Sgr023034 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr023034
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Descriptionglycine-rich cell wall structural protein-like
Locationtig00000729: 2157483 .. 2157869 (+)
RNA-Seq ExpressionSgr023034
SyntenySgr023034
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACATAATCAATACCTTAAGAACTCTGGTTATTCACACGATATATGTCACGGCCACAACGAGGAGCAGCGCTGCCAGATATCCACGGCAGCCGACACTGTTTGATGCGGCACCATTACCAAGAGCCGACGGTGGAGGTGGATTTAAATCCGGAGGGTTGGCGATCGACGCCGGAGGAATAATCGATGTCGCAGGAGATGTTACAGGAGCCGTAGGCGGAGCTGGAGGAGAAGCGATTGGCGCGAGTGTCGGCGGATGGGACGGAGGGAGAGCCGAAATCTTTGGAGGCAAGGTTGGGCCCATCCTCGAGGATGGCGGACTGGCGGTCCGCGTTGGTGGAGGTCGCTGGGCTGGTGATGCGGCCGGTGCGGGTCCTGGAGACTGA

mRNA sequence

ATGTACATAATCAATACCTTAAGAACTCTGGTTATTCACACGATATATGTCACGGCCACAACGAGGAGCAGCGCTGCCAGATATCCACGGCAGCCGACACTGTTTGATGCGGCACCATTACCAAGAGCCGACGGTGGAGGTGGATTTAAATCCGGAGGGTTGGCGATCGACGCCGGAGGAATAATCGATGTCGCAGGAGATGTTACAGGAGCCGTAGGCGGAGCTGGAGGAGAAGCGATTGGCGCGAGTGTCGGCGGATGGGACGGAGGGAGAGCCGAAATCTTTGGAGGCAAGGTTGGGCCCATCCTCGAGGATGGCGGACTGGCGGTCCGCGTTGGTGGAGGTCGCTGGGCTGGTGATGCGGCCGGTGCGGGTCCTGGAGACTGA

Coding sequence (CDS)

ATGTACATAATCAATACCTTAAGAACTCTGGTTATTCACACGATATATGTCACGGCCACAACGAGGAGCAGCGCTGCCAGATATCCACGGCAGCCGACACTGTTTGATGCGGCACCATTACCAAGAGCCGACGGTGGAGGTGGATTTAAATCCGGAGGGTTGGCGATCGACGCCGGAGGAATAATCGATGTCGCAGGAGATGTTACAGGAGCCGTAGGCGGAGCTGGAGGAGAAGCGATTGGCGCGAGTGTCGGCGGATGGGACGGAGGGAGAGCCGAAATCTTTGGAGGCAAGGTTGGGCCCATCCTCGAGGATGGCGGACTGGCGGTCCGCGTTGGTGGAGGTCGCTGGGCTGGTGATGCGGCCGGTGCGGGTCCTGGAGACTGA

Protein sequence

MYIINTLRTLVIHTIYVTATTRSSAARYPRQPTLFDAAPLPRADGGGGFKSGGLAIDAGGIIDVAGDVTGAVGGAGGEAIGASVGGWDGGRAEIFGGKVGPILEDGGLAVRVGGGRWAGDAAGAGPGD
Homology
BLAST of Sgr023034 vs. NCBI nr
Match: XP_022951867.1 (glycine-rich cell wall structural protein-like [Cucurbita moschata])

HSP 1 Score: 95.1 bits (235), Expect = 4.6e-16
Identity = 67/114 (58.77%), Postives = 74/114 (64.91%), Query Frame = 0

Query: 19  ATTRSSAARYPRQPTLFDAAPLPRADGGGGFKSGGLAIDAGGIIDVAGDVTGAVGGAGGE 78
           ATT  +AARYP++ TLFD APLP  DGG G   GGL  ++GG    AG +T   GGAGGE
Sbjct: 10  ATTSITAARYPQRRTLFDTAPLPGPDGGVG---GGLGFNSGGFAMDAGGMTAVAGGAGGE 69

