Sgr024314 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr024314
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionUnknown protein
Locationtig00001291: 1673012 .. 1673452 (-)
RNA-Seq ExpressionSgr024314
SyntenySgr024314
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGCAATAATGGCCGAACGCAGAAGCCAACCTGCTTACTGATACAGAGTCGGGTCAGACAGCCTCGGCGTTGGGATGGCAACAAGAGGCGTCTTCTTCTTCAAAACAATCCCAAACTTCTCCTCAGTCTCCAGTTTCTCTCCTTCTTTCAACTTCCAGTCGAACGAATGCAAAAGCGTAGCAAGCAAATACATAAACATTCTTTCCGCCATGGCTATCCCTGCGCAGTTTCTTCTGCCGGACCCGAATGGAAAGTAACGGAAATCGCTCCCACCGAAATCCCACTTACTGTTCAAAAATCTCTCCGGGTCGAACTCCAGTGGCCTTTCCCACTGGTTCGGGTCTCGCTGAATCGCCCAGACGTTAATGAACACTCGAGAGCCCTTCGGAATTTCGTAATTCGAGACGATGGTGGTCTCGCTCGGGCAGTGCGGCACTAG

mRNA sequence

ATGCGCAATAATGGCCGAACGCAGAAGCCAACCTGCTTACTGATACAGAGTCGGGTCAGACAGCCTCGGCGTTGGGATGGCAACAAGAGGCGTCTTCTTCTTCAAAACAATCCCAAACTTCTCCTCAGTCTCCAGTTTCTCTCCTTCTTTCAACTTCCAGTCGAACGAATGCAAAAGCGTAGCAAGCAAATACATAAACATTCTTTCCGCCATGGCTATCCCTGCGCAGTTTCTTCTGCCGGACCCGAATGGAAAGTAACGGAAATCGCTCCCACCGAAATCCCACTTACTGTTCAAAAATCTCTCCGGGTCGAACTCCAGTGGCCTTTCCCACTGGTTCGGGTCTCGCTGAATCGCCCAGACGTTAATGAACACTCGAGAGCCCTTCGGAATTTCGTAATTCGAGACGATGGTGGTCTCGCTCGGGCAGTGCGGCACTAG

Coding sequence (CDS)

ATGCGCAATAATGGCCGAACGCAGAAGCCAACCTGCTTACTGATACAGAGTCGGGTCAGACAGCCTCGGCGTTGGGATGGCAACAAGAGGCGTCTTCTTCTTCAAAACAATCCCAAACTTCTCCTCAGTCTCCAGTTTCTCTCCTTCTTTCAACTTCCAGTCGAACGAATGCAAAAGCGTAGCAAGCAAATACATAAACATTCTTTCCGCCATGGCTATCCCTGCGCAGTTTCTTCTGCCGGACCCGAATGGAAAGTAACGGAAATCGCTCCCACCGAAATCCCACTTACTGTTCAAAAATCTCTCCGGGTCGAACTCCAGTGGCCTTTCCCACTGGTTCGGGTCTCGCTGAATCGCCCAGACGTTAATGAACACTCGAGAGCCCTTCGGAATTTCGTAATTCGAGACGATGGTGGTCTCGCTCGGGCAGTGCGGCACTAG

Protein sequence

MRNNGRTQKPTCLLIQSRVRQPRRWDGNKRRLLLQNNPKLLLSLQFLSFFQLPVERMQKRSKQIHKHSFRHGYPCAVSSAGPEWKVTEIAPTEIPLTVQKSLRVELQWPFPLVRVSLNRPDVNEHSRALRNFVIRDDGGLARAVRH
Homology
BLAST of Sgr024314 vs. NCBI nr
Match: KAE8683828.1 (putative calcium-binding protein CML13 [Hibiscus syriacus])

HSP 1 Score: 64.3 bits (155), Expect = 9.9e-07
Identity = 34/73 (46.58%), Postives = 44/73 (60.27%), Query Frame = 0

Query: 53  PVERMQKRSKQIHKHSFRHGYPCAVSSAGPEWKVTEIAPTEIPLTVQKSLRVELQWPFPL 112
           PV+RMQ+   +I  H   H      SS  PE K+T+I  T+IPL +QK   VELQW FP 
Sbjct: 150 PVKRMQQCGNRIQHHPLSHCNYSTDSSTRPERKITKITYTKIPLAIQKPAWVELQWIFPD 209

Query: 113 VRVSLNRPDVNEH 126
            RV +N P V++H
Sbjct: 210 GRVPVNCPGVDKH 222

BLAST of Sgr024314 vs. ExPASy TrEMBL
Match: A0A0E0IFG4 (Uncharacterized protein OS=Oryza nivara OX=4536 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.2e-11
Identity = 54/138 (39.13%), Postives = 77/138 (55.80%), Query Frame = 0

Query: 15  IQSRVRQPRRWDGNKRRLLLQNNPKLLLSLQFLSFFQLPVERMQKRSKQIHKHSFRHGYP 74
           ++ RV +PRR  G++RR LL ++ + L  +Q L+  QLPVER+ +  +++  H  RHG  
Sbjct: 34  VELRVGEPRRGHGDQRRGLLHHDAEPLGEVQPLAGRQLPVERLHQHRQRVGHHPLRHGDA 93

Query: 75  CAVSSAGPEWKVTEIAPTEI------PLTVQKSLRVELQWPFPLVRVSLNRPDVNEHSRA 134
            A    GPE  V  +AP E+       +  Q+ LR E+    P  RV L+RP V+EH  A
Sbjct: 94  RADPPPGPERHVLLLAPGEVQPPPSAAVRRQEPLRDEVFRVLPHRRVPLDRPHVDEHPGA 153

Query: 135 LRNFVIRDDGGLARAVRH 147
            R+ V    G LA AVRH
Sbjct: 154 RRDAVAAHRGVLAGAVRH 171

BLAST of Sgr024314 vs. ExPASy TrEMBL
Match: A0A6A2YWL8 (Putative calcium-binding protein CML13 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111166pilonHSYRG00113 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 4.8e-07
Identity = 34/73 (46.58%), Postives = 44/73 (60.27%), Query Frame = 0

Query: 53  PVERMQKRSKQIHKHSFRHGYPCAVSSAGPEWKVTEIAPTEIPLTVQKSLRVELQWPFPL 112
           PV+RMQ+   +I  H   H      SS  PE K+T+I  T+IPL +QK   VELQW FP 
Sbjct: 150 PVKRMQQCGNRIQHHPLSHCNYSTDSSTRPERKITKITYTKIPLAIQKPAWVELQWIFPD 209

Query: 113 VRVSLNRPDVNEH 126
            RV +N P V++H
Sbjct: 210 GRVPVNCPGVDKH 222

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8683828.19.9e-0746.58putative calcium-binding protein CML13 [Hibiscus syriacus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0E0IFG43.2e-1139.13Uncharacterized protein OS=Oryza nivara OX=4536 PE=4 SV=1[more]
A0A6A2YWL84.8e-0746.58Putative calcium-binding protein CML13 OS=Hibiscus syriacus OX=106335 GN=F3Y22_t... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr024314.1Sgr024314.1mRNA