Sgr022281 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr022281
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Mediator of RNA polymerase II transcription subunit 20
Location	tig00154107: 114383 .. 117746 (+)
RNA-Seq Expression	Sgr022281
Synteny	Sgr022281

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCCAAAGGCCATAGCAAGTACTCAAGTTTGGGCTCGTAGGCATCTTTATTCTTTCCATTGGGCCTTCCGCAAAAGTTGCAACCTGTTCCTAACCTGCTCCGACTTAACTCCGTCGTCTCGCCGCGACTTTGTACGGCCGGGACTATGCCGCTCAAATGGTAAAACCCAGAAACCTCGGGCAGAATTCTCGTCCCTTTTCGAGTGGATTTGATTCTTGATCTAGTTTACCTTGGCTTGTTTGCGTAGGGTTTTGCATTGGCAACCGAATGCCGGCAGCACTGTTAACAGTCAGATCCTCAACGAAGTTTCGCAATGTGTTGAGAGTATCCATGGCGTTAAAGGGGGCAAGTGGAAAGCTACTCTCACTTTTTACAAACCCATCTTGCGAGGTAATTGCACTCCTTTCCTACAGATGTTACGAAGAATGTCTTCCTTTTTTCTTTTTCTTGAGAGGGGGTTGTTGCCCGTTGGGATTTAATTACCTGAATGAATCTTAAATCTCTCAACAGACCAGAACTTACCGGCCGATTTCCCTCGCGACTTTCTCGGAATTTCGCTGCCGGAGCAGCCAAACAAGTATTATCTTATAATCCGTGGCCAACGGATCGTCTTAGAGGCTGATTTTACAATTCAGACTATAATGGAGAAGTTGCAGTCTTACAAATTGCGCGTTGCTCTCAATTTCGAGGTTGATTACCAAACTTTTCTAGCTCTGATGTACTCTGCTTCTTCCCATGTCCAGAAATTCAAAATTGAAGTTGATTTTGTAGCTCTCTGATCTCTACTCTTTTGCCCTTCTGTTTTTAATCGTATGCGATAAATCTTTGGTTACAGTTCCCTTATTATTTTTAGGGGTTCCAGTACCAATTAGGGGATTTCCAACTGAGAGTTGGAAAAGTTGTTCCCAGCCATTCTGAGAATTTGAGAGGAATAGTTATGGAGGTAAGGCTCGTCTCATCATTTCATGTCAACTCTGTTCTTGGGTGTTAACAATTGCATGCTCTTCTGGTTGGTTTTTTATGTCAGTATTCTTTATCTGAGCGAGCAGTTTCTTTTCCATGGGCTGCTTCAAAACAATGTTTGGTCCAGGAAGTAGTGATTTAACTCATCTTAATGCTTGATATGGCCTCTGTTATTCTCATCTTGAAAACAACGGAGAAGAAAAAGGCCAATCATCACATAGAACTTAAAGTTTCATTTTCTCTGAAGAATGTACCAAGCCTCGGAGAATGCAATTGTGATCTTATGTTGAGAAGTAGTGGATCTAATTAGGATATCTTTGCAAGCTTATGTAGTAGTTATGGAAGTCGTGATTGTGATCTTCTTCCTATTTGGTTATGTCTCATCTTTATTGTTGCACATGAATCAAAGTGTTTGAGTAAATTCCTCTCAAAGAGTTGATTTTATTGAGTTTGGAAACCATCCTTCAATTAATTTGGATACTTGATGAGAGTGTATGGTCTTTGTTTGGACTTGATTTCCATCTTCATAAACACATTACCATGTTATTTATTGAATTGATAAATCCAAGTCCAGGTAGGATATGCTATCAAGTCCGATAAAACCTGTTTCTGAGATGGATTGCATTGCATGCTGAAGTGGGAAGCCTGAAACTTCTCTAGCAAATCTATGGTTCAAGTCTGTACTTTGTTTTAATCTATTCTGATGAATATCATGTTGGAAGTATTGTTCGTCTTGGGGAGTTGGGTAAGAATCTTATGTAAGTGGGATTTAATTATAAACTTGAATCTCTGTCTTATGTGAAACATGTTAAATTTTTGTGCTGTAAAAATGAAAATTGCTCATTGCTGCTGTTCTGATGGACCATTTCGAACACTCGAGACCGTATATTGCTCGTGTTGTAGATATGCAGTAACGTATTAAATCCTGTATATTGCAGATTGAGTATCTCCCAATTTCTTCAATGGAGAAATCAAGACAGGTGATGGAGGAGTTCTTCGAGGTATGGCAAGAAGCCATGTCAAAAAGTTCATTACCAGGTCGTTTCATGCACATAGAACCAAACTTTGCAGAATATGGACTGTCGGATTACTACACTGCTCAACACACAGCCGTTCAGTATGCCAATGTGATGGCTCAACTTATTGCAACAGTGCAAGCGGTTCAATCAGTGAGAAATTAGGATAAACATGTGCTTATTTTTTCAGTTTGAGATCTGGTACTTCACGTTAGTTGTTTTTCTTCTTTTTCAAATGATGGAAGACTAGATTTGATTGAAATTGTTTGTGCTTGAAAAAGTTCAACATTGAATGGACGCCACGGTGCTGTGCTGCAAACAGAGACAGAAACTCAACGAAATCGAAATGCTTAAATTTCAAAGTGCGTCTGCCATCAACATCAGAGTAATCGCTTTTATTCAGTTGCAACAACCATGACATTGTTCATCAGAGATTAAAGCGACAATAATAGGTGGGGGCTTAGAGACTCGCCGTTTGCGACGGCGGAACTACGTAATCCACCACAATCACACTCTCCAAATGCTCCCTGACCTTCTCTTTCTGAAATTCCACCATTTCTTGGTTCGAAGCCACCGCCTCCAACTCATTCGGCCCCGCGAAAATTGCAATCGAAGCGATTGAAAATCCCTTGGCTCTCGCTGGGGAAAAATTTTCGCCAACCGTCAGCTGGGTATTCGGCCCCAATTTCTCCTTCATCCCTCTGATCACCTCCAAGATCTCATTTTTAACTTCTTCTCCCAGATTCTCCTTCAGTTTGAGGAAGGTTACTCTAACGGCAGAGCCCGGAGGTGTGGCGACCGGGCCTTGAACAGCATCGGCGATCCAATCGACGGCCATGATATCTTCGCAGATCGGAAGAACAAATTGCTTCACCACGCTCATGTGGCTGGAGTGCGCGGAATAGGCGGCGAGATCCTCCTTGGAGCTGTAGCGACTGTGAAGGAGGTGAGTGAAGTTGAAGGAGGAGGAGCGGTTGCGGAGAAGGGGACCGGCGGTGAGGTGGAGGACTTGGTCGAGGGAGATAAGGCCACTGAGTCCAGTGAGCATGTCGTTTACCTTGGAGGAATCGACGCCGTCTCTAACCTTGAAGAGGACAACGTGTTCGATGGTGTGATTGTGAGTCTGAGCCGACATGTTGAGGGAAAAGGGTGGTCTGAAGGAGGGAGAAGGGTTGAGGCGGAGGCGGAGGCGGAGGCGGCGGAGGTGTTTGGAAGGAAGCGTAGAGAAAGTGCGGAGCGCAAAGGTGAGCATTCTAACCCCAACGTCAAATGGGCGTCAAGGAATTTACCGACAGCGACCGGAGGACGAAGGACGTGCTGCGCTCAACGCCAACCTCCGATTCCGCCCAAATGGGCATCTTTTTTCCATACTCCTATTTGA

mRNA sequence

ATGGGTCCAAAGGCCATAGCAAGTACTCAAGTTTGGGCTCGTAGGCATCTTTATTCTTTCCATTGGGCCTTCCGCAAAAGTTGCAACCTGTTCCTAACCTGCTCCGACTTAACTCCGTCGTCTCGCCGCGACTTTTTTACCTTGGCTTGTTTGCGTAGGGTTTTGCATTGGCAACCGAATGCCGGCAGCACTGTTAACAGTCAGATCCTCAACGAAGTTTCGCAATGTGTTGAGAGTATCCATGGCGTTAAAGGGGGCAAGTGGAAAGCTACTCTCACTTTTTACAAACCCATCTTGCGAGACCAGAACTTACCGGCCGATTTCCCTCGCGACTTTCTCGGAATTTCGCTGCCGGAGCAGCCAAACAAGTATTATCTTATAATCCGTGGCCAACGGATCGTCTTAGAGGCTGATTTTACAATTCAGACTATAATGGAGAAGTTGCAGTCTTACAAATTGCGCGTTGCTCTCAATTTCGAGGGGTTCCAGTACCAATTAGGGGATTTCCAACTGAGAGTTGGAAAAGTTGTTCCCAGCCATTCTGAGAATTTGAGAGGAATAGTTATGGAGATTGAGTATCTCCCAATTTCTTCAATGGAGAAATCAAGACAGGTGATGGAGGAGTTCTTCGAGGTATGGCAAGAAGCCATGTCAAAAAGTTCATTACCAGGTCGTTTCATGCACATAGAACCAAACTTTGCAGAATATGGACTGTCGGATTACTACACTGCTCAACACACAGCCGTTCAGTATGCCAATGTGATGGCTCAACTTATTGCAACAGTGCAAGCGGTTCAATCACTGGGTATTCGGCCCCAATTTCTCCTTCATCCCTCTGATCACCTCCAAGATCTCATTTTTAACTTCTTCTCCCAGATTCTCCTTCAGTTTGAGGAAGGTTACTCTAACGGCAGAGCCCGGAGGTGTGGCGACCGGGCCTTGAACAGCATCGGCGATCCAATCGACGGCCATGATATCTTCGCAGATCGGAAGAACAAATTGCTTCACCACGCTCATGTGGCTGGAGTGCGCGGAATAGGCGGCGAGATCCTCCTTGGAGCTGTAGCGACTGTGAAGGAGGTGAGTGAAGTTGAAGGAGGAGGAGCGGTTGCGGAGAAGGGGACCGGCGGTGAGGTGGAGGACTTGGTCGAGGGAGATAAGGCCACTGAGTCCAGTGAGCATGTCGTTTACCTTGGAGGAATCGACGCCGTCTCTAACCTTGAAGAGGACAACGTGTTCGATGGTGTGATTGTGAGTCTGAGCCGACATGTTGAGGGAAAAGGGTGGTCTGAAGGAGGGAGAAGGGTTGAGGCGGAGGCGGAGGCGGAGGCGGCGGAGGTGTTTGGAAGGAAGCGTAGAGAAAGTGCGGAGCGCAAAGGTGAGCATTCTAACCCCAACGTCAAATGGGCGTCAAGGAATTTACCGACAGCGACCGGAGGACGAAGGACGTGCTGCGCTCAACGCCAACCTCCGATTCCGCCCAAATGGGCATCTTTTTTCCATACTCCTATTTGA

Coding sequence (CDS)

ATGGGTCCAAAGGCCATAGCAAGTACTCAAGTTTGGGCTCGTAGGCATCTTTATTCTTTCCATTGGGCCTTCCGCAAAAGTTGCAACCTGTTCCTAACCTGCTCCGACTTAACTCCGTCGTCTCGCCGCGACTTTTTTACCTTGGCTTGTTTGCGTAGGGTTTTGCATTGGCAACCGAATGCCGGCAGCACTGTTAACAGTCAGATCCTCAACGAAGTTTCGCAATGTGTTGAGAGTATCCATGGCGTTAAAGGGGGCAAGTGGAAAGCTACTCTCACTTTTTACAAACCCATCTTGCGAGACCAGAACTTACCGGCCGATTTCCCTCGCGACTTTCTCGGAATTTCGCTGCCGGAGCAGCCAAACAAGTATTATCTTATAATCCGTGGCCAACGGATCGTCTTAGAGGCTGATTTTACAATTCAGACTATAATGGAGAAGTTGCAGTCTTACAAATTGCGCGTTGCTCTCAATTTCGAGGGGTTCCAGTACCAATTAGGGGATTTCCAACTGAGAGTTGGAAAAGTTGTTCCCAGCCATTCTGAGAATTTGAGAGGAATAGTTATGGAGATTGAGTATCTCCCAATTTCTTCAATGGAGAAATCAAGACAGGTGATGGAGGAGTTCTTCGAGGTATGGCAAGAAGCCATGTCAAAAAGTTCATTACCAGGTCGTTTCATGCACATAGAACCAAACTTTGCAGAATATGGACTGTCGGATTACTACACTGCTCAACACACAGCCGTTCAGTATGCCAATGTGATGGCTCAACTTATTGCAACAGTGCAAGCGGTTCAATCACTGGGTATTCGGCCCCAATTTCTCCTTCATCCCTCTGATCACCTCCAAGATCTCATTTTTAACTTCTTCTCCCAGATTCTCCTTCAGTTTGAGGAAGGTTACTCTAACGGCAGAGCCCGGAGGTGTGGCGACCGGGCCTTGAACAGCATCGGCGATCCAATCGACGGCCATGATATCTTCGCAGATCGGAAGAACAAATTGCTTCACCACGCTCATGTGGCTGGAGTGCGCGGAATAGGCGGCGAGATCCTCCTTGGAGCTGTAGCGACTGTGAAGGAGGTGAGTGAAGTTGAAGGAGGAGGAGCGGTTGCGGAGAAGGGGACCGGCGGTGAGGTGGAGGACTTGGTCGAGGGAGATAAGGCCACTGAGTCCAGTGAGCATGTCGTTTACCTTGGAGGAATCGACGCCGTCTCTAACCTTGAAGAGGACAACGTGTTCGATGGTGTGATTGTGAGTCTGAGCCGACATGTTGAGGGAAAAGGGTGGTCTGAAGGAGGGAGAAGGGTTGAGGCGGAGGCGGAGGCGGAGGCGGCGGAGGTGTTTGGAAGGAAGCGTAGAGAAAGTGCGGAGCGCAAAGGTGAGCATTCTAACCCCAACGTCAAATGGGCGTCAAGGAATTTACCGACAGCGACCGGAGGACGAAGGACGTGCTGCGCTCAACGCCAACCTCCGATTCCGCCCAAATGGGCATCTTTTTTCCATACTCCTATTTGA

Protein sequence

MGPKAIASTQVWARRHLYSFHWAFRKSCNLFLTCSDLTPSSRRDFFTLACLRRVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPSHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTAQHTAVQYANVMAQLIATVQAVQSLGIRPQFLLHPSDHLQDLIFNFFSQILLQFEEGYSNGRARRCGDRALNSIGDPIDGHDIFADRKNKLLHHAHVAGVRGIGGEILLGAVATVKEVSEVEGGGAVAEKGTGGEVEDLVEGDKATESSEHVVYLGGIDAVSNLEEDNVFDGVIVSLSRHVEGKGWSEGGRRVEAEAEAEAAEVFGRKRRESAERKGEHSNPNVKWASRNLPTATGGRRTCCAQRQPPIPPKWASFFHTPI

Homology

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BLAST of Sgr022281 vs. NCBI nr
Match: XP_038889134.1 (mediator of RNA polymerase II transcription subunit 20a-like isoform X1 [Benincasa hispida])

HSP 1 Score: 418.7 bits (1075), Expect = 7.1e-113
Identity = 209/218 (95.87%), Postives = 215/218 (98.62%), Query Frame = 0


Query: 51  LRRVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLP-ADFP 110
           L+ VLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLP A+FP
Sbjct: 3   LKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPAAEFP 62

Query: 111 RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYKLRVALNFEGFQYQLGDF 170
           RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQ IMEKLQSYKLRVALNFEGFQYQLGDF
Sbjct: 63  RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGDF 122

Query: 171 QLRVGKVVPSHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHI 230
           QLRVGKVVP++SENLRGIVMEIEYLPISSMEKSR+VMEEFFEVWQEAMSKSSLPGRFMHI
Sbjct: 123 QLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSRKVMEEFFEVWQEAMSKSSLPGRFMHI 182

Query: 231 EPNFAEYGLSDYYTAQHTAVQYANVMAQLIATVQAVQS 268
           EPNFAEYGLSDYYT+QHTAVQYANVMAQLIATVQAVQS
Sbjct: 183 EPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQS 220

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BLAST of Sgr022281 vs. NCBI nr
Match: XP_004141069.1 (mediator of RNA polymerase II transcription subunit 20a [Cucumis sativus] >KGN60509.1 hypothetical protein Csa_019466 [Cucumis sativus])

HSP 1 Score: 412.1 bits (1058), Expect = 6.7e-111
Identity = 206/218 (94.50%), Postives = 212/218 (97.25%), Query Frame = 0


Query: 51  LRRVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLP-ADFP 110
           L+ VLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQN P A+FP
Sbjct: 3   LKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNSPAAEFP 62

Query: 111 RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYKLRVALNFEGFQYQLGDF 170
           RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQ IMEKLQSYKLRVALNFEGFQYQLGDF
Sbjct: 63  RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGDF 122

Query: 171 QLRVGKVVPSHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHI 230
           QLRVGKVVP++SENLRGIVMEIEYLPISSMEKSRQVMEEFF+VWQEAMSKSSLPGRFMHI
Sbjct: 123 QLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSRQVMEEFFDVWQEAMSKSSLPGRFMHI 182

Query: 231 EPNFAEYGLSDYYTAQHTAVQYANVMAQLIATVQAVQS 268
           E NFAEYGLSDYYT+QHTAVQY NVMAQLIATVQAVQS
Sbjct: 183 ESNFAEYGLSDYYTSQHTAVQYGNVMAQLIATVQAVQS 220

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BLAST of Sgr022281 vs. NCBI nr
Match: XP_022946745.1 (mediator of RNA polymerase II transcription subunit 20a-like [Cucurbita moschata] >XP_022999230.1 mediator of RNA polymerase II transcription subunit 20a-like [Cucurbita maxima] >XP_023546929.1 mediator of RNA polymerase II transcription subunit 20a-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546930.1 mediator of RNA polymerase II transcription subunit 20a-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG6599532.1 Mediator of RNA polymerase II transcription subunit 20a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 411.8 bits (1057), Expect = 8.7e-111
Identity = 205/218 (94.04%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 51  LRRVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPA-DFP 110
           L+ VLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRD N+ A +FP
Sbjct: 3   LKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFP 62

Query: 111 RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYKLRVALNFEGFQYQLGDF 170
           RDFLGIS+PEQPNKYYLIIRGQRIVLEADFTIQ IMEKLQSYKLRVALNFEGFQYQLGDF
Sbjct: 63  RDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGDF 122

Query: 171 QLRVGKVVPSHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHI 230
           QLRVGKVVP++SENLRGIVMEIEYLPISSMEKS+QVMEEFFEVWQEAMSKSSLPGRFMHI
Sbjct: 123 QLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHI 182

Query: 231 EPNFAEYGLSDYYTAQHTAVQYANVMAQLIATVQAVQS 268
           EPNFAEYGLSDYYT+QHTAVQYANVMAQLIATVQAVQS
Sbjct: 183 EPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQS 220

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BLAST of Sgr022281 vs. NCBI nr
Match: KAG7030510.1 (Mediator of RNA polymerase II transcription subunit 20a, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 410.6 bits (1054), Expect = 1.9e-110
Identity = 204/215 (94.88%), Postives = 211/215 (98.14%), Query Frame = 0


Query: 54  VLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPA-DFPRDF 113
           VLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRD N+ A +FPRDF
Sbjct: 36  VLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFPRDF 95

Query: 114 LGISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYKLRVALNFEGFQYQLGDFQLR 173
           LGIS+PEQPNKYYLIIRGQRIVLEADFTIQ IMEKLQSYKLRVALNFEGFQYQLGDFQLR
Sbjct: 96  LGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGDFQLR 155

Query: 174 VGKVVPSHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPN 233
           VGKVVP++SENLRGIVMEIEYLPISSMEKS+QVMEEFFEVWQEAMSKSSLPGRFMHIEPN
Sbjct: 156 VGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHIEPN 215

Query: 234 FAEYGLSDYYTAQHTAVQYANVMAQLIATVQAVQS 268
           FAEYGLSDYYT+QHTAVQYANVMAQLIATVQAVQS
Sbjct: 216 FAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQS 250

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BLAST of Sgr022281 vs. NCBI nr
Match: XP_008459711.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 20a-like isoform X1 [Cucumis melo])

HSP 1 Score: 408.3 bits (1048), Expect = 9.6e-110
Identity = 203/218 (93.12%), Postives = 211/218 (96.79%), Query Frame = 0


Query: 51  LRRVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLP-ADFP 110
           L+ VLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQN P A+FP
Sbjct: 3   LKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNSPAAEFP 62

Query: 111 RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYKLRVALNFEGFQYQLGDF 170
           RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQ IMEKLQSYKLRVALNFEGFQYQLGDF
Sbjct: 63  RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGDF 122

Query: 171 QLRVGKVVPSHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHI 230
           QLRVGKVVP++SENLRGIVMEIEYLPISSMEKSRQ+M+EFF+VWQEAMSKSSLPGRFMHI
Sbjct: 123 QLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSRQIMDEFFDVWQEAMSKSSLPGRFMHI 182

Query: 231 EPNFAEYGLSDYYTAQHTAVQYANVMAQLIATVQAVQS 268
           E NFAEYGLSD+YT QHTAVQY NVMAQLIATVQAVQS
Sbjct: 183 ESNFAEYGLSDFYTPQHTAVQYGNVMAQLIATVQAVQS 220

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BLAST of Sgr022281 vs. ExPASy Swiss-Prot
Match: Q6NPF4 (Mediator of RNA polymerase II transcription subunit 20a OS=Arabidopsis thaliana OX=3702 GN=MED20A PE=1 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 7.5e-89
Identity = 158/213 (74.18%), Postives = 188/213 (88.26%), Query Frame = 0


Query: 54  VLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPADFPRDFL 113
           VLHWQPN GSTV+SQILNE +QCVESI+GVK G+WKATL +YKP+L+DQ    +FPRDFL
Sbjct: 6   VLHWQPNQGSTVSSQILNEATQCVESINGVKEGRWKATLNYYKPMLKDQANQLEFPRDFL 65

Query: 114 GISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYKLRVALNFEGFQYQLGDFQLRV 173
           GISL +QPNKYY IIR QRIVLEAD +IQ IMEKLQSYK +VAL F+GFQYQLGDF+LRV
Sbjct: 66  GISLADQPNKYYFIIRTQRIVLEADSSIQLIMEKLQSYKSKVALYFDGFQYQLGDFRLRV 125

Query: 174 GKVVPSHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNF 233
           GKVVP+HSEN+RGIVME+EYLPISSMEK+++VMEEF E+W EA++K SLPG+F++I+ NF
Sbjct: 126 GKVVPTHSENVRGIVMEVEYLPISSMEKAQKVMEEFLEIWNEALAKRSLPGKFVNIDLNF 185

Query: 234 AEYGLSDYYTAQHTAVQYANVMAQLIATVQAVQ 267
            E+GL D YT QHTAV+YA VMA +IATVQAV+
Sbjct: 186 GEFGLGDIYTPQHTAVRYALVMAHMIATVQAVR 218

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BLAST of Sgr022281 vs. ExPASy Swiss-Prot
Match: Q9M0S0 (Mediator of RNA polymerase II transcription subunit 20b OS=Arabidopsis thaliana OX=3702 GN=MED20B PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 5.4e-79
Identity = 138/211 (65.40%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 54  VLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPADFPRDFL 113
           +LHWQPN GST +SQILNEV+Q +ES++GVK G WKATL +YKP+L+DQ   A+FPR+F+
Sbjct: 6   LLHWQPNQGSTFSSQILNEVTQSIESLNGVKEGTWKATLNYYKPMLQDQANQAEFPREFV 65

Query: 114 GISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYKLRVALNFEGFQYQLGDFQLRV 173
           GISLPE+P+KYY +IR QRIV+EAD +IQ IME LQSYK +++  FEG +YQLGDF+LRV
Sbjct: 66  GISLPEEPDKYYFVIRSQRIVVEADSSIQMIMESLQSYKCKLSFYFEGLEYQLGDFRLRV 125

Query: 174 GKVVPSHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNF 233
           GKVVP+H+E +RG+VME+EYLPISSM  ++++MEEF E+WQEAMSK SLPG+F++ E NF
Sbjct: 126 GKVVPTHAETIRGVVMEVEYLPISSMGMAKKLMEEFLEIWQEAMSKRSLPGKFVNKELNF 185

Query: 234 AEYGLSDYYTAQHTAVQYANVMAQLIATVQA 265
            ++GL D YT QHTAV YA  MA L+A +QA
Sbjct: 186 EKFGLGDNYTPQHTAVGYAFFMANLMAAIQA 216

[Close]

BLAST of Sgr022281 vs. ExPASy Swiss-Prot
Match: Q54FL3 (Putative mediator of RNA polymerase II transcription subunit 20 OS=Dictyostelium discoideum OX=44689 GN=med20 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.0e-08
Identity = 56/196 (28.57%), Postives = 92/196 (46.94%), Query Frame = 0


Query: 70  LNEVSQCVESIHGVKGGKWKATLTFYKPILRD-QNLPADFPRDFLGISLPEQPNKYYLII 129
           L E+++ +E + G+K        + Y   + D  NL    PR+F  +   E+P K + + 
Sbjct: 13  LPEMTKRIEFLGGIKVSTGTINCSLYLERVPDGSNL---IPREFHLLLYDEKPKKCFTVC 72

Query: 130 RGQRIVLEADFTIQTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPSHSENLRGIV 189
           R    ++E D  + +I+EK  SYK R        +Y+LGDF +RVG +V      +RGI+
Sbjct: 73  RD--TIVETDREMVSILEKTNSYKKRQTTEALISKYELGDFIIRVGPIV--FRTEIRGIL 132

Query: 190 MEIEY----LPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDY--- 249
           +E+EY     P++S     +++ EF          +   G F   EP    +  S Y   
Sbjct: 133 VEVEYTACSTPVTSPFNCTKLLSEFI---------NGNLGPFP--EPIQTSFDFSAYPTL 190

Query: 250 ---YTAQHTAVQYANV 255
              Y+  HT+ QY N+
Sbjct: 193 PKSYSDLHTSYQYVNL 190

[Close]

BLAST of Sgr022281 vs. ExPASy TrEMBL
Match: A0A0A0LHQ1 (Mediator of RNA polymerase II transcription subunit 20 OS=Cucumis sativus OX=3659 GN=MED20 PE=3 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 3.2e-111
Identity = 206/218 (94.50%), Postives = 212/218 (97.25%), Query Frame = 0


Query: 51  LRRVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLP-ADFP 110
           L+ VLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQN P A+FP
Sbjct: 3   LKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNSPAAEFP 62

Query: 111 RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYKLRVALNFEGFQYQLGDF 170
           RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQ IMEKLQSYKLRVALNFEGFQYQLGDF
Sbjct: 63  RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGDF 122

Query: 171 QLRVGKVVPSHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHI 230
           QLRVGKVVP++SENLRGIVMEIEYLPISSMEKSRQVMEEFF+VWQEAMSKSSLPGRFMHI
Sbjct: 123 QLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSRQVMEEFFDVWQEAMSKSSLPGRFMHI 182

Query: 231 EPNFAEYGLSDYYTAQHTAVQYANVMAQLIATVQAVQS 268
           E NFAEYGLSDYYT+QHTAVQY NVMAQLIATVQAVQS
Sbjct: 183 ESNFAEYGLSDYYTSQHTAVQYGNVMAQLIATVQAVQS 220

[Close]

BLAST of Sgr022281 vs. ExPASy TrEMBL
Match: A0A6J1KEU1 (Mediator of RNA polymerase II transcription subunit 20 OS=Cucurbita maxima OX=3661 GN=LOC111493666 PE=3 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 4.2e-111
Identity = 205/218 (94.04%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 51  LRRVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPA-DFP 110
           L+ VLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRD N+ A +FP
Sbjct: 3   LKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFP 62

Query: 111 RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYKLRVALNFEGFQYQLGDF 170
           RDFLGIS+PEQPNKYYLIIRGQRIVLEADFTIQ IMEKLQSYKLRVALNFEGFQYQLGDF
Sbjct: 63  RDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGDF 122

Query: 171 QLRVGKVVPSHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHI 230
           QLRVGKVVP++SENLRGIVMEIEYLPISSMEKS+QVMEEFFEVWQEAMSKSSLPGRFMHI
Sbjct: 123 QLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHI 182

Query: 231 EPNFAEYGLSDYYTAQHTAVQYANVMAQLIATVQAVQS 268
           EPNFAEYGLSDYYT+QHTAVQYANVMAQLIATVQAVQS
Sbjct: 183 EPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQS 220

[Close]

BLAST of Sgr022281 vs. ExPASy TrEMBL
Match: A0A6J1G4U3 (Mediator of RNA polymerase II transcription subunit 20 OS=Cucurbita moschata OX=3662 GN=LOC111450720 PE=3 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 4.2e-111
Identity = 205/218 (94.04%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 51  LRRVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPA-DFP 110
           L+ VLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRD N+ A +FP
Sbjct: 3   LKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDTNIAAGEFP 62

Query: 111 RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYKLRVALNFEGFQYQLGDF 170
           RDFLGIS+PEQPNKYYLIIRGQRIVLEADFTIQ IMEKLQSYKLRVALNFEGFQYQLGDF
Sbjct: 63  RDFLGISVPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGDF 122

Query: 171 QLRVGKVVPSHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHI 230
           QLRVGKVVP++SENLRGIVMEIEYLPISSMEKS+QVMEEFFEVWQEAMSKSSLPGRFMHI
Sbjct: 123 QLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSKQVMEEFFEVWQEAMSKSSLPGRFMHI 182

Query: 231 EPNFAEYGLSDYYTAQHTAVQYANVMAQLIATVQAVQS 268
           EPNFAEYGLSDYYT+QHTAVQYANVMAQLIATVQAVQS
Sbjct: 183 EPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQS 220

[Close]

BLAST of Sgr022281 vs. ExPASy TrEMBL
Match: A0A5D3CH02 (Mediator of RNA polymerase II transcription subunit 20 OS=Cucumis melo var. makuwa OX=1194695 GN=MED20 PE=3 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 4.7e-110
Identity = 203/218 (93.12%), Postives = 211/218 (96.79%), Query Frame = 0


Query: 51  LRRVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLP-ADFP 110
           L+ VLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQN P A+FP
Sbjct: 51  LKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNSPAAEFP 110

Query: 111 RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYKLRVALNFEGFQYQLGDF 170
           RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQ IMEKLQSYKLRVALNFEGFQYQLGDF
Sbjct: 111 RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGDF 170

Query: 171 QLRVGKVVPSHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHI 230
           QLRVGKVVP++SENLRGIVMEIEYLPISSMEKSRQ+M+EFF+VWQEAMSKSSLPGRFMHI
Sbjct: 171 QLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSRQIMDEFFDVWQEAMSKSSLPGRFMHI 230

Query: 231 EPNFAEYGLSDYYTAQHTAVQYANVMAQLIATVQAVQS 268
           E NFAEYGLSD+YT QHTAVQY NVMAQLIATVQAVQS
Sbjct: 231 ESNFAEYGLSDFYTPQHTAVQYGNVMAQLIATVQAVQS 268

[Close]

BLAST of Sgr022281 vs. ExPASy TrEMBL
Match: A0A1S3CAW6 (Mediator of RNA polymerase II transcription subunit 20 OS=Cucumis melo OX=3656 GN=LOC103498750 PE=3 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 4.7e-110
Identity = 203/218 (93.12%), Postives = 211/218 (96.79%), Query Frame = 0


Query: 51  LRRVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLP-ADFP 110
           L+ VLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQN P A+FP
Sbjct: 3   LKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNSPAAEFP 62

Query: 111 RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYKLRVALNFEGFQYQLGDF 170
           RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQ IMEKLQSYKLRVALNFEGFQYQLGDF
Sbjct: 63  RDFLGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGDF 122

Query: 171 QLRVGKVVPSHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHI 230
           QLRVGKVVP++SENLRGIVMEIEYLPISSMEKSRQ+M+EFF+VWQEAMSKSSLPGRFMHI
Sbjct: 123 QLRVGKVVPNNSENLRGIVMEIEYLPISSMEKSRQIMDEFFDVWQEAMSKSSLPGRFMHI 182

Query: 231 EPNFAEYGLSDYYTAQHTAVQYANVMAQLIATVQAVQS 268
           E NFAEYGLSD+YT QHTAVQY NVMAQLIATVQAVQS
Sbjct: 183 ESNFAEYGLSDFYTPQHTAVQYGNVMAQLIATVQAVQS 220

[Close]

BLAST of Sgr022281 vs. TAIR 10
Match: AT2G28230.1 (TATA-binding related factor (TRF) of subunit 20 of Mediator complex )

HSP 1 Score: 329.3 bits (843), Expect = 5.3e-90
Identity = 158/213 (74.18%), Postives = 188/213 (88.26%), Query Frame = 0


Query: 54  VLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPADFPRDFL 113
           VLHWQPN GSTV+SQILNE +QCVESI+GVK G+WKATL +YKP+L+DQ    +FPRDFL
Sbjct: 6   VLHWQPNQGSTVSSQILNEATQCVESINGVKEGRWKATLNYYKPMLKDQANQLEFPRDFL 65

Query: 114 GISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYKLRVALNFEGFQYQLGDFQLRV 173
           GISL +QPNKYY IIR QRIVLEAD +IQ IMEKLQSYK +VAL F+GFQYQLGDF+LRV
Sbjct: 66  GISLADQPNKYYFIIRTQRIVLEADSSIQLIMEKLQSYKSKVALYFDGFQYQLGDFRLRV 125

Query: 174 GKVVPSHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNF 233
           GKVVP+HSEN+RGIVME+EYLPISSMEK+++VMEEF E+W EA++K SLPG+F++I+ NF
Sbjct: 126 GKVVPTHSENVRGIVMEVEYLPISSMEKAQKVMEEFLEIWNEALAKRSLPGKFVNIDLNF 185

Query: 234 AEYGLSDYYTAQHTAVQYANVMAQLIATVQAVQ 267
            E+GL D YT QHTAV+YA VMA +IATVQAV+
Sbjct: 186 GEFGLGDIYTPQHTAVRYALVMAHMIATVQAVR 218

[Close]

BLAST of Sgr022281 vs. TAIR 10
Match: AT4G09070.1 (TATA-binding related factor (TRF) of subunit 20 of Mediator complex )

HSP 1 Score: 296.6 bits (758), Expect = 3.8e-80
Identity = 138/211 (65.40%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 54  VLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLPADFPRDFL 113
           +LHWQPN GST +SQILNEV+Q +ES++GVK G WKATL +YKP+L+DQ   A+FPR+F+
Sbjct: 6   LLHWQPNQGSTFSSQILNEVTQSIESLNGVKEGTWKATLNYYKPMLQDQANQAEFPREFV 65

Query: 114 GISLPEQPNKYYLIIRGQRIVLEADFTIQTIMEKLQSYKLRVALNFEGFQYQLGDFQLRV 173
           GISLPE+P+KYY +IR QRIV+EAD +IQ IME LQSYK +++  FEG +YQLGDF+LRV
Sbjct: 66  GISLPEEPDKYYFVIRSQRIVVEADSSIQMIMESLQSYKCKLSFYFEGLEYQLGDFRLRV 125

Query: 174 GKVVPSHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNF 233
           GKVVP+H+E +RG+VME+EYLPISSM  ++++MEEF E+WQEAMSK SLPG+F++ E NF
Sbjct: 126 GKVVPTHAETIRGVVMEVEYLPISSMGMAKKLMEEFLEIWQEAMSKRSLPGKFVNKELNF 185

Query: 234 AEYGLSDYYTAQHTAVQYANVMAQLIATVQA 265
            ++GL D YT QHTAV YA  MA L+A +QA
Sbjct: 186 EKFGLGDNYTPQHTAVGYAFFMANLMAAIQA 216

[Close]

BLAST of Sgr022281 vs. TAIR 10
Match: AT2G28020.1 (BEST Arabidopsis thaliana protein match is: TATA-binding related factor (TRF) of subunit 20 of Mediator complex (TAIR:AT2G28230.1); Has 37 Blast hits to 37 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 84.3 bits (207), Expect = 3.0e-16
Identity = 43/68 (63.24%), Postives = 55/68 (80.88%), Query Frame = 0


Query: 199 MEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTAQHTAVQ-YANVMAQ 258
           ME +R+VMEEF E+W EA++K SLPG+F++ + NF E+GL D YT QHTAV+ YA VMA 
Sbjct: 1   MEIARKVMEEFLEIWNEALAKRSLPGKFVNKDLNFGEFGLGDNYTPQHTAVRNYALVMAH 60

Query: 259 LIATVQAV 266
           +IATVQAV
Sbjct: 61  MIATVQAV 68

The following BLAST results are available for this feature:

BLAST of Sgr022281 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889134.1	7.1e-113	95.87	mediator of RNA polymerase II transcription subunit 20a-like isoform X1 [Beninca...	[more]
XP_004141069.1	6.7e-111	94.50	mediator of RNA polymerase II transcription subunit 20a [Cucumis sativus] >KGN60...	[more]
XP_022946745.1	8.7e-111	94.04	mediator of RNA polymerase II transcription subunit 20a-like [Cucurbita moschata...	[more]
KAG7030510.1	1.9e-110	94.88	Mediator of RNA polymerase II transcription subunit 20a, partial [Cucurbita argy...	[more]
XP_008459711.1	9.6e-110	93.12	PREDICTED: mediator of RNA polymerase II transcription subunit 20a-like isoform ...	[more]

BLAST of Sgr022281 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NPF4	7.5e-89	74.18	Mediator of RNA polymerase II transcription subunit 20a OS=Arabidopsis thaliana ...	[more]
Q9M0S0	5.4e-79	65.40	Mediator of RNA polymerase II transcription subunit 20b OS=Arabidopsis thaliana ...	[more]
Q54FL3	1.0e-08	28.57	Putative mediator of RNA polymerase II transcription subunit 20 OS=Dictyostelium...	[more]

BLAST of Sgr022281 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHQ1	3.2e-111	94.50	Mediator of RNA polymerase II transcription subunit 20 OS=Cucumis sativus OX=365...	[more]
A0A6J1KEU1	4.2e-111	94.04	Mediator of RNA polymerase II transcription subunit 20 OS=Cucurbita maxima OX=36...	[more]
A0A6J1G4U3	4.2e-111	94.04	Mediator of RNA polymerase II transcription subunit 20 OS=Cucurbita moschata OX=...	[more]
A0A5D3CH02	4.7e-110	93.12	Mediator of RNA polymerase II transcription subunit 20 OS=Cucumis melo var. maku...	[more]
A0A1S3CAW6	4.7e-110	93.12	Mediator of RNA polymerase II transcription subunit 20 OS=Cucumis melo OX=3656 G...	[more]

BLAST of Sgr022281 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28230.1	5.3e-90	74.18	TATA-binding related factor (TRF) of subunit 20 of Mediator complex	[more]
AT4G09070.1	3.8e-80	65.40	TATA-binding related factor (TRF) of subunit 20 of Mediator complex	[more]
AT2G28020.1	3.0e-16	63.24	BEST Arabidopsis thaliana protein match is: TATA-binding related factor (TRF) of...	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013921	Mediator complex, subunit Med20	PFAM	PF08612	Med20	coord: 54..255 e-value: 8.4E-42 score: 143.1
IPR013921	Mediator complex, subunit Med20	PANTHER	PTHR12465	UBIQUITIN SPECIFIC PROTEASE HOMOLOG 49	coord: 54..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 466..483
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 450..465
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 450..493
None	No IPR available	PANTHER	PTHR12465:SF0	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 20	coord: 54..264

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr022281.1	Sgr022281.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0003713	transcription coactivator activity
molecular_function	GO:0003712	transcription coregulator activity