Sgr022284 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr022284
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	40S ribosomal protein S3-2-like
Location	tig00154107: 142423 .. 144940 (+)
RNA-Seq Expression	Sgr022284
Synteny	Sgr022284

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATTTATTTGTGCTGAAATCTAAGAACAAATCTCGTCCGCTCATTTTCAAAACCCTAGATCCAAATCTGCTATCTCAATCTGATATCATTTGCATGCAGCCGTATAAAGTTCAATCTGCGCCAGCGGCCTCTCTTCCACCGGAACGCGCGCAGCTCAGAGCCTTCCCTTCTCATAACTCAGATCTTTTCCGCGCGGCTTCGCTGCTCTCTTTCCAATCTCTCTTTGAAAATGTCGACCCAGATGAGTAAGAAGAGAAAGGTCAGTCCACGAAATTTCTTAATGTATGCTTCTTTACTCACCATCTCTACAACGATTGATCTGTTCTGTTTTGTATTGGTTATGTTTTTTGTTCGATTTTGCTGCAGTTCGTAGCGGATGGAGTGTTTTTTGCCGAGCTAAACGAGGTTTTGACCAGAGAATTGGCCGAGGATGGGTACTCCGGAGTCGAGGTTAGGGTCACTCCTATGCGCACTGAGATCATCATTCGAGCCACCCGCACCCAAAACGTTCTCGGTTAGTTTTCCTTGATTTTGAAATTCAGTTGATTAAACAGCTTTCCTTTTTCGTTTAATGGATTAAACGTCTTAGATTAACAGTCATCGATTTTGCTTTAGTAATTTTTTTCGAAAATTTTATTTGTTTATATAGGAGAAAAGGGTAGGAGAATTAGGGAGCTGACCTCGGTTGTGCAGAAGAGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTTTATGCCGAGAAAGTTAACAATAGAGGACTTTGTGCCATTGCCCAAGCCGAGTCTCTTCGCTATAAGTTACTTGGTGGCCTTGCTGTGCGGAGGTACTTTTTTCTTTTCCTTTCCCTTAGTATTATTGTTTTTATTTGCTTGATTTTGACTTGGAAATGGAACTATGATTTATGATAATGAAAGAATAAAGATCACAGATTCCTTCTTTTCTTGCACATAGCTCTGATATATGGCACTAGTTTGTTCTATTTGACTATTCTATCAATCTCATTTGAAGGGATGACTTCGTTGTAGGTTCATAAGAGTTGGTTATGTTTTTCCTGGTTCTTTTTTCTGTCATCTACAAAGCAAATTGGTGTTTTGGTACCAACTTTGTGTCGGAAGGTGACAATATTAATTGCTCTTCCATTTGATCGTCATTGTGGAATCATTTTGTTTTCACACTGTAACCTTAGGGAGGAGACATACCTGGTGTGTGGTGGTATCTTTAAGCCTCCTTATTCTTTAACTTGTGATTTCTCTGTCTCTTCCTGTCACAATGTTTTAGAAGGCTAAAGCCAGTTTTGATACTTTTTCTCTTGAAGAGTCTAGGCATAAGCCTCAATTTTAATAAAACATTATAAAATCATAAAAATGTACATTCAAGTATTATTAAGCACAATGAATGATTGTATGAAAGGGCAAAAAAAAAAATCTCACCTATCCATTGTCACTTTAAAAAAAAAGATTCTACAAGATCGTTCTTAACATCATTATTATCCCTAATAGATCGACTTAATCTTTAAACTGTTGTCTTCCATGTATTTTTAAATCTAGGTGGTGAAAGTAGTAATAGGGTGAATTACCACAAGGTTCACACTCATAATGTATTAGCATTTTATATACACACACAGGAACTCTTATATTTTTGAGGAATGGGTAAATTTATATTATCCTTTTGATATAAATTTGAGCCTTAGTGTGTAGGCGAGCCTCAAGGTGTAAGCCTCAAAAGCCTTTTAAAACATTGCCTGTTATTTGCCAGAAAGTTTGATTTTTGTGCTTTTCATAATCTGTGGTGTCCTCCTTTATTATTATCTCCAAGGTAGTCTTGCCTGCAAGACTTGGCCCTTCTATTAATAGTTTTAAGACGTCAAAGTTTATTGATTTTGAGTCTATGATGCCATTTTATTAATCTTCTGACTACGCTATTATGAGTGGGAGTATGAAATATTACTTCAGATGAGTCAGCATGCTCATATATACACTTTTTCCATCAGGGCATGCTATGGTGTTCTGAGATTTGTCATGGAAAGTGGAGCAAAGGGTTGCGAGGTTAGCTTGTAGCTCTATCCATTATTGTCTCTATATGAAAAATTCTTGTAGGGATGTTTACATGGTAATTCTCAATATTCAAACAGGTGATTGTTAGTGGAAAACTCAGGGCACAGCGTGCCAAGTCAATGAAGTTCAAAGATGGATATATGATATCTTCGGGTCAACCAGTCAGAGATTATATTGACTCAGCTGTTAGACATGTTCTTCTCAGACAGGTTAGCTTTGAGTGGTCATAAGAAGGCTTACAAGGTACATTCTGTCGGTTTCAGCTAATGTTATTGTTTTTGTGGCTCAGGGAGTTCTGGGTATCAAAGTTAAGATAATGCTTGATTGGGATCCGAAGGGCAAGCAAGGCCCCACCACCCCTCTCCCTGATGTTGTCACCATCCACCCTCCCAAGGAGGAGGAAGAAATCGTCCATAGACCACCAATTTTGACCACTGATATTGAGGTTCCGGTAGTAGCTTGA

mRNA sequence

ATGCATTTATTTGTGCTGAAATCTAAGAACAAATCTCGTCCGCTCATTTTCAAAACCCTAGATCCAAATCTGCTATCTCAATCTGATATCATTTGCATGCAGCCGTATAAAGTTCAATCTGCGCCAGCGGCCTCTCTTCCACCGGAACGCGCGCAGCTCAGAGCCTTCCCTTCTCATAACTCAGATCTTTTCCGCGCGGCTTCGCTGCTCTCTTTCCAATCTCTCTTTGAAAATGTCGACCCAGATGAAGAATTGGCCGAGGATGGGTACTCCGGAGTCGAGGTTAGGGTCACTCCTATGCGCACTGAGATCATCATTCGAGCCACCCGCACCCAAAACGTTCTCGGAGAAAAGGGTAGGAGAATTAGGGAGCTGACCTCGGTTGTGCAGAAGAGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTTTATGCCGAGAAAGTTAACAATAGAGGACTTTGTGCCATTGCCCAAGCCGAGTCTCTTCGCTATAAGTTACTTGGTGGCCTTGCTGTGCGGAGGGCATGCTATGGTGTTCTGAGATTTGTCATGGAAAGTGGAGCAAAGGGTTGCGAGGTGATTGTTAGTGGAAAACTCAGGGCACAGCGTGCCAAGTCAATGAAGTTCAAAGATGGATATATGATATCTTCGGGTCAACCAGTCAGAGATTATATTGACTCAGCTGTTAGACATGTTCTTCTCAGACAGGGAGTTCTGGGTATCAAAGTTAAGATAATGCTTGATTGGGATCCGAAGGGCAAGCAAGGCCCCACCACCCCTCTCCCTGATGTTGTCACCATCCACCCTCCCAAGGAGGAGGAAGAAATCGTCCATAGACCACCAATTTTGACCACTGATATTGAGGTTCCGGTAGTAGCTTGA

Coding sequence (CDS)

ATGCATTTATTTGTGCTGAAATCTAAGAACAAATCTCGTCCGCTCATTTTCAAAACCCTAGATCCAAATCTGCTATCTCAATCTGATATCATTTGCATGCAGCCGTATAAAGTTCAATCTGCGCCAGCGGCCTCTCTTCCACCGGAACGCGCGCAGCTCAGAGCCTTCCCTTCTCATAACTCAGATCTTTTCCGCGCGGCTTCGCTGCTCTCTTTCCAATCTCTCTTTGAAAATGTCGACCCAGATGAAGAATTGGCCGAGGATGGGTACTCCGGAGTCGAGGTTAGGGTCACTCCTATGCGCACTGAGATCATCATTCGAGCCACCCGCACCCAAAACGTTCTCGGAGAAAAGGGTAGGAGAATTAGGGAGCTGACCTCGGTTGTGCAGAAGAGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTTTATGCCGAGAAAGTTAACAATAGAGGACTTTGTGCCATTGCCCAAGCCGAGTCTCTTCGCTATAAGTTACTTGGTGGCCTTGCTGTGCGGAGGGCATGCTATGGTGTTCTGAGATTTGTCATGGAAAGTGGAGCAAAGGGTTGCGAGGTGATTGTTAGTGGAAAACTCAGGGCACAGCGTGCCAAGTCAATGAAGTTCAAAGATGGATATATGATATCTTCGGGTCAACCAGTCAGAGATTATATTGACTCAGCTGTTAGACATGTTCTTCTCAGACAGGGAGTTCTGGGTATCAAAGTTAAGATAATGCTTGATTGGGATCCGAAGGGCAAGCAAGGCCCCACCACCCCTCTCCCTGATGTTGTCACCATCCACCCTCCCAAGGAGGAGGAAGAAATCGTCCATAGACCACCAATTTTGACCACTGATATTGAGGTTCCGGTAGTAGCTTGA

Protein sequence

MHLFVLKSKNKSRPLIFKTLDPNLLSQSDIICMQPYKVQSAPAASLPPERAQLRAFPSHNSDLFRAASLLSFQSLFENVDPDEELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHPPKEEEEIVHRPPILTTDIEVPVVA

Homology

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BLAST of Sgr022284 vs. NCBI nr
Match: XP_022154712.1 (40S ribosomal protein S3-2-like [Momordica charantia])

HSP 1 Score: 399.4 bits (1025), Expect = 2.6e-107
Identity = 204/208 (98.08%), Postives = 206/208 (99.04%), Query Frame = 0


Query: 84  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 143
           ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY
Sbjct: 28  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 87

Query: 144 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 203
           AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA
Sbjct: 88  AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 147

Query: 204 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 263
           KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV
Sbjct: 148 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 207

Query: 264 VTIHPPKEEEEIVHRPPILTTDIEVPVV 292
           VTIH PKEEEEIVHRP IL+TDIE+PVV
Sbjct: 208 VTIHSPKEEEEIVHRPAILSTDIEIPVV 235

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BLAST of Sgr022284 vs. NCBI nr
Match: KAA0061472.1 (40S ribosomal protein S3-3 [Cucumis melo var. makuwa] >TYK10802.1 40S ribosomal protein S3-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 396.4 bits (1017), Expect = 2.2e-106
Identity = 204/208 (98.08%), Postives = 205/208 (98.56%), Query Frame = 0


Query: 84  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 143
           ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY
Sbjct: 588 ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 647

Query: 144 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 203
           AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA
Sbjct: 648 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 707

Query: 204 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 263
           KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV
Sbjct: 708 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 767

Query: 264 VTIHPPKEEEEIVHRPP-ILTTDIEVPV 291
           VTIH PKEEEEIVHRPP +LT DIEVPV
Sbjct: 768 VTIHSPKEEEEIVHRPPAVLTADIEVPV 795

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BLAST of Sgr022284 vs. NCBI nr
Match: XP_004141068.1 (40S ribosomal protein S3-2 [Cucumis sativus] >XP_008459686.1 PREDICTED: 40S ribosomal protein S3-2 [Cucumis melo] >KGN60514.1 hypothetical protein Csa_019414 [Cucumis sativus])

HSP 1 Score: 396.4 bits (1017), Expect = 2.2e-106
Identity = 204/208 (98.08%), Postives = 205/208 (98.56%), Query Frame = 0


Query: 84  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 143
           ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY
Sbjct: 28  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 87

Query: 144 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 203
           AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA
Sbjct: 88  AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 147

Query: 204 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 263
           KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV
Sbjct: 148 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 207

Query: 264 VTIHPPKEEEEIVHRPP-ILTTDIEVPV 291
           VTIH PKEEEEIVHRPP +LT DIEVPV
Sbjct: 208 VTIHSPKEEEEIVHRPPAVLTADIEVPV 235

[Close]

BLAST of Sgr022284 vs. NCBI nr
Match: XP_038890738.1 (40S ribosomal protein S3-2 [Benincasa hispida])

HSP 1 Score: 395.2 bits (1014), Expect = 4.9e-106
Identity = 204/208 (98.08%), Postives = 205/208 (98.56%), Query Frame = 0


Query: 84  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 143
           ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY
Sbjct: 28  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 87

Query: 144 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 203
           AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA
Sbjct: 88  AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 147

Query: 204 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 263
           KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV
Sbjct: 148 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 207

Query: 264 VTIHPPKEEEEIVHRP-PILTTDIEVPV 291
           VTIH PKEEEEIVHRP  +LTTDIEVPV
Sbjct: 208 VTIHSPKEEEEIVHRPAAVLTTDIEVPV 235

[Close]

BLAST of Sgr022284 vs. NCBI nr
Match: XP_023546322.1 (40S ribosomal protein S3-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394.0 bits (1011), Expect = 1.1e-105
Identity = 204/210 (97.14%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 84  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 143
           ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY
Sbjct: 28  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 87

Query: 144 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 203
           AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA
Sbjct: 88  AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 147

Query: 204 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 263
           KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV
Sbjct: 148 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 207

Query: 264 VTIHPPKEEEEIVHRP--PILTTDIEVPVV 292
           V IH PKEEEEIVHRP   +LTTDIEVPVV
Sbjct: 208 VVIHSPKEEEEIVHRPAAAVLTTDIEVPVV 237

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BLAST of Sgr022284 vs. ExPASy Swiss-Prot
Match: Q9FJA6 (40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 4.0e-95
Identity = 177/206 (85.92%), Postives = 190/206 (92.23%), Query Frame = 0


Query: 84  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 143
           ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP++SVELY
Sbjct: 28  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSLVQKRFKFPQDSVELY 87

Query: 144 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 203
           AEKV NRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RA
Sbjct: 88  AEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAARA 147

Query: 204 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 263
           KSMKFKDGYM+SSGQP ++YID+AVRHVLLRQGVLG+KVKIMLDWDPKGKQGP TPLPDV
Sbjct: 148 KSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGLKVKIMLDWDPKGKQGPMTPLPDV 207

Query: 264 VTIHPPKEEEEIVHRPPILTTDIEVP 290
           V IH PKE++  +    ++T    VP
Sbjct: 208 VIIHTPKEDDVYIAPAQVVTQAAFVP 233

[Close]

BLAST of Sgr022284 vs. ExPASy Swiss-Prot
Match: Q9M339 (40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 9.0e-95
Identity = 182/213 (85.45%), Postives = 189/213 (88.73%), Query Frame = 0


Query: 84  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 143
           ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELY
Sbjct: 28  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSLVQKRFKFPVDSVELY 87

Query: 144 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 203
           AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RA
Sbjct: 88  AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAARA 147

Query: 204 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 263
           KSMKFKDGYM+SSGQP ++YIDSAVRHVLLRQGVLGIKVK+MLDWDPKG  GP TPLPDV
Sbjct: 148 KSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQGVLGIKVKVMLDWDPKGISGPKTPLPDV 207

Query: 264 VTIHPPKEEEEI-----VHRPPILTTDIEVPVV 292
           V IH PKEEE I     V  P  L  D  +  V
Sbjct: 208 VIIHSPKEEEAIYAPAQVAAPAALVADAPLTAV 240

[Close]

BLAST of Sgr022284 vs. ExPASy Swiss-Prot
Match: Q9SIP7 (40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.3e-93
Identity = 175/197 (88.83%), Postives = 185/197 (93.91%), Query Frame = 0


Query: 84  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 143
           ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELY
Sbjct: 28  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSLVQKRFKFPVDSVELY 87

Query: 144 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 203
           AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RA
Sbjct: 88  AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAARA 147

Query: 204 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 263
           KSMKFKDGYM+SSGQP ++YID+AVRHVLLRQGVLGIKVKIMLDWDP GK GP TPLPDV
Sbjct: 148 KSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGIKVKIMLDWDPTGKSGPKTPLPDV 207

Query: 264 VTIHPPKEEEEIVHRPP 281
           V IH PK  +++V+  P
Sbjct: 208 VIIHAPK--DDVVYSAP 222

[Close]

BLAST of Sgr022284 vs. ExPASy Swiss-Prot
Match: E2RH47 (40S ribosomal protein S3 OS=Canis lupus familiaris OX=9615 GN=RPS3 PE=1 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 5.5e-84
Identity = 161/189 (85.19%), Postives = 168/189 (88.89%), Query Frame = 0


Query: 84  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 143
           ELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELY
Sbjct: 28  ELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELY 87

Query: 144 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 203
           AEKV  RGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEV+VSGKLR QRA
Sbjct: 88  AEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRA 147

Query: 204 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 263
           KSMKF DG MI SG PV  Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP  PLPD 
Sbjct: 148 KSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDH 207

Query: 264 VTIHPPKEE 273
           V+I  PK+E
Sbjct: 208 VSIVEPKDE 216

[Close]

BLAST of Sgr022284 vs. ExPASy Swiss-Prot
Match: P62908 (40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 5.5e-84
Identity = 161/189 (85.19%), Postives = 168/189 (88.89%), Query Frame = 0


Query: 84  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 143
           ELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELY
Sbjct: 28  ELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELY 87

Query: 144 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 203
           AEKV  RGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEV+VSGKLR QRA
Sbjct: 88  AEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRA 147

Query: 204 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 263
           KSMKF DG MI SG PV  Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP  PLPD 
Sbjct: 148 KSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDH 207

Query: 264 VTIHPPKEE 273
           V+I  PK+E
Sbjct: 208 VSIVEPKDE 216

[Close]

BLAST of Sgr022284 vs. ExPASy TrEMBL
Match: A0A6J1DMD4 (40S ribosomal protein S3-2-like OS=Momordica charantia OX=3673 GN=LOC111021901 PE=3 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 1.3e-107
Identity = 204/208 (98.08%), Postives = 206/208 (99.04%), Query Frame = 0


Query: 84  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 143
           ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY
Sbjct: 28  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 87

Query: 144 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 203
           AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA
Sbjct: 88  AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 147

Query: 204 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 263
           KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV
Sbjct: 148 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 207

Query: 264 VTIHPPKEEEEIVHRPPILTTDIEVPVV 292
           VTIH PKEEEEIVHRP IL+TDIE+PVV
Sbjct: 208 VTIHSPKEEEEIVHRPAILSTDIEIPVV 235

[Close]

BLAST of Sgr022284 vs. ExPASy TrEMBL
Match: A0A5A7UZY3 (40S ribosomal protein S3-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001180 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 1.1e-106
Identity = 204/208 (98.08%), Postives = 205/208 (98.56%), Query Frame = 0


Query: 84  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 143
           ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY
Sbjct: 588 ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 647

Query: 144 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 203
           AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA
Sbjct: 648 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 707

Query: 204 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 263
           KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV
Sbjct: 708 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 767

Query: 264 VTIHPPKEEEEIVHRPP-ILTTDIEVPV 291
           VTIH PKEEEEIVHRPP +LT DIEVPV
Sbjct: 768 VTIHSPKEEEEIVHRPPAVLTADIEVPV 795

[Close]

BLAST of Sgr022284 vs. ExPASy TrEMBL
Match: A0A0A0LHQ6 (KH type-2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000230 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 1.1e-106
Identity = 204/208 (98.08%), Postives = 205/208 (98.56%), Query Frame = 0


Query: 84  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 143
           ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY
Sbjct: 28  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 87

Query: 144 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 203
           AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA
Sbjct: 88  AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 147

Query: 204 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 263
           KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV
Sbjct: 148 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 207

Query: 264 VTIHPPKEEEEIVHRPP-ILTTDIEVPV 291
           VTIH PKEEEEIVHRPP +LT DIEVPV
Sbjct: 208 VTIHSPKEEEEIVHRPPAVLTADIEVPV 235

[Close]

BLAST of Sgr022284 vs. ExPASy TrEMBL
Match: A0A1S3CAV4 (40S ribosomal protein S3-2 OS=Cucumis melo OX=3656 GN=LOC103498727 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 1.1e-106
Identity = 204/208 (98.08%), Postives = 205/208 (98.56%), Query Frame = 0


Query: 84  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 143
           ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY
Sbjct: 28  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 87

Query: 144 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 203
           AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA
Sbjct: 88  AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 147

Query: 204 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 263
           KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV
Sbjct: 148 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 207

Query: 264 VTIHPPKEEEEIVHRPP-ILTTDIEVPV 291
           VTIH PKEEEEIVHRPP +LT DIEVPV
Sbjct: 208 VTIHSPKEEEEIVHRPPAVLTADIEVPV 235

[Close]

BLAST of Sgr022284 vs. ExPASy TrEMBL
Match: A0A2C9UAF1 (KH type-2 domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_16G097200 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 9.0e-106
Identity = 200/209 (95.69%), Postives = 203/209 (97.13%), Query Frame = 0


Query: 84  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 143
           ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY
Sbjct: 28  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 87

Query: 144 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 203
           AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA
Sbjct: 88  AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 147

Query: 204 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 263
           KSMKFKDGYMISSGQPV+DYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPD+
Sbjct: 148 KSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDL 207

Query: 264 VTIHPPKEEEEIVHRPPILTTDIEVPVVA 293
           VTIHPPKEEEE    PP+L TDIEVPV A
Sbjct: 208 VTIHPPKEEEEYARPPPVLATDIEVPVPA 236

[Close]

BLAST of Sgr022284 vs. TAIR 10
Match: AT5G35530.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 349.4 bits (895), Expect = 2.9e-96
Identity = 177/206 (85.92%), Postives = 190/206 (92.23%), Query Frame = 0


Query: 84  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 143
           ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP++SVELY
Sbjct: 28  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSLVQKRFKFPQDSVELY 87

Query: 144 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 203
           AEKV NRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RA
Sbjct: 88  AEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAARA 147

Query: 204 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 263
           KSMKFKDGYM+SSGQP ++YID+AVRHVLLRQGVLG+KVKIMLDWDPKGKQGP TPLPDV
Sbjct: 148 KSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGLKVKIMLDWDPKGKQGPMTPLPDV 207

Query: 264 VTIHPPKEEEEIVHRPPILTTDIEVP 290
           V IH PKE++  +    ++T    VP
Sbjct: 208 VIIHTPKEDDVYIAPAQVVTQAAFVP 233

[Close]

BLAST of Sgr022284 vs. TAIR 10
Match: AT3G53870.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 348.2 bits (892), Expect = 6.4e-96
Identity = 182/213 (85.45%), Postives = 189/213 (88.73%), Query Frame = 0


Query: 84  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 143
           ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELY
Sbjct: 28  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSLVQKRFKFPVDSVELY 87

Query: 144 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 203
           AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RA
Sbjct: 88  AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAARA 147

Query: 204 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 263
           KSMKFKDGYM+SSGQP ++YIDSAVRHVLLRQGVLGIKVK+MLDWDPKG  GP TPLPDV
Sbjct: 148 KSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQGVLGIKVKVMLDWDPKGISGPKTPLPDV 207

Query: 264 VTIHPPKEEEEI-----VHRPPILTTDIEVPVV 292
           V IH PKEEE I     V  P  L  D  +  V
Sbjct: 208 VIIHSPKEEEAIYAPAQVAAPAALVADAPLTAV 240

[Close]

BLAST of Sgr022284 vs. TAIR 10
Match: AT2G31610.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 344.4 bits (882), Expect = 9.2e-95
Identity = 175/197 (88.83%), Postives = 185/197 (93.91%), Query Frame = 0


Query: 84  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 143
           ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELY
Sbjct: 28  ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSLVQKRFKFPVDSVELY 87

Query: 144 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRA 203
           AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RA
Sbjct: 88  AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAARA 147

Query: 204 KSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDV 263
           KSMKFKDGYM+SSGQP ++YID+AVRHVLLRQGVLGIKVKIMLDWDP GK GP TPLPDV
Sbjct: 148 KSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGIKVKIMLDWDPTGKSGPKTPLPDV 207

Query: 264 VTIHPPKEEEEIVHRPP 281
           V IH PK  +++V+  P
Sbjct: 208 VIIHAPK--DDVVYSAP 222

The following BLAST results are available for this feature:

BLAST of Sgr022284 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154712.1	2.6e-107	98.08	40S ribosomal protein S3-2-like [Momordica charantia]	[more]
KAA0061472.1	2.2e-106	98.08	40S ribosomal protein S3-3 [Cucumis melo var. makuwa] >TYK10802.1 40S ribosomal ...	[more]
XP_004141068.1	2.2e-106	98.08	40S ribosomal protein S3-2 [Cucumis sativus] >XP_008459686.1 PREDICTED: 40S ribo...	[more]
XP_038890738.1	4.9e-106	98.08	40S ribosomal protein S3-2 [Benincasa hispida]	[more]
XP_023546322.1	1.1e-105	97.14	40S ribosomal protein S3-2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sgr022284 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJA6	4.0e-95	85.92	40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1	[more]
Q9M339	9.0e-95	85.45	40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1	[more]
Q9SIP7	1.3e-93	88.83	40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1	[more]
E2RH47	5.5e-84	85.19	40S ribosomal protein S3 OS=Canis lupus familiaris OX=9615 GN=RPS3 PE=1 SV=1	[more]
P62908	5.5e-84	85.19	40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1	[more]

BLAST of Sgr022284 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DMD4	1.3e-107	98.08	40S ribosomal protein S3-2-like OS=Momordica charantia OX=3673 GN=LOC111021901 P...	[more]
A0A5A7UZY3	1.1e-106	98.08	40S ribosomal protein S3-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0LHQ6	1.1e-106	98.08	KH type-2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000230 P...	[more]
A0A1S3CAV4	1.1e-106	98.08	40S ribosomal protein S3-2 OS=Cucumis melo OX=3656 GN=LOC103498727 PE=3 SV=1	[more]
A0A2C9UAF1	9.0e-106	95.69	KH type-2 domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_16G097...	[more]

BLAST of Sgr022284 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35530.1	2.9e-96	85.92	Ribosomal protein S3 family protein	[more]
AT3G53870.1	6.4e-96	85.45	Ribosomal protein S3 family protein	[more]
AT2G31610.1	9.2e-95	88.83	Ribosomal protein S3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	GENE3D	3.30.1140.32		coord: 149..275 e-value: 9.1E-67 score: 224.8
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	SUPERFAMILY	54821	Ribosomal protein S3 C-terminal domain	coord: 149..247
IPR004044	K Homology domain, type 2	PFAM	PF07650	KH_2	coord: 83..149 e-value: 2.2E-11 score: 43.4
IPR001351	Ribosomal protein S3, C-terminal	PFAM	PF00189	Ribosomal_S3_C	coord: 162..244 e-value: 3.5E-25 score: 88.3
IPR015946	K homology domain-like, alpha/beta	GENE3D	3.30.300.20		coord: 81..148 e-value: 9.3E-34 score: 117.3
IPR005703	Ribosomal protein S3, eukaryotic/archaeal	TIGRFAM	TIGR01008	TIGR01008	coord: 83..266 e-value: 3.5E-64 score: 214.1
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 83..289
None	No IPR available	PANTHER	PTHR11760:SF51	RIBOSOMAL PROTEIN S3, PUTATIVE-RELATED	coord: 83..289
None	No IPR available	CDD	cd02413	40S_S3_KH	coord: 84..151 e-value: 5.85024E-44 score: 142.746
IPR018280	Ribosomal protein S3, conserved site	PROSITE	PS00548	RIBOSOMAL_S3	coord: 203..239
IPR009019	K homology domain superfamily, prokaryotic type	SUPERFAMILY	54814	Prokaryotic type KH domain (KH-domain type II)	coord: 83..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr022284.1	Sgr022284.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome