Sgr022476 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr022476
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	NADH dehydrogenase subunit
Location	tig00154740: 86473 .. 87191 (+)
RNA-Seq Expression	Sgr022476
Synteny	Sgr022476

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTACACGAAAGCGCCGCTTTCTCTGTAGTGTTGTCACACAGCAGCCCGCCTAGAAGAGCCACTCGCTCTGTAGTGTTGTCACATAAGATAAGCACGCCGCCCGCCTGCTGGCCGGGCGAATCGAAGTTCTCTTCCGGTCAACTGTCCACCCAGTCAAGTGCAAAAAACACAGTAGAATCACGCAAGGCACGCAGCTGGTGTGCTTCCTGCCCGCGAGGAAAGAAAGAAGAGCGACAGGGTTGAGTTCAGATTTGACTGTTTGCAGCATGGGAGCGGATTACCCAAAAAATCCCTGGGAACAATGAAAAAAAAGATATCTCGGTAACGAAAACTATGGGGGGCTGTATTGGCGAGATCCAACGGTGAACAGCTGCCCAAAAGAAAAACCGCCTGGAAGTCCGAGGACCTTTAGTACCGTACCCTACCCCCAAACCAGCAGCCTTCGCGCCAAGCAAGACCGCCCTTGTCCCTTTCCTTTCTCCATTCCGCCTCCTTCTTTCTTAGCTTTGTTCCAATCGAGTCTAAGGCAAAGCAAAAGTGGTTCGTATACCTATTTTTTTACCTACTTGACGAAAGGGAACGAACTTTGTTTCGTTTCCGGGTTTATGGATTGGATTCAGTCAGCTAAACTCATTCCTTTTTATTATGTTGTGACGCTTTGGTTACCGGCGAACGCTTCCAAAGGCGACCCTCTCGAGTTTCCGGCGGTTTCCTAG

mRNA sequence

ATGTTACACGAAAGCGCCGCTTTCTCTGTAGTGTTGTCACACAGCAGCCCGCCTAGAAGAGCCACTCGCTCTGTAGTGTTGTCACATAAGATAAGCACGCCGCCCGCCTGCTGGCCGGGCGAATCGAAGTTCTCTTCCGGTCAACTGTCCACCCAGTCAAGTGCAAAAAACACAGTAGAATCACGCAAGGCACGCAGCTGGTGTGCTTCCTGCCCGCGAGGAAAGAAAGAAGAGCGACAGGATCCAACGGTGAACAGCTGCCCAAAAGAAAAACCGCCTGGAAGTCCGAGGACCTTTAGTACCGTACCCTACCCCCAAACCAGCAGCCTTCGCGCCAAGCAAGACCGCCCTTGTCCCTTTCCTTTCTCCATTCCGCCTCCTTCTTTCTTAGCTTTGTTCCAATCGAGTCTAAGGCAAAGCAAAAGTGGTTCGTATACCTATTTTTTTACCTACTTGACGAAAGGGAACGAACTTTGTTTCGTTTCCGGGTTTATGGATTGGATTCAGTCAGCTAAACTCATTCCTTTTTATTATGTTGTGACGCTTTGGTTACCGGCGAACGCTTCCAAAGGCGACCCTCTCGAGTTTCCGGCGGTTTCCTAG

Coding sequence (CDS)

ATGTTACACGAAAGCGCCGCTTTCTCTGTAGTGTTGTCACACAGCAGCCCGCCTAGAAGAGCCACTCGCTCTGTAGTGTTGTCACATAAGATAAGCACGCCGCCCGCCTGCTGGCCGGGCGAATCGAAGTTCTCTTCCGGTCAACTGTCCACCCAGTCAAGTGCAAAAAACACAGTAGAATCACGCAAGGCACGCAGCTGGTGTGCTTCCTGCCCGCGAGGAAAGAAAGAAGAGCGACAGGATCCAACGGTGAACAGCTGCCCAAAAGAAAAACCGCCTGGAAGTCCGAGGACCTTTAGTACCGTACCCTACCCCCAAACCAGCAGCCTTCGCGCCAAGCAAGACCGCCCTTGTCCCTTTCCTTTCTCCATTCCGCCTCCTTCTTTCTTAGCTTTGTTCCAATCGAGTCTAAGGCAAAGCAAAAGTGGTTCGTATACCTATTTTTTTACCTACTTGACGAAAGGGAACGAACTTTGTTTCGTTTCCGGGTTTATGGATTGGATTCAGTCAGCTAAACTCATTCCTTTTTATTATGTTGTGACGCTTTGGTTACCGGCGAACGCTTCCAAAGGCGACCCTCTCGAGTTTCCGGCGGTTTCCTAG

Protein sequence

MLHESAAFSVVLSHSSPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVESRKARSWCASCPRGKKEERQDPTVNSCPKEKPPGSPRTFSTVPYPQTSSLRAKQDRPCPFPFSIPPPSFLALFQSSLRQSKSGSYTYFFTYLTKGNELCFVSGFMDWIQSAKLIPFYYVVTLWLPANASKGDPLEFPAVS

Homology

[Close]

BLAST of Sgr022476 vs. NCBI nr
Match: KAF4348298.1 (hypothetical protein F8388_020603 [Cannabis sativa])

HSP 1 Score: 219.9 bits (559), Expect = 1.9e-53
Identity = 114/139 (82.01%), Postives = 118/139 (84.89%), Query Frame = 0


Query: 1   MLHESAAFSVVLSHSSPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE 60
           MLHESAAFSVVLSHS PPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE
Sbjct: 1   MLHESAAFSVVLSHSCPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE 60

Query: 61  SRKARSWCASCPRGKKEERQDPTVNSCPKEKPPGSPRTFSTVPYPQTSSLRAKQDRPCPF 120
           SR AR W            +DPTVNSCPKEKPPGSPRTFSTVPYP+TSSLRAKQDRPCPF
Sbjct: 61  SRNARCWGLYW--------RDPTVNSCPKEKPPGSPRTFSTVPYPRTSSLRAKQDRPCPF 120

Query: 121 PFSIPPPSFLALFQSSLRQ 140
           PFSIPPPSF    +S  +Q
Sbjct: 121 PFSIPPPSFFVPIESKAKQ 131

[Close]

BLAST of Sgr022476 vs. NCBI nr
Match: KZV35421.1 (NADH dehydrogenase subunit [Dorcoceras hygrometricum])

HSP 1 Score: 189.5 bits (480), Expect = 2.8e-44
Identity = 118/215 (54.88%), Postives = 125/215 (58.14%), Query Frame = 0


Query: 1   MLHESAAFSVVLSHSSPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE 60
           MLHESAAFSVVLSHS PPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE
Sbjct: 1   MLHESAAFSVVLSHSCPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE 60

Query: 61  SRKARSWCASCPRGKKEER-------------------------------------QDPT 120
           SR AR WCASC +GKK ++                                     +DPT
Sbjct: 61  SRNARCWCASCSQGKKSDKVQILLFAAWEQITQKIPGNNEKRKRYLGNENYRGLYWRDPT 120

Query: 121 VNSCPKEKPPGSPRTFSTVPYPQTSSLRAKQDRPCPFPFSIPPPSFLALFQSSLRQ---- 172
           VNSCPKEKPPGSPRTF           +     P  F    P  + L LF S  R     
Sbjct: 121 VNSCPKEKPPGSPRTF-----------KYSTSEPAAF---APSRTALVLFLSPFRLLLCF 180

[Close]

BLAST of Sgr022476 vs. NCBI nr
Match: KAA0043460.1 (NADH dehydrogenase subunit [Cucumis melo var. makuwa] >TYK11633.1 NADH dehydrogenase subunit [Cucumis melo var. makuwa])

HSP 1 Score: 157.9 bits (398), Expect = 9.0e-35
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MLHESAAFSVVLSHSSPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE 60
          MLHESAAFSVVLSHSSPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE
Sbjct: 1  MLHESAAFSVVLSHSSPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE 60

Query: 61 SRKARSWCASCPRGKKEERQ 81
          SRKARSWCASCPRGKKEERQ
Sbjct: 61 SRKARSWCASCPRGKKEERQ 80

[Close]

BLAST of Sgr022476 vs. NCBI nr
Match: KAF4352129.1 (hypothetical protein G4B88_015039 [Cannabis sativa])

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-32
Identity = 76/80 (95.00%), Postives = 77/80 (96.25%), Query Frame = 0


Query: 1  MLHESAAFSVVLSHSSPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE 60
          MLHESAAFSVVLSHS PPRRATRSVVLSHKISTPPACWPG+SKFSSGQLSTQSSAKNTVE
Sbjct: 1  MLHESAAFSVVLSHSCPPRRATRSVVLSHKISTPPACWPGKSKFSSGQLSTQSSAKNTVE 60

Query: 61 SRKARSWCASCPRGKKEERQ 81
          SR AR WCASCPRGKKEERQ
Sbjct: 61 SRNARCWCASCPRGKKEERQ 80

[Close]

BLAST of Sgr022476 vs. NCBI nr
Match: YP_010035137.1 (orf121 [Euonymus alatus] >QOX10160.1 orf121 [Euonymus alatus])

HSP 1 Score: 149.8 bits (377), Expect = 2.5e-32
Identity = 76/80 (95.00%), Postives = 77/80 (96.25%), Query Frame = 0


Query: 1  MLHESAAFSVVLSHSSPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE 60
          MLHESAAFSVVLSHS PPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE
Sbjct: 1  MLHESAAFSVVLSHSCPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE 60

Query: 61 SRKARSWCASCPRGKKEERQ 81
          SRKAR WCASCPRGKKE+ Q
Sbjct: 61 SRKARCWCASCPRGKKEKLQ 80

[Close]

BLAST of Sgr022476 vs. ExPASy TrEMBL
Match: A0A7J6DQD4 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_020603 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 9.3e-54
Identity = 114/139 (82.01%), Postives = 118/139 (84.89%), Query Frame = 0


Query: 1   MLHESAAFSVVLSHSSPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE 60
           MLHESAAFSVVLSHS PPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE
Sbjct: 1   MLHESAAFSVVLSHSCPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE 60

Query: 61  SRKARSWCASCPRGKKEERQDPTVNSCPKEKPPGSPRTFSTVPYPQTSSLRAKQDRPCPF 120
           SR AR W            +DPTVNSCPKEKPPGSPRTFSTVPYP+TSSLRAKQDRPCPF
Sbjct: 61  SRNARCWGLYW--------RDPTVNSCPKEKPPGSPRTFSTVPYPRTSSLRAKQDRPCPF 120

Query: 121 PFSIPPPSFLALFQSSLRQ 140
           PFSIPPPSF    +S  +Q
Sbjct: 121 PFSIPPPSFFVPIESKAKQ 131

[Close]

BLAST of Sgr022476 vs. ExPASy TrEMBL
Match: A0A2Z7BLG1 (NADH dehydrogenase subunit OS=Dorcoceras hygrometricum OX=472368 GN=F511_37264 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.4e-44
Identity = 118/215 (54.88%), Postives = 125/215 (58.14%), Query Frame = 0


Query: 1   MLHESAAFSVVLSHSSPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE 60
           MLHESAAFSVVLSHS PPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE
Sbjct: 1   MLHESAAFSVVLSHSCPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE 60

Query: 61  SRKARSWCASCPRGKKEER-------------------------------------QDPT 120
           SR AR WCASC +GKK ++                                     +DPT
Sbjct: 61  SRNARCWCASCSQGKKSDKVQILLFAAWEQITQKIPGNNEKRKRYLGNENYRGLYWRDPT 120

Query: 121 VNSCPKEKPPGSPRTFSTVPYPQTSSLRAKQDRPCPFPFSIPPPSFLALFQSSLRQ---- 172
           VNSCPKEKPPGSPRTF           +     P  F    P  + L LF S  R     
Sbjct: 121 VNSCPKEKPPGSPRTF-----------KYSTSEPAAF---APSRTALVLFLSPFRLLLCF 180

[Close]

BLAST of Sgr022476 vs. ExPASy TrEMBL
Match: A0A5D3CI95 (NADH dehydrogenase subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83708G00020 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 4.4e-35
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MLHESAAFSVVLSHSSPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE 60
          MLHESAAFSVVLSHSSPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE
Sbjct: 1  MLHESAAFSVVLSHSSPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE 60

Query: 61 SRKARSWCASCPRGKKEERQ 81
          SRKARSWCASCPRGKKEERQ
Sbjct: 61 SRKARSWCASCPRGKKEERQ 80

[Close]

BLAST of Sgr022476 vs. ExPASy TrEMBL
Match: A0A7J6E368 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_015039 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 7.0e-33
Identity = 76/80 (95.00%), Postives = 77/80 (96.25%), Query Frame = 0


Query: 1  MLHESAAFSVVLSHSSPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE 60
          MLHESAAFSVVLSHS PPRRATRSVVLSHKISTPPACWPG+SKFSSGQLSTQSSAKNTVE
Sbjct: 1  MLHESAAFSVVLSHSCPPRRATRSVVLSHKISTPPACWPGKSKFSSGQLSTQSSAKNTVE 60

Query: 61 SRKARSWCASCPRGKKEERQ 81
          SR AR WCASCPRGKKEERQ
Sbjct: 61 SRNARCWCASCPRGKKEERQ 80

[Close]

BLAST of Sgr022476 vs. ExPASy TrEMBL
Match: A0A484MZI2 (Uncharacterized protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS31871 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.0e-31
Identity = 80/94 (85.11%), Postives = 81/94 (86.17%), Query Frame = 0


Query: 1  MLHESAAFSVVLSHSSPPRRATRSVVLSHKISTPPACWPGESKFSSGQLSTQSSAKNTVE 60
          MLHESAAFSVVLSHS PPRRATRSVVLSHKISTPPACWPGESK SSGQLSTQSSAKNTVE
Sbjct: 1  MLHESAAFSVVLSHSCPPRRATRSVVLSHKISTPPACWPGESKLSSGQLSTQSSAKNTVE 60

Query: 61 SRKARSWCASCPRGKKEERQ--DPTVNSCPKEKP 93
          SR AR WCASC RGKKEERQ  D TV S   + P
Sbjct: 61 SRNARCWCASCSRGKKEERQGSDFTVCSMGADSP 94

The following BLAST results are available for this feature:

BLAST of Sgr022476 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF4348298.1	1.9e-53	82.01	hypothetical protein F8388_020603 [Cannabis sativa]	[more]
KZV35421.1	2.8e-44	54.88	NADH dehydrogenase subunit [Dorcoceras hygrometricum]	[more]
KAA0043460.1	9.0e-35	100.00	NADH dehydrogenase subunit [Cucumis melo var. makuwa] >TYK11633.1 NADH dehydroge...	[more]
KAF4352129.1	1.4e-32	95.00	hypothetical protein G4B88_015039 [Cannabis sativa]	[more]
YP_010035137.1	2.5e-32	95.00	orf121 [Euonymus alatus] >QOX10160.1 orf121 [Euonymus alatus]	[more]

BLAST of Sgr022476 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr022476 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J6DQD4	9.3e-54	82.01	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_020603 PE=4 SV=1	[more]
A0A2Z7BLG1	1.4e-44	54.88	NADH dehydrogenase subunit OS=Dorcoceras hygrometricum OX=472368 GN=F511_37264 P...	[more]
A0A5D3CI95	4.4e-35	100.00	NADH dehydrogenase subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A7J6E368	7.0e-33	95.00	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_015039 PE=4 SV=1	[more]
A0A484MZI2	1.0e-31	85.11	Uncharacterized protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS31871 PE=4 ...	[more]

BLAST of Sgr022476 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr022476.1	Sgr022476.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion