Sgr024190 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr024190
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	photosynthetic NDH subunit of lumenal location 1, chloroplastic
Location	tig00001047: 3971421 .. 3973592 (+)
RNA-Seq Expression	Sgr024190
Synteny	Sgr024190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTTTCAACCTCATGCTTGAGTTGGGTTCCGACCACCGCATCAAATTGGAAGGTTGGTGTATTGATATACTGATCTTACAGGACCCAATTCTTTTGTCTCATTGTGCTTTGATTCCCAGCTGAGGTTGCTTCCTTTCAATGAGCTATCACCAGCTACTTGTTCATTTTCTTCGTGTAGTACCATCATTTGCTCCACCGAGAGAACTTCCCGTGAGGAAAGTAAGACTTGCATTCCCGAGTTCTATAGTCAATTCCAATGCTTAGAGTTGGTTTGTGATGCAGATTACTTTTATTGTGCCACCTTCAAACATTTGCATCTTCACGATGAGTGCCATGCCAATTTTAAAAGGATGTGGTTTTTCCTTTTTGATTTCGTTACTTGTGCGATGAAAATGCTTGTTTGGTACATAATCTGATTGCTTATTCTTGGAATTTGTTCAAATTTAGAGGTCCGTGCAGAATTATATTGTAGCTTGCATGCAAGGTGTTTGTACAAATGTCTGAATCAACTGGATTAATTCGGAAGAAGACTGTCCCCAGAAATTTTGTTTAGATTATTTGCCTTTTAGCGGTTCTCCTGAGATTGCATTTCCATTGTCTTTATTCGATCATTATCTCTTCTTTTCTTGGTTGAACATCAACTTAGTGAGTAGTGGTAATGGTTTCAAGCAAAACGATGACTTCACTTCTATCGTCTTTATACTGGGATTAATCACTGAATGAGGATTTTGATTAAGTTCCTCTTGATATTTTTCTTTTCTTTCCTTTGAGGTGTTTTTTTTTTCTCTGTTTTCTTGAACCTGGATATCCTTATTGACTGTGGTAATATGATGTTGATATTAACATTTAGGCCATTGCTATAGAAGGACGCTTCTGTTGGGAGTTGGAGCACTGGCTACAAGTTTACTCCCTGCAAGTTCCCTCTTTGCTGAAGGTACTGTGTTTGTCTCTAAAATTCTCTTCTCTCCAATAATTTAATGTTGCATTCCAAATTAATATTGTGATTTGTATGTGCAGAAGTCCCGAAAAATTATCGAGCTTTTGTAGACTCTACTGATGGGTATTCCTATTATTACCCCTCTGACTGGAGGGTAAGAAAATTTCAATAAGTAGAAACATGCATATATCTGTAGGAAACAAAAGAACATACTAAAACAAACAATTTCTACATGTTCCCTGTCTAGGAATTTGATTTTAGAGCCCATGATTCGGCATTCAAGGATCGATACCTGCAACTACAGAATGTTAGAGTAAAGTTCATACCAACTGAAAAAAAGGATATCCATGAAGAAGGTCCATTAGAAGAGGTAAAGCAATCTTCAATTTAGATCATATTTGATATTCTGAAAAGAAGTCTGAATAATTTAACTTGAATTGAGCAGGTTGTTAACTTTTTGGTAAAACATCGATATGCTGCACCAAATCAAAAAGCTACCATATATGACATGAAGGAGGTTTGCAACTTTCTCAGCCTCTCCAAATCAATTTTTATATATAATATTATTTTGAGGTCTGCTTCTGGACATCTGCTTGATCTTTTATTTACCTGTTTCAGCGAACGATTGATGGGAAAAATTATTATACCTTTGAGTATAAACTTAGTTCTAGTGCATACTCCCGCACCTCCTTTGCAACCATAGCTATTGCAAATGGTAAGCATGAATTTTATACCATTTGAATTTCAGGATCCTTCCTTTTTTTGATTTATCAGCTCTAACTCCCAAATTTCTTGATCATAGGATAATTTTTCTTACCCAAAAGAATAATGAAGAAAACCAAACCGAACCATTCAATTTAGAAAGAGAAAAATATTTGAAAAACATTTTCAAACCAATGGAATCGAACTTAACCAAATTCATTTAAAAGTTGTATTCTGCTATCTTAAAACAATTTATGTCTAATCTATATTTTCTGGAATCATTACAGTTCGTTTCAAGTTAAAGTTCCCGAATTCGAGCTGAACTAAGCCTACGTGCACCCCTTAAGCTTGTATATATAGATGAATTAATGCAAGAACAGGATAACTTGAAAGTGCTAAAACAGCCATTTCCTCTAATATGCAGGTAGATACTATACCTTGGTAGTTGGGGCAAATGACAGAAGGTGGAGAAGGTATCGTAACCTGCTTAAAGTGGTTGCCGACTCATTCAGGGTGCTGGATATCTGA

mRNA sequence

ATGGCAGTTTCAACCTCATGCTTGAGTTGGGTTCCGACCACCGCATCAAATTGGAAGCTGAGGTTGCTTCCTTTCAATGAGCTATCACCAGCTACTTGTTCATTTTCTTCGTGTAGTACCATCATTTGCTCCACCGAGAGAACTTCCCGTGAGGAAAGCCATTGCTATAGAAGGACGCTTCTGTTGGGAGTTGGAGCACTGGCTACAAGTTTACTCCCTGCAAGTTCCCTCTTTGCTGAAGAAGTCCCGAAAAATTATCGAGCTTTTGTAGACTCTACTGATGGGTATTCCTATTATTACCCCTCTGACTGGAGGGAATTTGATTTTAGAGCCCATGATTCGGCATTCAAGGATCGATACCTGCAACTACAGAATGTTAGAGTAAAGTTCATACCAACTGAAAAAAAGGATATCCATGAAGAAGGTCCATTAGAAGAGGTTGTTAACTTTTTGGTAAAACATCGATATGCTGCACCAAATCAAAAAGCTACCATATATGACATGAAGGAGCGAACGATTGATGGGAAAAATTATTATACCTTTGAGTATAAACTTAGTTCTAGTGCATACTCCCGCACCTCCTTTGCAACCATAGCTATTGCAAATGGTAGATACTATACCTTGGTAGTTGGGGCAAATGACAGAAGGTGGAGAAGGTATCGTAACCTGCTTAAAGTGGTTGCCGACTCATTCAGGGTGCTGGATATCTGA

Coding sequence (CDS)

ATGGCAGTTTCAACCTCATGCTTGAGTTGGGTTCCGACCACCGCATCAAATTGGAAGCTGAGGTTGCTTCCTTTCAATGAGCTATCACCAGCTACTTGTTCATTTTCTTCGTGTAGTACCATCATTTGCTCCACCGAGAGAACTTCCCGTGAGGAAAGCCATTGCTATAGAAGGACGCTTCTGTTGGGAGTTGGAGCACTGGCTACAAGTTTACTCCCTGCAAGTTCCCTCTTTGCTGAAGAAGTCCCGAAAAATTATCGAGCTTTTGTAGACTCTACTGATGGGTATTCCTATTATTACCCCTCTGACTGGAGGGAATTTGATTTTAGAGCCCATGATTCGGCATTCAAGGATCGATACCTGCAACTACAGAATGTTAGAGTAAAGTTCATACCAACTGAAAAAAAGGATATCCATGAAGAAGGTCCATTAGAAGAGGTTGTTAACTTTTTGGTAAAACATCGATATGCTGCACCAAATCAAAAAGCTACCATATATGACATGAAGGAGCGAACGATTGATGGGAAAAATTATTATACCTTTGAGTATAAACTTAGTTCTAGTGCATACTCCCGCACCTCCTTTGCAACCATAGCTATTGCAAATGGTAGATACTATACCTTGGTAGTTGGGGCAAATGACAGAAGGTGGAGAAGGTATCGTAACCTGCTTAAAGTGGTTGCCGACTCATTCAGGGTGCTGGATATCTGA

Protein sequence

MAVSTSCLSWVPTTASNWKLRLLPFNELSPATCSFSSCSTIICSTERTSREESHCYRRTLLLGVGALATSLLPASSLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLEEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYTFEYKLSSSAYSRTSFATIAIANGRYYTLVVGANDRRWRRYRNLLKVVADSFRVLDI

Homology

[Close]

BLAST of Sgr024190 vs. NCBI nr
Match: XP_022133531.1 (photosynthetic NDH subunit of lumenal location 1, chloroplastic [Momordica charantia])

HSP 1 Score: 443.7 bits (1140), Expect = 9.7e-121
Identity = 222/237 (93.67%), Postives = 228/237 (96.20%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLRLLPFNE-LSPATCSFSSCSTIICSTERTSREESHCYRRT 60
           MAVSTSCLSWVPTTASN K RLLPFN+ LSPA+CSFSSCSTIICSTERTS EESHCYRR 
Sbjct: 1   MAVSTSCLSWVPTTASNLKPRLLPFNDLLSPASCSFSSCSTIICSTERTSPEESHCYRRP 60

Query: 61  LLLGVGALATSLLPASSLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDR 120
           LLLGVGALATSLLPASSLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDR
Sbjct: 61  LLLGVGALATSLLPASSLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDR 120

Query: 121 YLQLQNVRVKFIPTEKKDIHEEGPLEEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYY 180
           YLQLQNVRVKFIPTEK+DIHEEGP+EEVVNFLV HRYAAPNQ+ATIYDMKERTIDGK YY
Sbjct: 121 YLQLQNVRVKFIPTEKRDIHEEGPIEEVVNFLVNHRYAAPNQQATIYDMKERTIDGKIYY 180

Query: 181 TFEYKLSSSAYSRTSFATIAIANGRYYTLVVGANDRRWRRYRNLLKVVADSFRVLDI 237
           TFEYKLSS AYSRTSFATIAI NGRYYTLVVGANDRRWRRYRN+LKVVADSFRVLDI
Sbjct: 181 TFEYKLSSRAYSRTSFATIAIGNGRYYTLVVGANDRRWRRYRNMLKVVADSFRVLDI 237

[Close]

BLAST of Sgr024190 vs. NCBI nr
Match: XP_022953447.1 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucurbita moschata] >KAG6602355.1 Photosynthetic NDH subunit of lumenal location 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033035.1 Photosynthetic NDH subunit of lumenal location 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 438.0 bits (1125), Expect = 5.3e-119
Identity = 216/236 (91.53%), Postives = 224/236 (94.92%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLRLLPFNELSPATCSFSSCSTIICSTERTSREESHCYRRTL 60
           MAVSTSCLSWVPT+ASNWK RLLPFNE S ATCS+SSC+TIICSTERTSR ESHC RR L
Sbjct: 1   MAVSTSCLSWVPTSASNWKPRLLPFNEPSTATCSYSSCTTIICSTERTSRVESHCNRRPL 60

Query: 61  LLGVGALATSLLPASSLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALA SL  AS LFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALAASLFAASPLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLEEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEG L+EVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGSLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT 180

Query: 181 FEYKLSSSAYSRTSFATIAIANGRYYTLVVGANDRRWRRYRNLLKVVADSFRVLDI 237
           FEYKLSS AYSRTSFATIA+ANGRYYTL+VGANDRRWRRYR++LKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAYSRTSFATIAVANGRYYTLIVGANDRRWRRYRDMLKVVADSFRVLDI 236

[Close]

BLAST of Sgr024190 vs. NCBI nr
Match: XP_038889544.1 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 438.0 bits (1125), Expect = 5.3e-119
Identity = 218/236 (92.37%), Postives = 224/236 (94.92%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLRLLPFNELSPATCSFSSCSTIICSTERTSREESHCYRRTL 60
           MAVSTSC SWVPTTASNWKLRLLPFNE S AT SFSSCSTI CSTE+TSREE HC RR L
Sbjct: 1   MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATSSFSSCSTINCSTEKTSREEGHCNRRPL 60

Query: 61  LLGVGALATSLLPASSLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALATSLL AS LFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALATSLLAASPLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLEEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEG L+EVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGSLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYT 180

Query: 181 FEYKLSSSAYSRTSFATIAIANGRYYTLVVGANDRRWRRYRNLLKVVADSFRVLDI 237
           FEYKLSS A+SRTSFATIAIANGRYYTLVVGANDRRWRRYR++LKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236

[Close]

BLAST of Sgr024190 vs. NCBI nr
Match: XP_023534746.1 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435.3 bits (1118), Expect = 3.5e-118
Identity = 214/236 (90.68%), Postives = 224/236 (94.92%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLRLLPFNELSPATCSFSSCSTIICSTERTSREESHCYRRTL 60
           MAVSTSCLSWVPT+ASNWK RLLPFNE S ATCS+SSC+T+ICSTERTSR ES C RR L
Sbjct: 1   MAVSTSCLSWVPTSASNWKPRLLPFNEPSTATCSYSSCTTVICSTERTSRVESQCNRRPL 60

Query: 61  LLGVGALATSLLPASSLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALATSL  A+ LFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALATSLFAATPLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLEEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEG L+EVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGSLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT 180

Query: 181 FEYKLSSSAYSRTSFATIAIANGRYYTLVVGANDRRWRRYRNLLKVVADSFRVLDI 237
           FEYKLSS AYSRTSFATIA+ANGRYYTL+VGANDRRWRRYR++LKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAYSRTSFATIAVANGRYYTLIVGANDRRWRRYRDMLKVVADSFRVLDI 236

[Close]

BLAST of Sgr024190 vs. NCBI nr
Match: XP_022990449.1 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 434.5 bits (1116), Expect = 5.9e-118
Identity = 214/236 (90.68%), Postives = 223/236 (94.49%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLRLLPFNELSPATCSFSSCSTIICSTERTSREESHCYRRTL 60
           MAVSTSCLSWVPT+ASNWK RLLPFNE S ATCS+SSC+T+ICSTERTSR ES C RR L
Sbjct: 1   MAVSTSCLSWVPTSASNWKPRLLPFNEPSTATCSYSSCTTVICSTERTSRVESQCNRRPL 60

Query: 61  LLGVGALATSLLPASSLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALATSL  A  LFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALATSLFAARPLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLEEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEG L+EVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGSLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT 180

Query: 181 FEYKLSSSAYSRTSFATIAIANGRYYTLVVGANDRRWRRYRNLLKVVADSFRVLDI 237
           FEYKLSS AYSRTSFATIA+ANGRYYTL+VGANDRRWRRYR++LKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAYSRTSFATIAVANGRYYTLIVGANDRRWRRYRDMLKVVADSFRVLDI 236

[Close]

BLAST of Sgr024190 vs. ExPASy Swiss-Prot
Match: O80634 (Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL1 PE=1 SV=2)

HSP 1 Score: 270.8 bits (691), Expect = 1.5e-71
Identity = 143/237 (60.34%), Postives = 173/237 (73.00%), Query Frame = 0


Query: 2   AVSTSCLSWVPTTASNWKLRLLPFNELSPATCSFSSCSTIICSTERTSREES--HCYRRT 61
           ++S  C  + PT +   K  +L  N    A C  SS      S+E T ++ S  +  RR 
Sbjct: 5   SLSIRCGGFSPTISH--KTEILCPNPSLKACCLLSSGGK-ADSSESTYQKGSGNNWKRRQ 64

Query: 62  LLLGVGALATSLLPASSLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDR 121
            L+GVG L  + +PA+ L AEE+PK+Y  FVD  DGYSYYYPSDWREFDFRAHDSAFKDR
Sbjct: 65  ALVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDSAFKDR 124

Query: 122 YLQLQNVRVKFIPTEKKDIHEEGPLEEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYY 181
           YLQLQNVRV+FIPTEK DIHE GP+EEVV  LVKH++AAPNQ ATIYDMKER  DGKNYY
Sbjct: 125 YLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVEDGKNYY 184

Query: 182 TFEYKLSSSAYSRTSFATIAIANGRYYTLVVGANDRRWRRYRNLLKVVADSFRVLDI 237
           TFEY L +  Y+ TSFAT+A+ N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Sbjct: 185 TFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 238

[Close]

BLAST of Sgr024190 vs. ExPASy Swiss-Prot
Match: P82538 (PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 4.6e-33
Identity = 74/192 (38.54%), Postives = 109/192 (56.77%), Query Frame = 0


Query: 44  STERTSREESHCYRRTLL-LGVGALATSLLPASSL-FAEEVPKNYRAFVDSTDGYSYYYP 103
           S+  +S  +  C RR ++  GV A   SLL  + L FA E  K + A  D+ D Y++ YP
Sbjct: 37  SSSSSSHLQDKCQRRLIVTFGVVAPWISLLSRAPLSFAAESKKGFLAVSDNKDAYAFLYP 96

Query: 104 SDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLEEVVNFLVKHRYAAPNQ 163
             W+E      D  +KD    L++V V  +PT K+ I E GP +++   L+K   A PNQ
Sbjct: 97  FGWQEVVIEGQDKVYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQIAETLIKKVLAPPNQ 156

Query: 164 KATIYDMKERTIDGKNYYTFEYKLSSSAYSRTSFATIAIANGRYYTLVVGANDRRWRRYR 223
           K T+ D  E  +DGK YY FE+ + +  Y+R +  TI + NG +YTL  GAN+RRW + +
Sbjct: 157 KTTLIDASEHDVDGKTYYQFEFTVQARNYTRHALGTITVFNGNFYTLTTGANERRWEKMK 216

Query: 224 NLLKVVADSFRV 234
           + L  V DSF++
Sbjct: 217 DRLHTVVDSFKI 228

[Close]

BLAST of Sgr024190 vs. ExPASy Swiss-Prot
Match: O23403 (PsbP domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD1 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 9.1e-05
Identity = 41/176 (23.30%), Postives = 72/176 (40.91%), Query Frame = 0


Query: 86  YRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKD---IHEEG 145
           +R ++D+ DGYS+ YP +W +      D  F+D  +  +N+ V+F      +   + + G
Sbjct: 109 FREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYTSLEDLG 168

Query: 146 PLEEVVNFLVKH--------RYAAPNQKATIYDMKERTIDGKNYYTFEYKLSSSA----- 205
             EEV   +++         R     Q   +        DGK YY  E  + S A     
Sbjct: 169 SPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSSRVADDGKLYYQVEVNIKSYANNNEL 228

Query: 206 ------------YSRTSFATIAIANGRYYTLVVGANDRRWRRYRNLLKVVADSFRV 234
                       ++R   A + + N R Y++ +   ++ +      L+ V DSFRV
Sbjct: 229 AVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQTPEKVFLEEEKDLRRVMDSFRV 284

[Close]

BLAST of Sgr024190 vs. ExPASy TrEMBL
Match: A0A6J1BVD2 (photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006093 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 4.7e-121
Identity = 222/237 (93.67%), Postives = 228/237 (96.20%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLRLLPFNE-LSPATCSFSSCSTIICSTERTSREESHCYRRT 60
           MAVSTSCLSWVPTTASN K RLLPFN+ LSPA+CSFSSCSTIICSTERTS EESHCYRR 
Sbjct: 1   MAVSTSCLSWVPTTASNLKPRLLPFNDLLSPASCSFSSCSTIICSTERTSPEESHCYRRP 60

Query: 61  LLLGVGALATSLLPASSLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDR 120
           LLLGVGALATSLLPASSLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDR
Sbjct: 61  LLLGVGALATSLLPASSLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDR 120

Query: 121 YLQLQNVRVKFIPTEKKDIHEEGPLEEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYY 180
           YLQLQNVRVKFIPTEK+DIHEEGP+EEVVNFLV HRYAAPNQ+ATIYDMKERTIDGK YY
Sbjct: 121 YLQLQNVRVKFIPTEKRDIHEEGPIEEVVNFLVNHRYAAPNQQATIYDMKERTIDGKIYY 180

Query: 181 TFEYKLSSSAYSRTSFATIAIANGRYYTLVVGANDRRWRRYRNLLKVVADSFRVLDI 237
           TFEYKLSS AYSRTSFATIAI NGRYYTLVVGANDRRWRRYRN+LKVVADSFRVLDI
Sbjct: 181 TFEYKLSSRAYSRTSFATIAIGNGRYYTLVVGANDRRWRRYRNMLKVVADSFRVLDI 237

[Close]

BLAST of Sgr024190 vs. ExPASy TrEMBL
Match: A0A6J1GN93 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455996 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 2.6e-119
Identity = 216/236 (91.53%), Postives = 224/236 (94.92%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLRLLPFNELSPATCSFSSCSTIICSTERTSREESHCYRRTL 60
           MAVSTSCLSWVPT+ASNWK RLLPFNE S ATCS+SSC+TIICSTERTSR ESHC RR L
Sbjct: 1   MAVSTSCLSWVPTSASNWKPRLLPFNEPSTATCSYSSCTTIICSTERTSRVESHCNRRPL 60

Query: 61  LLGVGALATSLLPASSLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALA SL  AS LFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALAASLFAASPLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLEEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEG L+EVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGSLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT 180

Query: 181 FEYKLSSSAYSRTSFATIAIANGRYYTLVVGANDRRWRRYRNLLKVVADSFRVLDI 237
           FEYKLSS AYSRTSFATIA+ANGRYYTL+VGANDRRWRRYR++LKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAYSRTSFATIAVANGRYYTLIVGANDRRWRRYRDMLKVVADSFRVLDI 236

[Close]

BLAST of Sgr024190 vs. ExPASy TrEMBL
Match: A0A6J1JS28 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487305 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 2.8e-118
Identity = 214/236 (90.68%), Postives = 223/236 (94.49%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLRLLPFNELSPATCSFSSCSTIICSTERTSREESHCYRRTL 60
           MAVSTSCLSWVPT+ASNWK RLLPFNE S ATCS+SSC+T+ICSTERTSR ES C RR L
Sbjct: 1   MAVSTSCLSWVPTSASNWKPRLLPFNEPSTATCSYSSCTTVICSTERTSRVESQCNRRPL 60

Query: 61  LLGVGALATSLLPASSLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALATSL  A  LFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALATSLFAARPLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLEEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEG L+EVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGSLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT 180

Query: 181 FEYKLSSSAYSRTSFATIAIANGRYYTLVVGANDRRWRRYRNLLKVVADSFRVLDI 237
           FEYKLSS AYSRTSFATIA+ANGRYYTL+VGANDRRWRRYR++LKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAYSRTSFATIAVANGRYYTLIVGANDRRWRRYRDMLKVVADSFRVLDI 236

[Close]

BLAST of Sgr024190 vs. ExPASy TrEMBL
Match: A0A6J1GN22 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455996 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 3.2e-117
Identity = 215/236 (91.10%), Postives = 223/236 (94.49%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLRLLPFNELSPATCSFSSCSTIICSTERTSREESHCYRRTL 60
           MAVSTSCLSWVPT+ASNWK RLLPFNE S ATCS+SSC+TIICSTERTSR ESHC RR L
Sbjct: 1   MAVSTSCLSWVPTSASNWKPRLLPFNEPSTATCSYSSCTTIICSTERTSRVESHCNRRPL 60

Query: 61  LLGVGALATSLLPASSLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALA SL  AS LFA EVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALAASLFAASPLFA-EVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLEEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEG L+EVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGSLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT 180

Query: 181 FEYKLSSSAYSRTSFATIAIANGRYYTLVVGANDRRWRRYRNLLKVVADSFRVLDI 237
           FEYKLSS AYSRTSFATIA+ANGRYYTL+VGANDRRWRRYR++LKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAYSRTSFATIAVANGRYYTLIVGANDRRWRRYRDMLKVVADSFRVLDI 235

[Close]

BLAST of Sgr024190 vs. ExPASy TrEMBL
Match: A0A6J1JMZ7 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487305 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.5e-116
Identity = 213/236 (90.25%), Postives = 222/236 (94.07%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLRLLPFNELSPATCSFSSCSTIICSTERTSREESHCYRRTL 60
           MAVSTSCLSWVPT+ASNWK RLLPFNE S ATCS+SSC+T+ICSTERTSR ES C RR L
Sbjct: 1   MAVSTSCLSWVPTSASNWKPRLLPFNEPSTATCSYSSCTTVICSTERTSRVESQCNRRPL 60

Query: 61  LLGVGALATSLLPASSLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALATSL  A  LFA EVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALATSLFAARPLFA-EVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLEEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEG L+EVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGSLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT 180

Query: 181 FEYKLSSSAYSRTSFATIAIANGRYYTLVVGANDRRWRRYRNLLKVVADSFRVLDI 237
           FEYKLSS AYSRTSFATIA+ANGRYYTL+VGANDRRWRRYR++LKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAYSRTSFATIAVANGRYYTLIVGANDRRWRRYRDMLKVVADSFRVLDI 235

[Close]

BLAST of Sgr024190 vs. TAIR 10
Match: AT2G39470.2 (PsbP-like protein 2 )

HSP 1 Score: 271.2 bits (692), Expect = 8.0e-73
Identity = 128/180 (71.11%), Postives = 149/180 (82.78%), Query Frame = 0


Query: 57  RRTLLLGVGALATSLLPASSLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAF 116
           RR  L+GVG L  + +PA+ L AEE+PK+Y  FVD  DGYSYYYPSDWREFDFRAHDSAF
Sbjct: 51  RRQALVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDSAF 110

Query: 117 KDRYLQLQNVRVKFIPTEKKDIHEEGPLEEVVNFLVKHRYAAPNQKATIYDMKERTIDGK 176
           KDRYLQLQNVRV+FIPTEK DIHE GP+EEVV  LVKH++AAPNQ ATIYDMKER  DGK
Sbjct: 111 KDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVEDGK 170

Query: 177 NYYTFEYKLSSSAYSRTSFATIAIANGRYYTLVVGANDRRWRRYRNLLKVVADSFRVLDI 236
           NYYTFEY L +  Y+ TSFAT+A+ N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Sbjct: 171 NYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 230

[Close]

BLAST of Sgr024190 vs. TAIR 10
Match: AT2G39470.1 (PsbP-like protein 2 )

HSP 1 Score: 270.8 bits (691), Expect = 1.0e-72
Identity = 143/237 (60.34%), Postives = 173/237 (73.00%), Query Frame = 0


Query: 2   AVSTSCLSWVPTTASNWKLRLLPFNELSPATCSFSSCSTIICSTERTSREES--HCYRRT 61
           ++S  C  + PT +   K  +L  N    A C  SS      S+E T ++ S  +  RR 
Sbjct: 5   SLSIRCGGFSPTISH--KTEILCPNPSLKACCLLSSGGK-ADSSESTYQKGSGNNWKRRQ 64

Query: 62  LLLGVGALATSLLPASSLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDR 121
            L+GVG L  + +PA+ L AEE+PK+Y  FVD  DGYSYYYPSDWREFDFRAHDSAFKDR
Sbjct: 65  ALVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDSAFKDR 124

Query: 122 YLQLQNVRVKFIPTEKKDIHEEGPLEEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYY 181
           YLQLQNVRV+FIPTEK DIHE GP+EEVV  LVKH++AAPNQ ATIYDMKER  DGKNYY
Sbjct: 125 YLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVEDGKNYY 184

Query: 182 TFEYKLSSSAYSRTSFATIAIANGRYYTLVVGANDRRWRRYRNLLKVVADSFRVLDI 237
           TFEY L +  Y+ TSFAT+A+ N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Sbjct: 185 TFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 238

[Close]

BLAST of Sgr024190 vs. TAIR 10
Match: AT2G39470.3 (PsbP-like protein 2 )

HSP 1 Score: 184.1 bits (466), Expect = 1.3e-46
Identity = 87/114 (76.32%), Postives = 97/114 (85.09%), Query Frame = 0


Query: 57  RRTLLLGVGALATSLLPASSLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAF 116
           RR  L+GVG L  + +PA+ L AEE+PK+Y  FVD  DGYSYYYPSDWREFDFRAHDSAF
Sbjct: 51  RRQALVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDSAF 110

Query: 117 KDRYLQLQNVRVKFIPTEKKDIHEEGPLEEVVNFLVKHRYAAPNQKATIYDMKE 171
           KDRYLQLQNVRV+FIPTEK DIHE GP+EEVV  LVKH++AAPNQ ATIYDMKE
Sbjct: 111 KDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKE 164

[Close]

BLAST of Sgr024190 vs. TAIR 10
Match: AT3G55330.1 (PsbP-like protein 1 )

HSP 1 Score: 142.9 bits (359), Expect = 3.3e-34
Identity = 74/192 (38.54%), Postives = 109/192 (56.77%), Query Frame = 0


Query: 44  STERTSREESHCYRRTLL-LGVGALATSLLPASSL-FAEEVPKNYRAFVDSTDGYSYYYP 103
           S+  +S  +  C RR ++  GV A   SLL  + L FA E  K + A  D+ D Y++ YP
Sbjct: 37  SSSSSSHLQDKCQRRLIVTFGVVAPWISLLSRAPLSFAAESKKGFLAVSDNKDAYAFLYP 96

Query: 104 SDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLEEVVNFLVKHRYAAPNQ 163
             W+E      D  +KD    L++V V  +PT K+ I E GP +++   L+K   A PNQ
Sbjct: 97  FGWQEVVIEGQDKVYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQIAETLIKKVLAPPNQ 156

Query: 164 KATIYDMKERTIDGKNYYTFEYKLSSSAYSRTSFATIAIANGRYYTLVVGANDRRWRRYR 223
           K T+ D  E  +DGK YY FE+ + +  Y+R +  TI + NG +YTL  GAN+RRW + +
Sbjct: 157 KTTLIDASEHDVDGKTYYQFEFTVQARNYTRHALGTITVFNGNFYTLTTGANERRWEKMK 216

Query: 224 NLLKVVADSFRV 234
           + L  V DSF++
Sbjct: 217 DRLHTVVDSFKI 228

[Close]

BLAST of Sgr024190 vs. TAIR 10
Match: AT4G15510.1 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 48.9 bits (115), Expect = 6.5e-06
Identity = 41/176 (23.30%), Postives = 72/176 (40.91%), Query Frame = 0


Query: 86  YRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKD---IHEEG 145
           +R ++D+ DGYS+ YP +W +      D  F+D  +  +N+ V+F      +   + + G
Sbjct: 109 FREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYTSLEDLG 168

Query: 146 PLEEVVNFLVKH--------RYAAPNQKATIYDMKERTIDGKNYYTFEYKLSSSA----- 205
             EEV   +++         R     Q   +        DGK YY  E  + S A     
Sbjct: 169 SPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSSRVADDGKLYYQVEVNIKSYANNNEL 228

Query: 206 ------------YSRTSFATIAIANGRYYTLVVGANDRRWRRYRNLLKVVADSFRV 234
                       ++R   A + + N R Y++ +   ++ +      L+ V DSFRV
Sbjct: 229 AVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQTPEKVFLEEEKDLRRVMDSFRV 284

The following BLAST results are available for this feature:

BLAST of Sgr024190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133531.1	9.7e-121	93.67	photosynthetic NDH subunit of lumenal location 1, chloroplastic [Momordica chara...	[more]
XP_022953447.1	5.3e-119	91.53	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucu...	[more]
XP_038889544.1	5.3e-119	92.37	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Beni...	[more]
XP_023534746.1	3.5e-118	90.68	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucu...	[more]
XP_022990449.1	5.9e-118	90.68	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucu...	[more]

BLAST of Sgr024190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80634	1.5e-71	60.34	Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis t...	[more]
P82538	4.6e-33	38.54	PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 ...	[more]
O23403	9.1e-05	23.30	PsbP domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Sgr024190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BVD2	4.7e-121	93.67	photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Momordica cha...	[more]
A0A6J1GN93	2.6e-119	91.53	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cu...	[more]
A0A6J1JS28	2.8e-118	90.68	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cu...	[more]
A0A6J1GN22	3.2e-117	91.10	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 OS=Cu...	[more]
A0A6J1JMZ7	3.5e-116	90.25	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 OS=Cu...	[more]

BLAST of Sgr024190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39470.2	8.0e-73	71.11	PsbP-like protein 2	[more]
AT2G39470.1	1.0e-72	60.34	PsbP-like protein 2	[more]
AT2G39470.3	1.3e-46	76.32	PsbP-like protein 2	[more]
AT3G55330.1	3.3e-34	38.54	PsbP-like protein 1	[more]
AT4G15510.1	6.5e-06	23.30	Photosystem II reaction center PsbP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 81..234 e-value: 1.5E-37 score: 131.3
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 1..236
None	No IPR available	PANTHER	PTHR31407:SF10	PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 1, CHLOROPLASTIC	coord: 1..236
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 85..233 e-value: 2.8E-40 score: 138.0
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 87..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr024190.1	Sgr024190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding