Sgr022675 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr022675
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionLDL1
Locationtig00000289: 2192981 .. 2195593 (+)
RNA-Seq ExpressionSgr022675
SyntenySgr022675
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGAGAAGCTTCCAAATTCTAAATCCGGCTCTCGAAATAGATCTGCAAGAAGACAGGCACAAGAGTGTGCATTTTTGGAAGGGTTTCTATCTATTTTCAGCCTCAAAGCTCGAGCATTGGCATAGTTAGCCATATTGGCTGCTTCTCTTAGTCCACTGAGAAAAGCTCCATGCATAGTTGCTGGATAACGCCTTGTAGTCGCCTCGCCAGCAAAGAAGAGTCTTCCATCTCCCACACTTTCTGCTAGGATGTCATAGTCATCGCCTGATGCCCCCACTGCAACGTTTGAGTAAGAGCCTAGACTAAATGGATCACTAGCCCATCTAGTACAGACTGTTTGTATAGGATCTGGGACATCAATTCCTTGAGGTTCATAGATACCTGCATCCCTTTATGCAAGAATCTTTTAACAACACAAAATCAACAAGAGGAGTCATTTGAAAGATAGCTATGACAAAACATTTCTGTAGGAATATACAATAAAGACAACTAACAACTTTATAAACTATATCTCGTAAAAAAAATTCCACTGTGAACACATAACATTAACATTAAAACTTTAGGGAAAAAAAAAAGGAAGAAAAGGACAGAAAAGTAAAGGAGAAAAAATAAAGTTAGGATTCTCTTAATTGGAAGTTTCTAAAAGTGATGGACTGATATATCTTAATTTTCTCTTAAAAAGTTCCTTTCCCGCTAAAATCTTTCATTTGAGGCATTCTTTAATAAAAATTCTTACTTTCCCATAAAAAGGAAAGAATGAAAAATAAATCAGTACAATTGAGGAACACTAAAGGACATCAATTCAAATCTTGGATTTCAAAGACAGTTCCAATTCAAACCTCAAGGGCACTAGAAAAATCTAACTGCAATTTCCCTTACTCGAAAACTTGTCCCATTCATTCTTGCCCCTTGTTGTAAAAAATATAAAATGCAACCATGTAATGGCTAACAACATTCTCAAGAAAGAAATGGTAGACAACTACGTTGGGGACATTTCAAGTTCAGAGATTCCATACAGAAAAAATAGTATGAGCATAAAGTTATTACCCTTAAGAATTTCAATAACCCGGGTCACAGCATCTGTTGGGGGCATGCTCTCAAACTTATGTGCAGCTTCACCTGCAACCAAGGCTATCAACAGAGGACCACCAGCAACAGTAGCATAGTTGTAAAATAGAAAGAACTCTCCTCGACGACTTGGATCATCAGACAGGTGCCCAAAGGTATCAAGATCCATTTCCCAAAACACACGAGGAAAAAGCATTGCGACCTTATTCAACAATCCAAAACCCATTCTCTTTATTCCATCCAGCTTTCTCTGAGGCAATTCTGGGATAAACTTAATAGAACCACTCTTCAAAACTCCAAGAGGTACGGTGCACAAAGCCATATCACCTTCAAAGACCTGATTTCCAGCAATAACCTGCACACCTTGACCACTGTATCTAATGGTGTGCACTGTTTTCTCATATAAAATTGAAACATTTTCAGCCAATGCTTGAATCAGCCTTCCATTGCCTCCAGCCAAGAAGCAATGGTCCCCTCCCATGTCATACGGATCATCTTGGTCCCAGAATGCAAGTGATAGCTTTGACAGCAAACCTGCATTTGCATATTCTAAATTAGCAAGGTGCCAATTGAACAAGTTCATCTCTTCACTATTCACTGCATCCCCATGATCCTGCCAGAACGTTTCCAGTGCTGCACCGAGAGAAACATCAACAGAGACCTCGCCCATTGACTGTCTAAGCATACTTGCCTTATCCAATAGATGGTTGAATGCAGTTTCCACCTTCAAGTCCATATCAGGATCCACAGGCCTCCCGTCCAGACTATAAAGTGGACACTTATCTCTAACCTTATGAAGAGAATAGCTTAATTGTCTGGCCATAATCCCGAGTGGGTTTCCCAAAGTACCCGTCAAAACACTCCCACCTAAATCTGCAGCTGCACATACCCTATTTCCTCCCTCCATCTTCTTAGTATATACCCGCCCGCCTGCTCGCTTCCTACCCTCCAAAACAGTCACTTTAAATCCAAAACGCATCAGTTGCCTAGCGGCAGCCAGACCTGCCAATCCCGCGCCGACCACAATTACACTGGGCTTAGATGGTTCGGCGGGAATTTTTTCTTTGATTGCAGGAGCAACCCCAAAATTAATATATCCATGTGAAACCAAGTAGTTATAAGCAGTATCTAGTAAAGTATGACAATGTGTAGGTATGGAATCAATAAACATCTCCTTAGTTACCCAATTTGACACATTTTCACGCCATTTAGCGATAATGTGATTCCGAATAATGATATAGTTGACCTGTTCAATTCCTCCGATAACAGAGACCACCCGGGCATCGATTTCATCCTCCGTTAGATGATCAGCAGGAAATCCGGCCGTCAGCGCAAGCAATGCCTCGGCAGTGGATTCTTTATTAATCACGATAATCTCGTCAGATACATCTGGGACGTTCGGCACGGGAACGCTGGAACTTTCAACGTTATTTCTGACTGCCGATACTGAAACTGAAGACGATGAAGAGACGACGTCATTGTTGCCATTGAAATTGCCGTTGGGAAGGGGAGGGAAATTGAACGATGTGACACTTCGCTGA

mRNA sequence

ATGACAGAGAAGCTTCCAAATTCTAAATCCGGCTCTCGAAATAGATCTGCAAGAAGACAGGCACAAGAGTGTGCATTTTTGGAAGGGTTTCTATCTATTTTCAGCCTCAAAGCTCGAGCATTGGCATACCTTCCATTGCCTCCAGCCAAGAAGCAATGGTCCCCTCCCATGTCATACGGATCATCTTGGTCCCAGAATGCAAGTGATAGCTTTGACAGCAAACCTGCATTTGCATATTCTAAATTAGCAAGTGGGTTTCCCAAAGTACCCGTCAAAACACTCCCACCTAAATCTGCAGCTGCACATACCCTATTTCCTCCCTCCATCTTCTTAGTATATACCCGCCCGCCTGCTCGCTTCCTACCCTCCAAAACAGTCACTTTAAATCCAAAACGCATCAGTTGCCTAGCGGCAGCCAGACCTGCCAATCCCGCGCCGACCACAATTACACTGGGCTTAGATGCAGGAAATCCGGCCGTCAGCGCAAGCAATGCCTCGGCAGTGGATTCTTTATTAATCACGATAATCTCGTCAGATACATCTGGGACGTTCGGCACGGGAACGCTGGAACTTTCAACGTTATTTCTGACTGCCGATACTGAAACTGAAGACGATGAAGAGACGACGTCATTGTTGCCATTGAAATTGCCGTTGGGAAGGGGAGGGAAATTGAACGATGTGACACTTCGCTGA

Coding sequence (CDS)

ATGACAGAGAAGCTTCCAAATTCTAAATCCGGCTCTCGAAATAGATCTGCAAGAAGACAGGCACAAGAGTGTGCATTTTTGGAAGGGTTTCTATCTATTTTCAGCCTCAAAGCTCGAGCATTGGCATACCTTCCATTGCCTCCAGCCAAGAAGCAATGGTCCCCTCCCATGTCATACGGATCATCTTGGTCCCAGAATGCAAGTGATAGCTTTGACAGCAAACCTGCATTTGCATATTCTAAATTAGCAAGTGGGTTTCCCAAAGTACCCGTCAAAACACTCCCACCTAAATCTGCAGCTGCACATACCCTATTTCCTCCCTCCATCTTCTTAGTATATACCCGCCCGCCTGCTCGCTTCCTACCCTCCAAAACAGTCACTTTAAATCCAAAACGCATCAGTTGCCTAGCGGCAGCCAGACCTGCCAATCCCGCGCCGACCACAATTACACTGGGCTTAGATGCAGGAAATCCGGCCGTCAGCGCAAGCAATGCCTCGGCAGTGGATTCTTTATTAATCACGATAATCTCGTCAGATACATCTGGGACGTTCGGCACGGGAACGCTGGAACTTTCAACGTTATTTCTGACTGCCGATACTGAAACTGAAGACGATGAAGAGACGACGTCATTGTTGCCATTGAAATTGCCGTTGGGAAGGGGAGGGAAATTGAACGATGTGACACTTCGCTGA

Protein sequence

MTEKLPNSKSGSRNRSARRQAQECAFLEGFLSIFSLKARALAYLPLPPAKKQWSPPMSYGSSWSQNASDSFDSKPAFAYSKLASGFPKVPVKTLPPKSAAAHTLFPPSIFLVYTRPPARFLPSKTVTLNPKRISCLAAARPANPAPTTITLGLDAGNPAVSASNASAVDSLLITIISSDTSGTFGTGTLELSTLFLTADTETEDDEETTSLLPLKLPLGRGGKLNDVTLR
Homology
[Close]
BLAST of Sgr022675 vs. NCBI nr
Match: KAG5581061.1 (hypothetical protein H5410_051688 [Solanum commersonii])

HSP 1 Score: 79.7 bits (195), Expect = 3.6e-11
Identity = 44/77 (57.14%), Postives = 54/77 (70.13%), Query Frame = 0 

Query: 80  SKLASGFPKVPVKTLPPKSAAAHTLF-PPSIFLVYTRPPARFLPSKTVTLNPKRISCLAA 139
           ++  +G P +PV TLPPKSAAA T F PP IFL  T PP   LPS+T TL+PK I+CLAA
Sbjct: 76  ARTPNGLPFIPVNTLPPKSAAATTPFCPPVIFLDRTLPPGLPLPSRTTTLSPKEINCLAA 135

Query: 140 ARPANPAPTTITLGLDA 156
            +P +PAP TIT   +A
Sbjct: 136 TKPDSPAPITITFPFEA 152

[Close]
BLAST of Sgr022675 vs. NCBI nr
Match: ACN33620.1 (unknown [Zea mays])

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-08
Identity = 41/72 (56.94%), Postives = 46/72 (63.89%), Query Frame = 0 

Query: 85  GFPKVPVKTLPPKSAAA----HTLFPPSIFLVYTRPPARFLPSKTVTLNPKRISCLAAAR 144
           G P +PV+TLPP+SAAA    ++     I LV TRPP R  PS T TLNP  I C AAAR
Sbjct: 111 GLPLIPVRTLPPRSAAATVSGYSTAEERIVLVNTRPPGRSRPSMTATLNPSAIRCRAAAR 170

Query: 145 PANPAPTTITLG 153
           PA PAPT  T G
Sbjct: 171 PARPAPTIRTDG 182

[Close]
BLAST of Sgr022675 vs. ExPASy TrEMBL
Match: C0PEK4 (Uncharacterized protein OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 8.1e-09
Identity = 41/72 (56.94%), Postives = 46/72 (63.89%), Query Frame = 0 

Query: 85  GFPKVPVKTLPPKSAAA----HTLFPPSIFLVYTRPPARFLPSKTVTLNPKRISCLAAAR 144
           G P +PV+TLPP+SAAA    ++     I LV TRPP R  PS T TLNP  I C AAAR
Sbjct: 111 GLPLIPVRTLPPRSAAATVSGYSTAEERIVLVNTRPPGRSRPSMTATLNPSAIRCRAAAR 170

Query: 145 PANPAPTTITLG 153
           PA PAPT  T G
Sbjct: 171 PARPAPTIRTDG 182

[Close]
BLAST of Sgr022675 vs. ExPASy TrEMBL
Match: A0A3Q7GJ25 (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 6.8e-08
Identity = 36/58 (62.07%), Postives = 39/58 (67.24%), Query Frame = 0 

Query: 84  SGFPKVPVKTLPPKSAAAHTLFPPSIFLVYTRPPARFLPSKTVTLNPKRISCLAAARP 142
           SGFP V VK LPPKSA A TLFPPSIF VY+ PP+ F PS  +T NP  ISC     P
Sbjct: 23  SGFPNVLVKELPPKSATA-TLFPPSIFFVYSLPPSCFRPSTIITSNPNNISCFPTTSP 79

[Close]
BLAST of Sgr022675 vs. ExPASy TrEMBL
Match: A0A0A9RRQ2 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.0e-07
Identity = 40/70 (57.14%), Postives = 44/70 (62.86%), Query Frame = 0 

Query: 85  GFPKVPVKTLPPKSAAA----HTLFPPSIFLVYTRPPARFLPSKTVTLNPKRISCLAAAR 144
           GFP +PV TLPP+SAAA    ++     I LV TRPP R LPS T TL P  I   AAAR
Sbjct: 5   GFPLIPVSTLPPRSAAATVSGYSAAEDRIVLVNTRPPGRSLPSITATLKPSDIRWRAAAR 64

Query: 145 PANPAPTTIT 151
           PA PAPT  T
Sbjct: 65  PARPAPTMRT 74

[Close]
BLAST of Sgr022675 vs. ExPASy TrEMBL
Match: A0A0A9JVL4 (LDL1 OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 5.8e-07
Identity = 40/72 (55.56%), Postives = 44/72 (61.11%), Query Frame = 0 

Query: 85  GFPKVPVKTLPPKSAAA----HTLFPPSIFLVYTRPPARFLPSKTVTLNPKRISCLAAAR 144
           GFP +PV TLPP+SA A    ++     I LV TRPP R LPS T TL P  I   AAAR
Sbjct: 5   GFPFIPVSTLPPRSAEATMSGYSAAEDRIVLVNTRPPGRSLPSITATLKPSDIRWRAAAR 64

Query: 145 PANPAPTTITLG 153
           PA PAPT  T G
Sbjct: 65  PARPAPTMRTDG 76

The following BLAST results are available for this feature:
BLAST of Sgr022675 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG5581061.13.6e-1157.14hypothetical protein H5410_051688 [Solanum commersonii][more]
ACN33620.11.7e-0856.94unknown [Zea mays][more]
BLAST of Sgr022675 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr022675 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
C0PEK48.1e-0956.94Uncharacterized protein OS=Zea mays OX=4577 PE=2 SV=1[more]
A0A3Q7GJ256.8e-0862.07Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1[more]
A0A0A9RRQ22.0e-0757.14Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A0A9JVL45.8e-0755.56LDL1 OS=Arundo donax OX=35708 PE=4 SV=1[more]
BLAST of Sgr022675 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr022675.1Sgr022675.1mRNA