Sgr023468 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr023468
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	30S ribosomal protein S18
Location	tig00000892: 3563578 .. 3566140 (-)
RNA-Seq Expression	Sgr023468
Synteny	Sgr023468

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGTTTTTCAGTTTAAGATTTCGGGCCTATAGGCCCAAAAAATTTGGAGCTTTTTCGGATGGTTCACATCCGCGGCTCAAGCCCAGCGAGCGAACGTTCTGCTTCACTTGCGTTGCCGCCCTGCGAGGCCCCTTCCCTAACCGGCGGCAGCTGAAGCAGCAACCCTACGGGACTACGTTCCAACTTCATTCAAGCTTTTGCATCAGTGAAGTACTTCTCAGGTTCTGCTAATTTTTCTTTTAGTGCGGAATGAGAACCGTTCAGGTTGCTTTGCGATCCCTTAGTGGTGTCTTATCGCAGAGATTTAAGCAAACCTCTGCGCTCAAAAACCTTTCCACAAACTCCGCTCGTGGTAACTTCCACTTGTTTTCTGAATTTGACTCTATGAATTGCTTGCTTATACTGTGATTGCTGATGTACTTTTAGTTCTTGGTTTGGGTGGAAATTCATCAGGTTTTTTATTTTTCTGAGCTCATTTTGCTCAAATGTGTTTCGATATAGACCTTGCTTGTCCGAATTCTTGAGTGGAGAACCTCATGTTTGGTTTATAATTGTTAATGTATTCCATTCCAAGGCATGTTTTTACATATTTCGTGTTTAAAACTTTAAACAGATAGTGGTTGATGATAAGGGAAAACCCGATTCATTTGAGTCTGCTGATGACTTTGAACGTCGGATATTTGGTGGTGTTTCTTTGGGCGATTCCGGAAACGATGCTTTCTTTGAGAAGCTTGATAGACTTGGCAAGCCTCGTGAAAGAATAGGTTCAAGACTGAGTGGAGCAAACAATTTTCAGGCGTTGTATGGTCTTGATGATAATCTTAACACGTTGTCGGATGGGATGGATGGCAAGTTGAAGAAAGCTGCCACTTATTTTGAGTTTGATCCTGAGGAAATAGCAAAAGATGATTATACTTTCAGAGCAGATATGTCTTTTAAGCCTGGATCGACGTACGAAATCAAGGCACGTAGCAGTGCAACTGGTTGTTTTTATTCTTGTTAAGAACAAACCCAATTATTATTCTTGTCCTAACTTCTATTTATAATTACATTACATCTAAAGAATTCTTCGTACCGGAAATAATCCATGTCTCCTTCAAGAAGCATGCTAGGTGAATTTTATGGCAAACTATGTCCGGATGGTTAGCATTTGATGATATGTGATGGAAATGAACTTTACTGCATTATCATTATAGCTTTCCGTGTCCTTGGTAGAACTGTTACCTCTCTACACCTTACGTAGATGATGTTGTGTACTTAATGCTACTGTTATTCTAAGTACTTTCAGCTTATACAGGATCTGGATCTAACAAAGCCAGGCGTACGTAAACCTCCCAAAAGGGTTGAGTTTCAGGTGACAACGGAGGAGGTCTTAAGAAAAGCTGATTTCAGGGTGAGCATTCCTTAATTTCATGTACCATGCCATTTTACCAATTCCTTCTCAGTTCATTATGGATAGCTAGGACTAGGAGTACACAATATGGTCGGAATTAGTGGTAAAAGACCTTTGGATCCATTGCAAGTTTTCATCTCTCTTAGTCACCTACTTGAATATCTTATGATATGAACTTCTCATCTATTAAGTGTCATAGACTTAAAACAGAAGTTCTTAATATTGAATTAAGTCAATATAAATAGTCTGGAATTTCAAAGTACAAGAAATGATAAGTTGGAGTAGGATTATTTATTGCTGGTTTTCTGCTTAGTTCTATTTAAGAAGTCTGGCTGAGAGTATTCATCTGTATTTTATTGAAACTGTCTATCCTAGAACAAAAGGAACCCTTTCGGTAGAGTTTTGGTCTGTCATCATAAACATGGAGTAGCAAAAGAAGCCATGGACCATCAAAATTGTTTGTATAAGTACGATTAATTAATTCACGAGTTTCTGATATGGGTAGTGAGTGTAATCAGTTATATTTGCGATCAAGAAAGAAAGATCATACAATGGCCTCAAAGAGTTTTAGGACTTTCTTGTTTGCAACATTTGGAAGGTCATGGAATTATCAGTATCATTTTCATTGCCACCAAATGATAGTCTGGCTATAAGTCGGTCTTTGTGGCCATTGAAATTTAGTTCGCGGCTCTCTTGAGGAAGTTTTATAATACAGATTCAGGATACCTTTACAAGCAAAGAATACTTGATGGGAGTTCAATCGCATTTTATCTATCTTACCCCGCTGTAGGCATATCTAACAATGAGCAAATAGTTGTCTGCAGAATGTTAGATTCCTGGCAAACTTTATAACCGAGTCTGGGATCATTATCAAGAGGAGCAAGGTAAATTTTTTGAACAATAATCAGGTTTTGAACAAGTTTAGTCATAAACCTTCATCTTATTTATCACTTCAACAATGTGCAGACAGGTATCAGTGCCAAGGCACAGAGGAAAGTTGCCCGAGAGATCAAAACTGCACGAGCTTTTGGCTTAATGCCTTTCACAACAATGGGAACCAAAACATTTGTTTTTGGGAAAACCATGGAGTATCTTGATAAGGACTATGAGTATGAAGTGTTTGATAATACTGCTGATGCTGATGGAGAACGCCCGCTCAGATCCTAG

mRNA sequence

ATGCCGTTTTTCAGTTTAAGATTTCGGGCCTATAGGCCCAAAAAATTTGGAGCTTTTTCGGATGGTTCACATCCGCGGCTCAAGCCCAGCGAGCGAACGTTCTGCTTCACTTGCGTTGCCGCCCTGCGAGGCCCCTTCCCTAACCGGCGGCAGCTGAAGCAGCAACCCTACGGGACTACGTTCCAACTTCATTCAAGCTTTTGCATCAGTGAAGTACTTCTCAGGTTGCTTTGCGATCCCTTAGTGGTGTCTTATCGCAGAGATTTAAGCAAACCTCTGCGCTCAAAAACCTTTCCACAAACTCCGCTCGTGATAGTGGTTGATGATAAGGGAAAACCCGATTCATTTGAGTCTGCTGATGACTTTGAACGTCGGATATTTGGTGGTGTTTCTTTGGGCGATTCCGGAAACGATGCTTTCTTTGAGAAGCTTGATAGACTTGGCAAGCCTCGTGAAAGAATAGGTTCAAGACTGAGTGGAGCAAACAATTTTCAGGCGTTGTATGGTCTTGATGATAATCTTAACACGTTGTCGGATGGGATGGATGGCAAGTTGAAGAAAGCTGCCACTTATTTTGAGTTTGATCCTGAGGAAATAGCAAAAGATGATTATACTTTCAGAGCAGATATGTCTTTTAAGCCTGGATCGACGTACGAAATCAAGGCACGTAGCAGTGCAACTGGCGTACGTAAACCTCCCAAAAGGGTTGAGTTTCAGGTGACAACGGAGGAGGTCTTAAGAAAAGCTGATTTCAGGAATGTTAGATTCCTGGCAAACTTTATAACCGAGTCTGGGATCATTATCAAGAGGAGCAAGACAGGTATCAGTGCCAAGGCACAGAGGAAAGTTGCCCGAGAGATCAAAACTGCACGAGCTTTTGGCTTAATGCCTTTCACAACAATGGGAACCAAAACATTTGTTTTTGGGAAAACCATGGAGTATCTTGATAAGGACTATGAGTATGAAGTGTTTGATAATACTGCTGATGCTGATGGAGAACGCCCGCTCAGATCCTAG

Coding sequence (CDS)

ATGCCGTTTTTCAGTTTAAGATTTCGGGCCTATAGGCCCAAAAAATTTGGAGCTTTTTCGGATGGTTCACATCCGCGGCTCAAGCCCAGCGAGCGAACGTTCTGCTTCACTTGCGTTGCCGCCCTGCGAGGCCCCTTCCCTAACCGGCGGCAGCTGAAGCAGCAACCCTACGGGACTACGTTCCAACTTCATTCAAGCTTTTGCATCAGTGAAGTACTTCTCAGGTTGCTTTGCGATCCCTTAGTGGTGTCTTATCGCAGAGATTTAAGCAAACCTCTGCGCTCAAAAACCTTTCCACAAACTCCGCTCGTGATAGTGGTTGATGATAAGGGAAAACCCGATTCATTTGAGTCTGCTGATGACTTTGAACGTCGGATATTTGGTGGTGTTTCTTTGGGCGATTCCGGAAACGATGCTTTCTTTGAGAAGCTTGATAGACTTGGCAAGCCTCGTGAAAGAATAGGTTCAAGACTGAGTGGAGCAAACAATTTTCAGGCGTTGTATGGTCTTGATGATAATCTTAACACGTTGTCGGATGGGATGGATGGCAAGTTGAAGAAAGCTGCCACTTATTTTGAGTTTGATCCTGAGGAAATAGCAAAAGATGATTATACTTTCAGAGCAGATATGTCTTTTAAGCCTGGATCGACGTACGAAATCAAGGCACGTAGCAGTGCAACTGGCGTACGTAAACCTCCCAAAAGGGTTGAGTTTCAGGTGACAACGGAGGAGGTCTTAAGAAAAGCTGATTTCAGGAATGTTAGATTCCTGGCAAACTTTATAACCGAGTCTGGGATCATTATCAAGAGGAGCAAGACAGGTATCAGTGCCAAGGCACAGAGGAAAGTTGCCCGAGAGATCAAAACTGCACGAGCTTTTGGCTTAATGCCTTTCACAACAATGGGAACCAAAACATTTGTTTTTGGGAAAACCATGGAGTATCTTGATAAGGACTATGAGTATGAAGTGTTTGATAATACTGCTGATGCTGATGGAGAACGCCCGCTCAGATCCTAG

Protein sequence

MPFFSLRFRAYRPKKFGAFSDGSHPRLKPSERTFCFTCVAALRGPFPNRRQLKQQPYGTTFQLHSSFCISEVLLRLLCDPLVVSYRRDLSKPLRSKTFPQTPLVIVVDDKGKPDSFESADDFERRIFGGVSLGDSGNDAFFEKLDRLGKPRERIGSRLSGANNFQALYGLDDNLNTLSDGMDGKLKKAATYFEFDPEEIAKDDYTFRADMSFKPGSTYEIKARSSATGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITESGIIIKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKTFVFGKTMEYLDKDYEYEVFDNTADADGERPLRS

Homology

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BLAST of Sgr023468 vs. NCBI nr
Match: XP_022947026.1 (uncharacterized protein LOC111451027 isoform X1 [Cucurbita moschata])

HSP 1 Score: 406.8 bits (1044), Expect = 1.9e-109
Identity = 206/229 (89.96%), Postives = 216/229 (94.32%), Query Frame = 0


Query: 108 DDKGKPDSFESADDFERRIFGGVSLGDSGNDAFFEKLDRLGKPRERIGSRLSGANNFQAL 167
           DD+GK +SFESADDFERRIFGGVSLGDSGNDAFFEKLDRLGKPRERIGSRLSG NNFQAL
Sbjct: 39  DDEGKSNSFESADDFERRIFGGVSLGDSGNDAFFEKLDRLGKPRERIGSRLSGGNNFQAL 98

Query: 168 YGLDDNLNTLSDGMDGKLKKAATYFEFDPEEIAKDDYTFRADMSFKPGSTYEIKARS-SA 227
           YG++DNLNTLSDGMDGKLKKA+TYFEFDPEEIAKDDYTFRADMSFKPGSTYEIK    + 
Sbjct: 99  YGIEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYEIKDLDLTK 158

Query: 228 TGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITESGIIIKRSKTGISAKAQRKVARE 287
            GVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFIT++GII KRSKTGISAKAQRKVARE
Sbjct: 159 PGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIINKRSKTGISAKAQRKVARE 218

Query: 288 IKTARAFGLMPFTTMGTKTFVFGKTMEYLDKDYEYEVFDNTADADGERP 336
           IKTARAFGLMPFTTMGTK+FVFGKTMEYLDKDYEYEVF+N  DAD  RP
Sbjct: 219 IKTARAFGLMPFTTMGTKSFVFGKTMEYLDKDYEYEVFENNTDADRGRP 267

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BLAST of Sgr023468 vs. NCBI nr
Match: XP_022148322.1 (uncharacterized protein LOC111017003 [Momordica charantia])

HSP 1 Score: 404.8 bits (1039), Expect = 7.2e-109
Identity = 208/232 (89.66%), Postives = 215/232 (92.67%), Query Frame = 0


Query: 108 DDKGKPDSFESADDFERRIFGGVSLGDSGNDAFFEKLDRLGKPRERIGSRLSGANNFQAL 167
           D+K KPDSFESADDFERRIFGGVSL DSGN+AFFEKLDRLGKPRER+GSRLSG NNFQAL
Sbjct: 40  DEKRKPDSFESADDFERRIFGGVSLDDSGNEAFFEKLDRLGKPRERVGSRLSGGNNFQAL 99

Query: 168 YGLDDNLNTLSDGMDGKLKKAATYFEFDPEEIAKDDYTFRADMSFKPGSTYEIKARS-SA 227
           YGLDD LNTLSDGMDGKLKKAATYFEFDPEEI+KDDYTFRADMSFKPGSTYEIK      
Sbjct: 100 YGLDDYLNTLSDGMDGKLKKAATYFEFDPEEISKDDYTFRADMSFKPGSTYEIKDLDLRK 159

Query: 228 TGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITESGIIIKRSKTGISAKAQRKVARE 287
            GVRKPPKRVEFQVTTEEVL+KADFRNVRFLANFIT++GII KRSKTGISAKAQRKVARE
Sbjct: 160 PGVRKPPKRVEFQVTTEEVLKKADFRNVRFLANFITDAGIINKRSKTGISAKAQRKVARE 219

Query: 288 IKTARAFGLMPFTTMGTKTFVFGKTMEYLDKDYEYEVFDNTADADGERPLRS 339
           IKTARAFGLMPFTTMGTKTFVFGKTME LDKDYEYEVFDNTADAD   PL S
Sbjct: 220 IKTARAFGLMPFTTMGTKTFVFGKTMEDLDKDYEYEVFDNTADADRGHPLGS 271

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BLAST of Sgr023468 vs. NCBI nr
Match: XP_022943865.1 (uncharacterized protein LOC111448465 [Cucurbita moschata])

HSP 1 Score: 402.9 bits (1034), Expect = 2.7e-108
Identity = 207/232 (89.22%), Postives = 215/232 (92.67%), Query Frame = 0


Query: 108 DDKGKPDSFESADDFERRIFGGVSLGDSGNDAFFEKLDRLGKPRERIGSRLSGANNFQAL 167
           DDKGKPDSFESADDFERRIFGGVS GDSGNDAFFEKLDR+GKPRERIGSRLSG NNFQ+L
Sbjct: 39  DDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSL 98

Query: 168 YGLDDNLNTLSDGMDGKLKKAATYFEFDPEEIAKDDYTFRADMSFKPGSTYEIKARS-SA 227
           YGLDDNLNTLSDGMDGKLKKA+TYFEFD EEIAKDDYTFRADMSFKPGSTYE+K    + 
Sbjct: 99  YGLDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTK 158

Query: 228 TGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITESGIIIKRSKTGISAKAQRKVARE 287
            GVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFIT++GIIIKRSKT ISAKAQRKVARE
Sbjct: 159 PGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVARE 218

Query: 288 IKTARAFGLMPFTTMGTKTFVFGKTMEYLDKDYEYEVFDNTADADGERPLRS 339
           IKTARAFGLMPFTTMGTK+FVFGKTME LDKDYEYEVFDN    DGE PL S
Sbjct: 219 IKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNN---DGEHPLGS 267

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BLAST of Sgr023468 vs. NCBI nr
Match: KAG6570652.1 (hypothetical protein SDJN03_29567, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 402.5 bits (1033), Expect = 3.5e-108
Identity = 207/232 (89.22%), Postives = 215/232 (92.67%), Query Frame = 0


Query: 108 DDKGKPDSFESADDFERRIFGGVSLGDSGNDAFFEKLDRLGKPRERIGSRLSGANNFQAL 167
           DDKGKPDSFESADDFERRIFGGVS GD GNDAFFEKLDR+GKPRERIGSRLSG NNFQ+L
Sbjct: 39  DDKGKPDSFESADDFERRIFGGVSTGDYGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSL 98

Query: 168 YGLDDNLNTLSDGMDGKLKKAATYFEFDPEEIAKDDYTFRADMSFKPGSTYEIKARS-SA 227
           YGLDDNLNTLSDGMDGKLKKA+TYFEFD EEIAKDDYTFRADMSFKPGSTYE+K    + 
Sbjct: 99  YGLDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTK 158

Query: 228 TGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITESGIIIKRSKTGISAKAQRKVARE 287
            GVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFIT++GIIIKRSKT ISAKAQRKVARE
Sbjct: 159 PGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVARE 218

Query: 288 IKTARAFGLMPFTTMGTKTFVFGKTMEYLDKDYEYEVFDNTADADGERPLRS 339
           IKTARAFGLMPFTTMGTK+FVFGKTME LDKDYEYEVFDN    DGERPL S
Sbjct: 219 IKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNN---DGERPLGS 267

[Close]

BLAST of Sgr023468 vs. NCBI nr
Match: XP_022986919.1 (uncharacterized protein LOC111484513 [Cucurbita maxima])

HSP 1 Score: 402.5 bits (1033), Expect = 3.5e-108
Identity = 209/232 (90.09%), Postives = 214/232 (92.24%), Query Frame = 0


Query: 108 DDKGKPDSFESADDFERRIFGGVSLGDSGNDAFFEKLDRLGKPRERIGSRLSGANNFQAL 167
           DDKGKPDSFESADDFERRIFGGVS GDSGNDAFFEKLDRLGKPRERIGSRLSG NNFQAL
Sbjct: 39  DDKGKPDSFESADDFERRIFGGVSAGDSGNDAFFEKLDRLGKPRERIGSRLSGGNNFQAL 98

Query: 168 YGLDDNLNTLSDGMDGKLKKAATYFEFDPEEIAKDDYTFRADMSFKPGSTYEIKARS-SA 227
           YGLDDNLNTLSDGMDGKLKKA+TYFEFD EEIAKDDYTFRADMSFKPGSTYEIK    + 
Sbjct: 99  YGLDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEIKDLDLTK 158

Query: 228 TGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITESGIIIKRSKTGISAKAQRKVARE 287
            GVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFIT++GIIIKRSKT ISAKAQRKVARE
Sbjct: 159 PGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVARE 218

Query: 288 IKTARAFGLMPFTTMGTKTFVFGKTMEYLDKDYEYEVFDNTADADGERPLRS 339
           IKTARAFGLMPFTTMGTK+FVFGKTME LDKDYEYEVFDN    DG  PL S
Sbjct: 219 IKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNN---DGGHPLGS 267

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BLAST of Sgr023468 vs. ExPASy Swiss-Prot
Match: P62659 (30S ribosomal protein S18 OS=Thermus thermophilus (strain ATCC BAA-163 / DSM 7039 / HB27) OX=262724 GN=rpsR PE=1 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 9.7e-08
Identity = 35/84 (41.67%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 216 STYEIKARSSATGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITESGIIIKRSKTGI 275
           ST   K +  A   R+P ++ + + T  E     D+RNV  L  F++E+G I+ R +TG+
Sbjct: 2   STKNAKPKKEAQ--RRPSRKAKVKATLGE-FDLRDYRNVEVLKRFLSETGKILPRRRTGL 61

Query: 276 SAKAQRKVAREIKTARAFGLMPFT 300
           SAK QR +A+ IK AR  GL+PFT
Sbjct: 62  SAKEQRILAKTIKRARILGLLPFT 82

[Close]

BLAST of Sgr023468 vs. ExPASy Swiss-Prot
Match: Q5SLQ0 (30S ribosomal protein S18 OS=Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) OX=300852 GN=rpsR PE=1 SV=3)

HSP 1 Score: 59.3 bits (142), Expect = 9.7e-08
Identity = 35/84 (41.67%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 216 STYEIKARSSATGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITESGIIIKRSKTGI 275
           ST   K +  A   R+P ++ + + T  E     D+RNV  L  F++E+G I+ R +TG+
Sbjct: 2   STKNAKPKKEAQ--RRPSRKAKVKATLGE-FDLRDYRNVEVLKRFLSETGKILPRRRTGL 61

Query: 276 SAKAQRKVAREIKTARAFGLMPFT 300
           SAK QR +A+ IK AR  GL+PFT
Sbjct: 62  SAKEQRILAKTIKRARILGLLPFT 82

[Close]

BLAST of Sgr023468 vs. ExPASy Swiss-Prot
Match: P80382 (30S ribosomal protein S18 OS=Thermus thermophilus OX=274 GN=rpsR PE=1 SV=3)

HSP 1 Score: 57.8 bits (138), Expect = 2.8e-07
Identity = 34/84 (40.48%), Postives = 50/84 (59.52%), Query Frame = 0


Query: 216 STYEIKARSSATGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITESGIIIKRSKTGI 275
           ST   K +  A   R+P ++ + + T  E     D+RNV  L  F++E+G I+ R +TG+
Sbjct: 2   STKNAKPKKEAQ--RRPSRKAKVKATLGE-FDLRDYRNVEVLKRFLSETGKILPRRRTGL 61

Query: 276 SAKAQRKVAREIKTARAFGLMPFT 300
           S K QR +A+ IK AR  GL+PFT
Sbjct: 62  SGKEQRILAKTIKRARILGLLPFT 82

[Close]

BLAST of Sgr023468 vs. ExPASy Swiss-Prot
Match: Q9RY50 (30S ribosomal protein S18 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) OX=243230 GN=rpsR PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.1e-06
Identity = 30/85 (35.29%), Postives = 51/85 (60.00%), Query Frame = 0


Query: 215 GSTYEIKARSSATGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITESGIIIKRSKTG 274
           G++ E K R       + PK   F +   E+    D+++V+ L  F++++G I+ R +TG
Sbjct: 5   GNSGERKPRGKGPKRPRKPKVDPFSIGELEI---TDYKDVKMLRRFVSDTGKILPRRRTG 64

Query: 275 ISAKAQRKVAREIKTARAFGLMPFT 300
           +SAK QR++A+ IK AR   L+P+T
Sbjct: 65  LSAKHQRRIAQTIKVARQLALLPYT 86

[Close]

BLAST of Sgr023468 vs. ExPASy Swiss-Prot
Match: P59502 (30S ribosomal protein S18 OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) OX=224915 GN=rpsR PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 4.1e-06
Identity = 28/66 (42.42%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 234 KRVEFQVTTEEVLRKADFRNVRFLANFITESGIIIKRSKTGISAKAQRKVAREIKTARAF 293
           +R +F   T E +++ D++++  L N+ITESG I+    TG SA+ QR++AR IK AR  
Sbjct: 6   RRRKFCRFTVEKIKEIDYKDLSMLKNYITESGKIVPSRITGTSARYQRQLARAIKRARYL 65

Query: 294 GLMPFT 300
            L+P+T
Sbjct: 66  SLLPYT 71

[Close]

BLAST of Sgr023468 vs. ExPASy TrEMBL
Match: A0A6J1G586 (uncharacterized protein LOC111451027 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451027 PE=3 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 9.1e-110
Identity = 206/229 (89.96%), Postives = 216/229 (94.32%), Query Frame = 0


Query: 108 DDKGKPDSFESADDFERRIFGGVSLGDSGNDAFFEKLDRLGKPRERIGSRLSGANNFQAL 167
           DD+GK +SFESADDFERRIFGGVSLGDSGNDAFFEKLDRLGKPRERIGSRLSG NNFQAL
Sbjct: 39  DDEGKSNSFESADDFERRIFGGVSLGDSGNDAFFEKLDRLGKPRERIGSRLSGGNNFQAL 98

Query: 168 YGLDDNLNTLSDGMDGKLKKAATYFEFDPEEIAKDDYTFRADMSFKPGSTYEIKARS-SA 227
           YG++DNLNTLSDGMDGKLKKA+TYFEFDPEEIAKDDYTFRADMSFKPGSTYEIK    + 
Sbjct: 99  YGIEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYEIKDLDLTK 158

Query: 228 TGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITESGIIIKRSKTGISAKAQRKVARE 287
            GVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFIT++GII KRSKTGISAKAQRKVARE
Sbjct: 159 PGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIINKRSKTGISAKAQRKVARE 218

Query: 288 IKTARAFGLMPFTTMGTKTFVFGKTMEYLDKDYEYEVFDNTADADGERP 336
           IKTARAFGLMPFTTMGTK+FVFGKTMEYLDKDYEYEVF+N  DAD  RP
Sbjct: 219 IKTARAFGLMPFTTMGTKSFVFGKTMEYLDKDYEYEVFENNTDADRGRP 267

[Close]

BLAST of Sgr023468 vs. ExPASy TrEMBL
Match: A0A6J1D4R9 (uncharacterized protein LOC111017003 OS=Momordica charantia OX=3673 GN=LOC111017003 PE=3 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 3.5e-109
Identity = 208/232 (89.66%), Postives = 215/232 (92.67%), Query Frame = 0


Query: 108 DDKGKPDSFESADDFERRIFGGVSLGDSGNDAFFEKLDRLGKPRERIGSRLSGANNFQAL 167
           D+K KPDSFESADDFERRIFGGVSL DSGN+AFFEKLDRLGKPRER+GSRLSG NNFQAL
Sbjct: 40  DEKRKPDSFESADDFERRIFGGVSLDDSGNEAFFEKLDRLGKPRERVGSRLSGGNNFQAL 99

Query: 168 YGLDDNLNTLSDGMDGKLKKAATYFEFDPEEIAKDDYTFRADMSFKPGSTYEIKARS-SA 227
           YGLDD LNTLSDGMDGKLKKAATYFEFDPEEI+KDDYTFRADMSFKPGSTYEIK      
Sbjct: 100 YGLDDYLNTLSDGMDGKLKKAATYFEFDPEEISKDDYTFRADMSFKPGSTYEIKDLDLRK 159

Query: 228 TGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITESGIIIKRSKTGISAKAQRKVARE 287
            GVRKPPKRVEFQVTTEEVL+KADFRNVRFLANFIT++GII KRSKTGISAKAQRKVARE
Sbjct: 160 PGVRKPPKRVEFQVTTEEVLKKADFRNVRFLANFITDAGIINKRSKTGISAKAQRKVARE 219

Query: 288 IKTARAFGLMPFTTMGTKTFVFGKTMEYLDKDYEYEVFDNTADADGERPLRS 339
           IKTARAFGLMPFTTMGTKTFVFGKTME LDKDYEYEVFDNTADAD   PL S
Sbjct: 220 IKTARAFGLMPFTTMGTKTFVFGKTMEDLDKDYEYEVFDNTADADRGHPLGS 271

[Close]

BLAST of Sgr023468 vs. ExPASy TrEMBL
Match: A0A6J1FYC1 (uncharacterized protein LOC111448465 OS=Cucurbita moschata OX=3662 GN=LOC111448465 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 1.3e-108
Identity = 207/232 (89.22%), Postives = 215/232 (92.67%), Query Frame = 0


Query: 108 DDKGKPDSFESADDFERRIFGGVSLGDSGNDAFFEKLDRLGKPRERIGSRLSGANNFQAL 167
           DDKGKPDSFESADDFERRIFGGVS GDSGNDAFFEKLDR+GKPRERIGSRLSG NNFQ+L
Sbjct: 39  DDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSL 98

Query: 168 YGLDDNLNTLSDGMDGKLKKAATYFEFDPEEIAKDDYTFRADMSFKPGSTYEIKARS-SA 227
           YGLDDNLNTLSDGMDGKLKKA+TYFEFD EEIAKDDYTFRADMSFKPGSTYE+K    + 
Sbjct: 99  YGLDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEVKDLDLTK 158

Query: 228 TGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITESGIIIKRSKTGISAKAQRKVARE 287
            GVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFIT++GIIIKRSKT ISAKAQRKVARE
Sbjct: 159 PGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVARE 218

Query: 288 IKTARAFGLMPFTTMGTKTFVFGKTMEYLDKDYEYEVFDNTADADGERPLRS 339
           IKTARAFGLMPFTTMGTK+FVFGKTME LDKDYEYEVFDN    DGE PL S
Sbjct: 219 IKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNN---DGEHPLGS 267

[Close]

BLAST of Sgr023468 vs. ExPASy TrEMBL
Match: A0A6J1JHF0 (uncharacterized protein LOC111484513 OS=Cucurbita maxima OX=3661 GN=LOC111484513 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.7e-108
Identity = 209/232 (90.09%), Postives = 214/232 (92.24%), Query Frame = 0


Query: 108 DDKGKPDSFESADDFERRIFGGVSLGDSGNDAFFEKLDRLGKPRERIGSRLSGANNFQAL 167
           DDKGKPDSFESADDFERRIFGGVS GDSGNDAFFEKLDRLGKPRERIGSRLSG NNFQAL
Sbjct: 39  DDKGKPDSFESADDFERRIFGGVSAGDSGNDAFFEKLDRLGKPRERIGSRLSGGNNFQAL 98

Query: 168 YGLDDNLNTLSDGMDGKLKKAATYFEFDPEEIAKDDYTFRADMSFKPGSTYEIKARS-SA 227
           YGLDDNLNTLSDGMDGKLKKA+TYFEFD EEIAKDDYTFRADMSFKPGSTYEIK    + 
Sbjct: 99  YGLDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEIKDLDLTK 158

Query: 228 TGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITESGIIIKRSKTGISAKAQRKVARE 287
            GVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFIT++GIIIKRSKT ISAKAQRKVARE
Sbjct: 159 PGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVARE 218

Query: 288 IKTARAFGLMPFTTMGTKTFVFGKTMEYLDKDYEYEVFDNTADADGERPLRS 339
           IKTARAFGLMPFTTMGTK+FVFGKTME LDKDYEYEVFDN    DG  PL S
Sbjct: 219 IKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEVFDNN---DGGHPLGS 267

[Close]

BLAST of Sgr023468 vs. ExPASy TrEMBL
Match: A0A6J1KYL3 (LOW QUALITY PROTEIN: uncharacterized protein LOC111499912 OS=Cucurbita maxima OX=3661 GN=LOC111499912 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 8.0e-106
Identity = 201/229 (87.77%), Postives = 211/229 (92.14%), Query Frame = 0


Query: 108 DDKGKPDSFESADDFERRIFGGVSLGDSGNDAFFEKLDRLGKPRERIGSRLSGANNFQAL 167
           DD+GK +SFESADDFERRIFGGVSLGDSGNDAFFEKLDRLGKPRERIGSRLSG NNFQAL
Sbjct: 36  DDEGKSNSFESADDFERRIFGGVSLGDSGNDAFFEKLDRLGKPRERIGSRLSGGNNFQAL 95

Query: 168 YGLDDNLNTLSDGMDGKLKKAATYFEFDPEEIAKDDYTFRADMSFKPGSTYEIKARS-SA 227
           YG++DNLNTLSDGMDGKLKKA+TYFEFDPEEIAKDDYTFRADMSFKPGSTYEIK    + 
Sbjct: 96  YGIEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYEIKDLDLTK 155

Query: 228 TGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITESGIIIKRSKTGISAKAQRKVARE 287
            GVRK PKRVEF V TEEVLR ADFRNVRFLANFIT++GII KRSKTGISAKAQRKVARE
Sbjct: 156 PGVRKLPKRVEFXVMTEEVLRXADFRNVRFLANFITDAGIINKRSKTGISAKAQRKVARE 215

Query: 288 IKTARAFGLMPFTTMGTKTFVFGKTMEYLDKDYEYEVFDNTADADGERP 336
           IKTARAFGLMP TTMGTK+FVFGKTMEYLDKDYEYEVF+N  DAD  RP
Sbjct: 216 IKTARAFGLMPLTTMGTKSFVFGKTMEYLDKDYEYEVFENNTDADRGRP 264

[Close]

BLAST of Sgr023468 vs. TAIR 10
Match: AT1G07210.1 (Ribosomal protein S18 )

HSP 1 Score: 181.8 bits (460), Expect = 9.2e-46
Identity = 111/231 (48.05%), Postives = 144/231 (62.34%), Query Frame = 0


Query: 108 DDKGKPDSFESADDFERRIFGGVSLGDSGNDAFFEKLDRLGKPRERI-------GSRLSG 167
           D      SF+S+D+ +  +FG  +  D  ++ FF+ L +  K +          GSR SG
Sbjct: 35  DPNQNRSSFDSSDNLD-SLFGDYTGNDEKSNDFFQHLSKAEKDKRDFNGYNRSGGSRYSG 94

Query: 168 ANNFQALYGLDDNLNTLSDGMDGKLKKAATYFEFDPEEIAKDDYTFRADMSFKPGSTYEI 227
             +       D+  +  SDG+DGKLK+AA  +  D  +  K +Y+FR D +   G     
Sbjct: 95  GGSMSK----DETFDPSSDGVDGKLKEAALAYNMDEGDGFK-EYSFRPDFNNSWGMNNFP 154

Query: 228 KARSSATGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITESGIIIKRSKTGISAKAQ 287
           + +      R+   + E  VTTEEVL+ ADFRNVRFLANFITE+GIIIKR +TGISAKAQ
Sbjct: 155 RMQKQMQNPRQNNSKSE--VTTEEVLKNADFRNVRFLANFITEAGIIIKRKQTGISAKAQ 214

Query: 288 RKVAREIKTARAFGLMPFTTMGTKTFVFGKTMEYLDKDYEYEVFDNTADAD 332
           RK+AREIKTARAFGLMPFTTMGTK F FGKTME  D+D+EYEV D+  + D
Sbjct: 215 RKIAREIKTARAFGLMPFTTMGTKAFQFGKTMENRDQDFEYEVLDDDDEFD 257

The following BLAST results are available for this feature:

BLAST of Sgr023468 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947026.1	1.9e-109	89.96	uncharacterized protein LOC111451027 isoform X1 [Cucurbita moschata]	[more]
XP_022148322.1	7.2e-109	89.66	uncharacterized protein LOC111017003 [Momordica charantia]	[more]
XP_022943865.1	2.7e-108	89.22	uncharacterized protein LOC111448465 [Cucurbita moschata]	[more]
KAG6570652.1	3.5e-108	89.22	hypothetical protein SDJN03_29567, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022986919.1	3.5e-108	90.09	uncharacterized protein LOC111484513 [Cucurbita maxima]	[more]

BLAST of Sgr023468 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P62659	9.7e-08	41.67	30S ribosomal protein S18 OS=Thermus thermophilus (strain ATCC BAA-163 / DSM 703...	[more]
Q5SLQ0	9.7e-08	41.67	30S ribosomal protein S18 OS=Thermus thermophilus (strain ATCC 27634 / DSM 579 /...	[more]
P80382	2.8e-07	40.48	30S ribosomal protein S18 OS=Thermus thermophilus OX=274 GN=rpsR PE=1 SV=3	[more]
Q9RY50	1.1e-06	35.29	30S ribosomal protein S18 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20...	[more]
P59502	4.1e-06	42.42	30S ribosomal protein S18 OS=Buchnera aphidicola subsp. Baizongia pistaciae (str...	[more]

BLAST of Sgr023468 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G586	9.1e-110	89.96	uncharacterized protein LOC111451027 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1D4R9	3.5e-109	89.66	uncharacterized protein LOC111017003 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1FYC1	1.3e-108	89.22	uncharacterized protein LOC111448465 OS=Cucurbita moschata OX=3662 GN=LOC1114484...	[more]
A0A6J1JHF0	1.7e-108	90.09	uncharacterized protein LOC111484513 OS=Cucurbita maxima OX=3661 GN=LOC111484513...	[more]
A0A6J1KYL3	8.0e-106	87.77	LOW QUALITY PROTEIN: uncharacterized protein LOC111499912 OS=Cucurbita maxima OX...	[more]

BLAST of Sgr023468 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07210.1	9.2e-46	48.05	Ribosomal protein S18	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001648	Ribosomal protein S18	PRINTS	PR00974	RIBOSOMALS18	coord: 288..298 score: 52.07 coord: 274..288 score: 42.42 coord: 256..266 score: 40.22
IPR001648	Ribosomal protein S18	PFAM	PF01084	Ribosomal_S18	coord: 249..296 e-value: 6.4E-17 score: 61.5
IPR001648	Ribosomal protein S18	TIGRFAM	TIGR00165	TIGR00165	coord: 242..299 e-value: 1.9E-12 score: 45.2
IPR001648	Ribosomal protein S18	PANTHER	PTHR13479	30S RIBOSOMAL PROTEIN S18	coord: 85..331
IPR001648	Ribosomal protein S18	HAMAP	MF_00270	Ribosomal_S18	coord: 226..301 score: 15.517075
IPR036870	Ribosomal protein S18 superfamily	GENE3D	4.10.640.10	Ribosomal protein S18	coord: 236..301 e-value: 3.5E-20 score: 73.5
IPR036870	Ribosomal protein S18 superfamily	SUPERFAMILY	46911	Ribosomal protein S18	coord: 230..299
None	No IPR available	PANTHER	PTHR13479:SF40	28S RIBOSOMAL PROTEIN S18C, MITOCHONDRIAL	coord: 85..331

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr023468.1	Sgr023468.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0070181	small ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome