Sgr024347 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr024347
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionMicrotubule-actin cross-linking factor 1
Locationtig00001291: 1935782 .. 1936202 (+)
RNA-Seq ExpressionSgr024347
SyntenySgr024347
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCGGCGCCCATAGCAAACAAGTTTGCCGGTTTCAAATCTTGATCCACGATCGGTCTGCCTCGAGGATTTGCTATATTTGCAGAGGTCATGATGGCGGATTTAATGGCTGCCGGTGACCATTCTGGATGAGAGCTCTTGATCAAAGCTGCAATGCCACTGAGATGAGGACATGACATCGATGTTCCCGAAATAACGTTGAATGTCGATCTTGTGGTGGTGTTGTTATCTAATGGGAACGGCCATGCTGCAAGAATGTTCACTCCGGGGCCAGTTATGTCGGGTTTCAAGATCCCAGGGCTGGAGAGGCTCGGACCTCGGGAAGAGAAAGAAGCCATGGCGAGAGAGGAAGAGCCATCTCCGATGATCGTTCCTTCGAATGAAATCGTTGCTGTTGGATTTCGTGATGAACTTATATAG

mRNA sequence

ATGTCCGGCGCCCATAGCAAACAAGTTTGCCGGTTTCAAATCTTGATCCACGATCGGTCTGCCTCGAGGATTTGCTATATTTGCAGAGGACATGACATCGATGTTCCCGAAATAACGTTGAATGTCGATCTTGTGGTGGTGTTGTTATCTAATGGGAACGGCCATGCTGCAAGAATGTTCACTCCGGGGCCAGTTATGTCGGGTTTCAAGATCCCAGGGCTGGAGAGGCTCGGACCTCGGGAAGAGAAAGAAGCCATGGCGAGAGAGGAAGAGCCATCTCCGATGATCGTTCCTTCGAATGAAATCGTTGCTGTTGGATTTCGTGATGAACTTATATAG

Coding sequence (CDS)

ATGTCCGGCGCCCATAGCAAACAAGTTTGCCGGTTTCAAATCTTGATCCACGATCGGTCTGCCTCGAGGATTTGCTATATTTGCAGAGGACATGACATCGATGTTCCCGAAATAACGTTGAATGTCGATCTTGTGGTGGTGTTGTTATCTAATGGGAACGGCCATGCTGCAAGAATGTTCACTCCGGGGCCAGTTATGTCGGGTTTCAAGATCCCAGGGCTGGAGAGGCTCGGACCTCGGGAAGAGAAAGAAGCCATGGCGAGAGAGGAAGAGCCATCTCCGATGATCGTTCCTTCGAATGAAATCGTTGCTGTTGGATTTCGTGATGAACTTATATAG

Protein sequence

MSGAHSKQVCRFQILIHDRSASRICYICRGHDIDVPEITLNVDLVVVLLSNGNGHAARMFTPGPVMSGFKIPGLERLGPREEKEAMAREEEPSPMIVPSNEIVAVGFRDELI
Homology
BLAST of Sgr024347 vs. NCBI nr
Match: KAF4369546.1 (hypothetical protein F8388_019415 [Cannabis sativa])

HSP 1 Score: 95.5 bits (236), Expect = 3.1e-16
Identity = 52/83 (62.65%), Postives = 56/83 (67.47%), Query Frame = 0

Query: 30  GHDIDVPEITLNVDLVVVLLSNGNGHAARMFTPGPVMSGFKIPGLERLGPREEKEAMARE 89
           GHDIDVP+I L  +   V LS  NG AARM TPGP+MSGFKIPGL RLGP +EKEA    
Sbjct: 32  GHDIDVPDIMLKAEFGFVSLSRRNGQAARMLTPGPMMSGFKIPGLARLGPLDEKEATTGA 91

Query: 90  EEPSPMIVPSNEIVAVGFRDELI 113
            E SPM VP N  VAVG   E I
Sbjct: 92  YE-SPMTVPLNNSVAVGVAVEFI 113

BLAST of Sgr024347 vs. NCBI nr
Match: KVI11593.1 (hypothetical protein Ccrd_009997 [Cynara cardunculus var. scolymus])

HSP 1 Score: 85.9 bits (211), Expect = 2.4e-13
Identity = 46/84 (54.76%), Postives = 59/84 (70.24%), Query Frame = 0

Query: 30  GHDIDVPEITLNV-DLVVVLLSNGNGHAARMFTPGPVMSGFKIPGLERLGPREEKEAMAR 89
           GHD++VP+I LN+ D V+VL ++G  HAARM TPGP+MSGF+IPGL   GPREE  A   
Sbjct: 100 GHDMEVPDIRLNIGDFVLVLPASGIAHAARMPTPGPIMSGFRIPGLTVFGPREE-NAATD 159

Query: 90  EEEPSPMIVPSNEIVAVGFRDELI 113
             + SP+ VP N   A+G R EL+
Sbjct: 160 GAKGSPITVPLNSNAAIGVRVELM 182

BLAST of Sgr024347 vs. NCBI nr
Match: RWR97941.1 (hypothetical protein CKAN_02741400 [Cinnamomum micranthum f. kanehirae])

HSP 1 Score: 77.8 bits (190), Expect = 6.6e-11
Identity = 41/83 (49.40%), Postives = 53/83 (63.86%), Query Frame = 0

Query: 30  GHDIDVPEITLNVDLVVVLLSNGNGHAARMFTPGPVMSGFKIPGLERLGPREEKEAMARE 89
           GHD+DVP+I L V+  +       GH AR  TPGP+MSGF+IPGL +LGPR+E +    +
Sbjct: 179 GHDMDVPDIMLKVEPKIGNDPTFRGHPARTLTPGPMMSGFRIPGLGKLGPRDENDITIGD 238

Query: 90  EEPSPMIVPSNEIVAVGFRDELI 113
            +  P IVP   I+AVG R E I
Sbjct: 239 GD-VPKIVPLKRIIAVGERVEFI 260

BLAST of Sgr024347 vs. NCBI nr
Match: RWR89323.1 (hypothetical protein CKAN_01837400 [Cinnamomum micranthum f. kanehirae])

HSP 1 Score: 77.8 bits (190), Expect = 6.6e-11
Identity = 41/83 (49.40%), Postives = 53/83 (63.86%), Query Frame = 0

Query: 30  GHDIDVPEITLNVDLVVVLLSNGNGHAARMFTPGPVMSGFKIPGLERLGPREEKEAMARE 89
           GHD+DVP+I L V+  +       GH AR  TPGP+MSGF+IPGL +LGPR+E +    +
Sbjct: 125 GHDMDVPDIMLKVEPKIGNDPTFRGHPARTLTPGPMMSGFRIPGLGKLGPRDENDITIGD 184

Query: 90  EEPSPMIVPSNEIVAVGFRDELI 113
            +  P IVP   I+AVG R E I
Sbjct: 185 GD-VPKIVPLKRIIAVGERVEFI 206

BLAST of Sgr024347 vs. NCBI nr
Match: OAY64554.1 (hypothetical protein ACMD2_14349 [Ananas comosus])

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-10
Identity = 45/86 (52.33%), Postives = 56/86 (65.12%), Query Frame = 0

Query: 30  GHDIDVPEITLNVDLVVVLLSNG---NGHAARMFTPGPVMSGFKIPGLERLGPREEKEAM 89
           G DI+VP+I L V + V  +S+G    GHAA  F PGP+MSGF++PGL RLGPREEK+  
Sbjct: 53  GVDIEVPDIILKV-MEVTFVSDGPTWKGHAATTFRPGPMMSGFRMPGLSRLGPREEKKVT 112

Query: 90  AREEEPSPMIVPSNEIVAVGFRDELI 113
               E  P +VP  EIVA G   EL+
Sbjct: 113 TGAGE-VPKLVPWKEIVASGLSVELM 136

BLAST of Sgr024347 vs. ExPASy TrEMBL
Match: A0A7J6FFR8 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_019415 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.5e-16
Identity = 52/83 (62.65%), Postives = 56/83 (67.47%), Query Frame = 0

Query: 30  GHDIDVPEITLNVDLVVVLLSNGNGHAARMFTPGPVMSGFKIPGLERLGPREEKEAMARE 89
           GHDIDVP+I L  +   V LS  NG AARM TPGP+MSGFKIPGL RLGP +EKEA    
Sbjct: 32  GHDIDVPDIMLKAEFGFVSLSRRNGQAARMLTPGPMMSGFKIPGLARLGPLDEKEATTGA 91

Query: 90  EEPSPMIVPSNEIVAVGFRDELI 113
            E SPM VP N  VAVG   E I
Sbjct: 92  YE-SPMTVPLNNSVAVGVAVEFI 113

BLAST of Sgr024347 vs. ExPASy TrEMBL
Match: A0A124SI51 (Uncharacterized protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_009997 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.2e-13
Identity = 46/84 (54.76%), Postives = 59/84 (70.24%), Query Frame = 0

Query: 30  GHDIDVPEITLNV-DLVVVLLSNGNGHAARMFTPGPVMSGFKIPGLERLGPREEKEAMAR 89
           GHD++VP+I LN+ D V+VL ++G  HAARM TPGP+MSGF+IPGL   GPREE  A   
Sbjct: 100 GHDMEVPDIRLNIGDFVLVLPASGIAHAARMPTPGPIMSGFRIPGLTVFGPREE-NAATD 159

Query: 90  EEEPSPMIVPSNEIVAVGFRDELI 113
             + SP+ VP N   A+G R EL+
Sbjct: 160 GAKGSPITVPLNSNAAIGVRVELM 182

BLAST of Sgr024347 vs. ExPASy TrEMBL
Match: A0A3S3N8N3 (Uncharacterized protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02741400 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.2e-11
Identity = 41/83 (49.40%), Postives = 53/83 (63.86%), Query Frame = 0

Query: 30  GHDIDVPEITLNVDLVVVLLSNGNGHAARMFTPGPVMSGFKIPGLERLGPREEKEAMARE 89
           GHD+DVP+I L V+  +       GH AR  TPGP+MSGF+IPGL +LGPR+E +    +
Sbjct: 179 GHDMDVPDIMLKVEPKIGNDPTFRGHPARTLTPGPMMSGFRIPGLGKLGPRDENDITIGD 238

Query: 90  EEPSPMIVPSNEIVAVGFRDELI 113
            +  P IVP   I+AVG R E I
Sbjct: 239 GD-VPKIVPLKRIIAVGERVEFI 260

BLAST of Sgr024347 vs. ExPASy TrEMBL
Match: A0A3S4PED1 (Uncharacterized protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01837400 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.2e-11
Identity = 41/83 (49.40%), Postives = 53/83 (63.86%), Query Frame = 0

Query: 30  GHDIDVPEITLNVDLVVVLLSNGNGHAARMFTPGPVMSGFKIPGLERLGPREEKEAMARE 89
           GHD+DVP+I L V+  +       GH AR  TPGP+MSGF+IPGL +LGPR+E +    +
Sbjct: 125 GHDMDVPDIMLKVEPKIGNDPTFRGHPARTLTPGPMMSGFRIPGLGKLGPRDENDITIGD 184

Query: 90  EEPSPMIVPSNEIVAVGFRDELI 113
            +  P IVP   I+AVG R E I
Sbjct: 185 GD-VPKIVPLKRIIAVGERVEFI 206

BLAST of Sgr024347 vs. ExPASy TrEMBL
Match: A0A199UIJ0 (Uncharacterized protein OS=Ananas comosus OX=4615 GN=ACMD2_14349 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 7.2e-11
Identity = 45/86 (52.33%), Postives = 56/86 (65.12%), Query Frame = 0

Query: 30  GHDIDVPEITLNVDLVVVLLSNG---NGHAARMFTPGPVMSGFKIPGLERLGPREEKEAM 89
           G DI+VP+I L V + V  +S+G    GHAA  F PGP+MSGF++PGL RLGPREEK+  
Sbjct: 53  GVDIEVPDIILKV-MEVTFVSDGPTWKGHAATTFRPGPMMSGFRMPGLSRLGPREEKKVT 112

Query: 90  AREEEPSPMIVPSNEIVAVGFRDELI 113
               E  P +VP  EIVA G   EL+
Sbjct: 113 TGAGE-VPKLVPWKEIVASGLSVELM 136

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAF4369546.13.1e-1662.65hypothetical protein F8388_019415 [Cannabis sativa][more]
KVI11593.12.4e-1354.76hypothetical protein Ccrd_009997 [Cynara cardunculus var. scolymus][more]
RWR97941.16.6e-1149.40hypothetical protein CKAN_02741400 [Cinnamomum micranthum f. kanehirae][more]
RWR89323.16.6e-1149.40hypothetical protein CKAN_01837400 [Cinnamomum micranthum f. kanehirae][more]
OAY64554.11.5e-1052.33hypothetical protein ACMD2_14349 [Ananas comosus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A7J6FFR81.5e-1662.65Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_019415 PE=4 SV=1[more]
A0A124SI511.2e-1354.76Uncharacterized protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_009... [more]
A0A3S3N8N33.2e-1149.40Uncharacterized protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_... [more]
A0A3S4PED13.2e-1149.40Uncharacterized protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_... [more]
A0A199UIJ07.2e-1152.33Uncharacterized protein OS=Ananas comosus OX=4615 GN=ACMD2_14349 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr024347.1Sgr024347.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane