: KAF7837284.1 (Heat shock 70 kDa protein 8 [Senna tora])

HSP 1 Score: 62.0 bits (149), Expect = 5.2e-06
Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 0 

Query: 97  RSSTREPFQTAILHCEVPISIPTAISGKVDVVFSSPVVSLSEATV 142
           RSST EPF TA LHC+VPISIP AISG V+   SSPVVSLS+AT+
Sbjct: 24  RSSTWEPFHTATLHCDVPISIPIAISGIVEDNLSSPVVSLSDATL 68

[Close]
BLAST of Sgr024743 vs. ExPASy TrEMBL
Match: A0A0A9JIZ7 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 7.4e-06
Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = 0 

Query: 94  MFLRSSTREPFQTAILHCEVPISIPTAISGKVDVVFSSPVVSLSEATVYIGSAII 149
           +F +SST  PFQTA LH EVP+S+P A SG      SSPVVSLS+ATVY  SAI+
Sbjct: 12  VFFKSSTSWPFQTATLHLEVPMSMPIATSGNDGCDLSSPVVSLSDATVYNCSAIL 66

[Close]
BLAST of Sgr024743 vs. ExPASy TrEMBL
Match: A0A0A9LYN3 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 6.3e-05
Identity = 31/48 (64.58%), Postives = 36/48 (75.00%), Query Frame = 0 

Query: 94  MFLRSSTREPFQTAILHCEVPISIPTAISGKVDVVFSSPVVSLSEATV 142
           +F +SST  PFQTA LH EVP+S+P A SG  D   SSPVVSLS+ATV
Sbjct: 12  VFFKSSTWWPFQTATLHLEVPMSMPIATSGNDDCDLSSPVVSLSDATV 59

The following BLAST results are available for this feature:
BLAST of Sgr024743 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF7837284.15.2e-0673.33Heat shock 70 kDa protein 8 [Senna tora][more]
BLAST of Sgr024743 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr024743 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A9JIZ77.4e-0661.82Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A0A9LYN36.3e-0564.58Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
BLAST of Sgr024743 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr024743.1Sgr024743.1mRNA