Sgr022668 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr022668
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	protein RNA-directed DNA methylation 3
Location	tig00000289: 2137835 .. 2138431 (-)
RNA-Seq Expression	Sgr022668
Synteny	Sgr022668

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCCAAGGGCAAGGGGATTGCCAAAGATTCATCCTCTGGAAAGCGGAAGCATCGCGATGACAATACCACCGCCGCTCTCGCCCGTAAGAGGCTGGACCGGAGCGTTCTTCAGTTCTTCGAGGACGTCGCTCCGGAGGTCGGCGGCGAAAGTGACGATAGTGATTTTGACGATGGTAGATTCTCTCTCCTTTTCTTTTACTTCTCATCATTGTTTTCGTCTCTTTTGGGGGTTCGGAGAATTGTTTCTGTTTGGGAGCTTGTTATTTTCATATTTTTGCTCTACATTTTGTTCTGTCTTGATATTTTGGGGTCATTTTTTCTTATACTACCAATGCACAGTAATTGGTGGAAATGGTCACATTTAGGCCCGTTTGTTCCTCCTCGAATATCCGCTTAAGATCCTTTTCCTTATTTGAACAAGCTTGTTACATTACAAATTTTACTCGAACGGGTTGAGAGACGTCTGTCTCATTCTATAGGTTGATGATAATTTTGACATATTTGCTGAACATGCGGACAGGTTCCCGCTGATAGTAGGCTTCTAGCGAGATCGATCGAAGTCGCTAGAGTGCATCTGCTGCGGCTTCTCTGA

mRNA sequence

ATGGCGTCCAAGGGCAAGGGGATTGCCAAAGATTCATCCTCTGGAAAGCGGAAGCATCGCGATGACAATACCACCGCCGCTCTCGCCCGTAAGAGGCTGGACCGGAGCGTTCTTCAGTTCTTCGAGGACGTCGCTCCGGAGGTCGGCGGCGAAAGTGACGATAGTGATTTTGACGATGGTAGATTCTCTCTCCTTTTCTTTTACTTCTCATCATTGTTTTCGTCTCTTTTGGGGGTTCCCGCTGATAGTAGGCTTCTAGCGAGATCGATCGAAGTCGCTAGAGTGCATCTGCTGCGGCTTCTCTGA

Coding sequence (CDS)

ATGGCGTCCAAGGGCAAGGGGATTGCCAAAGATTCATCCTCTGGAAAGCGGAAGCATCGCGATGACAATACCACCGCCGCTCTCGCCCGTAAGAGGCTGGACCGGAGCGTTCTTCAGTTCTTCGAGGACGTCGCTCCGGAGGTCGGCGGCGAAAGTGACGATAGTGATTTTGACGATGGTAGATTCTCTCTCCTTTTCTTTTACTTCTCATCATTGTTTTCGTCTCTTTTGGGGGTTCCCGCTGATAGTAGGCTTCTAGCGAGATCGATCGAAGTCGCTAGAGTGCATCTGCTGCGGCTTCTCTGA

Protein sequence

MASKGKGIAKDSSSGKRKHRDDNTTAALARKRLDRSVLQFFEDVAPEVGGESDDSDFDDGRFSLLFFYFSSLFSSLLGVPADSRLLARSIEVARVHLLRLL

Homology

[Close]

BLAST of Sgr022668 vs. NCBI nr
Match: XP_022133448.1 (protein RNA-directed DNA methylation 3, partial [Momordica charantia])

HSP 1 Score: 96.3 bits (238), Expect = 1.6e-16
Identity = 51/59 (86.44%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 1  MASKGKGIAKDSSSGKRKHRDDNTTAALARKRLDRSVLQFFEDVAPEVGGESDDSDFDD 60
          MASKGKGIAKD+SSGKRK R+DN  A LARKR DRSVLQFFEDVAPEVGGESDDSDF D
Sbjct: 1  MASKGKGIAKDTSSGKRKQREDNNGADLARKRRDRSVLQFFEDVAPEVGGESDDSDFLD 59

[Close]

BLAST of Sgr022668 vs. NCBI nr
Match: TYJ99969.1 (protein RNA-directed DNA methylation 3 [Cucumis melo var. makuwa])

HSP 1 Score: 93.2 bits (230), Expect = 1.4e-15
Identity = 51/59 (86.44%), Postives = 54/59 (91.53%), Query Frame = 0


Query: 1  MASKGKGIAKDSSSGKRKHRDDNTTAALARKRLDRSVLQFFEDVAPEVGGESDDSDFDD 60
          MASKGKGIAKDS SGKRK RDDNT++A ARKR DR+VLQFFEDVAPEVGGESDDSDF D
Sbjct: 1  MASKGKGIAKDSPSGKRKLRDDNTSSA-ARKRRDRNVLQFFEDVAPEVGGESDDSDFFD 58

[Close]

BLAST of Sgr022668 vs. NCBI nr
Match: XP_022992957.1 (protein RNA-directed DNA methylation 3-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 91.7 bits (226), Expect = 4.0e-15
Identity = 50/60 (83.33%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 1  MASKGKGIAKDSSSGKRKHRDDNTTAALARKRLDRSVLQFFEDVAPEVGGESDDSDFDDG 60
          MASKGKGIAKD+S GKRK RDDN ++A ARKR DRSVLQFFEDVAPE GGESDDSDF DG
Sbjct: 1  MASKGKGIAKDASPGKRKLRDDNNSSA-ARKRRDRSVLQFFEDVAPEFGGESDDSDFFDG 59

[Close]

BLAST of Sgr022668 vs. NCBI nr
Match: XP_023551512.1 (protein RNA-directed DNA methylation 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 91.7 bits (226), Expect = 4.0e-15
Identity = 50/60 (83.33%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 1  MASKGKGIAKDSSSGKRKHRDDNTTAALARKRLDRSVLQFFEDVAPEVGGESDDSDFDDG 60
          MASKGKGIAKD+S GKRK RDDN ++A ARKR DRSVLQFFEDVAPE GGESDDSDF DG
Sbjct: 1  MASKGKGIAKDASPGKRKLRDDNNSSA-ARKRRDRSVLQFFEDVAPEFGGESDDSDFFDG 59

[Close]

BLAST of Sgr022668 vs. NCBI nr
Match: XP_022992956.1 (protein RNA-directed DNA methylation 3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 91.7 bits (226), Expect = 4.0e-15
Identity = 50/60 (83.33%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 1  MASKGKGIAKDSSSGKRKHRDDNTTAALARKRLDRSVLQFFEDVAPEVGGESDDSDFDDG 60
          MASKGKGIAKD+S GKRK RDDN ++A ARKR DRSVLQFFEDVAPE GGESDDSDF DG
Sbjct: 1  MASKGKGIAKDASPGKRKLRDDNNSSA-ARKRRDRSVLQFFEDVAPEFGGESDDSDFFDG 59

[Close]

BLAST of Sgr022668 vs. ExPASy TrEMBL
Match: A0A6J1BZ56 (protein RNA-directed DNA methylation 3 OS=Momordica charantia OX=3673 GN=LOC111006022 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.9e-17
Identity = 51/59 (86.44%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 1  MASKGKGIAKDSSSGKRKHRDDNTTAALARKRLDRSVLQFFEDVAPEVGGESDDSDFDD 60
          MASKGKGIAKD+SSGKRK R+DN  A LARKR DRSVLQFFEDVAPEVGGESDDSDF D
Sbjct: 1  MASKGKGIAKDTSSGKRKQREDNNGADLARKRRDRSVLQFFEDVAPEVGGESDDSDFLD 59

[Close]

BLAST of Sgr022668 vs. ExPASy TrEMBL
Match: A0A5D3BLU8 (Protein RNA-directed DNA methylation 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00100 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 6.7e-16
Identity = 51/59 (86.44%), Postives = 54/59 (91.53%), Query Frame = 0


Query: 1  MASKGKGIAKDSSSGKRKHRDDNTTAALARKRLDRSVLQFFEDVAPEVGGESDDSDFDD 60
          MASKGKGIAKDS SGKRK RDDNT++A ARKR DR+VLQFFEDVAPEVGGESDDSDF D
Sbjct: 1  MASKGKGIAKDSPSGKRKLRDDNTSSA-ARKRRDRNVLQFFEDVAPEVGGESDDSDFFD 58

[Close]

BLAST of Sgr022668 vs. ExPASy TrEMBL
Match: A0A6J1JRE1 (protein RNA-directed DNA methylation 3-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111489134 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.9e-15
Identity = 50/60 (83.33%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 1  MASKGKGIAKDSSSGKRKHRDDNTTAALARKRLDRSVLQFFEDVAPEVGGESDDSDFDDG 60
          MASKGKGIAKD+S GKRK RDDN ++A ARKR DRSVLQFFEDVAPE GGESDDSDF DG
Sbjct: 1  MASKGKGIAKDASPGKRKLRDDNNSSA-ARKRRDRSVLQFFEDVAPEFGGESDDSDFFDG 59

[Close]

BLAST of Sgr022668 vs. ExPASy TrEMBL
Match: A0A6J1JYW2 (protein RNA-directed DNA methylation 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489134 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.9e-15
Identity = 50/60 (83.33%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 1  MASKGKGIAKDSSSGKRKHRDDNTTAALARKRLDRSVLQFFEDVAPEVGGESDDSDFDDG 60
          MASKGKGIAKD+S GKRK RDDN ++A ARKR DRSVLQFFEDVAPE GGESDDSDF DG
Sbjct: 1  MASKGKGIAKDASPGKRKLRDDNNSSA-ARKRRDRSVLQFFEDVAPEFGGESDDSDFFDG 59

[Close]

BLAST of Sgr022668 vs. ExPASy TrEMBL
Match: A0A6J1JV02 (protein RNA-directed DNA methylation 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489134 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.9e-15
Identity = 50/60 (83.33%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 1  MASKGKGIAKDSSSGKRKHRDDNTTAALARKRLDRSVLQFFEDVAPEVGGESDDSDFDDG 60
          MASKGKGIAKD+S GKRK RDDN ++A ARKR DRSVLQFFEDVAPE GGESDDSDF DG
Sbjct: 1  MASKGKGIAKDASPGKRKLRDDNNSSA-ARKRRDRSVLQFFEDVAPEFGGESDDSDFFDG 59

The following BLAST results are available for this feature:

BLAST of Sgr022668 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133448.1	1.6e-16	86.44	protein RNA-directed DNA methylation 3, partial [Momordica charantia]	[more]
TYJ99969.1	1.4e-15	86.44	protein RNA-directed DNA methylation 3 [Cucumis melo var. makuwa]	[more]
XP_022992957.1	4.0e-15	83.33	protein RNA-directed DNA methylation 3-like isoform X3 [Cucurbita maxima]	[more]
XP_023551512.1	4.0e-15	83.33	protein RNA-directed DNA methylation 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022992956.1	4.0e-15	83.33	protein RNA-directed DNA methylation 3-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Sgr022668 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr022668 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZ56	7.9e-17	86.44	protein RNA-directed DNA methylation 3 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A5D3BLU8	6.7e-16	86.44	Protein RNA-directed DNA methylation 3 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1JRE1	1.9e-15	83.33	protein RNA-directed DNA methylation 3-like isoform X3 OS=Cucurbita maxima OX=36...	[more]
A0A6J1JYW2	1.9e-15	83.33	protein RNA-directed DNA methylation 3-like isoform X1 OS=Cucurbita maxima OX=36...	[more]
A0A6J1JV02	1.9e-15	83.33	protein RNA-directed DNA methylation 3-like isoform X2 OS=Cucurbita maxima OX=36...	[more]

BLAST of Sgr022668 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..24

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr022668.1	Sgr022668.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032784	regulation of DNA-templated transcription, elongation
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus