Sgr024062 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr024062
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionUnknown protein
Locationtig00001047: 2934128 .. 2935090 (-)
RNA-Seq ExpressionSgr024062
SyntenySgr024062
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGCTTGCGAACCGAACGCCACGTACAGAACTGGTTTTCCTTGGCTTCGTTTCTGGTCTAGCCACTCGAGCCATGTGGGTTTGTTGTGTGGAGCTTCTTTCGGCGTCTGGGCTAAGCAGAGCGGTCCGAGGTTCCAAGCCTTTGGCCTGGCTCCGCCGTGTTTCATGTAATCGCAGAAGACTTGCTCGAGCTCGTAGAAGCTGTTGACAATGGATCCGTAGCTGTTGATTGTTGCTTGGATCGAAGCCATCAGAAATCGAGAGTGAAGACTCGTCGGGTCGGCTTCCGGCAAGAAAACTGGATCCCAGTCGCTCCGGGTGACCTTCACCCATGGAAAGCTACTCACGGTGATCAACTCGTCGTCGGACTCAACTCCGGCGAGGAGTCTATCTTTCATAACCGCGACTGAAATCGCGCCGACGAAATTTGACAGACCACTAAAAGAAATCCGGGGGATGCCGAACTTGGAAGCAGACTCGAGGGTCCACCAGAGGAAGCCATCGGAGACTAAGAAGTTGACGGGGGGGAGAGCTTGGAGCTCCTTCTCAAAATCCGGTTGCATCAGCTTGGTGGCCATGCAAAACTCAGGGAACAGAGAGAGTGAAGGGAGCGTCTCGGTGCTTTCAACCCCCGCGGGGAGGCCGGGGATATCCTGGGGAAAAGAAAGCTCGATAATGGAGACGGAAGTGTCTGAGAGAAACTGGGAGATAAAGGGACGATGGGCAGCAGTGGCGAAGATGGTGACAGAGAGGTGGCGGAAGCGGCGGCGGAGGAGGCGGACGAGGTGCAGAAGCGGGATGGTGTGGCCTTTCGCCATGAATGGAAAGAAAACAACATGGGGAGATGGAAAATCAGAGGAAATGGAACCCATAACGAAAGTTCCTCTGGTCGACAGAAAGCACTGGCTAATGGCTACGGCTTTCTCTCTCTCTATCTTCTTTGGCCCTTTTCTTCTTTAA

mRNA sequence

ATGTCTGCTTGCGAACCGAACGCCACGTACAGAACTGGTTTTCCTTGGCTTCGTTTCTGGTCTAGCCACTCGAGCCATGTGGGTTTGTTGTGTGGAGCTTCTTTCGGCGTCTGGGCTAAGCAGAGCGGTCCGAGGTTCCAAGCCTTTGGCCTGGCTCCGCCGTGTTTCATACTCGTCGGGTCGGCTTCCGGCAAGAAAACTGGATCCCAGTCGCTCCGGGTGACCTTCACCCATGGAAAGCTACTCACGGTGATCAACTCGTCGTCGGACTCAACTCCGGCGAGGAGTCTATCTTTCATAACCGCGACTGAAATCGCGCCGACGAAATTTGACAGACCACTAAAAGAAATCCGGGGGATGCCGAACTTGGAAGCAGACTCGAGGGTCCACCAGAGGAAGCCATCGGAGACTAAGAAGTTGACGGGGGGGAGAGCTTGGAGCTCCTTCTCAAAATCCGGTTGCATCAGCTTGGTGGCCATGCAAAACTCAGGGAACAGAGAGAGTGAAGGGAGCGTCTCGGTGCTTTCAACCCCCGCGGGGAGGCCGGGGATATCCTGGGGAAAAGAAAGCTCGATAATGGAGACGGAAGTGTCTGAGAGAAACTGGGAGATAAAGGGACGATGGGCAGCAGTGGCGAAGATGGTGACAGAGAGGTGGCGGAAGCGGCGGCGGAGGAGGCGGACGAGGTGCAGAAGCGGGATGGTGTGGCCTTTCGCCATGAATGGAAAGAAAACAACATGGGGAGATGGAAAATCAGAGGAAATGGAACCCATAACGAAAGTTCCTCTGGTCGACAGAAAGCACTGGCTAATGGCTACGGCTTTCTCTCTCTCTATCTTCTTTGGCCCTTTTCTTCTTTAA

Coding sequence (CDS)

ATGTCTGCTTGCGAACCGAACGCCACGTACAGAACTGGTTTTCCTTGGCTTCGTTTCTGGTCTAGCCACTCGAGCCATGTGGGTTTGTTGTGTGGAGCTTCTTTCGGCGTCTGGGCTAAGCAGAGCGGTCCGAGGTTCCAAGCCTTTGGCCTGGCTCCGCCGTGTTTCATACTCGTCGGGTCGGCTTCCGGCAAGAAAACTGGATCCCAGTCGCTCCGGGTGACCTTCACCCATGGAAAGCTACTCACGGTGATCAACTCGTCGTCGGACTCAACTCCGGCGAGGAGTCTATCTTTCATAACCGCGACTGAAATCGCGCCGACGAAATTTGACAGACCACTAAAAGAAATCCGGGGGATGCCGAACTTGGAAGCAGACTCGAGGGTCCACCAGAGGAAGCCATCGGAGACTAAGAAGTTGACGGGGGGGAGAGCTTGGAGCTCCTTCTCAAAATCCGGTTGCATCAGCTTGGTGGCCATGCAAAACTCAGGGAACAGAGAGAGTGAAGGGAGCGTCTCGGTGCTTTCAACCCCCGCGGGGAGGCCGGGGATATCCTGGGGAAAAGAAAGCTCGATAATGGAGACGGAAGTGTCTGAGAGAAACTGGGAGATAAAGGGACGATGGGCAGCAGTGGCGAAGATGGTGACAGAGAGGTGGCGGAAGCGGCGGCGGAGGAGGCGGACGAGGTGCAGAAGCGGGATGGTGTGGCCTTTCGCCATGAATGGAAAGAAAACAACATGGGGAGATGGAAAATCAGAGGAAATGGAACCCATAACGAAAGTTCCTCTGGTCGACAGAAAGCACTGGCTAATGGCTACGGCTTTCTCTCTCTCTATCTTCTTTGGCCCTTTTCTTCTTTAA

Protein sequence

MSACEPNATYRTGFPWLRFWSSHSSHVGLLCGASFGVWAKQSGPRFQAFGLAPPCFILVGSASGKKTGSQSLRVTFTHGKLLTVINSSSDSTPARSLSFITATEIAPTKFDRPLKEIRGMPNLEADSRVHQRKPSETKKLTGGRAWSSFSKSGCISLVAMQNSGNRESEGSVSVLSTPAGRPGISWGKESSIMETEVSERNWEIKGRWAAVAKMVTERWRKRRRRRRTRCRSGMVWPFAMNGKKTTWGDGKSEEMEPITKVPLVDRKHWLMATAFSLSIFFGPFLL
Homology
[Close]
BLAST of Sgr024062 vs. NCBI nr
Match: GEY35510.1 (oxoglutarate/iron-dependent dioxygenase [Tanacetum cinerariifolium])

HSP 1 Score: 70.5 bits (171), Expect = 2.7e-08
Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = 0 

Query: 126 DSRVHQRKPSETKKLTG-GRAWSSFSKSGCISLVAMQNSGNRESEGSVSVLSTPAGRPGI 185
           DS V  +KPS T K+TG    W++FSKSGC+S V       R+ EGS+S+LSTP G PG+
Sbjct: 164 DSSVQSKKPSVTIKVTGVFNDWTAFSKSGCMSFVEDPKGKKRDIEGSLSMLSTPGGTPGM 223

Query: 186 SWGKESSIMETEVSERNWEI 205
            +GK S +ME +VS+   E+
Sbjct: 224 FFGKGSEMMEVDVSKSEVEM 243

The following BLAST results are available for this feature:
BLAST of Sgr024062 vs. NCBI nr
Match NameE-valueIdentityDescription
GEY35510.12.7e-0848.75oxoglutarate/iron-dependent dioxygenase [Tanacetum cinerariifolium][more]
BLAST of Sgr024062 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr024062 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr024062 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr024062.1Sgr024062.1mRNA