Sgr023396 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr023396
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	NOT2 / NOT3 / NOT5 family
Location	tig00000892: 2950452 .. 2952976 (+)
RNA-Seq Expression	Sgr023396
Synteny	Sgr023396

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGGTAATTCTTATCCTAGTGCTGGAGGTCCACTTTCCCAGAACCATTTACAGAGTGTGAGTAGTCTGAGTTCTCTGGGAATGTTGAATGATGTGAACTCCAGTGACAATTCTCCTTTTGACATCAATGATTTTCCTCAGTTGAGTAGTCGTCCAAGTTCTGCAGGAGGGCCTCAAGGACAATTAAGTTAGTAACTAGACATTGTGGGTTTTTTTTTCATAATTTTAAAATTTTTTTTTACTCTGCACCAATTTTGACCTTTAGGGATGTCATGTAATTGTTTCAGGTTCACTGAGAAAGCAAGGCCTTAGTCCTATTGTCCAACAAAACCAAGAATTCAGCATTCAGAATGAAGATTTTCCAGCGTTACCTAGATTTAAAGGTGCAAATCCCTTCTTTGCTTCCAGTAGGTTGCACTAATGTAAATCATAAGCCATAATTTTGGTTGCTACTCTCTACTCTAATCTTTTACAAAAAGTTCTTTTTCAAGAATAAATACAGTAACTTTGGAGAACTATTGTTTGGAAATGCCCTAGTTGATCATGAGTTGTAGCTGAATAGATCAAGTAGAATTTCAGATTTCGTTAGTCAAGTAGGCCATTGCAGTTATTAAGCTCAGGTGCTACTTCATGGAGAGTTCTGAATTGTTTTTCTGTTATCTGCTTGGATTGTAAATTCATCTCATCATAACACACATTAATCTTTTGCTTGCTTAAAATATAAAACGGGACACTTTCTATCATTGATTGTAGTTCTAGATCTTGTGCAGGTGGCAATGCTGATTATGGTATGGATATTCATCAGAAAGACCAACATGAAAATTCTGTGCCTATGATGCAGTCTCAGCAGTTCTCTGTGGGAACTCTTTCTTTTTCTTCTTTTTTTTTATTAGTTGCTACTTTTTACTCGTTTTTCTGCTGACTATCTTCATTTGGTTACAGGCTACTAATAATTTTTTCGATCTTCAGATTGGAAGGTCTGCTGGATTTAACTTAGGGAGCACATATTCACATCGACCCCAGCAGCAGCAACAGCATTCTCCAGCAGCAGTTAGTAACAGCACGGTTCCTTTTCACCTGCAAATAATCAGGATCTTCTCCATCTACACGGATCAGATATATTCCCATCTTCACATGCTGCATCCTATCACCAGCAGGTGGGAAGTAAAAATTTGTACACCTCCTATTTAAGTTCTTACTTTGCAGGCATAAGGAATCAACCTATTGCTCCATTTAGATTTTTTTCTTTTTTGGGTGTCTTATCAATTGAAATGCAGTTTCAACAACCCTTTGAGGTCAATTGATCCCATGTGTTAATAAGAATTTAACGGGTTTAAATGTTTTGTAGATCAATTAGTAGGTTACGTCTTAAATGTCATCTCCATTGAAGTTTTTCAATAATTTGACATTTCCTTGTTCTTTTCAGTCTAGTGGGCCTCCTGGTATTGGTTTAAGACCTCTGAACTCTCCTAATTCAGCTTCTGGAATGGGTTATGACCAACTTATCCAGCAGTATCAGCAGCATCATGGTCAATCCCAGTTCCGATTGCAACATATGTCTGGTGTTAGCCAGTCATTTAGGGATCAGGGCATGAAATCTATGCAGACGCTCAATCTTCTCCTGATCCATTTGGTTTACTTGGTTTGTTAAGTGTAATAAGGTTGAGTGATTCTGATCTTGCATCCCTTGCACTCGGAATTGATTTGACAACGTTAGGATTAAATTTGAATTCAGCAGATAATCTTCACAAGACTTTTGGTTCCCCATGGTCTGATGAGCCTGCTAAGGGTGATCCAGATTTCAATGTACCTCAGTGTTATCTTATTAAACCACCACCTACGCTACATGTGAGGTTCTTCAACTTTCCTCCCTCTCCCAGTCTATGTGAAGCTTCCTACAGTTTCTTCCTAACTGATCCTTTTTTGGGTGACTGCAGCAAGGTTACTTTTCAAAATTCACTCTGGAGACACTGTTTTATATATTTTACAGGTGTGGTATTATTATAAATAATTTTATGTTTAACTTATTATTTTTGTTATATATATAATTCTGCTACCGTCTTGTTCTGCAGCATGCCAAAAGATGAAGCTCAGTTGTATGCTGCTAATGAACTGTAAGCTCTTATTATTGACTTACTGTGCCGCTTGTTATTTTCACCTTAGTCATAAAAGTAATTTATGTGTAAACTTTTCCTAAGAGCTGGGTGCCAACGTTTTTTTTTGGGTAGTTATAATAGAGGCTGGTTTTATCACAAAGAACATCGATTATGGTTCATTCGGGTCTCTAACATGGAACCACTTGTGAAGACAACCACTTACGAGAGAGGATCGTATCTTTGTTTCGACCCCCACACATTTGAAACTGTCCGCAAGGTTTGGACTTGTCAATAATTTTCATTGAAATTCTTTATACAACTGTTGTCCCATTCCATTGCTGATGTTACTATGTCAATTGGCTTCAGGATAATTTCGTCCTCCACTACGAGTTGTTAGAAAAGAGACCAGCTCTACCGCAACATTAA

mRNA sequence

ATGTTGGGTAATTCTTATCCTAGTGCTGGAGGTCCACTTTCCCAGAACCATTTACAGAGTGTGAGTAGTCTGAGTTCTCTGGGAATGTTGAATGATGTGAACTCCAGTGACAATTCTCCTTTTGACATCAATGATTTTCCTCAGTTGAGTAGTCGTCCAAGTTCACTGAGAAAGCAAGGCCTTAGTCCTATTGTCCAACAAAACCAAGAATTCAGCATTCAGAATGAAGATTTTCCAGCGTTACCTAGATTTAAAGGTGGCAATGCTGATTATGGTATGGATATTCATCAGAAAGACCAACATGAAAATTCTGTGCCTATGATGCAGTCTCAGCAGTTCTCTGCTACTAATAATTTTTTCGATCTTCAGATTGGAAGGTCTGCTGGATTTAACTTAGGGAGCACATATTCACATCGACCCCAGCAGCAGCAACAGCATTCTCCAGCAGCAGTTAGTAACAGCACGGTTCCTTTTCACCTGCAAATAATCAGGATCTTCTCCATCTACACGGATCAGATATATTCCCATCTTCACATGCTGCATCCTATCACCAGCAGTGGGCCTCCTGGTATTGGTTTAAGACCTCTGAACTCTCCTAATTCAGCTTCTGGAATGGGTTATGACCAACTTATCCAGCAGTATCAGCAGCATCATGGTCAATCCCAGTTCCGATTGCAACATATGTCTGACGCTCAATCTTCTCCTGATCCATTTGGTTTACTTGGTTTGTTAAGTGTAATAAGGTTGAGTGATTCTGATCTTGCATCCCTTGCACTCGGAATTGATTTGACAACGTTAGGATTAAATTTGAATTCAGCAGATAATCTTCACAAGACTTTTGGTTCCCCATGGTCTGATGAGCCTGCTAAGGGTGATCCAGATTTCAATGTACCTCAGTGTTATCTTATTAAACCACCACCTACGCTACATGTGAGCATGCCAAAAGATGAAGCTCAGTTGTATGCTGCTAATGAACTTTATAATAGAGGCTGGTTTTATCACAAAGAACATCGATTATGGTTCATTCGGGTCTCTAACATGGAACCACTTGTGAAGACAACCACTTACGAGAGAGGATCGTATCTTTGTTTCGACCCCCACACATTTGAAACTGTCCGCAAGGATAATTTCGTCCTCCACTACGAGTTGTTAGAAAAGAGACCAGCTCTACCGCAACATTAA

Coding sequence (CDS)

ATGTTGGGTAATTCTTATCCTAGTGCTGGAGGTCCACTTTCCCAGAACCATTTACAGAGTGTGAGTAGTCTGAGTTCTCTGGGAATGTTGAATGATGTGAACTCCAGTGACAATTCTCCTTTTGACATCAATGATTTTCCTCAGTTGAGTAGTCGTCCAAGTTCACTGAGAAAGCAAGGCCTTAGTCCTATTGTCCAACAAAACCAAGAATTCAGCATTCAGAATGAAGATTTTCCAGCGTTACCTAGATTTAAAGGTGGCAATGCTGATTATGGTATGGATATTCATCAGAAAGACCAACATGAAAATTCTGTGCCTATGATGCAGTCTCAGCAGTTCTCTGCTACTAATAATTTTTTCGATCTTCAGATTGGAAGGTCTGCTGGATTTAACTTAGGGAGCACATATTCACATCGACCCCAGCAGCAGCAACAGCATTCTCCAGCAGCAGTTAGTAACAGCACGGTTCCTTTTCACCTGCAAATAATCAGGATCTTCTCCATCTACACGGATCAGATATATTCCCATCTTCACATGCTGCATCCTATCACCAGCAGTGGGCCTCCTGGTATTGGTTTAAGACCTCTGAACTCTCCTAATTCAGCTTCTGGAATGGGTTATGACCAACTTATCCAGCAGTATCAGCAGCATCATGGTCAATCCCAGTTCCGATTGCAACATATGTCTGACGCTCAATCTTCTCCTGATCCATTTGGTTTACTTGGTTTGTTAAGTGTAATAAGGTTGAGTGATTCTGATCTTGCATCCCTTGCACTCGGAATTGATTTGACAACGTTAGGATTAAATTTGAATTCAGCAGATAATCTTCACAAGACTTTTGGTTCCCCATGGTCTGATGAGCCTGCTAAGGGTGATCCAGATTTCAATGTACCTCAGTGTTATCTTATTAAACCACCACCTACGCTACATGTGAGCATGCCAAAAGATGAAGCTCAGTTGTATGCTGCTAATGAACTTTATAATAGAGGCTGGTTTTATCACAAAGAACATCGATTATGGTTCATTCGGGTCTCTAACATGGAACCACTTGTGAAGACAACCACTTACGAGAGAGGATCGTATCTTTGTTTCGACCCCCACACATTTGAAACTGTCCGCAAGGATAATTTCGTCCTCCACTACGAGTTGTTAGAAAAGAGACCAGCTCTACCGCAACATTAA

Protein sequence

MLGNSYPSAGGPLSQNHLQSVSSLSSLGMLNDVNSSDNSPFDINDFPQLSSRPSSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQKDQHENSVPMMQSQQFSATNNFFDLQIGRSAGFNLGSTYSHRPQQQQQHSPAAVSNSTVPFHLQIIRIFSIYTDQIYSHLHMLHPITSSGPPGIGLRPLNSPNSASGMGYDQLIQQYQQHHGQSQFRLQHMSDAQSSPDPFGLLGLLSVIRLSDSDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHVSMPKDEAQLYAANELYNRGWFYHKEHRLWFIRVSNMEPLVKTTTYERGSYLCFDPHTFETVRKDNFVLHYELLEKRPALPQH

Homology

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BLAST of Sgr023396 vs. NCBI nr
Match: XP_022146127.1 (probable NOT transcription complex subunit VIP2 isoform X2 [Momordica charantia])

HSP 1 Score: 635.2 bits (1637), Expect = 3.8e-178
Identity = 342/443 (77.20%), Postives = 351/443 (79.23%), Query Frame = 0


Query: 1   MLGNSYPSAGGPLSQNHLQSVSSLSSLGMLNDVNSSDNSPFDINDFPQLSSRP------- 60
           MLG+SYP+AGGPLSQNH+QSV+SLSSLGMLNDVNS+DNSPFDINDFPQLSSRP       
Sbjct: 237 MLGSSYPTAGGPLSQNHIQSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQ 296

Query: 61  ---SSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQKDQHENSVPMMQS 120
              SSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQ +QHENSVPM QS
Sbjct: 297 GQLSSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPMXQS 356

Query: 121 QQFSATNNFFDLQIGRSAGFNLGSTYSHRPQQQQQHSPAAVSNSTVPF---------HLQ 180
           QQFS         IGRSAGFNLGSTYSHRPQQQQQ    AVSNSTV F         HL 
Sbjct: 357 QQFS---------IGRSAGFNLGSTYSHRPQQQQQQHSPAVSNSTVSFSPGNNQDLLHLH 416

Query: 181 IIRIFSIYTDQIYSHLHMLHPITSSGPPGIGLRPLNSPNSASGMGYDQLIQQYQQHHGQS 240
              IF        SH    H   SSGPPGIGLRPLNSPNSASGM YDQLIQQYQQHHGQS
Sbjct: 417 GSDIFP------SSHAASYHQ-QSSGPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQS 476

Query: 241 QFRLQHMSD---------------AQSSPDPFGLLGLLSVIRLSDSDLASLALGIDLTTL 300
           QFRLQHMS                AQSSPDPFGLLGLLSVIRLSD DLASLALGIDLTTL
Sbjct: 477 QFRLQHMSGVSQSFRDQGMKSMQAAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTL 536

Query: 301 GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLH---------------- 360
           GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLH                
Sbjct: 537 GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIF 596

Query: 361 VSMPKDEAQLYAANELYNRGWFYHKEHRLWFIRVSNMEPLVKTTTYERGSYLCFDPHTFE 394
            SMPKDEAQLYAANELYNRGWFYHKEHR WFIRVSNMEPLVKT+TYERGSY CFDP+TFE
Sbjct: 597 FSMPKDEAQLYAANELYNRGWFYHKEHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFE 656

[Close]

BLAST of Sgr023396 vs. NCBI nr
Match: XP_022146126.1 (probable NOT transcription complex subunit VIP2 isoform X1 [Momordica charantia])

HSP 1 Score: 633.6 bits (1633), Expect = 1.1e-177
Identity = 341/443 (76.98%), Postives = 350/443 (79.01%), Query Frame = 0


Query: 1   MLGNSYPSAGGPLSQNHLQSVSSLSSLGMLNDVNSSDNSPFDINDFPQLSSRP------- 60
           MLG+SYP+AGGPLSQNH+QSV+SLSSLGMLNDVNS+DNSPFDINDFPQLSSRP       
Sbjct: 237 MLGSSYPTAGGPLSQNHIQSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQ 296

Query: 61  ---SSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQKDQHENSVPMMQS 120
              SSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQ +QHENSVPM QS
Sbjct: 297 GQLSSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPMXQS 356

Query: 121 QQFSATNNFFDLQIGRSAGFNLGSTYSHRPQQQQQHSPAAVSNSTVPF---------HLQ 180
           QQFS         IGRSAGFNLGSTYSHRPQQQQQ    AVSNSTV F         HL 
Sbjct: 357 QQFS---------IGRSAGFNLGSTYSHRPQQQQQQHSPAVSNSTVSFSPGNNQDLLHLH 416

Query: 181 IIRIFSIYTDQIYSHLHMLHPITSSGPPGIGLRPLNSPNSASGMGYDQLIQQYQQHHGQS 240
              IF        SH    H   SSGPPGIGLRPLNSPNSASGM YDQLIQQYQQHHGQS
Sbjct: 417 GSDIFP------SSHAASYHQ-QSSGPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQS 476

Query: 241 QFRLQHMSD---------------AQSSPDPFGLLGLLSVIRLSDSDLASLALGIDLTTL 300
           QFRLQHMS                AQSSPDPFGLLGLLSVIRLSD DLASLALGIDLTTL
Sbjct: 477 QFRLQHMSGVSQSFRDQGMKSMQAAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTL 536

Query: 301 GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLH---------------- 360
           GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLH                
Sbjct: 537 GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFLKFSLETLFYIF 596

Query: 361 VSMPKDEAQLYAANELYNRGWFYHKEHRLWFIRVSNMEPLVKTTTYERGSYLCFDPHTFE 394
            SMPKDEAQLYAANELYNRGWFYHKEHR WFIRV N+EPLVK +TYERGSY CFDPHTFE
Sbjct: 597 FSMPKDEAQLYAANELYNRGWFYHKEHRFWFIRVPNIEPLVKMSTYERGSYHCFDPHTFE 656

[Close]

BLAST of Sgr023396 vs. NCBI nr
Match: XP_022947129.1 (probable NOT transcription complex subunit VIP2 isoform X4 [Cucurbita moschata])

HSP 1 Score: 632.9 bits (1631), Expect = 1.9e-177
Identity = 340/443 (76.75%), Postives = 353/443 (79.68%), Query Frame = 0


Query: 1   MLGNSYPSAGGPLSQNHLQSVSSLSSLGMLNDVNSSDNSPFDINDFPQLSSRP------- 60
           ML NSYPSAGGPLSQNH+Q+V+SL+SLGMLNDVNSSDNSPFDINDFPQL+SRP       
Sbjct: 199 MLSNSYPSAGGPLSQNHIQNVNSLNSLGMLNDVNSSDNSPFDINDFPQLTSRPSSAGGPQ 258

Query: 61  ---SSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQKDQHENSVPMMQS 120
              SSLRKQGLSPIVQQNQEFSIQ+EDFPAL RFKGGN DYGMDIHQKDQHENSVP+MQS
Sbjct: 259 GQLSSLRKQGLSPIVQQNQEFSIQSEDFPALSRFKGGNVDYGMDIHQKDQHENSVPIMQS 318

Query: 121 QQFSATNNFFDLQIGRSAGFNLGSTYSHRPQQQQQHSPAAVSNSTVPF---------HLQ 180
           QQFS         IGRSAGFNLGSTYSHRPQQQQQHSP AVSNSTV F         HL 
Sbjct: 319 QQFS---------IGRSAGFNLGSTYSHRPQQQQQHSP-AVSNSTVSFPPANNQDLLHLH 378

Query: 181 IIRIFSIYTDQIYSHLHMLHPITSSGPPGIGLRPLNSPNSASGMGYDQLIQQYQQHHGQS 240
              IF        SH    H   SSGPPGIGLRPL+SPNS SGMGYDQLIQQYQQHH Q 
Sbjct: 379 GSDIFP------SSHAASYHQ-QSSGPPGIGLRPLSSPNSVSGMGYDQLIQQYQQHHSQP 438

Query: 241 QFRLQHMSD---------------AQSSPDPFGLLGLLSVIRLSDSDLASLALGIDLTTL 300
           QFRLQHMS                AQSSPDPFGLLGLLSVIRLSD DLASLALGIDLTTL
Sbjct: 439 QFRLQHMSGVSQSFRDQGMKSMQAAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTL 498

Query: 301 GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLH---------------- 360
           GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPP+LH                
Sbjct: 499 GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPSLHQGYFSKFTLETLFYIF 558

Query: 361 VSMPKDEAQLYAANELYNRGWFYHKEHRLWFIRVSNMEPLVKTTTYERGSYLCFDPHTFE 394
            SMPKDEAQLYAANELYNRGWFYHKEHR WFIRVSNMEPLVKT++YERGSYLCFDPHTFE
Sbjct: 559 FSMPKDEAQLYAANELYNRGWFYHKEHRFWFIRVSNMEPLVKTSSYERGSYLCFDPHTFE 618

[Close]

BLAST of Sgr023396 vs. NCBI nr
Match: XP_023532180.1 (probable NOT transcription complex subunit VIP2 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 632.9 bits (1631), Expect = 1.9e-177
Identity = 340/443 (76.75%), Postives = 353/443 (79.68%), Query Frame = 0


Query: 1   MLGNSYPSAGGPLSQNHLQSVSSLSSLGMLNDVNSSDNSPFDINDFPQLSSRP------- 60
           ML NSYPSAGGPLSQNH+Q+V+SL+SLGMLNDVNSSDNSPFDINDFPQL+SRP       
Sbjct: 233 MLSNSYPSAGGPLSQNHIQNVNSLNSLGMLNDVNSSDNSPFDINDFPQLTSRPSSAGGPQ 292

Query: 61  ---SSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQKDQHENSVPMMQS 120
              SSLRKQGLSPIVQQNQEFSIQ+EDFPAL RFKGGN DYGMDIHQKDQHENSVP+MQS
Sbjct: 293 GQLSSLRKQGLSPIVQQNQEFSIQSEDFPALSRFKGGNVDYGMDIHQKDQHENSVPIMQS 352

Query: 121 QQFSATNNFFDLQIGRSAGFNLGSTYSHRPQQQQQHSPAAVSNSTVPF---------HLQ 180
           QQFS         IGRSAGFNLGSTYSHRPQQQQQHSP AVSNSTV F         HL 
Sbjct: 353 QQFS---------IGRSAGFNLGSTYSHRPQQQQQHSP-AVSNSTVSFPPANNQDLLHLH 412

Query: 181 IIRIFSIYTDQIYSHLHMLHPITSSGPPGIGLRPLNSPNSASGMGYDQLIQQYQQHHGQS 240
              IF        SH    H   SSGPPGIGLRPL+SPNS SGMGYDQLIQQYQQHH Q 
Sbjct: 413 GSDIFP------SSHAASYHQ-QSSGPPGIGLRPLSSPNSVSGMGYDQLIQQYQQHHSQP 472

Query: 241 QFRLQHMSD---------------AQSSPDPFGLLGLLSVIRLSDSDLASLALGIDLTTL 300
           QFRLQHMS                AQSSPDPFGLLGLLSVIRLSD DLASLALGIDLTTL
Sbjct: 473 QFRLQHMSGVSQSFRDQGMKSMQAAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTL 532

Query: 301 GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLH---------------- 360
           GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPP+LH                
Sbjct: 533 GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPSLHQGYFSKFTLETLFYIF 592

Query: 361 VSMPKDEAQLYAANELYNRGWFYHKEHRLWFIRVSNMEPLVKTTTYERGSYLCFDPHTFE 394
            SMPKDEAQLYAANELYNRGWFYHKEHR WFIRVSNMEPLVKT++YERGSYLCFDPHTFE
Sbjct: 593 FSMPKDEAQLYAANELYNRGWFYHKEHRFWFIRVSNMEPLVKTSSYERGSYLCFDPHTFE 652

[Close]

BLAST of Sgr023396 vs. NCBI nr
Match: XP_022947126.1 (probable NOT transcription complex subunit VIP2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 632.9 bits (1631), Expect = 1.9e-177
Identity = 340/443 (76.75%), Postives = 353/443 (79.68%), Query Frame = 0


Query: 1   MLGNSYPSAGGPLSQNHLQSVSSLSSLGMLNDVNSSDNSPFDINDFPQLSSRP------- 60
           ML NSYPSAGGPLSQNH+Q+V+SL+SLGMLNDVNSSDNSPFDINDFPQL+SRP       
Sbjct: 237 MLSNSYPSAGGPLSQNHIQNVNSLNSLGMLNDVNSSDNSPFDINDFPQLTSRPSSAGGPQ 296

Query: 61  ---SSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQKDQHENSVPMMQS 120
              SSLRKQGLSPIVQQNQEFSIQ+EDFPAL RFKGGN DYGMDIHQKDQHENSVP+MQS
Sbjct: 297 GQLSSLRKQGLSPIVQQNQEFSIQSEDFPALSRFKGGNVDYGMDIHQKDQHENSVPIMQS 356

Query: 121 QQFSATNNFFDLQIGRSAGFNLGSTYSHRPQQQQQHSPAAVSNSTVPF---------HLQ 180
           QQFS         IGRSAGFNLGSTYSHRPQQQQQHSP AVSNSTV F         HL 
Sbjct: 357 QQFS---------IGRSAGFNLGSTYSHRPQQQQQHSP-AVSNSTVSFPPANNQDLLHLH 416

Query: 181 IIRIFSIYTDQIYSHLHMLHPITSSGPPGIGLRPLNSPNSASGMGYDQLIQQYQQHHGQS 240
              IF        SH    H   SSGPPGIGLRPL+SPNS SGMGYDQLIQQYQQHH Q 
Sbjct: 417 GSDIFP------SSHAASYHQ-QSSGPPGIGLRPLSSPNSVSGMGYDQLIQQYQQHHSQP 476

Query: 241 QFRLQHMSD---------------AQSSPDPFGLLGLLSVIRLSDSDLASLALGIDLTTL 300
           QFRLQHMS                AQSSPDPFGLLGLLSVIRLSD DLASLALGIDLTTL
Sbjct: 477 QFRLQHMSGVSQSFRDQGMKSMQAAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTL 536

Query: 301 GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLH---------------- 360
           GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPP+LH                
Sbjct: 537 GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPSLHQGYFSKFTLETLFYIF 596

Query: 361 VSMPKDEAQLYAANELYNRGWFYHKEHRLWFIRVSNMEPLVKTTTYERGSYLCFDPHTFE 394
            SMPKDEAQLYAANELYNRGWFYHKEHR WFIRVSNMEPLVKT++YERGSYLCFDPHTFE
Sbjct: 597 FSMPKDEAQLYAANELYNRGWFYHKEHRFWFIRVSNMEPLVKTSSYERGSYLCFDPHTFE 656

[Close]

BLAST of Sgr023396 vs. ExPASy Swiss-Prot
Match: Q52JK6 (Probable NOT transcription complex subunit VIP2 (Fragment) OS=Nicotiana benthamiana OX=4100 GN=VIP2 PE=1 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 8.3e-152
Identity = 284/436 (65.14%), Postives = 326/436 (74.77%), Query Frame = 0


Query: 1   MLGNSYPSAGGPLSQNHLQSVSSLSSLGMLNDVNSSDNSPFDINDFPQLSSRPS------ 60
           MLGNSYP AGGPLSQNH+Q++ + +S+G+LNDVNS+D SPFDINDFPQLSSRPS      
Sbjct: 178 MLGNSYP-AGGPLSQNHVQAIGNFNSMGLLNDVNSNDGSPFDINDFPQLSSRPSSAGGPQ 237

Query: 61  ----SLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQKDQ-HENSVPMMQ 120
               SLRKQGLSPIVQQNQEFSIQNEDFPALP FKGGNADY MD HQK+Q H+N++ MMQ
Sbjct: 238 GQLGSLRKQGLSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDPHQKEQLHDNTLSMMQ 297

Query: 121 SQQFSATNNFFDLQIGRSAGFNLGSTY-SHRPQQQQQHSPAAVSNSTVPFHLQIIRIFSI 180
            Q FS         +GRSAGFNLG TY S+RPQQQ QH+P+  S      ++    + S+
Sbjct: 298 QQHFS---------MGRSAGFNLGGTYSSNRPQQQLQHAPSVSSGGVSFSNINNQDLLSL 357

Query: 181 YTDQIYSHLHMLHPITSSGPPGIGLRPLNSPNSASGMG-YDQLIQQYQQHHGQSQFRLQH 240
           +   ++   H  +     GPPGIGLRPLNS  + SG+G YDQLIQQYQQH GQSQFRLQ 
Sbjct: 358 HGSDVFQSSHSSYQQQGGGPPGIGLRPLNSSGTVSGIGSYDQLIQQYQQHQGQSQFRLQQ 417

Query: 241 MS--------------DAQSSPDPFGLLGLLSVIRLSDSDLASLALGIDLTTLGLNLNSA 300
           MS               +Q +PDPFG+LGLLSVIR+SD DL SLALGIDLTTLGLNLNSA
Sbjct: 418 MSTLGQPFRDQSLKSMQSQVAPDPFGMLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSA 477

Query: 301 DNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLH----------------VSMPKDE 360
           +NL+KTFGSPWSDEPAKGDP+F VPQCY  K PP L+                 SMPKDE
Sbjct: 478 ENLYKTFGSPWSDEPAKGDPEFTVPQCYYAKQPPPLNQAYFSKFQLDTLFYIFYSMPKDE 537

Query: 361 AQLYAANELYNRGWFYHKEHRLWFIRVSNMEPLVKTTTYERGSYLCFDPHTFETVRKDNF 394
           AQLYAANELYNRGWFYH+EHRLWF+RV+NMEPLVKT  YERGSY+CFDP+T+ET+ KDNF
Sbjct: 538 AQLYAANELYNRGWFYHREHRLWFMRVANMEPLVKTNAYERGSYICFDPNTWETIHKDNF 597

[Close]

BLAST of Sgr023396 vs. ExPASy Swiss-Prot
Match: Q9FPW4 (Probable NOT transcription complex subunit VIP2 OS=Arabidopsis thaliana OX=3702 GN=VIP2 PE=1 SV=2)

HSP 1 Score: 398.7 bits (1023), Expect = 7.8e-110
Identity = 233/433 (53.81%), Postives = 283/433 (65.36%), Query Frame = 0


Query: 1   MLGNSYPSAGGPLSQNHLQSVSSLSSLGMLNDVNSSDNSPFDI-NDFPQLSSRP------ 60
           MLGNSY + GGPLSQNH+QSV+++    ML+D + +D+S FDI NDFPQL+SRP      
Sbjct: 232 MLGNSYHTGGGPLSQNHVQSVNNM----MLSD-HPNDSSLFDINNDFPQLTSRPGSAGGT 291

Query: 61  ----SSLRKQGLS-PIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQKDQ-HENSVPM 120
                SLRKQGL  P+VQQNQEFSIQNEDFPALP +KGGN++Y MD+HQK+Q H+N++ M
Sbjct: 292 QGHLGSLRKQGLGVPLVQQNQEFSIQNEDFPALPGYKGGNSEYPMDLHQKEQLHDNAMSM 351

Query: 121 MQSQQFSATNNFFDLQIGRSAGFNLGSTY-SHRPQQQQQHSPAAVSNSTVPFHLQIIRIF 180
           M SQ FS         +GRS GFNLG+TY SHRPQQQ QH+                   
Sbjct: 352 MHSQNFS---------MGRSGGFNLGATYSSHRPQQQPQHTS------------------ 411

Query: 181 SIYTDQIYSHLHMLHPITSSGPPGIGLRPLNSPNSASGMGYDQLIQQYQQHHGQSQFRLQ 240
                            ++ G  G+GLRPL+SPN+ S +GYDQLIQQYQQH  QSQF +Q
Sbjct: 412 -----------------STGGLQGLGLRPLSSPNAVSSIGYDQLIQQYQQHQNQSQFPVQ 471

Query: 241 HMS-----------DAQSSPDPFGLLGLLSVIRLSDSDLASLALGIDLTTLGLNLNSADN 300
            MS             QS  DPF LLGLL V+  S+ +L SLALGIDLTTLGL+LNS  N
Sbjct: 472 QMSSINQFRDSEMKSTQSEADPFCLLGLLDVLNRSNPELTSLALGIDLTTLGLDLNSTGN 531

Query: 301 LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTL----------------HVSMPKDEAQ 360
           L+KTF SPW++EPAK + +F VP CY    PP L                  SMPKDEAQ
Sbjct: 532 LYKTFASPWTNEPAKSEVEFTVPNCYYATEPPPLTRASFKRFSYELLFYTFYSMPKDEAQ 591

Query: 361 LYAANELYNRGWFYHKEHRLWFIRVSNMEPLVKTTTYERGSYLCFDPHTFETVRKDNFVL 393
           LYAA+ELY RGWFYHKE R+WF RV   EPLV+  TYERG+Y   DP++F+TVRK++FV+
Sbjct: 592 LYAADELYERGWFYHKELRVWFFRVG--EPLVRAATYERGTYEYLDPNSFKTVRKEHFVI 613

[Close]

BLAST of Sgr023396 vs. ExPASy Swiss-Prot
Match: Q9NZN8 (CCR4-NOT transcription complex subunit 2 OS=Homo sapiens OX=9606 GN=CNOT2 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.2e-30
Identity = 81/177 (45.76%), Postives = 103/177 (58.19%), Query Frame = 0


Query: 236 DPFGLLGLLSVIRLSDSD--LASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAK-GD 295
           D FG++GLL+ IR +++D  +  LALG DLTTLGLNLNS +NL+  F SPW+  P +  D
Sbjct: 353 DQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQD 412

Query: 296 PDFNVPQCYL----IKPPPT--------------LHVSMPKDEAQLYAANELYNRGWFYH 355
            DF+VP  YL    I+                  L+     D  QL AA EL+NR W YH
Sbjct: 413 IDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYH 472

Query: 356 KEHRLWFIRVSNMEPLVKTTTYERGSYLCFDPHTFETVRKDNFVLHYELLEKRPALP 392
           KE R+W  R   MEP +KT TYERG+Y  FD   +  V K+ F L Y+ LE+RP LP
Sbjct: 473 KEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKE-FHLEYDKLEERPHLP 528

[Close]

BLAST of Sgr023396 vs. ExPASy Swiss-Prot
Match: Q8C5L3 (CCR4-NOT transcription complex subunit 2 OS=Mus musculus OX=10090 GN=Cnot2 PE=1 SV=2)

HSP 1 Score: 135.6 bits (340), Expect = 1.2e-30
Identity = 81/177 (45.76%), Postives = 103/177 (58.19%), Query Frame = 0


Query: 236 DPFGLLGLLSVIRLSDSD--LASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAK-GD 295
           D FG++GLL+ IR +++D  +  LALG DLTTLGLNLNS +NL+  F SPW+  P +  D
Sbjct: 353 DQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQD 412

Query: 296 PDFNVPQCYL----IKPPPT--------------LHVSMPKDEAQLYAANELYNRGWFYH 355
            DF+VP  YL    I+                  L+     D  QL AA EL+NR W YH
Sbjct: 413 IDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYH 472

Query: 356 KEHRLWFIRVSNMEPLVKTTTYERGSYLCFDPHTFETVRKDNFVLHYELLEKRPALP 392
           KE R+W  R   MEP +KT TYERG+Y  FD   +  V K+ F L Y+ LE+RP LP
Sbjct: 473 KEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKE-FHLEYDKLEERPHLP 528

[Close]

BLAST of Sgr023396 vs. ExPASy Swiss-Prot
Match: Q94547 (Regulator of gene activity OS=Drosophila melanogaster OX=7227 GN=Rga PE=1 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 1.2e-20
Identity = 69/194 (35.57%), Postives = 101/194 (52.06%), Query Frame = 0


Query: 229 SDAQSSPD-------------PFGLLGLLSVIRLSDSD--LASLALGIDLTTLGLNLNSA 288
           S  Q+SPD              FG++GLL+ IR +++D  L +L+LG DLT LGLNLNS 
Sbjct: 382 SGVQTSPDGKVTNIPATMVNNQFGMVGLLTFIRAAETDPNLVTLSLGTDLTGLGLNLNSQ 441

Query: 289 DNLHKTFGSPWSDEPAKG-DPDFNVPQCYLIKPPPTLHVSMP------------------ 348
           ++LH TF  P+  +P +  D +FNVP  YLI       ++ P                  
Sbjct: 442 ESLHTTFAGPFVAQPCRAQDVEFNVPPEYLINFAIRDKLTAPVLKKLQEDLLFFLFYTNI 501

Query: 349 KDEAQLYAANELYNRGWFYHKEHRLWFIRVSNMEPLVKTTTYERGSYLCFDPHTFETVRK 389
            D  QL AA EL++R W YH E ++W  R+  ++   K  T ERG++  FD  +++ + K
Sbjct: 502 GDMMQLMAAAELHSREWRYHVEEKIWITRIPGIDQYEKNGTKERGTFYYFDAQSWKRLSK 561

[Close]

BLAST of Sgr023396 vs. ExPASy TrEMBL
Match: A0A6J1CYQ6 (probable NOT transcription complex subunit VIP2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015420 PE=3 SV=1)

HSP 1 Score: 635.2 bits (1637), Expect = 1.8e-178
Identity = 342/443 (77.20%), Postives = 351/443 (79.23%), Query Frame = 0


Query: 1   MLGNSYPSAGGPLSQNHLQSVSSLSSLGMLNDVNSSDNSPFDINDFPQLSSRP------- 60
           MLG+SYP+AGGPLSQNH+QSV+SLSSLGMLNDVNS+DNSPFDINDFPQLSSRP       
Sbjct: 237 MLGSSYPTAGGPLSQNHIQSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQ 296

Query: 61  ---SSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQKDQHENSVPMMQS 120
              SSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQ +QHENSVPM QS
Sbjct: 297 GQLSSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPMXQS 356

Query: 121 QQFSATNNFFDLQIGRSAGFNLGSTYSHRPQQQQQHSPAAVSNSTVPF---------HLQ 180
           QQFS         IGRSAGFNLGSTYSHRPQQQQQ    AVSNSTV F         HL 
Sbjct: 357 QQFS---------IGRSAGFNLGSTYSHRPQQQQQQHSPAVSNSTVSFSPGNNQDLLHLH 416

Query: 181 IIRIFSIYTDQIYSHLHMLHPITSSGPPGIGLRPLNSPNSASGMGYDQLIQQYQQHHGQS 240
              IF        SH    H   SSGPPGIGLRPLNSPNSASGM YDQLIQQYQQHHGQS
Sbjct: 417 GSDIFP------SSHAASYHQ-QSSGPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQS 476

Query: 241 QFRLQHMSD---------------AQSSPDPFGLLGLLSVIRLSDSDLASLALGIDLTTL 300
           QFRLQHMS                AQSSPDPFGLLGLLSVIRLSD DLASLALGIDLTTL
Sbjct: 477 QFRLQHMSGVSQSFRDQGMKSMQAAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTL 536

Query: 301 GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLH---------------- 360
           GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLH                
Sbjct: 537 GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFSKFRLETLFYIF 596

Query: 361 VSMPKDEAQLYAANELYNRGWFYHKEHRLWFIRVSNMEPLVKTTTYERGSYLCFDPHTFE 394
            SMPKDEAQLYAANELYNRGWFYHKEHR WFIRVSNMEPLVKT+TYERGSY CFDP+TFE
Sbjct: 597 FSMPKDEAQLYAANELYNRGWFYHKEHRFWFIRVSNMEPLVKTSTYERGSYHCFDPNTFE 656

[Close]

BLAST of Sgr023396 vs. ExPASy TrEMBL
Match: A0A6J1CYE2 (probable NOT transcription complex subunit VIP2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015420 PE=3 SV=1)

HSP 1 Score: 633.6 bits (1633), Expect = 5.3e-178
Identity = 341/443 (76.98%), Postives = 350/443 (79.01%), Query Frame = 0


Query: 1   MLGNSYPSAGGPLSQNHLQSVSSLSSLGMLNDVNSSDNSPFDINDFPQLSSRP------- 60
           MLG+SYP+AGGPLSQNH+QSV+SLSSLGMLNDVNS+DNSPFDINDFPQLSSRP       
Sbjct: 237 MLGSSYPTAGGPLSQNHIQSVNSLSSLGMLNDVNSNDNSPFDINDFPQLSSRPSSAGGPQ 296

Query: 61  ---SSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQKDQHENSVPMMQS 120
              SSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQ +QHENSVPM QS
Sbjct: 297 GQLSSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQTEQHENSVPMXQS 356

Query: 121 QQFSATNNFFDLQIGRSAGFNLGSTYSHRPQQQQQHSPAAVSNSTVPF---------HLQ 180
           QQFS         IGRSAGFNLGSTYSHRPQQQQQ    AVSNSTV F         HL 
Sbjct: 357 QQFS---------IGRSAGFNLGSTYSHRPQQQQQQHSPAVSNSTVSFSPGNNQDLLHLH 416

Query: 181 IIRIFSIYTDQIYSHLHMLHPITSSGPPGIGLRPLNSPNSASGMGYDQLIQQYQQHHGQS 240
              IF        SH    H   SSGPPGIGLRPLNSPNSASGM YDQLIQQYQQHHGQS
Sbjct: 417 GSDIFP------SSHAASYHQ-QSSGPPGIGLRPLNSPNSASGMSYDQLIQQYQQHHGQS 476

Query: 241 QFRLQHMSD---------------AQSSPDPFGLLGLLSVIRLSDSDLASLALGIDLTTL 300
           QFRLQHMS                AQSSPDPFGLLGLLSVIRLSD DLASLALGIDLTTL
Sbjct: 477 QFRLQHMSGVSQSFRDQGMKSMQAAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTL 536

Query: 301 GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLH---------------- 360
           GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLH                
Sbjct: 537 GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLHQGYFLKFSLETLFYIF 596

Query: 361 VSMPKDEAQLYAANELYNRGWFYHKEHRLWFIRVSNMEPLVKTTTYERGSYLCFDPHTFE 394
            SMPKDEAQLYAANELYNRGWFYHKEHR WFIRV N+EPLVK +TYERGSY CFDPHTFE
Sbjct: 597 FSMPKDEAQLYAANELYNRGWFYHKEHRFWFIRVPNIEPLVKMSTYERGSYHCFDPHTFE 656

[Close]

BLAST of Sgr023396 vs. ExPASy TrEMBL
Match: A0A6J1G5W2 (probable NOT transcription complex subunit VIP2 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111451091 PE=3 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 9.1e-178
Identity = 340/443 (76.75%), Postives = 353/443 (79.68%), Query Frame = 0


Query: 1   MLGNSYPSAGGPLSQNHLQSVSSLSSLGMLNDVNSSDNSPFDINDFPQLSSRP------- 60
           ML NSYPSAGGPLSQNH+Q+V+SL+SLGMLNDVNSSDNSPFDINDFPQL+SRP       
Sbjct: 199 MLSNSYPSAGGPLSQNHIQNVNSLNSLGMLNDVNSSDNSPFDINDFPQLTSRPSSAGGPQ 258

Query: 61  ---SSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQKDQHENSVPMMQS 120
              SSLRKQGLSPIVQQNQEFSIQ+EDFPAL RFKGGN DYGMDIHQKDQHENSVP+MQS
Sbjct: 259 GQLSSLRKQGLSPIVQQNQEFSIQSEDFPALSRFKGGNVDYGMDIHQKDQHENSVPIMQS 318

Query: 121 QQFSATNNFFDLQIGRSAGFNLGSTYSHRPQQQQQHSPAAVSNSTVPF---------HLQ 180
           QQFS         IGRSAGFNLGSTYSHRPQQQQQHSP AVSNSTV F         HL 
Sbjct: 319 QQFS---------IGRSAGFNLGSTYSHRPQQQQQHSP-AVSNSTVSFPPANNQDLLHLH 378

Query: 181 IIRIFSIYTDQIYSHLHMLHPITSSGPPGIGLRPLNSPNSASGMGYDQLIQQYQQHHGQS 240
              IF        SH    H   SSGPPGIGLRPL+SPNS SGMGYDQLIQQYQQHH Q 
Sbjct: 379 GSDIFP------SSHAASYHQ-QSSGPPGIGLRPLSSPNSVSGMGYDQLIQQYQQHHSQP 438

Query: 241 QFRLQHMSD---------------AQSSPDPFGLLGLLSVIRLSDSDLASLALGIDLTTL 300
           QFRLQHMS                AQSSPDPFGLLGLLSVIRLSD DLASLALGIDLTTL
Sbjct: 439 QFRLQHMSGVSQSFRDQGMKSMQAAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTL 498

Query: 301 GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLH---------------- 360
           GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPP+LH                
Sbjct: 499 GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPSLHQGYFSKFTLETLFYIF 558

Query: 361 VSMPKDEAQLYAANELYNRGWFYHKEHRLWFIRVSNMEPLVKTTTYERGSYLCFDPHTFE 394
            SMPKDEAQLYAANELYNRGWFYHKEHR WFIRVSNMEPLVKT++YERGSYLCFDPHTFE
Sbjct: 559 FSMPKDEAQLYAANELYNRGWFYHKEHRFWFIRVSNMEPLVKTSSYERGSYLCFDPHTFE 618

[Close]

BLAST of Sgr023396 vs. ExPASy TrEMBL
Match: A0A6J1G5K7 (probable NOT transcription complex subunit VIP2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451091 PE=3 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 9.1e-178
Identity = 340/443 (76.75%), Postives = 353/443 (79.68%), Query Frame = 0


Query: 1   MLGNSYPSAGGPLSQNHLQSVSSLSSLGMLNDVNSSDNSPFDINDFPQLSSRP------- 60
           ML NSYPSAGGPLSQNH+Q+V+SL+SLGMLNDVNSSDNSPFDINDFPQL+SRP       
Sbjct: 233 MLSNSYPSAGGPLSQNHIQNVNSLNSLGMLNDVNSSDNSPFDINDFPQLTSRPSSAGGPQ 292

Query: 61  ---SSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQKDQHENSVPMMQS 120
              SSLRKQGLSPIVQQNQEFSIQ+EDFPAL RFKGGN DYGMDIHQKDQHENSVP+MQS
Sbjct: 293 GQLSSLRKQGLSPIVQQNQEFSIQSEDFPALSRFKGGNVDYGMDIHQKDQHENSVPIMQS 352

Query: 121 QQFSATNNFFDLQIGRSAGFNLGSTYSHRPQQQQQHSPAAVSNSTVPF---------HLQ 180
           QQFS         IGRSAGFNLGSTYSHRPQQQQQHSP AVSNSTV F         HL 
Sbjct: 353 QQFS---------IGRSAGFNLGSTYSHRPQQQQQHSP-AVSNSTVSFPPANNQDLLHLH 412

Query: 181 IIRIFSIYTDQIYSHLHMLHPITSSGPPGIGLRPLNSPNSASGMGYDQLIQQYQQHHGQS 240
              IF        SH    H   SSGPPGIGLRPL+SPNS SGMGYDQLIQQYQQHH Q 
Sbjct: 413 GSDIFP------SSHAASYHQ-QSSGPPGIGLRPLSSPNSVSGMGYDQLIQQYQQHHSQP 472

Query: 241 QFRLQHMSD---------------AQSSPDPFGLLGLLSVIRLSDSDLASLALGIDLTTL 300
           QFRLQHMS                AQSSPDPFGLLGLLSVIRLSD DLASLALGIDLTTL
Sbjct: 473 QFRLQHMSGVSQSFRDQGMKSMQAAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTL 532

Query: 301 GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLH---------------- 360
           GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPP+LH                
Sbjct: 533 GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPSLHQGYFSKFTLETLFYIF 592

Query: 361 VSMPKDEAQLYAANELYNRGWFYHKEHRLWFIRVSNMEPLVKTTTYERGSYLCFDPHTFE 394
            SMPKDEAQLYAANELYNRGWFYHKEHR WFIRVSNMEPLVKT++YERGSYLCFDPHTFE
Sbjct: 593 FSMPKDEAQLYAANELYNRGWFYHKEHRFWFIRVSNMEPLVKTSSYERGSYLCFDPHTFE 652

[Close]

BLAST of Sgr023396 vs. ExPASy TrEMBL
Match: A0A6J1G5I6 (probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451091 PE=3 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 9.1e-178
Identity = 340/443 (76.75%), Postives = 353/443 (79.68%), Query Frame = 0


Query: 1   MLGNSYPSAGGPLSQNHLQSVSSLSSLGMLNDVNSSDNSPFDINDFPQLSSRP------- 60
           ML NSYPSAGGPLSQNH+Q+V+SL+SLGMLNDVNSSDNSPFDINDFPQL+SRP       
Sbjct: 237 MLSNSYPSAGGPLSQNHIQNVNSLNSLGMLNDVNSSDNSPFDINDFPQLTSRPSSAGGPQ 296

Query: 61  ---SSLRKQGLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQKDQHENSVPMMQS 120
              SSLRKQGLSPIVQQNQEFSIQ+EDFPAL RFKGGN DYGMDIHQKDQHENSVP+MQS
Sbjct: 297 GQLSSLRKQGLSPIVQQNQEFSIQSEDFPALSRFKGGNVDYGMDIHQKDQHENSVPIMQS 356

Query: 121 QQFSATNNFFDLQIGRSAGFNLGSTYSHRPQQQQQHSPAAVSNSTVPF---------HLQ 180
           QQFS         IGRSAGFNLGSTYSHRPQQQQQHSP AVSNSTV F         HL 
Sbjct: 357 QQFS---------IGRSAGFNLGSTYSHRPQQQQQHSP-AVSNSTVSFPPANNQDLLHLH 416

Query: 181 IIRIFSIYTDQIYSHLHMLHPITSSGPPGIGLRPLNSPNSASGMGYDQLIQQYQQHHGQS 240
              IF        SH    H   SSGPPGIGLRPL+SPNS SGMGYDQLIQQYQQHH Q 
Sbjct: 417 GSDIFP------SSHAASYHQ-QSSGPPGIGLRPLSSPNSVSGMGYDQLIQQYQQHHSQP 476

Query: 241 QFRLQHMSD---------------AQSSPDPFGLLGLLSVIRLSDSDLASLALGIDLTTL 300
           QFRLQHMS                AQSSPDPFGLLGLLSVIRLSD DLASLALGIDLTTL
Sbjct: 477 QFRLQHMSGVSQSFRDQGMKSMQAAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTL 536

Query: 301 GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLH---------------- 360
           GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPP+LH                
Sbjct: 537 GLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPSLHQGYFSKFTLETLFYIF 596

Query: 361 VSMPKDEAQLYAANELYNRGWFYHKEHRLWFIRVSNMEPLVKTTTYERGSYLCFDPHTFE 394
            SMPKDEAQLYAANELYNRGWFYHKEHR WFIRVSNMEPLVKT++YERGSYLCFDPHTFE
Sbjct: 597 FSMPKDEAQLYAANELYNRGWFYHKEHRFWFIRVSNMEPLVKTSSYERGSYLCFDPHTFE 656

[Close]

BLAST of Sgr023396 vs. TAIR 10
Match: AT1G07705.2 (NOT2 / NOT3 / NOT5 family )

HSP 1 Score: 484.6 bits (1246), Expect = 7.7e-137
Identity = 273/438 (62.33%), Postives = 316/438 (72.15%), Query Frame = 0


Query: 1   MLGNSYPSAGGPLSQNHLQSVSSLSSLGMLNDVNSSDNSPFDI-NDFPQLSSRPSSLRKQ 60
           MLGNSYPSAGG LSQNH+Q+++SLSS+G+LND+NS+D SPFDI NDFPQL+SRPSS   Q
Sbjct: 196 MLGNSYPSAGG-LSQNHVQAMNSLSSMGLLNDMNSNDTSPFDINNDFPQLTSRPSSAGSQ 255

Query: 61  -----------GLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQKDQ-HENSVPM 120
                      G+SPIVQQNQEFSIQNEDFPALP +KG +ADY MD+H K+Q HENSV M
Sbjct: 256 GQLGSRLKQGLGISPIVQQNQEFSIQNEDFPALPGYKGSSADYPMDLHHKEQLHENSVLM 315

Query: 121 MQSQQFSATNNFFDLQIGRSAGFNLGSTY-SHRPQQQQQHSPAAVSNSTVPFHLQIIRIF 180
           MQSQQ         L +GRS GFNLG  Y SHRPQQQQQH+  AVS+S V          
Sbjct: 316 MQSQQ---------LSMGRSGGFNLGGAYTSHRPQQQQQHA-QAVSSSGV---------- 375

Query: 181 SIYTDQIYSHLHMLHPITSSGPPGIGLRPLNSPNSASGMGYD-QLIQQYQQHHGQSQFRL 240
           S++   I+S  H  +   + G PGIGLR +NS NS +GMGYD QLIQQYQ     +Q+RL
Sbjct: 376 SLHGSDIFSSSHPPYHSQTGGAPGIGLRSMNSANSITGMGYDQQLIQQYQHQQNSAQYRL 435

Query: 241 QHMSDA---------------QSSPDPFGLLGLLSVIRLSDSDLASLALGIDLTTLGLNL 300
           Q MS A               QS+PD FGLLGLLSVI++SD DL SLALGIDLTTLGLNL
Sbjct: 436 QQMSAASQPFRDVGLKSMQSTQSNPDRFGLLGLLSVIKMSDPDLTSLALGIDLTTLGLNL 495

Query: 301 NSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLH----------------VSMP 360
           NS +NLHKTFGSPWS+EP+K DP+F+VPQCY  K PP LH                 SMP
Sbjct: 496 NSTENLHKTFGSPWSNEPSKVDPEFSVPQCYYAKNPPPLHQGLFAKLLVETLFYVFYSMP 555

Query: 361 KDEAQLYAANELYNRGWFYHKEHRLWFIRVSNMEPLVKTTTYERGSYLCFDPHTFETVRK 393
           KDEAQLYAANELYNRGWFYHKEHRLWFIR+   EPLVKT  YERGSY CFDP++FE V+K
Sbjct: 556 KDEAQLYAANELYNRGWFYHKEHRLWFIRIG--EPLVKTNAYERGSYHCFDPNSFEIVQK 610

[Close]

BLAST of Sgr023396 vs. TAIR 10
Match: AT5G59710.1 (VIRE2 interacting protein 2 )

HSP 1 Score: 398.7 bits (1023), Expect = 5.6e-111
Identity = 233/433 (53.81%), Postives = 283/433 (65.36%), Query Frame = 0


Query: 1   MLGNSYPSAGGPLSQNHLQSVSSLSSLGMLNDVNSSDNSPFDI-NDFPQLSSRP------ 60
           MLGNSY + GGPLSQNH+QSV+++    ML+D + +D+S FDI NDFPQL+SRP      
Sbjct: 232 MLGNSYHTGGGPLSQNHVQSVNNM----MLSD-HPNDSSLFDINNDFPQLTSRPGSAGGT 291

Query: 61  ----SSLRKQGLS-PIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQKDQ-HENSVPM 120
                SLRKQGL  P+VQQNQEFSIQNEDFPALP +KGGN++Y MD+HQK+Q H+N++ M
Sbjct: 292 QGHLGSLRKQGLGVPLVQQNQEFSIQNEDFPALPGYKGGNSEYPMDLHQKEQLHDNAMSM 351

Query: 121 MQSQQFSATNNFFDLQIGRSAGFNLGSTY-SHRPQQQQQHSPAAVSNSTVPFHLQIIRIF 180
           M SQ FS         +GRS GFNLG+TY SHRPQQQ QH+                   
Sbjct: 352 MHSQNFS---------MGRSGGFNLGATYSSHRPQQQPQHTS------------------ 411

Query: 181 SIYTDQIYSHLHMLHPITSSGPPGIGLRPLNSPNSASGMGYDQLIQQYQQHHGQSQFRLQ 240
                            ++ G  G+GLRPL+SPN+ S +GYDQLIQQYQQH  QSQF +Q
Sbjct: 412 -----------------STGGLQGLGLRPLSSPNAVSSIGYDQLIQQYQQHQNQSQFPVQ 471

Query: 241 HMS-----------DAQSSPDPFGLLGLLSVIRLSDSDLASLALGIDLTTLGLNLNSADN 300
            MS             QS  DPF LLGLL V+  S+ +L SLALGIDLTTLGL+LNS  N
Sbjct: 472 QMSSINQFRDSEMKSTQSEADPFCLLGLLDVLNRSNPELTSLALGIDLTTLGLDLNSTGN 531

Query: 301 LHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTL----------------HVSMPKDEAQ 360
           L+KTF SPW++EPAK + +F VP CY    PP L                  SMPKDEAQ
Sbjct: 532 LYKTFASPWTNEPAKSEVEFTVPNCYYATEPPPLTRASFKRFSYELLFYTFYSMPKDEAQ 591

Query: 361 LYAANELYNRGWFYHKEHRLWFIRVSNMEPLVKTTTYERGSYLCFDPHTFETVRKDNFVL 393
           LYAA+ELY RGWFYHKE R+WF RV   EPLV+  TYERG+Y   DP++F+TVRK++FV+
Sbjct: 592 LYAADELYERGWFYHKELRVWFFRVG--EPLVRAATYERGTYEYLDPNSFKTVRKEHFVI 613

[Close]

BLAST of Sgr023396 vs. TAIR 10
Match: AT1G07705.1 (NOT2 / NOT3 / NOT5 family )

HSP 1 Score: 375.6 bits (963), Expect = 5.0e-104
Identity = 224/372 (60.22%), Postives = 258/372 (69.35%), Query Frame = 0


Query: 1   MLGNSYPSAGGPLSQNHLQSVSSLSSLGMLNDVNSSDNSPFDI-NDFPQLSSRPSSLRKQ 60
           MLGNSYPSAGG LSQNH+Q+++SLSS+G+LND+NS+D SPFDI NDFPQL+SRPSS   Q
Sbjct: 196 MLGNSYPSAGG-LSQNHVQAMNSLSSMGLLNDMNSNDTSPFDINNDFPQLTSRPSSAGSQ 255

Query: 61  -----------GLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDIHQKDQ-HENSVPM 120
                      G+SPIVQQNQEFSIQNEDFPALP +KG +ADY MD+H K+Q HENSV M
Sbjct: 256 GQLGSRLKQGLGISPIVQQNQEFSIQNEDFPALPGYKGSSADYPMDLHHKEQLHENSVLM 315

Query: 121 MQSQQFSATNNFFDLQIGRSAGFNLGSTY-SHRPQQQQQHSPAAVSNSTVPFHLQIIRIF 180
           MQSQQ         L +GRS GFNLG  Y SHRPQQQQQH+  AVS+S V          
Sbjct: 316 MQSQQ---------LSMGRSGGFNLGGAYTSHRPQQQQQHA-QAVSSSGV---------- 375

Query: 181 SIYTDQIYSHLHMLHPITSSGPPGIGLRPLNSPNSASGMGYD-QLIQQYQQHHGQSQFRL 240
           S++   I+S  H  +   + G PGIGLR +NS NS +GMGYD QLIQQYQ     +Q+RL
Sbjct: 376 SLHGSDIFSSSHPPYHSQTGGAPGIGLRSMNSANSITGMGYDQQLIQQYQHQQNSAQYRL 435

Query: 241 QHMSDA---------------QSSPDPFGLLGLLSVIRLSDSDLASLALGIDLTTLGLNL 300
           Q MS A               QS+PD FGLLGLLSVI++SD DL SLALGIDLTTLGLNL
Sbjct: 436 QQMSAASQPFRDVGLKSMQSTQSNPDRFGLLGLLSVIKMSDPDLTSLALGIDLTTLGLNL 495

Query: 301 NSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPTLH----------------VSMP 327
           NS +NLHKTFGSPWS+EP+K DP+F+VPQCY  K PP LH                 SMP
Sbjct: 496 NSTENLHKTFGSPWSNEPSKVDPEFSVPQCYYAKNPPPLHQGLFAKLLVETLFYVFYSMP 546

The following BLAST results are available for this feature:

BLAST of Sgr023396 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146127.1	3.8e-178	77.20	probable NOT transcription complex subunit VIP2 isoform X2 [Momordica charantia]	[more]
XP_022146126.1	1.1e-177	76.98	probable NOT transcription complex subunit VIP2 isoform X1 [Momordica charantia]	[more]
XP_022947129.1	1.9e-177	76.75	probable NOT transcription complex subunit VIP2 isoform X4 [Cucurbita moschata]	[more]
XP_023532180.1	1.9e-177	76.75	probable NOT transcription complex subunit VIP2 isoform X2 [Cucurbita pepo subsp...	[more]
XP_022947126.1	1.9e-177	76.75	probable NOT transcription complex subunit VIP2 isoform X1 [Cucurbita moschata]	[more]

BLAST of Sgr023396 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q52JK6	8.3e-152	65.14	Probable NOT transcription complex subunit VIP2 (Fragment) OS=Nicotiana benthami...	[more]
Q9FPW4	7.8e-110	53.81	Probable NOT transcription complex subunit VIP2 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9NZN8	1.2e-30	45.76	CCR4-NOT transcription complex subunit 2 OS=Homo sapiens OX=9606 GN=CNOT2 PE=1 S...	[more]
Q8C5L3	1.2e-30	45.76	CCR4-NOT transcription complex subunit 2 OS=Mus musculus OX=10090 GN=Cnot2 PE=1 ...	[more]
Q94547	1.2e-20	35.57	Regulator of gene activity OS=Drosophila melanogaster OX=7227 GN=Rga PE=1 SV=2	[more]

BLAST of Sgr023396 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CYQ6	1.8e-178	77.20	probable NOT transcription complex subunit VIP2 isoform X2 OS=Momordica charanti...	[more]
A0A6J1CYE2	5.3e-178	76.98	probable NOT transcription complex subunit VIP2 isoform X1 OS=Momordica charanti...	[more]
A0A6J1G5W2	9.1e-178	76.75	probable NOT transcription complex subunit VIP2 isoform X4 OS=Cucurbita moschata...	[more]
A0A6J1G5K7	9.1e-178	76.75	probable NOT transcription complex subunit VIP2 isoform X2 OS=Cucurbita moschata...	[more]
A0A6J1G5I6	9.1e-178	76.75	probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita moschata...	[more]

BLAST of Sgr023396 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07705.2	7.7e-137	62.33	NOT2 / NOT3 / NOT5 family	[more]
AT5G59710.1	5.6e-111	53.81	VIRE2 interacting protein 2	[more]
AT1G07705.1	5.0e-104	60.22	NOT2 / NOT3 / NOT5 family	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007282	NOT2/NOT3/NOT5, C-terminal	PFAM	PF04153	NOT2_3_5	coord: 312..384 e-value: 3.5E-21 score: 75.7
IPR038635	CCR4-NOT complex subunit 2/3/5, N-terminal domain superfamily	GENE3D	2.30.30.1020		coord: 311..393 e-value: 2.4E-29 score: 104.1 coord: 230..310 e-value: 7.4E-20 score: 73.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..62
None	No IPR available	PANTHER	PTHR23326:SF15	NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED	coord: 1..393
IPR040168	Not2/Not3/Not5	PANTHER	PTHR23326	CCR4 NOT-RELATED	coord: 1..393

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr023396.1	Sgr023396.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0030015	CCR4-NOT core complex