Sgr024639 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr024639
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	RING-type domain-containing protein
Location	tig00002486: 1450640 .. 1453178 (-)
RNA-Seq Expression	Sgr024639
Synteny	Sgr024639

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATGTCGCCATGTGACCGGCGTACCGACGGTGGTGATGCTGTTTTACCGTTCGTTCATTTCTGAAGCCACCGAGCCAATTGGGTCGGGTTGACGATCCAGATATGTGGGCCCCGTCTGTCTTCAGAATGTTCGCCACCTCGGAGTAGCTCTGATGCTCCTTCTTCATCTCCGACGACGGCTCGGCTTCCGTCTTCGTTTTCTTCCACTGGGCGGCAGATGGGCTTGCTACGGGAACGGCTTCGGCTGGAGCCGGGTCGAACTTCCGGCCCAATATGGTCCCTTTGGTCAGAAACTCAAAAGCCATGTACCGGCCAGCAGCCGGTTGGACGAAAGCGGCTGGCCGGCTTTCGGAGCCGATGGCTTCACGTCGTAATGAGCCGCCGACGGCTCCTTCCGCTTTCTGGACGGCCCAGCCGATAACAGCCCACGGCTGTGGAAACTCATCCTCTCGGCCCTTATGCACTGCCACGTAAGCTAGGCCCAACGAAGACTCAGATCCTCCGGTGGCAAAACCGTAGAAAGTAGATATTCCCAGGGGTAAAATCGTCCAACCAAGTTTTGTGATTTTTGTTGCCCTTTTTACAGAAACAATTTGGCCAAAGGGTAAAAAGGAAAAAGGCAAAAAAAAAAAAAAAGAGTGAGTGGGCAATGTAAAAATAAAGAAGAGGTTTAAAAATGGGATAACGTAAGTTAAGGCGAAAAGGGAAAAGGATTGAAAGGGACTGAATTTTTAAAAGAAAAAAAAAACAATATAATTTTTTTTAATTGGAAACGAAAACAGGGGAAAAAGGGGTCAATGTTTGGTAAAATCGGATCCAGATGGTGGCCGATGGAACCTGAGGACACTGGTCGGATCGGCGTACGGACGGCGGTTAACCAGTGGCGCCACCCGGCGAACGGCGGAGATGAGGAAAGATCGAGAAAACAGCGTTCAGATTGCAAAAAAATTGCAGAAGAAGGGAGAGACAGAGAGAAAAAGAGAGGAGAGAGAGAGAGTGGCAAGGGGAGAGAATGAGGCGAGGGTGAAGTCCCCGCTTTTATTTGGTGCACATTTCCAACTATACCCTTGTCCTACAGTAAAATACCTAAAATGCCCTTGGAAAATGTCTCCATCTCTATTTTGTCTTGATTCATGCTTCAGCGGTCCCTTATTTTTCATTTATCCATTTTTCATGTTTGGTTTTTCGGCTCAATAATTCGACCCAAAAATAAAATACATGCGACATTTTCTTCCATAAAAATTTTAATTTTTAATTTCTGAAAAATAAAAAAAAACATCTTCCCATTATTGATTTGATTTTCATGAGATTAATTAATAATTAAACAGAGTTCTTGCAACTTTTTTTTATTATATATCCAAAGATATATATTGGCACAAGTGCTAACATAAAATATTTTGGCTACCTTAGTGTTTTAAATTTGAAGACTTTCTCTATTTGACATTTCTATTGACATTTTCATATAATTTAATTATTGACTTTTTCTATATTAAATCTTGATATTTGATTCAACTATAGAGAGATGGATGAATTTAATTATTGAAGAAGATTACTACTAAAAATTGAAACTTTAAGTATGATGATTGTTTCATTTAAAAAAAAATTGTGGAATGATTGTTGTTTAGTTGTCAATCAAAAAGCTTAAGGGATCAATTTTTTAAAATTGGAAGATTTGTACCTTCGATCGATTGTTTTGTCATGCTTATTGATAAAATTGTTTGATAGAGAGATTATATAGGTTGATCTCATGTAGATTTGAGCTAGGAGTGCACATCGGTTCGGTTTTCTCGGTTTTGAGCCAAATCGAAAACCAAACCGATATGTTCGGTTTTTGTAAAAAAAGAATCAAACTGATGTCCAATTAAGCATAGAATCTCGGTTCGGTTCTTTTTAGTTCTGTTCTTCTCGATTTTGAGCGTTATTGGGCTTTTTCTCTTTTTGTGATTTTGGCCTGCTTATTCTCTGAGAGAGTCGAAAAGATGAGATCTAGGTTTTGGATGGAGACCAGAGCCCAATGATTCTGAAGCCGACGACGACGTGACGACCTTCCAAGGCTAGCTCCAACAGCTCTTCCACCTCCACGATGTCGGCGTCGACCAGTCCTTCATCGACACTCTCCCCGTCTTCTTCTACAAAGCCATCATCGGACTGAAACTTGACTCATTTGACTGCTCCGTCTGTCTCTGTGAATTCCACCCTCAAGATAAGCTTCGATTGTTGACCAAATGCAGCCATGCTTTTCACATGGACTGCATCGACACTTGGCTTTTGACCCACTCCAATTGCCCACTCTGTCGTGCTAGCTTGCTCTCTGATTTCTCTGCGATTAATGCCAGCTTCTCGTCCCCCATTGTTGCTGTGCTTGAATCTGCAAGCAACAGCTCCAGAGAAAATGGCCTGGAGAGGGAAATTTATGTCGGTTCCTTTCTGGGTTTTCTCGGGACTCTGAATTTGTTGAAGCTCCTCCAAAAGGAGACTAAGCTTCAGCAGCGGTCGTGGCGGCGGAGGGAGTCGAGAAGGTGGTGCCGATGGTGA

mRNA sequence

ATGGGATGTCGCCATGTGACCGGCGTACCGACGGTGGTGATGCTGTTTTACCGTTCGTTCATTTCTGAAGCCACCGAGCCAATTGGGTCGGATGGGCTTGCTACGGGAACGGCTTCGGCTGGAGCCGGGTCGAACTTCCGGCCCAATATGGTCCCTTTGGTCAGAAACTCAAAAGCCATGTACCGGCCAGCAGCCGGTTGGACGAAAGCGGCTGGCCGGCTTTCGGAGCCGATGGCTTCACGTCGTAATGAGCCGCCGACGGCTCCTTCCGCTTTCTGGACGGCCCAGCCGATAACAGCCCACGGCTGTGGAAACTCATCCTCTCGGCCCTTATGCACTGCCACGGGAAAAAGGGGTCAATGTTTGGTAAAATCGGATCCAGATGGTGGCCGATGGAACCTGAGGACACTGGTCGGATCGGCGTACGGACGGCGGTTAACCAGTGGCGCCACCCGGCGAACGGCGGAGATGAGGAAAGATCGAGAAAACAGCGTTCAGATTGCAAAAAAATTGCAGAAGAAGGGAGAGACAGAGAGAAAAAGAGAGGAGAGAGAGAGAGTGGCAAGGGGAGAGAATGAGGCGAGGCTCCAACAGCTCTTCCACCTCCACGATGTCGGCGTCGACCAGTCCTTCATCGACACTCTCCCCGTCTTCTTCTACAAAGCCATCATCGGACTGAAACTTGACTCATTTGACTGCTCCGTCTGTCTCTGTGAATTCCACCCTCAAGATAAGCTTCGATTGTTGACCAAATGCAGCCATGCTTTTCACATGGACTGCATCGACACTTGGCTTTTGACCCACTCCAATTGCCCACTCTGTCGTGCTAGCTTGCTCTCTGATTTCTCTGCGATTAATGCCAGCTTCTCGTCCCCCATTGTTGCTGTGCTTGAATCTGCAAGCAACAGCTCCAGAGAAAATGGCCTGGAGAGGGAAATTTATGTCGGTTCCTTTCTGGGTTTTCTCGGGACTCTGAATTTGTTGAAGCTCCTCCAAAAGGAGACTAAGCTTCAGCAGCGGTCGTGGCGGCGGAGGGAGTCGAGAAGGTGGTGCCGATGGTGA

Coding sequence (CDS)

ATGGGATGTCGCCATGTGACCGGCGTACCGACGGTGGTGATGCTGTTTTACCGTTCGTTCATTTCTGAAGCCACCGAGCCAATTGGGTCGGATGGGCTTGCTACGGGAACGGCTTCGGCTGGAGCCGGGTCGAACTTCCGGCCCAATATGGTCCCTTTGGTCAGAAACTCAAAAGCCATGTACCGGCCAGCAGCCGGTTGGACGAAAGCGGCTGGCCGGCTTTCGGAGCCGATGGCTTCACGTCGTAATGAGCCGCCGACGGCTCCTTCCGCTTTCTGGACGGCCCAGCCGATAACAGCCCACGGCTGTGGAAACTCATCCTCTCGGCCCTTATGCACTGCCACGGGAAAAAGGGGTCAATGTTTGGTAAAATCGGATCCAGATGGTGGCCGATGGAACCTGAGGACACTGGTCGGATCGGCGTACGGACGGCGGTTAACCAGTGGCGCCACCCGGCGAACGGCGGAGATGAGGAAAGATCGAGAAAACAGCGTTCAGATTGCAAAAAAATTGCAGAAGAAGGGAGAGACAGAGAGAAAAAGAGAGGAGAGAGAGAGAGTGGCAAGGGGAGAGAATGAGGCGAGGCTCCAACAGCTCTTCCACCTCCACGATGTCGGCGTCGACCAGTCCTTCATCGACACTCTCCCCGTCTTCTTCTACAAAGCCATCATCGGACTGAAACTTGACTCATTTGACTGCTCCGTCTGTCTCTGTGAATTCCACCCTCAAGATAAGCTTCGATTGTTGACCAAATGCAGCCATGCTTTTCACATGGACTGCATCGACACTTGGCTTTTGACCCACTCCAATTGCCCACTCTGTCGTGCTAGCTTGCTCTCTGATTTCTCTGCGATTAATGCCAGCTTCTCGTCCCCCATTGTTGCTGTGCTTGAATCTGCAAGCAACAGCTCCAGAGAAAATGGCCTGGAGAGGGAAATTTATGTCGGTTCCTTTCTGGGTTTTCTCGGGACTCTGAATTTGTTGAAGCTCCTCCAAAAGGAGACTAAGCTTCAGCAGCGGTCGTGGCGGCGGAGGGAGTCGAGAAGGTGGTGCCGATGGTGA

Protein sequence

MGCRHVTGVPTVVMLFYRSFISEATEPIGSDGLATGTASAGAGSNFRPNMVPLVRNSKAMYRPAAGWTKAAGRLSEPMASRRNEPPTAPSAFWTAQPITAHGCGNSSSRPLCTATGKRGQCLVKSDPDGGRWNLRTLVGSAYGRRLTSGATRRTAEMRKDRENSVQIAKKLQKKGETERKREERERVARGENEARLQQLFHLHDVGVDQSFIDTLPVFFYKAIIGLKLDSFDCSVCLCEFHPQDKLRLLTKCSHAFHMDCIDTWLLTHSNCPLCRASLLSDFSAINASFSSPIVAVLESASNSSRENGLEREIYVGSFLGFLGTLNLLKLLQKETKLQQRSWRRRESRRWCRW

Homology

[Close]

BLAST of Sgr024639 vs. NCBI nr
Match: XP_038890570.1 (RING-H2 finger protein ATL13-like [Benincasa hispida])

HSP 1 Score: 226.5 bits (576), Expect = 3.6e-55
Identity = 114/143 (79.72%), Postives = 122/143 (85.31%), Query Frame = 0


Query: 193 EARLQQLFHLHDVGVDQSFIDTLPVFFYKAIIGLKLDSFDCSVCLCEFHPQDKLRLLTKC 252
           + +L+QLFHLHD GVDQSFIDTLPVF YKAIIGLKLD FDCSVCLCEF P DKLRLLTKC
Sbjct: 83  QGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQPNDKLRLLTKC 142

Query: 253 SHAFHMDCIDTWLLTHSNCPLCRASLLSDFSAINASFSSPIVAVLESASNSSRENGLERE 312
           SHAFHMDCIDTWLLTHS CPLCRASL+SDF+AIN  FSSPIV VLESASNSSRE G   E
Sbjct: 143 SHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLESASNSSREIG---E 202

Query: 313 IYVGSFLGFLG-TLNLLKLLQKE 335
           I+ GSFLGFLG T N  +L  +E
Sbjct: 203 IHTGSFLGFLGDTSNFTELKTEE 222

[Close]

BLAST of Sgr024639 vs. NCBI nr
Match: KAA0048645.1 (RING-H2 finger protein ATL13 [Cucumis melo var. makuwa] >TYK10846.1 RING-H2 finger protein ATL13 [Cucumis melo var. makuwa])

HSP 1 Score: 225.3 bits (573), Expect = 8.1e-55
Identity = 111/142 (78.17%), Postives = 121/142 (85.21%), Query Frame = 0


Query: 193 EARLQQLFHLHDVGVDQSFIDTLPVFFYKAIIGLKLDSFDCSVCLCEFHPQDKLRLLTKC 252
           + +L+QLFHLHD GVDQSFIDTLPVF YKAIIGLKLD FDCSVCLCEF P DKLRLLTKC
Sbjct: 83  QGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQPNDKLRLLTKC 142

Query: 253 SHAFHMDCIDTWLLTHSNCPLCRASLLSDFSAINASFSSPIVAVLESASNSSRENGLERE 312
           SHAFHMDCIDTWLLTHS CPLCRASL+SDF+AIN  FSSPIV VLESASNSSRE G   E
Sbjct: 143 SHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLESASNSSREIG---E 202

Query: 313 IYVGSFLGFLGTLNLLKLLQKE 335
           ++ GSFLGFLG ++    L+ E
Sbjct: 203 VHTGSFLGFLGDVSDFTELKTE 221

[Close]

BLAST of Sgr024639 vs. NCBI nr
Match: XP_004149099.1 (RING-H2 finger protein ATL13 [Cucumis sativus] >KGN61088.1 hypothetical protein Csa_021137 [Cucumis sativus])

HSP 1 Score: 225.3 bits (573), Expect = 8.1e-55
Identity = 111/142 (78.17%), Postives = 121/142 (85.21%), Query Frame = 0


Query: 193 EARLQQLFHLHDVGVDQSFIDTLPVFFYKAIIGLKLDSFDCSVCLCEFHPQDKLRLLTKC 252
           + +L+QLFHLHD GVDQSFIDTLPVF YKAIIGLKLD FDCSVCLCEF P DKLRLLTKC
Sbjct: 83  QGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQPNDKLRLLTKC 142

Query: 253 SHAFHMDCIDTWLLTHSNCPLCRASLLSDFSAINASFSSPIVAVLESASNSSRENGLERE 312
           SHAFHMDCIDTWLLTHS CPLCRASL+SDF+AIN  FSSPIV VLESASNSSRE G   E
Sbjct: 143 SHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLESASNSSREIG---E 202

Query: 313 IYVGSFLGFLGTLNLLKLLQKE 335
           ++ GSFLGFLG ++    L+ E
Sbjct: 203 VHTGSFLGFLGDVSDFTELKTE 221

[Close]

BLAST of Sgr024639 vs. NCBI nr
Match: XP_008452317.1 (PREDICTED: RING-H2 finger protein ATL13 [Cucumis melo])

HSP 1 Score: 223.4 bits (568), Expect = 3.1e-54
Identity = 110/142 (77.46%), Postives = 121/142 (85.21%), Query Frame = 0


Query: 193 EARLQQLFHLHDVGVDQSFIDTLPVFFYKAIIGLKLDSFDCSVCLCEFHPQDKLRLLTKC 252
           + +L+QLFHLHD GVDQSFIDTLPVF YKAIIGLKLD FDCSVCLCEF P DKLRLLTKC
Sbjct: 83  QGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQPNDKLRLLTKC 142

Query: 253 SHAFHMDCIDTWLLTHSNCPLCRASLLSDFSAINASFSSPIVAVLESASNSSRENGLERE 312
           SHAFHMDCIDTWLLTHS CPLCRASL+SDF+AI+  FSSPIV VLESASNSSRE G   E
Sbjct: 143 SHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAISGGFSSPIVGVLESASNSSREIG---E 202

Query: 313 IYVGSFLGFLGTLNLLKLLQKE 335
           ++ GSFLGFLG ++    L+ E
Sbjct: 203 VHTGSFLGFLGDVSDFTELKTE 221

[Close]

BLAST of Sgr024639 vs. NCBI nr
Match: KAG7029789.1 (RING-H2 finger protein ATL13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 219.9 bits (559), Expect = 3.4e-53
Identity = 107/142 (75.35%), Postives = 120/142 (84.51%), Query Frame = 0


Query: 193 EARLQQLFHLHDVGVDQSFIDTLPVFFYKAIIGLKLDSFDCSVCLCEFHPQDKLRLLTKC 252
           + +L+QLF LHD GVDQSFIDTLPVF YKAIIGLK+D FDCSVCLCEF P DKLRLLTKC
Sbjct: 83  QGQLRQLFDLHDAGVDQSFIDTLPVFVYKAIIGLKVDPFDCSVCLCEFQPNDKLRLLTKC 142

Query: 253 SHAFHMDCIDTWLLTHSNCPLCRASLLSDFSAINASFSSPIVAVLESASNSSRENGLERE 312
           SHAFHMDCIDTWLLTHS CPLCRASL+SDF+AIN  F+SP+V VLESAS+SSRE G   E
Sbjct: 143 SHAFHMDCIDTWLLTHSTCPLCRASLISDFAAINGGFTSPLVEVLESASDSSREIG---E 202

Query: 313 IYVGSFLGFLGTLNLLKLLQKE 335
           ++ GSFLGFLG  N  +L  +E
Sbjct: 203 VHTGSFLGFLGNSNFAELKPEE 221

[Close]

BLAST of Sgr024639 vs. ExPASy Swiss-Prot
Match: Q940Q4 (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2)

HSP 1 Score: 169.1 bits (427), Expect = 9.0e-41
Identity = 87/121 (71.90%), Postives = 99/121 (81.82%), Query Frame = 0


Query: 193 EARLQQLFHLHDVGVDQSFIDTLPVFFYKAIIGLKLDSFDCSVCLCEFHPQDKLRLLTKC 252
           + +LQQLFHLHD GVDQSFIDTLPVF YK+IIGLK   FDC+VCLCEF  +DKLRLL KC
Sbjct: 94  QGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKC 153

Query: 253 SHAFHMDCIDTWLLTHSNCPLCRASLLSDFSAINASFSSPIVAVLESAS-NSSRENGLER 312
           SHAFHMDCIDTWLL+HS CPLCR+SLLSD S+     SS  + VLESAS +SSRE G +R
Sbjct: 154 SHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSS-FLLVLESASDHSSREIGGDR 213

[Close]

BLAST of Sgr024639 vs. ExPASy Swiss-Prot
Match: Q9ZV53 (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.1e-37
Identity = 74/111 (66.67%), Postives = 91/111 (81.98%), Query Frame = 0


Query: 193 EARLQQLFHLHDVGVDQSFIDTLPVFFYKAIIGLKLDSFDCSVCLCEFHPQDKLRLLTKC 252
           + +LQQLF+LHD GVDQS IDTLPVF YK+I+GLK+  FDC VCLCEF  +DKLRLL KC
Sbjct: 86  QGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKC 145

Query: 253 SHAFHMDCIDTWLLTHSNCPLCRASLLSDFSAINASFSSPIVAVLESASNS 304
           SHAFH++CIDTWLL+HS CPLCR++LLS FS+ + + SS  + VLES  +S
Sbjct: 146 SHAFHVECIDTWLLSHSTCPLCRSNLLSGFSS-HHNLSSSYLLVLESEQSS 195

[Close]

BLAST of Sgr024639 vs. ExPASy Swiss-Prot
Match: Q8GW38 (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 9.4e-30
Identity = 60/88 (68.18%), Postives = 70/88 (79.55%), Query Frame = 0


Query: 193 EARLQQLFHLHDVGVDQSFIDTLPVFFYKAIIGLKLDSFDCSVCLCEFHPQDKLRLLTKC 252
           + +LQQLFHLHD G+DQ+ ID LPVF YK I G K + FDC+VCLCEF   DKLRLL  C
Sbjct: 105 QRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTK-EPFDCAVCLCEFSEDDKLRLLPNC 164

Query: 253 SHAFHMDCIDTWLLTHSNCPLCRASLLS 281
           SHAFH+DCIDTWLL++S CPLCR +L S
Sbjct: 165 SHAFHIDCIDTWLLSNSTCPLCRGTLFS 191

[Close]

BLAST of Sgr024639 vs. ExPASy Swiss-Prot
Match: Q9FHG8 (Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana OX=3702 GN=ATL50 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.7e-28
Identity = 63/115 (54.78%), Postives = 82/115 (71.30%), Query Frame = 0


Query: 193 EARLQQLFHLHDVGVDQSFIDTLPVFFYKAIIGLKLDSFDCSVCLCEFHPQDKLRLLTKC 252
           + R Q  F+LHD  +DQSFID LP+  YK +IGL+ D  DC+VCL EF  +D+LRLL KC
Sbjct: 82  QGRYQTRFNLHDAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKC 141

Query: 253 SHAFHMDCIDTWLLTHSNCPLCRASLLSDFSAINASFSSPIVAVLESASNSSREN 308
           SHAFH++CIDTWLLT+S CPLCR +LL        + SS IV V ES  ++S+++
Sbjct: 142 SHAFHVECIDTWLLTNSTCPLCRDNLLL-LGLTGTASSSTIVLVHESDGDNSQDS 195

[Close]

BLAST of Sgr024639 vs. ExPASy Swiss-Prot
Match: Q9FL07 (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.3e-27
Identity = 61/107 (57.01%), Postives = 75/107 (70.09%), Query Frame = 0


Query: 193 EARLQQLFHLHDVGVDQSFIDTLPVFFYKAII---------GLKLDSFDCSVCLCEFHPQ 252
           + +LQQLFHL+D G+DQ+FID LPVF YK I+         G   + FDC+VCLCEF  +
Sbjct: 94  QRQLQQLFHLNDSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEK 153

Query: 253 DKLRLLTKCSHAFHMDCIDTWLLTHSNCPLCRASLLS-DFSAINASF 290
           DKLRLL  CSHAFH++CIDTWL ++S CPLCR +L S  FS  N  F
Sbjct: 154 DKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSPGFSMENPMF 200

[Close]

BLAST of Sgr024639 vs. ExPASy TrEMBL
Match: A0A5D3CK86 (RING-H2 finger protein ATL13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00150 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 3.9e-55
Identity = 111/142 (78.17%), Postives = 121/142 (85.21%), Query Frame = 0


Query: 193 EARLQQLFHLHDVGVDQSFIDTLPVFFYKAIIGLKLDSFDCSVCLCEFHPQDKLRLLTKC 252
           + +L+QLFHLHD GVDQSFIDTLPVF YKAIIGLKLD FDCSVCLCEF P DKLRLLTKC
Sbjct: 83  QGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQPNDKLRLLTKC 142

Query: 253 SHAFHMDCIDTWLLTHSNCPLCRASLLSDFSAINASFSSPIVAVLESASNSSRENGLERE 312
           SHAFHMDCIDTWLLTHS CPLCRASL+SDF+AIN  FSSPIV VLESASNSSRE G   E
Sbjct: 143 SHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLESASNSSREIG---E 202

Query: 313 IYVGSFLGFLGTLNLLKLLQKE 335
           ++ GSFLGFLG ++    L+ E
Sbjct: 203 VHTGSFLGFLGDVSDFTELKTE 221

[Close]

BLAST of Sgr024639 vs. ExPASy TrEMBL
Match: A0A0A0LH59 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G047810 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 3.9e-55
Identity = 111/142 (78.17%), Postives = 121/142 (85.21%), Query Frame = 0


Query: 193 EARLQQLFHLHDVGVDQSFIDTLPVFFYKAIIGLKLDSFDCSVCLCEFHPQDKLRLLTKC 252
           + +L+QLFHLHD GVDQSFIDTLPVF YKAIIGLKLD FDCSVCLCEF P DKLRLLTKC
Sbjct: 83  QGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQPNDKLRLLTKC 142

Query: 253 SHAFHMDCIDTWLLTHSNCPLCRASLLSDFSAINASFSSPIVAVLESASNSSRENGLERE 312
           SHAFHMDCIDTWLLTHS CPLCRASL+SDF+AIN  FSSPIV VLESASNSSRE G   E
Sbjct: 143 SHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGFSSPIVGVLESASNSSREIG---E 202

Query: 313 IYVGSFLGFLGTLNLLKLLQKE 335
           ++ GSFLGFLG ++    L+ E
Sbjct: 203 VHTGSFLGFLGDVSDFTELKTE 221

[Close]

BLAST of Sgr024639 vs. ExPASy TrEMBL
Match: A0A1S3BUP8 (RING-H2 finger protein ATL13 OS=Cucumis melo OX=3656 GN=LOC103493377 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.5e-54
Identity = 110/142 (77.46%), Postives = 121/142 (85.21%), Query Frame = 0


Query: 193 EARLQQLFHLHDVGVDQSFIDTLPVFFYKAIIGLKLDSFDCSVCLCEFHPQDKLRLLTKC 252
           + +L+QLFHLHD GVDQSFIDTLPVF YKAIIGLKLD FDCSVCLCEF P DKLRLLTKC
Sbjct: 83  QGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQPNDKLRLLTKC 142

Query: 253 SHAFHMDCIDTWLLTHSNCPLCRASLLSDFSAINASFSSPIVAVLESASNSSRENGLERE 312
           SHAFHMDCIDTWLLTHS CPLCRASL+SDF+AI+  FSSPIV VLESASNSSRE G   E
Sbjct: 143 SHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAISGGFSSPIVGVLESASNSSREIG---E 202

Query: 313 IYVGSFLGFLGTLNLLKLLQKE 335
           ++ GSFLGFLG ++    L+ E
Sbjct: 203 VHTGSFLGFLGDVSDFTELKTE 221

[Close]

BLAST of Sgr024639 vs. ExPASy TrEMBL
Match: A0A6J1K4Y8 (RING-H2 finger protein ATL13-like OS=Cucurbita maxima OX=3661 GN=LOC111492337 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 2.8e-53
Identity = 112/161 (69.57%), Postives = 128/161 (79.50%), Query Frame = 0


Query: 179 RKREERERVARGEN-----EARLQQLFHLHDVGVDQSFIDTLPVFFYKAIIGLKLDSFDC 238
           + R + E +A G+      + +L+QLF LHD GVDQSFIDTLPVF YKAIIGLKLD FDC
Sbjct: 64  QNRTDPEDIAVGDGDTSAFQGQLRQLFDLHDAGVDQSFIDTLPVFVYKAIIGLKLDPFDC 123

Query: 239 SVCLCEFHPQDKLRLLTKCSHAFHMDCIDTWLLTHSNCPLCRASLLSDFSAINASFSSPI 298
           SVCLCEF P DKLRLLTKCSHAFHMDCIDTWLLTHS CPLCRASL+SDF+AIN  F+SP+
Sbjct: 124 SVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLISDFAAINGGFTSPL 183

Query: 299 VAVLESASNSSRENGLEREIYVGSFLGFLGTLNLLKLLQKE 335
           V VLESASNSSRE G   +++ GSFLGFLG  N  +L  +E
Sbjct: 184 VEVLESASNSSREIG---DVHTGSFLGFLGNSNFAELKPEE 221

[Close]

BLAST of Sgr024639 vs. ExPASy TrEMBL
Match: A0A6J1ENY6 (RING-H2 finger protein ATL13-like OS=Cucurbita moschata OX=3662 GN=LOC111436220 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 2.8e-53
Identity = 112/161 (69.57%), Postives = 128/161 (79.50%), Query Frame = 0


Query: 179 RKREERERVARGEN-----EARLQQLFHLHDVGVDQSFIDTLPVFFYKAIIGLKLDSFDC 238
           + R + E +A G+      + +L+QLF LHD GVDQSFIDTLPVF YKAIIGLK+D FDC
Sbjct: 64  QNRTDPEDIAVGDGDTSAFQGQLRQLFDLHDAGVDQSFIDTLPVFVYKAIIGLKVDPFDC 123

Query: 239 SVCLCEFHPQDKLRLLTKCSHAFHMDCIDTWLLTHSNCPLCRASLLSDFSAINASFSSPI 298
           SVCLCEF P DKLRLLTKCSHAFHMDCIDTWLLTHS CPLCRASL+SDF+AIN  F+SP+
Sbjct: 124 SVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLISDFAAINGGFTSPL 183

Query: 299 VAVLESASNSSRENGLEREIYVGSFLGFLGTLNLLKLLQKE 335
           V VLESASNSSRE G   E++ GSFLGFLG  N  +L  +E
Sbjct: 184 VEVLESASNSSREIG---EVHTGSFLGFLGNSNFAELKPEE 221

[Close]

BLAST of Sgr024639 vs. TAIR 10
Match: AT4G30400.1 (RING/U-box superfamily protein )

HSP 1 Score: 169.1 bits (427), Expect = 6.4e-42
Identity = 87/121 (71.90%), Postives = 99/121 (81.82%), Query Frame = 0


Query: 193 EARLQQLFHLHDVGVDQSFIDTLPVFFYKAIIGLKLDSFDCSVCLCEFHPQDKLRLLTKC 252
           + +LQQLFHLHD GVDQSFIDTLPVF YK+IIGLK   FDC+VCLCEF  +DKLRLL KC
Sbjct: 94  QGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKC 153

Query: 253 SHAFHMDCIDTWLLTHSNCPLCRASLLSDFSAINASFSSPIVAVLESAS-NSSRENGLER 312
           SHAFHMDCIDTWLL+HS CPLCR+SLLSD S+     SS  + VLESAS +SSRE G +R
Sbjct: 154 SHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSS-FLLVLESASDHSSREIGGDR 213

[Close]

BLAST of Sgr024639 vs. TAIR 10
Match: AT2G18650.1 (RING/U-box superfamily protein )

HSP 1 Score: 156.4 bits (394), Expect = 4.3e-38
Identity = 74/111 (66.67%), Postives = 91/111 (81.98%), Query Frame = 0


Query: 193 EARLQQLFHLHDVGVDQSFIDTLPVFFYKAIIGLKLDSFDCSVCLCEFHPQDKLRLLTKC 252
           + +LQQLF+LHD GVDQS IDTLPVF YK+I+GLK+  FDC VCLCEF  +DKLRLL KC
Sbjct: 86  QGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKC 145

Query: 253 SHAFHMDCIDTWLLTHSNCPLCRASLLSDFSAINASFSSPIVAVLESASNS 304
           SHAFH++CIDTWLL+HS CPLCR++LLS FS+ + + SS  + VLES  +S
Sbjct: 146 SHAFHVECIDTWLLSHSTCPLCRSNLLSGFSS-HHNLSSSYLLVLESEQSS 195

[Close]

BLAST of Sgr024639 vs. TAIR 10
Match: AT1G23980.1 (RING/U-box superfamily protein )

HSP 1 Score: 132.5 bits (332), Expect = 6.7e-31
Identity = 60/88 (68.18%), Postives = 70/88 (79.55%), Query Frame = 0


Query: 193 EARLQQLFHLHDVGVDQSFIDTLPVFFYKAIIGLKLDSFDCSVCLCEFHPQDKLRLLTKC 252
           + +LQQLFHLHD G+DQ+ ID LPVF YK I G K + FDC+VCLCEF   DKLRLL  C
Sbjct: 105 QRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTK-EPFDCAVCLCEFSEDDKLRLLPNC 164

Query: 253 SHAFHMDCIDTWLLTHSNCPLCRASLLS 281
           SHAFH+DCIDTWLL++S CPLCR +L S
Sbjct: 165 SHAFHIDCIDTWLLSNSTCPLCRGTLFS 191

[Close]

BLAST of Sgr024639 vs. TAIR 10
Match: AT5G57750.1 (RING/U-box superfamily protein )

HSP 1 Score: 126.3 bits (316), Expect = 4.8e-29
Identity = 63/115 (54.78%), Postives = 82/115 (71.30%), Query Frame = 0


Query: 193 EARLQQLFHLHDVGVDQSFIDTLPVFFYKAIIGLKLDSFDCSVCLCEFHPQDKLRLLTKC 252
           + R Q  F+LHD  +DQSFID LP+  YK +IGL+ D  DC+VCL EF  +D+LRLL KC
Sbjct: 82  QGRYQTRFNLHDAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKC 141

Query: 253 SHAFHMDCIDTWLLTHSNCPLCRASLLSDFSAINASFSSPIVAVLESASNSSREN 308
           SHAFH++CIDTWLLT+S CPLCR +LL        + SS IV V ES  ++S+++
Sbjct: 142 SHAFHVECIDTWLLTNSTCPLCRDNLLL-LGLTGTASSSTIVLVHESDGDNSQDS 195

[Close]

BLAST of Sgr024639 vs. TAIR 10
Match: AT5G40250.1 (RING/U-box superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 2.4e-28
Identity = 61/107 (57.01%), Postives = 75/107 (70.09%), Query Frame = 0


Query: 193 EARLQQLFHLHDVGVDQSFIDTLPVFFYKAII---------GLKLDSFDCSVCLCEFHPQ 252
           + +LQQLFHL+D G+DQ+FID LPVF YK I+         G   + FDC+VCLCEF  +
Sbjct: 94  QRQLQQLFHLNDSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEK 153

Query: 253 DKLRLLTKCSHAFHMDCIDTWLLTHSNCPLCRASLLS-DFSAINASF 290
           DKLRLL  CSHAFH++CIDTWL ++S CPLCR +L S  FS  N  F
Sbjct: 154 DKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSPGFSMENPMF 200

The following BLAST results are available for this feature:

BLAST of Sgr024639 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890570.1	3.6e-55	79.72	RING-H2 finger protein ATL13-like [Benincasa hispida]	[more]
KAA0048645.1	8.1e-55	78.17	RING-H2 finger protein ATL13 [Cucumis melo var. makuwa] >TYK10846.1 RING-H2 fing...	[more]
XP_004149099.1	8.1e-55	78.17	RING-H2 finger protein ATL13 [Cucumis sativus] >KGN61088.1 hypothetical protein ...	[more]
XP_008452317.1	3.1e-54	77.46	PREDICTED: RING-H2 finger protein ATL13 [Cucumis melo]	[more]
KAG7029789.1	3.4e-53	75.35	RING-H2 finger protein ATL13, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]

BLAST of Sgr024639 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940Q4	9.0e-41	71.90	RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2	[more]
Q9ZV53	6.1e-37	66.67	Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 P...	[more]
Q8GW38	9.4e-30	68.18	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1	[more]
Q9FHG8	6.7e-28	54.78	Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana OX=3702 GN=ATL50 P...	[more]
Q9FL07	3.3e-27	57.01	RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1	[more]

BLAST of Sgr024639 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CK86	3.9e-55	78.17	RING-H2 finger protein ATL13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0LH59	3.9e-55	78.17	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G047810 P...	[more]
A0A1S3BUP8	1.5e-54	77.46	RING-H2 finger protein ATL13 OS=Cucumis melo OX=3656 GN=LOC103493377 PE=4 SV=1	[more]
A0A6J1K4Y8	2.8e-53	69.57	RING-H2 finger protein ATL13-like OS=Cucurbita maxima OX=3661 GN=LOC111492337 PE...	[more]
A0A6J1ENY6	2.8e-53	69.57	RING-H2 finger protein ATL13-like OS=Cucurbita moschata OX=3662 GN=LOC111436220 ...	[more]

BLAST of Sgr024639 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30400.1	6.4e-42	71.90	RING/U-box superfamily protein	[more]
AT2G18650.1	4.3e-38	66.67	RING/U-box superfamily protein	[more]
AT1G23980.1	6.7e-31	68.18	RING/U-box superfamily protein	[more]
AT5G57750.1	4.8e-29	54.78	RING/U-box superfamily protein	[more]
AT5G40250.1	2.4e-28	57.01	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 173..193
None	No IPR available	PANTHER	PTHR45768	E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE	coord: 190..311
None	No IPR available	PANTHER	PTHR45768:SF10	RING-H2 FINGER PROTEIN ATL13-RELATED	coord: 190..311
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 232..275 e-value: 2.57499E-17 score: 72.7197
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 227..282
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 233..274 e-value: 1.1E-4 score: 31.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 232..275 e-value: 7.4E-12 score: 45.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 233..275 score: 12.356501
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 192..280 e-value: 7.4E-20 score: 72.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr024639.1	Sgr024639.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0031625	ubiquitin protein ligase binding