Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCTTCTCCCATTAACTCCCAGCAGTCTCACTCCTCTTCTTATTCTCCGAGTTTTCTGTCACCCAAACGACGCAGCTCGCCGGAGTTGGAAATCTCCGATATCGAAATGACAACTCTTCAATCCTACACCAGCCTCAAGGACCTCTTGCCGGAGACCCCATCGCCGCCGTCCACCAAGTCGCCGTTGCAGAACTCCAGCTGGAACGAACTCCCGATCAAGAACCCACTGGTGAAGCACGCCGCCTTGGCTTACCTGCAGCCGATGCTCAGGCCGCCGGAGGTAGGAGACCGCGGGTTCATGCGGATGCTGAAGAAGCATGGATTCGGATGCATCGAGTGGCTCGGCGCCGTCGTCTTGGCCGCTATCGGAGAGCTCTCTGGCGGAGTGAGAAGGTGGGAGTGA
mRNA sequence
ATGGAAGCTTCTCCCATTAACTCCCAGCAGTCTCACTCCTCTTCTTATTCTCCGAGTTTTCTGTCACCCAAACGACGCAGCTCGCCGGAGTTGGAAATCTCCGATATCGAAATGACAACTCTTCAATCCTACACCAGCCTCAAGGACCTCTTGCCGGAGACCCCATCGCCGCCGTCCACCAAGTCGCCGTTGCAGAACTCCAGCTGGAACGAACTCCCGATCAAGAACCCACTGGTGAAGCACGCCGCCTTGGCTTACCTGCAGCCGATGCTCAGGCCGCCGGAGGTAGGAGACCGCGGGTTCATGCGGATGCTGAAGAAGCATGGATTCGGATGCATCGAGTGGCTCGGCGCCGTCGTCTTGGCCGCTATCGGAGAGCTCTCTGGCGGAGTGAGAAGGTGGGAGTGA
Coding sequence (CDS)
ATGGAAGCTTCTCCCATTAACTCCCAGCAGTCTCACTCCTCTTCTTATTCTCCGAGTTTTCTGTCACCCAAACGACGCAGCTCGCCGGAGTTGGAAATCTCCGATATCGAAATGACAACTCTTCAATCCTACACCAGCCTCAAGGACCTCTTGCCGGAGACCCCATCGCCGCCGTCCACCAAGTCGCCGTTGCAGAACTCCAGCTGGAACGAACTCCCGATCAAGAACCCACTGGTGAAGCACGCCGCCTTGGCTTACCTGCAGCCGATGCTCAGGCCGCCGGAGGTAGGAGACCGCGGGTTCATGCGGATGCTGAAGAAGCATGGATTCGGATGCATCGAGTGGCTCGGCGCCGTCGTCTTGGCCGCTATCGGAGAGCTCTCTGGCGGAGTGAGAAGGTGGGAGTGA
Protein sequence
MEASPINSQQSHSSSYSPSFLSPKRRSSPELEISDIEMTTLQSYTSLKDLLPETPSPPSTKSPLQNSSWNELPIKNPLVKHAALAYLQPMLRPPEVGDRGFMRMLKKHGFGCIEWLGAVVLAAIGELSGGVRRWE
Homology
BLAST of Sgr023770 vs. NCBI nr
Match:
KAG6571006.1 (hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010836.1 hypothetical protein SDJN02_27632, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 171.0 bits (432), Expect = 6.9e-39
Identity = 92/120 (76.67%), Postives = 97/120 (80.83%), Query Frame = 0
Query: 17 SPSFLSPKR-RSSPELEISDIEMTTLQSYTSLKDLLPETPS-PPSTKSPLQNSSWNELPI 76
SP+FLS R SS ELE SDIEMT LQSYTSLKDLLP+TPS PPS PLQ +W+ELPI
Sbjct: 5 SPTFLSSDRLLSSSELEFSDIEMTPLQSYTSLKDLLPDTPSPPPSAAYPLQCPAWDELPI 64
Query: 77 KNPLVKHAALAYLQPMLRPPEVGDRGFMRMLKKHGFGCIEWLGAVVLAAIGELSGGVRRW 135
KNPLVKHAALAYLQPML PP GDR FMR LKKHGFGCIEWL +A IGELSGGVRRW
Sbjct: 65 KNPLVKHAALAYLQPMLTPPAAGDRSFMRRLKKHGFGCIEWL----VAVIGELSGGVRRW 120
BLAST of Sgr023770 vs. NCBI nr
Match:
XP_007199228.2 (uncharacterized protein LOC18768692 [Prunus persica] >ONH92342.1 hypothetical protein PRUPE_8G169400 [Prunus persica])
HSP 1 Score: 140.2 bits (352), Expect = 1.3e-29
Identity = 80/139 (57.55%), Postives = 99/139 (71.22%), Query Frame = 0
Query: 4 SPINSQQSHSSSYSPSFLSPKRRSSPELEISDIEMTTLQ--SYTSLKDLLPETPSPPSTK 63
+P + S+ S+SPSFL P E+EISDIEM T+Q +YTSLKDLLP SPP+
Sbjct: 8 NPNPNPNSNHHSHSPSFLLP--NGFGEIEISDIEMITIQTVTYTSLKDLLP--ASPPTIM 67
Query: 64 SPLQNSSWNELPIKNPLVKHAALAYLQPMLRPPEVGDRGFMRMLKK-------HGFGCIE 123
SP QNSSW+E+PIKNPLVKHAALAYLQPM PPEVGD+G +RML++ +G GC
Sbjct: 68 SPTQNSSWHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCLCEGTNGVGCFS 127
Query: 124 WLGAVVLAAIGELSGGVRR 134
WLG VVL+ + ++ GGV R
Sbjct: 128 WLGDVVLSGVRDVFGGVCR 142
BLAST of Sgr023770 vs. NCBI nr
Match:
XP_034228819.1 (uncharacterized protein LOC117637881 [Prunus dulcis] >VVA15725.1 PREDICTED: MTR_1g112960 [Prunus dulcis])
HSP 1 Score: 139.8 bits (351), Expect = 1.7e-29
Identity = 80/139 (57.55%), Postives = 99/139 (71.22%), Query Frame = 0
Query: 4 SPINSQQSHSSSYSPSFLSPKRRSSPELEISDIEMTTLQ--SYTSLKDLLPETPSPPSTK 63
+P + S+ S+SPSFL P E+EISDIEM T+Q +YTSLKDLLP SPP+
Sbjct: 8 NPNPNPNSNHHSHSPSFLLP--NGFGEIEISDIEMITIQTVTYTSLKDLLP--ASPPTIM 67
Query: 64 SPLQNSSWNELPIKNPLVKHAALAYLQPMLRPPEVGDRGFMRMLKK-------HGFGCIE 123
SP QNSSW+E+PIKNPLVKHAALAYLQPM PPEVGD+G +RML++ +G GC
Sbjct: 68 SPTQNSSWHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCLCEGANGVGCFA 127
Query: 124 WLGAVVLAAIGELSGGVRR 134
WLG VVL+ + ++ GGV R
Sbjct: 128 WLGDVVLSGVRDVFGGVCR 142
BLAST of Sgr023770 vs. NCBI nr
Match:
CAB4290915.1 (unnamed protein product [Prunus armeniaca] >CAB4321235.1 unnamed protein product [Prunus armeniaca])
HSP 1 Score: 139.0 bits (349), Expect = 2.9e-29
Identity = 79/139 (56.83%), Postives = 99/139 (71.22%), Query Frame = 0
Query: 4 SPINSQQSHSSSYSPSFLSPKRRSSPELEISDIEMTTLQ--SYTSLKDLLPETPSPPSTK 63
+P + S+ S+SPSFL P E+EISDIEM T+Q +YTSL+DLLP SPP+
Sbjct: 8 NPHPNPNSNHHSHSPSFLLP--NGFGEIEISDIEMITIQTVTYTSLRDLLP--ASPPTIM 67
Query: 64 SPLQNSSWNELPIKNPLVKHAALAYLQPMLRPPEVGDRGFMRMLK-------KHGFGCIE 123
SP QNSSW+E+PIKNPLVKHAALAYLQPM PPEVGD+G +RML+ ++G GC
Sbjct: 68 SPTQNSSWHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCLCGGENGLGCFA 127
Query: 124 WLGAVVLAAIGELSGGVRR 134
WLG VVL+ + ++ GGV R
Sbjct: 128 WLGDVVLSGVRDVFGGVCR 142
BLAST of Sgr023770 vs. NCBI nr
Match:
XP_008236068.1 (PREDICTED: uncharacterized protein LOC103334865 [Prunus mume])
HSP 1 Score: 139.0 bits (349), Expect = 2.9e-29
Identity = 79/139 (56.83%), Postives = 99/139 (71.22%), Query Frame = 0
Query: 4 SPINSQQSHSSSYSPSFLSPKRRSSPELEISDIEMTTLQ--SYTSLKDLLPETPSPPSTK 63
+P + S+ S+SPSFL P E+EISDIEM T+Q +YTSL+DLLP SPP+
Sbjct: 8 NPHPNPNSNHHSHSPSFLLP--NGFGEIEISDIEMITIQTVTYTSLRDLLP--ASPPTIM 67
Query: 64 SPLQNSSWNELPIKNPLVKHAALAYLQPMLRPPEVGDRGFMRMLK-------KHGFGCIE 123
SP QNSSW+E+PIKNPLVKHAALAYLQPM PPEVGD+G +RML+ ++G GC
Sbjct: 68 SPTQNSSWHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCLCGGENGLGCFA 127
Query: 124 WLGAVVLAAIGELSGGVRR 134
WLG VVL+ + ++ GGV R
Sbjct: 128 WLGDVVLSGVRDVFGGVCR 142
BLAST of Sgr023770 vs. ExPASy TrEMBL
Match:
A0A251MZ17 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G169400 PE=4 SV=1)
HSP 1 Score: 140.2 bits (352), Expect = 6.4e-30
Identity = 80/139 (57.55%), Postives = 99/139 (71.22%), Query Frame = 0
Query: 4 SPINSQQSHSSSYSPSFLSPKRRSSPELEISDIEMTTLQ--SYTSLKDLLPETPSPPSTK 63
+P + S+ S+SPSFL P E+EISDIEM T+Q +YTSLKDLLP SPP+
Sbjct: 8 NPNPNPNSNHHSHSPSFLLP--NGFGEIEISDIEMITIQTVTYTSLKDLLP--ASPPTIM 67
Query: 64 SPLQNSSWNELPIKNPLVKHAALAYLQPMLRPPEVGDRGFMRMLKK-------HGFGCIE 123
SP QNSSW+E+PIKNPLVKHAALAYLQPM PPEVGD+G +RML++ +G GC
Sbjct: 68 SPTQNSSWHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCLCEGTNGVGCFS 127
Query: 124 WLGAVVLAAIGELSGGVRR 134
WLG VVL+ + ++ GGV R
Sbjct: 128 WLGDVVLSGVRDVFGGVCR 142
BLAST of Sgr023770 vs. ExPASy TrEMBL
Match:
M5VHF3 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa022032mg PE=4 SV=1)
HSP 1 Score: 140.2 bits (352), Expect = 6.4e-30
Identity = 80/139 (57.55%), Postives = 99/139 (71.22%), Query Frame = 0
Query: 4 SPINSQQSHSSSYSPSFLSPKRRSSPELEISDIEMTTLQ--SYTSLKDLLPETPSPPSTK 63
+P + S+ S+SPSFL P E+EISDIEM T+Q +YTSLKDLLP SPP+
Sbjct: 8 NPNPNPNSNHHSHSPSFLLP--NGFGEIEISDIEMITIQTVTYTSLKDLLP--ASPPTIM 67
Query: 64 SPLQNSSWNELPIKNPLVKHAALAYLQPMLRPPEVGDRGFMRMLKK-------HGFGCIE 123
SP QNSSW+E+PIKNPLVKHAALAYLQPM PPEVGD+G +RML++ +G GC
Sbjct: 68 SPTQNSSWHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCLCEGTNGVGCFS 127
Query: 124 WLGAVVLAAIGELSGGVRR 134
WLG VVL+ + ++ GGV R
Sbjct: 128 WLGDVVLSGVRDVFGGVCR 142
BLAST of Sgr023770 vs. ExPASy TrEMBL
Match:
A0A5E4EIX6 (PREDICTED: MTR_1g112960 OS=Prunus dulcis OX=3755 GN=ALMOND_2B029195 PE=4 SV=1)
HSP 1 Score: 139.8 bits (351), Expect = 8.3e-30
Identity = 80/139 (57.55%), Postives = 99/139 (71.22%), Query Frame = 0
Query: 4 SPINSQQSHSSSYSPSFLSPKRRSSPELEISDIEMTTLQ--SYTSLKDLLPETPSPPSTK 63
+P + S+ S+SPSFL P E+EISDIEM T+Q +YTSLKDLLP SPP+
Sbjct: 8 NPNPNPNSNHHSHSPSFLLP--NGFGEIEISDIEMITIQTVTYTSLKDLLP--ASPPTIM 67
Query: 64 SPLQNSSWNELPIKNPLVKHAALAYLQPMLRPPEVGDRGFMRMLKK-------HGFGCIE 123
SP QNSSW+E+PIKNPLVKHAALAYLQPM PPEVGD+G +RML++ +G GC
Sbjct: 68 SPTQNSSWHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCLCEGANGVGCFA 127
Query: 124 WLGAVVLAAIGELSGGVRR 134
WLG VVL+ + ++ GGV R
Sbjct: 128 WLGDVVLSGVRDVFGGVCR 142
BLAST of Sgr023770 vs. ExPASy TrEMBL
Match:
A0A6J5YBF2 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51097 PE=4 SV=1)
HSP 1 Score: 139.0 bits (349), Expect = 1.4e-29
Identity = 79/139 (56.83%), Postives = 99/139 (71.22%), Query Frame = 0
Query: 4 SPINSQQSHSSSYSPSFLSPKRRSSPELEISDIEMTTLQ--SYTSLKDLLPETPSPPSTK 63
+P + S+ S+SPSFL P E+EISDIEM T+Q +YTSL+DLLP SPP+
Sbjct: 8 NPHPNPNSNHHSHSPSFLLP--NGFGEIEISDIEMITIQTVTYTSLRDLLP--ASPPTIM 67
Query: 64 SPLQNSSWNELPIKNPLVKHAALAYLQPMLRPPEVGDRGFMRMLK-------KHGFGCIE 123
SP QNSSW+E+PIKNPLVKHAALAYLQPM PPEVGD+G +RML+ ++G GC
Sbjct: 68 SPTQNSSWHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCLCGGENGLGCFA 127
Query: 124 WLGAVVLAAIGELSGGVRR 134
WLG VVL+ + ++ GGV R
Sbjct: 128 WLGDVVLSGVRDVFGGVCR 142
BLAST of Sgr023770 vs. ExPASy TrEMBL
Match:
A0A314Z2H1 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_20094 PE=4 SV=1)
HSP 1 Score: 138.3 bits (347), Expect = 2.4e-29
Identity = 79/139 (56.83%), Postives = 97/139 (69.78%), Query Frame = 0
Query: 4 SPINSQQSHSSSYSPSFLSPKRRSSPELEISDIEMTTLQ--SYTSLKDLLPETPSPPSTK 63
+P S+ S+SPSFL P E+EISDIEM T+Q +YTSLKDLLP SPP+
Sbjct: 8 NPNPDPNSNHHSHSPSFLLP--NGFGEIEISDIEMITIQTVTYTSLKDLLP--ASPPTIM 67
Query: 64 SPLQNSSWNELPIKNPLVKHAALAYLQPMLRPPEVGDRGFMRMLKK-------HGFGCIE 123
SP NSSW+E+PIKNPLVKHAALAYLQPM PPEVGD+G +RML++ +G GC
Sbjct: 68 SPTHNSSWHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCVCGGANGLGCFA 127
Query: 124 WLGAVVLAAIGELSGGVRR 134
WLG VVL+ + ++ GGV R
Sbjct: 128 WLGDVVLSGVRDVCGGVCR 142
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG6571006.1 | 6.9e-39 | 76.67 | hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_007199228.2 | 1.3e-29 | 57.55 | uncharacterized protein LOC18768692 [Prunus persica] >ONH92342.1 hypothetical pr... | [more] |
| XP_034228819.1 | 1.7e-29 | 57.55 | uncharacterized protein LOC117637881 [Prunus dulcis] >VVA15725.1 PREDICTED: MTR_... | [more] |
| CAB4290915.1 | 2.9e-29 | 56.83 | unnamed protein product [Prunus armeniaca] >CAB4321235.1 unnamed protein product... | [more] |
| XP_008236068.1 | 2.9e-29 | 56.83 | PREDICTED: uncharacterized protein LOC103334865 [Prunus mume] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A251MZ17 | 6.4e-30 | 57.55 | Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G169400 PE=4 SV=1 | [more] |
| M5VHF3 | 6.4e-30 | 57.55 | Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa022032m... | [more] |
| A0A5E4EIX6 | 8.3e-30 | 57.55 | PREDICTED: MTR_1g112960 OS=Prunus dulcis OX=3755 GN=ALMOND_2B029195 PE=4 SV=1 | [more] |
| A0A6J5YBF2 | 1.4e-29 | 56.83 | Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51097 PE=4 S... | [more] |
| A0A314Z2H1 | 2.4e-29 | 56.83 | Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_200... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
