Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTATTCTGTGGGAGAAGAGCGAGACATGGCGATGGATAGTCAGGAAAACCAGGGACTCCAAGCCCTTCTTCTTGGCATTCGCCACCGTCTGCGGCGTCGTTCCCGGAGTTATTGGTTACTGCGTCATGCAAGCCACCAATTCCCGCAACGAGCAACTCGAAGCCCGCCTCCGCCAGAATGCAAGACCTGAATCTCTCGTATGCCTCGTTCTCTCTTCTTCCGCTATGTTCGTAAAACTCTATTATTATCTCAATTTTGGGTCGGGAGATCTCCGATTGAGTTTCTTCTATTGAGAAATTTTTGTTCCGTCTGACATTTCGCCCGATCGCTTAAAATTCGACGTCCCGCTCTACTGCGATGAATATATTCGGTTTATTCCATGGACTTACCTGATAATTCGATGGAAAAGTTGGATTTTTTCTTGCTTTCGTTCTTGATCTAGCTGCTCCATTCAAATCTGGTTTCATGGATCAGACTTCTAATTTCCATGGTGTTAGCATTTCAAAGAAATTTTGGCATATAAGTATTCTTTTACACTTGCTTTATTAAAAGAAAAAAACAGACGAAGTAAAACCCTCGTGCTCGTGACATAATTTGCACGTCGTCATTTGAGCTGCATCGAATTTGCTGGCTGGTGCTTTCATTTGTTTCAACACTTCTCTCCATAATATCTTTTCATTAGCTGCTTCCACCTTTTGAGATTTTGGTCATCTAACCACCAATAACTGCTCTTATAAGGCTACATTTTGTGAATTCGTGGGAATGTCGGAACATAAATGTGCCATATTTTATGCAGCAGTAGCTTGAGTAGGTTTAATCTTACAATAAGTTCATCAGGCATTTTGTTTCTCTTATGGATGAATATGTCTGTGGTTTTGTTACTGGACAATGAAATTCAGATGATGGGGAAAGTAAATCGAGAGAGACTGGCAGAATATCTAGGAGAGTTGCAGAGGAAAGAGGACACAAACGATCGCTATGTTGCTGCTTTGAGGGGAGAGACATTGACAAGGAAGCCATATGTGAGAATTCAACCAATCCCAAATCAAAGCAATGACGCCTCCGACAAGGAACAACAGATCAAGAAGGAAAATAAATAA
mRNA sequence
ATGTCTATTCTGTGGGAGAAGAGCGAGACATGGCGATGGATAGTCAGGAAAACCAGGGACTCCAAGCCCTTCTTCTTGGCATTCGCCACCGTCTGCGGCGTCGTTCCCGGAGTTATTGGTTACTGCGTCATGCAAGCCACCAATTCCCGCAACGAGCAACTCGAAGCCCGCCTCCGCCAGAATGCAAGACCTGAATCTCTCGTATGCCTCGTTCTCTCTTCTTCCGCTATCAGTAGCTTGAGTAGGTTTAATCTTACAATAAGTTCATCAGGCATTTTGTTTCTCTTATGGATGAATATGTCTGTGGTTTTGTTACTGGACAATGAAATTCAGATGATGGGGAAAGTAAATCGAGAGAGACTGGCAGAATATCTAGGAGAGTTGCAGAGGAAAGAGGACACAAACGATCGCTATGTTGCTGCTTTGAGGGGAGAGACATTGACAAGGAAGCCATATGTGAGAATTCAACCAATCCCAAATCAAAGCAATGACGCCTCCGACAAGGAACAACAGATCAAGAAGGAAAATAAATAA
Coding sequence (CDS)
ATGTCTATTCTGTGGGAGAAGAGCGAGACATGGCGATGGATAGTCAGGAAAACCAGGGACTCCAAGCCCTTCTTCTTGGCATTCGCCACCGTCTGCGGCGTCGTTCCCGGAGTTATTGGTTACTGCGTCATGCAAGCCACCAATTCCCGCAACGAGCAACTCGAAGCCCGCCTCCGCCAGAATGCAAGACCTGAATCTCTCGTATGCCTCGTTCTCTCTTCTTCCGCTATCAGTAGCTTGAGTAGGTTTAATCTTACAATAAGTTCATCAGGCATTTTGTTTCTCTTATGGATGAATATGTCTGTGGTTTTGTTACTGGACAATGAAATTCAGATGATGGGGAAAGTAAATCGAGAGAGACTGGCAGAATATCTAGGAGAGTTGCAGAGGAAAGAGGACACAAACGATCGCTATGTTGCTGCTTTGAGGGGAGAGACATTGACAAGGAAGCCATATGTGAGAATTCAACCAATCCCAAATCAAAGCAATGACGCCTCCGACAAGGAACAACAGATCAAGAAGGAAAATAAATAA
Protein sequence
MSILWEKSETWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQNARPESLVCLVLSSSAISSLSRFNLTISSSGILFLLWMNMSVVLLLDNEIQMMGKVNRERLAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPNQSNDASDKEQQIKKENK
Homology
BLAST of Sgr023524 vs. NCBI nr
Match:
XP_023007266.1 (uncharacterized protein LOC111499804 [Cucurbita maxima])
HSP 1 Score: 232.3 bits (591), Expect = 3.3e-57
Identity = 124/177 (70.06%), Postives = 130/177 (73.45%), Query Frame = 0
Query: 1 MSILWEKSETWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
MS LWEKSE+WRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ
Sbjct: 1 MSFLWEKSESWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
Query: 61 NARPESLVCLVLSSSAISSLSRFNLTISSSGILFLLWMNMSVVLLLDNEIQMMGKVNRER 120
NARPESL MMG+VNRER
Sbjct: 61 NARPESL--------------------------------------------MMGRVNRER 120
Query: 121 LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPNQSNDASDKEQQIKKENK 178
LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIP+QSN+ +DK QQ+KKENK
Sbjct: 121 LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPSQSNEVADKNQQVKKENK 133
BLAST of Sgr023524 vs. NCBI nr
Match:
XP_022149659.1 (uncharacterized protein LOC111018036 [Momordica charantia])
HSP 1 Score: 231.1 bits (588), Expect = 7.4e-57
Identity = 123/177 (69.49%), Postives = 129/177 (72.88%), Query Frame = 0
Query: 1 MSILWEKSETWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
MS LWEKSETWRW+VRKTRDSKPFF AFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ
Sbjct: 1 MSFLWEKSETWRWVVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
Query: 61 NARPESLVCLVLSSSAISSLSRFNLTISSSGILFLLWMNMSVVLLLDNEIQMMGKVNRER 120
NARPESL MMG+VNRER
Sbjct: 61 NARPESL--------------------------------------------MMGQVNRER 120
Query: 121 LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPNQSNDASDKEQQIKKENK 178
LAEYLGELQRKEDTNDRYVAAL+GETLTRKPYVRIQPIP + NDA+DKEQ+IKKENK
Sbjct: 121 LAEYLGELQRKEDTNDRYVAALKGETLTRKPYVRIQPIPTEGNDAADKEQKIKKENK 133
BLAST of Sgr023524 vs. NCBI nr
Match:
XP_022947349.1 (uncharacterized protein LOC111451237 [Cucurbita moschata])
HSP 1 Score: 229.6 bits (584), Expect = 2.2e-56
Identity = 125/178 (70.22%), Postives = 130/178 (73.03%), Query Frame = 0
Query: 1 MSILWEKSETWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
MS LWEKSE+WRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ
Sbjct: 1 MSFLWEKSESWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
Query: 61 NARPESLVCLVLSSSAISSLSRFNLTISSSGILFLLWMNMSVVLLLDNEIQMMGKVNRER 120
NARPESL MMG+VNRER
Sbjct: 61 NARPESL--------------------------------------------MMGRVNRER 120
Query: 121 LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPI-PNQSNDASDKEQQIKKENK 178
LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPI PNQSN+ +DK QQ+KKENK
Sbjct: 121 LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPPNQSNEVADKNQQVKKENK 134
BLAST of Sgr023524 vs. NCBI nr
Match:
KAG7035319.1 (hypothetical protein SDJN02_02114, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 229.6 bits (584), Expect = 2.2e-56
Identity = 125/178 (70.22%), Postives = 130/178 (73.03%), Query Frame = 0
Query: 1 MSILWEKSETWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
MS LWEKSE+WRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ
Sbjct: 1 MSFLWEKSESWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
Query: 61 NARPESLVCLVLSSSAISSLSRFNLTISSSGILFLLWMNMSVVLLLDNEIQMMGKVNRER 120
NARPESL MMG+VNRER
Sbjct: 61 NARPESL--------------------------------------------MMGRVNRER 120
Query: 121 LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIP-NQSNDASDKEQQIKKENK 178
LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIP NQSN+ +DK QQ+KKENK
Sbjct: 121 LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPTNQSNEVADKNQQVKKENK 134
BLAST of Sgr023524 vs. NCBI nr
Match:
XP_023533278.1 (uncharacterized protein LOC111795217 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 227.6 bits (579), Expect = 8.2e-56
Identity = 124/178 (69.66%), Postives = 129/178 (72.47%), Query Frame = 0
Query: 1 MSILWEKSETWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
MS LWEKSE+WRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ
Sbjct: 1 MSFLWEKSESWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
Query: 61 NARPESLVCLVLSSSAISSLSRFNLTISSSGILFLLWMNMSVVLLLDNEIQMMGKVNRER 120
NARPESL MMG+VNRER
Sbjct: 61 NARPESL--------------------------------------------MMGRVNRER 120
Query: 121 LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPI-PNQSNDASDKEQQIKKENK 178
LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPI PNQSN+ +DK QQ+K ENK
Sbjct: 121 LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPPNQSNEVADKNQQVKNENK 134
BLAST of Sgr023524 vs. ExPASy TrEMBL
Match:
A0A6J1L027 (uncharacterized protein LOC111499804 OS=Cucurbita maxima OX=3661 GN=LOC111499804 PE=4 SV=1)
HSP 1 Score: 232.3 bits (591), Expect = 1.6e-57
Identity = 124/177 (70.06%), Postives = 130/177 (73.45%), Query Frame = 0
Query: 1 MSILWEKSETWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
MS LWEKSE+WRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ
Sbjct: 1 MSFLWEKSESWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
Query: 61 NARPESLVCLVLSSSAISSLSRFNLTISSSGILFLLWMNMSVVLLLDNEIQMMGKVNRER 120
NARPESL MMG+VNRER
Sbjct: 61 NARPESL--------------------------------------------MMGRVNRER 120
Query: 121 LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPNQSNDASDKEQQIKKENK 178
LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIP+QSN+ +DK QQ+KKENK
Sbjct: 121 LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPSQSNEVADKNQQVKKENK 133
BLAST of Sgr023524 vs. ExPASy TrEMBL
Match:
A0A6J1D7P4 (uncharacterized protein LOC111018036 OS=Momordica charantia OX=3673 GN=LOC111018036 PE=4 SV=1)
HSP 1 Score: 231.1 bits (588), Expect = 3.6e-57
Identity = 123/177 (69.49%), Postives = 129/177 (72.88%), Query Frame = 0
Query: 1 MSILWEKSETWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
MS LWEKSETWRW+VRKTRDSKPFF AFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ
Sbjct: 1 MSFLWEKSETWRWVVRKTRDSKPFFFAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
Query: 61 NARPESLVCLVLSSSAISSLSRFNLTISSSGILFLLWMNMSVVLLLDNEIQMMGKVNRER 120
NARPESL MMG+VNRER
Sbjct: 61 NARPESL--------------------------------------------MMGQVNRER 120
Query: 121 LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPNQSNDASDKEQQIKKENK 178
LAEYLGELQRKEDTNDRYVAAL+GETLTRKPYVRIQPIP + NDA+DKEQ+IKKENK
Sbjct: 121 LAEYLGELQRKEDTNDRYVAALKGETLTRKPYVRIQPIPTEGNDAADKEQKIKKENK 133
BLAST of Sgr023524 vs. ExPASy TrEMBL
Match:
A0A6J1G6J1 (uncharacterized protein LOC111451237 OS=Cucurbita moschata OX=3662 GN=LOC111451237 PE=4 SV=1)
HSP 1 Score: 229.6 bits (584), Expect = 1.0e-56
Identity = 125/178 (70.22%), Postives = 130/178 (73.03%), Query Frame = 0
Query: 1 MSILWEKSETWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
MS LWEKSE+WRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ
Sbjct: 1 MSFLWEKSESWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
Query: 61 NARPESLVCLVLSSSAISSLSRFNLTISSSGILFLLWMNMSVVLLLDNEIQMMGKVNRER 120
NARPESL MMG+VNRER
Sbjct: 61 NARPESL--------------------------------------------MMGRVNRER 120
Query: 121 LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPI-PNQSNDASDKEQQIKKENK 178
LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPI PNQSN+ +DK QQ+KKENK
Sbjct: 121 LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPPNQSNEVADKNQQVKKENK 134
BLAST of Sgr023524 vs. ExPASy TrEMBL
Match:
A0A0A0KEE2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G135430 PE=4 SV=1)
HSP 1 Score: 224.2 bits (570), Expect = 4.4e-55
Identity = 121/177 (68.36%), Postives = 127/177 (71.75%), Query Frame = 0
Query: 1 MSILWEKSETWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
MSILWEKSETWRW+VRKTRDSK FF FATVCG+VPG+IGYCVMQATNS NEQLEARLRQ
Sbjct: 1 MSILWEKSETWRWVVRKTRDSKSFFFTFATVCGLVPGLIGYCVMQATNSTNEQLEARLRQ 60
Query: 61 NARPESLVCLVLSSSAISSLSRFNLTISSSGILFLLWMNMSVVLLLDNEIQMMGKVNRER 120
NARPESL MMG+VNRER
Sbjct: 61 NARPESL--------------------------------------------MMGQVNRER 120
Query: 121 LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPNQSNDASDKEQQIKKENK 178
LAEYLGELQRKEDTNDRYVAAL G+TLTRKPYVRIQPIPNQSNDA+ KEQQIKKENK
Sbjct: 121 LAEYLGELQRKEDTNDRYVAALEGKTLTRKPYVRIQPIPNQSNDATVKEQQIKKENK 133
BLAST of Sgr023524 vs. ExPASy TrEMBL
Match:
A0A5A7UJD3 (Transcription factor bHLH14 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G005450 PE=4 SV=1)
HSP 1 Score: 218.8 bits (556), Expect = 1.8e-53
Identity = 119/177 (67.23%), Postives = 125/177 (70.62%), Query Frame = 0
Query: 1 MSILWEKSETWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
MSILWEKSETWRW+VRKTRDSK FF FAT CG+VP +IGYCVMQATNS NEQLEARLRQ
Sbjct: 1 MSILWEKSETWRWLVRKTRDSKSFFFTFATACGLVPCLIGYCVMQATNSTNEQLEARLRQ 60
Query: 61 NARPESLVCLVLSSSAISSLSRFNLTISSSGILFLLWMNMSVVLLLDNEIQMMGKVNRER 120
NARPESL MMG+VNRER
Sbjct: 61 NARPESL--------------------------------------------MMGQVNRER 120
Query: 121 LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPNQSNDASDKEQQIKKENK 178
LAEYLGELQRKEDTNDRYVAAL G+TLTRKPYVRIQPIPNQSNDA+ KEQQIKKENK
Sbjct: 121 LAEYLGELQRKEDTNDRYVAALEGKTLTRKPYVRIQPIPNQSNDATVKEQQIKKENK 133
BLAST of Sgr023524 vs. TAIR 10
Match:
AT1G79390.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 166.4 bits (420), Expect = 2.1e-41
Identity = 89/170 (52.35%), Postives = 107/170 (62.94%), Query Frame = 0
Query: 1 MSILWEKSETWRWIVRKTRDSKPFFLAFATVCGVVPGVIGYCVMQATNSRNEQLEARLRQ 60
MS ++EKS TWRW+V KTRDS+ FF FA +CGV+PGVIGY VMQ TNS N +LEARLR+
Sbjct: 1 MSFMYEKSNTWRWLVMKTRDSRSFFFTFAALCGVIPGVIGYGVMQVTNSSNPELEARLRK 60
Query: 61 NARPESLVCLVLSSSAISSLSRFNLTISSSGILFLLWMNMSVVLLLDNEIQMMGKVNRER 120
+ARP++L MMGKVN+ER
Sbjct: 61 SARPDTL--------------------------------------------MMGKVNQER 120
Query: 121 LAEYLGELQRKEDTNDRYVAALRGETLTRKPYVRIQPIPNQSNDASDKEQ 171
LAEYLGEL++K+DTNDRYVAALRGETLTRKPY RIQP+P + + K Q
Sbjct: 121 LAEYLGELKQKQDTNDRYVAALRGETLTRKPYQRIQPMPKPDDTVTTKTQ 126
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023007266.1 | 3.3e-57 | 70.06 | uncharacterized protein LOC111499804 [Cucurbita maxima] | [more] |
XP_022149659.1 | 7.4e-57 | 69.49 | uncharacterized protein LOC111018036 [Momordica charantia] | [more] |
XP_022947349.1 | 2.2e-56 | 70.22 | uncharacterized protein LOC111451237 [Cucurbita moschata] | [more] |
KAG7035319.1 | 2.2e-56 | 70.22 | hypothetical protein SDJN02_02114, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_023533278.1 | 8.2e-56 | 69.66 | uncharacterized protein LOC111795217 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1L027 | 1.6e-57 | 70.06 | uncharacterized protein LOC111499804 OS=Cucurbita maxima OX=3661 GN=LOC111499804... | [more] |
A0A6J1D7P4 | 3.6e-57 | 69.49 | uncharacterized protein LOC111018036 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A6J1G6J1 | 1.0e-56 | 70.22 | uncharacterized protein LOC111451237 OS=Cucurbita moschata OX=3662 GN=LOC1114512... | [more] |
A0A0A0KEE2 | 4.4e-55 | 68.36 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G135430 PE=4 SV=1 | [more] |
A0A5A7UJD3 | 1.8e-53 | 67.23 | Transcription factor bHLH14 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... | [more] |
Match Name | E-value | Identity | Description | |
AT1G79390.1 | 2.1e-41 | 52.35 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... | [more] |