Sgr023816 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr023816
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00000892: 7073217 .. 7073864 (+)
RNA-Seq Expression	Sgr023816
Synteny	Sgr023816

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGTCCGGCAGTCTCTCCGGCCAAATCTGATTCTACATAGCCAAGAGGAGGACCGTAGCTTCAACATAATCCGAAAATTACCATTATGATTTTTGTTAGCATATCAGAGTAAAAAAGTCTGTTGACACACCAGAACTAGACTCAGCGAACCGAGTCAACTCGGAGTTCTTTTTTTCTAGTCGGCGGCTTGGCAGTACTGCAGAACTTCAGCTGGCTGGCCGGCCGGCGGCTCAGCCACTTGATCACTTTTAACAAACGGATTTATTATCAGCAAATCCATGCAGTAGAGGTCTAGATTCGCCTAAAAACTCGAGGTTCTTTCTGATATCTTCGTCGCAGCGCCTCTGGAAATCCATGAGATTCAAATTTCGCGACGAGTGACTCAACTCGGAGCGAGACACGACGCGGAGAACCTCTTCGAACACCGATTCGTCGCACGGAAGCGCCAGAGGACCTCGCGTTGCGAAACCGTATTCTTCTTCGGCCTGCGACAGTAACTTCCGGAAGATCGGATGGTTCAGGAACGTAGCGCGAACGATGAATCGTCTGCAACCGCTGCCGACGCAGACGGCCACGTGACCGGCGGGGACGTCGGACGGTGCACGGAAGGCAGCGGCGCGTGCCTTCTTACGCCAGCGTTGTAG

mRNA sequence

ATGGCCGTCCGGCAGTCTCTCCGGCCAAATCTGATTCTACATAGCCAAGAGGAGGACCCGCCTCTGGAAATCCATGAGATTCAAATTTCGCGACGAGTGACTCAACTCGGAGCGAGACACGACGCGGAGAACCTCTTCGAACACCGATTCGTCGCACGGAAGCGCCAGAGGACCTCGCGTTGCGAAACCGAACGTAGCGCGAACGATGAATCGTCTGCAACCGCTGCCGACGCAGACGGCCACGTGACCGGCGGGGACGTCGGACGGTGCACGGAAGGCAGCGGCGCGTGCCTTCTTACGCCAGCGTTGTAG

Coding sequence (CDS)

ATGGCCGTCCGGCAGTCTCTCCGGCCAAATCTGATTCTACATAGCCAAGAGGAGGACCCGCCTCTGGAAATCCATGAGATTCAAATTTCGCGACGAGTGACTCAACTCGGAGCGAGACACGACGCGGAGAACCTCTTCGAACACCGATTCGTCGCACGGAAGCGCCAGAGGACCTCGCGTTGCGAAACCGAACGTAGCGCGAACGATGAATCGTCTGCAACCGCTGCCGACGCAGACGGCCACGTGACCGGCGGGGACGTCGGACGGTGCACGGAAGGCAGCGGCGCGTGCCTTCTTACGCCAGCGTTGTAG

Protein sequence

MAVRQSLRPNLILHSQEEDPPLEIHEIQISRRVTQLGARHDAENLFEHRFVARKRQRTSRCETERSANDESSATAADADGHVTGGDVGRCTEGSGACLLTPAL

Homology

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BLAST of Sgr023816 vs. NCBI nr
Match: KAF3446758.1 (hypothetical protein FNV43_RR11938 [Rhamnella rubrinervis])

HSP 1 Score: 54.7 bits (130), Expect = 5.5e-04
Identity = 39/98 (39.80%), Postives = 53/98 (54.08%), Query Frame = 0


Query: 22  LEIHEIQISRRVTQLGARHDAENLFEHRFVARKRQRTSRCET-----------------E 81
           L++ EI+ S  VT+LG+ ++ E   E RFVAR  +RT   E                   
Sbjct: 23  LKVLEIEKSGGVTRLGSGNEPEEFLEKRFVARNGERTLVGEAVFFFGLDKKVLEDGVVQV 82

Query: 82  RSANDESSATAADADGHVTGGDVGRCTEGSGACLLTPA 103
           R A++ESSAT  DADGHV+GGD+GR      + L+ PA
Sbjct: 83  RRADNESSATPTDADGHVSGGDIGRYAGCGHSGLVAPA 120

The following BLAST results are available for this feature:

BLAST of Sgr023816 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF3446758.1	5.5e-04	39.80	hypothetical protein FNV43_RR11938 [Rhamnella rubrinervis]	[more]

BLAST of Sgr023816 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr023816 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr023816 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr023816.1	Sgr023816.1	mRNA