Query: 79  AIGASVGGWD---GGRA-EIFGGKVGPILEDGGLAVRVGGGRWAGDAAGAGPGD 129
           A+G   GG D   GGRA E  G KVGPILEDGG AVRV      GDAAG  PGD
Sbjct: 70  AVGVGAGGCDLAIGGRAGETLGAKVGPILEDGGRAVRV------GDAAGGIPGD 114

BLAST of Sgr023034 vs. NCBI nr
Match: XP_023537820.1 (glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 93.2 bits (230), Expect = 1.7e-15
Identity = 66/114 (57.89%), Postives = 73/114 (64.04%), Query Frame = 0

Query: 19  ATTRSSAARYPRQPTLFDAAPLPRADGGGGFKSGGLAIDAGGIIDVAGDVTGAVGGAGGE 78
           ATT  +A RYP++ TLFDAAPLP  DGG G   GGL  ++GG    AG +T   GGAGGE
Sbjct: 9   ATTNITATRYPQRRTLFDAAPLPGPDGGVG---GGLGFNSGGFAMDAGGMTAVAGGAGGE 68

Query: 79  AIGASVGGWD---GGRA-EIFGGKVGPILEDGGLAVRVGGGRWAGDAAGAGPGD 129
           A+G   GG D   GGRA E  G KVGP LEDGG AVRV      GDAAG  PGD
Sbjct: 69  AVGVGAGGCDLATGGRAGETLGAKVGPSLEDGGRAVRV------GDAAGGIPGD 113

BLAST of Sgr023034 vs. NCBI nr
Match: KAG6585309.1 (hypothetical protein SDJN03_18042, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 85.9 bits (211), Expect = 2.8e-13
Identity = 64/121 (52.89%), Postives = 73/121 (60.33%), Query Frame = 0

Query: 12  IHTIYVTATTRSSAARYPRQPTLFDAAPLPRADGGGGFKSGGLAIDAGGIIDVAGDVTGA 71
           ++ I   A T  +A  YP++ TLFDAAPLP  DGG G   GGL  ++GG    AG +T  
Sbjct: 1   MYYIAAAAATNITATGYPQRRTLFDAAPLPGPDGGVG---GGLGFNSGGFAMDAGGMTAV 60

Query: 72  VGGAGGEAIGASVGGWD---GGRA-EIFGGKVGPILEDGGLAVRVGGGRWAGDAAGAGPG 129
            GGAGGEA+G   GG D   GGRA E  G KVGP LEDGG AV V      GDAAG  PG
Sbjct: 61  AGGAGGEAVGVGAGGCDLAIGGRAGETLGAKVGPSLEDGGRAVLV------GDAAGGIPG 112

BLAST of Sgr023034 vs. ExPASy TrEMBL
Match: A0A6J1GIV1 (glycine-rich cell wall structural protein-like OS=Cucurbita moschata OX=3662 GN=LOC111454600 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.2e-16
Identity = 67/114 (58.77%), Postives = 74/114 (64.91%), Query Frame = 0

Query: 19  ATTRSSAARYPRQPTLFDAAPLPRADGGGGFKSGGLAIDAGGIIDVAGDVTGAVGGAGGE 78
           ATT  +AARYP++ TLFD APLP  DGG G   GGL  ++GG    AG +T   GGAGGE
Sbjct: 10  ATTSITAARYPQRRTLFDTAPLPGPDGGVG---GGLGFNSGGFAMDAGGMTAVAGGAGGE 69

Query: 79  AIGASVGGWD---GGRA-EIFGGKVGPILEDGGLAVRVGGGRWAGDAAGAGPGD 129
           A+G   GG D   GGRA E  G KVGPILEDGG AVRV      GDAAG  PGD
Sbjct: 70  AVGVGAGGCDLAIGGRAGETLGAKVGPILEDGGRAVRV------GDAAGGIPGD 114

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022951867.14.6e-1658.77glycine-rich cell wall structural protein-like [Cucurbita moschata][more]
XP_023537820.11.7e-1557.89glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo][more]
KAG6585309.12.8e-1352.89hypothetical protein SDJN03_18042, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1GIV12.2e-1658.77glycine-rich cell wall structural protein-like OS=Cucurbita moschata OX=3662 GN=... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr023034.1Sgr023034.1mRNA