Sgr022006 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr022006
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	type IV secretion system protein virB10-like
Location	tig00153870: 596346 .. 596693 (-)
RNA-Seq Expression	Sgr022006
Synteny	Sgr022006

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACACGACCCCCTCCGCCCCTCCCGGCCAGGGCTCCGTCGGGCCGGTCATCGCGGTTCTCGCCGTGATTTCCATCCTCGGCGTCATTGCAGGCATGATCGGCCGCCTCTGCTCCGGCCGCCCGGTGTTGGGCTACGGCCACTACGACGTCGAGGGGTGGGTCGAGAGGAAATGTGCTTCGTGTCTCGATGGGTCGCTCGACGCTCCGCCGCCCATGCGTAGGCCGCCGCCGGTCGAGGCTGTTCCGGTAGTGGAGCCGGTGGGTGGGCCGCCGGAGATGAAGGAAGGCGAGAGGGAGAATTCGCATTCGACGGCTCCGGGAAATGGCGGTGAGTCGGGAAATTAG

mRNA sequence

ATGCACACGACCCCCTCCGCCCCTCCCGGCCAGGGCTCCGTCGGGCCGGTCATCGCGGTTCTCGCCGTGATTTCCATCCTCGGCGTCATTGCAGGCATGATCGGCCGCCTCTGCTCCGGCCGCCCGGTGTTGGGCTACGGCCACTACGACGTCGAGGGGTGGGTCGAGAGGAAATGTGCTTCGTGTCTCGATGGGTCGCTCGACGCTCCGCCGCCCATGCGTAGGCCGCCGCCGGTCGAGGCTGTTCCGGTAGTGGAGCCGGTGGGTGGGCCGCCGGAGATGAAGGAAGGCGAGAGGGAGAATTCGCATTCGACGGCTCCGGGAAATGGCGGTGAGTCGGGAAATTAG

Coding sequence (CDS)

ATGCACACGACCCCCTCCGCCCCTCCCGGCCAGGGCTCCGTCGGGCCGGTCATCGCGGTTCTCGCCGTGATTTCCATCCTCGGCGTCATTGCAGGCATGATCGGCCGCCTCTGCTCCGGCCGCCCGGTGTTGGGCTACGGCCACTACGACGTCGAGGGGTGGGTCGAGAGGAAATGTGCTTCGTGTCTCGATGGGTCGCTCGACGCTCCGCCGCCCATGCGTAGGCCGCCGCCGGTCGAGGCTGTTCCGGTAGTGGAGCCGGTGGGTGGGCCGCCGGAGATGAAGGAAGGCGAGAGGGAGAATTCGCATTCGACGGCTCCGGGAAATGGCGGTGAGTCGGGAAATTAG

Protein sequence

MHTTPSAPPGQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGHYDVEGWVERKCASCLDGSLDAPPPMRRPPPVEAVPVVEPVGGPPEMKEGERENSHSTAPGNGGESGN

Homology

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BLAST of Sgr022006 vs. NCBI nr
Match: KAG6571994.1 (hypothetical protein SDJN03_28722, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 164.1 bits (414), Expect = 7.2e-37
Identity = 88/117 (75.21%), Postives = 98/117 (83.76%), Query Frame = 0


Query: 5   PSAPPGQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYG-HYDVEGWVERKCASCL 64
           P+A  G GSVGPVIAVLAVISILGVIAG+IGRLCSGRPV GYG HYDVE WVE+KCASCL
Sbjct: 12  PTAHSGYGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCL 71

Query: 65  DGSLDAPPP----MRRPPPVEAVPVVEPVGGPPEMKEG---ERENSHSTAPGNGGES 114
           DGSLD PPP    +R PPP++AVPVVEP+GGPPE+K+G   +REN  S APG GGES
Sbjct: 72  DGSLDPPPPPPPHLRHPPPLDAVPVVEPLGGPPEIKQGADDKRENLQSAAPGTGGES 128

[Close]

BLAST of Sgr022006 vs. NCBI nr
Match: KAG7011671.1 (hypothetical protein SDJN02_26577, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 163.7 bits (413), Expect = 9.4e-37
Identity = 88/119 (73.95%), Postives = 98/119 (82.35%), Query Frame = 0


Query: 5   PSAPPGQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYG-HYDVEGWVERKCASCL 64
           P+A  G GSVGPVIAVLAVISILGVIAG+IGRLCSGRPV GYG HYDVE WVE+KCASCL
Sbjct: 12  PTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCL 71

Query: 65  DGSLDAPPP------MRRPPPVEAVPVVEPVGGPPEMKEG---ERENSHSTAPGNGGES 114
           DGSLD PPP      +R PPP++AVPVVEP+GGPPE+K+G   +REN  S APG GGES
Sbjct: 72  DGSLDPPPPPPPPPHLRHPPPLDAVPVVEPLGGPPEIKQGADDKRENLQSAAPGTGGES 130

[Close]

BLAST of Sgr022006 vs. NCBI nr
Match: XP_022972364.1 (uncharacterized protein LOC111470940 [Cucurbita maxima])

HSP 1 Score: 162.2 bits (409), Expect = 2.7e-36
Identity = 86/114 (75.44%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 5   PSAPPGQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYG-HYDVEGWVERKCASCL 64
           P+A  G GSVGPVIAVLAVISILGVIAG+IGRLCSGRPV GYG HYDVE WVE+KCASCL
Sbjct: 12  PTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCL 71

Query: 65  DGSLDAPPP---MRRPPPVEAVPVVEPVGGPPEMKEG---ERENSHSTAPGNGG 112
           DGSLD PPP   +R PPP++AVPVVEP+GGPPE+K+G   +REN  S APG GG
Sbjct: 72  DGSLDPPPPPAHLRHPPPLDAVPVVEPLGGPPEIKQGADEKRENLQSAAPGTGG 125

[Close]

BLAST of Sgr022006 vs. NCBI nr
Match: XP_022952791.1 (uncharacterized protein LOC111455383 [Cucurbita moschata])

HSP 1 Score: 161.4 bits (407), Expect = 4.7e-36
Identity = 86/115 (74.78%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 5   PSAPPGQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYG-HYDVEGWVERKCASCL 64
           P+A  G GSVGPVIAVLAVISILGVIAG+IGRLCSGRPV GYG HYDVE WVE+KCASCL
Sbjct: 12  PTAHSGYGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCL 71

Query: 65  DGSLDAPPP----MRRPPPVEAVPVVEPVGGPPEMKEG---ERENSHSTAPGNGG 112
           DGSLD PPP    +R PPP++AVPVVEP+GGPPE+K+G   +REN  S APG GG
Sbjct: 72  DGSLDPPPPPPPHLRHPPPLDAVPVVEPLGGPPEIKQGADDKRENLQSAAPGTGG 126

[Close]

BLAST of Sgr022006 vs. NCBI nr
Match: XP_022927713.1 (uncharacterized protein LOC111434531 [Cucurbita moschata])

HSP 1 Score: 156.4 bits (394), Expect = 1.5e-34
Identity = 82/111 (73.87%), Postives = 90/111 (81.08%), Query Frame = 0


Query: 9   PGQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGY-GHYDVEGWVERKCASCLDGSL 68
           P QGSVGPVIAVLAVISILG IAGMIGR+C GRPV GY   YDVE WVE+KCASCLDGSL
Sbjct: 19  PAQGSVGPVIAVLAVISILGFIAGMIGRVCFGRPVFGYNAQYDVEDWVEKKCASCLDGSL 78

Query: 69  DAPPPMRRPPPVEAVPVVEPVGGPPEMKEG-----ERENSHSTAPGNGGES 114
           D PP +R PPP+EA+PV EP+GGPP +KEG     EREN  S APG+GGES
Sbjct: 79  DPPPHLRPPPPIEAIPVSEPLGGPPNIKEGGDGDRERENLQSVAPGSGGES 129

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BLAST of Sgr022006 vs. ExPASy TrEMBL
Match: A0A6J1IBA8 (uncharacterized protein LOC111470940 OS=Cucurbita maxima OX=3661 GN=LOC111470940 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.3e-36
Identity = 86/114 (75.44%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 5   PSAPPGQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYG-HYDVEGWVERKCASCL 64
           P+A  G GSVGPVIAVLAVISILGVIAG+IGRLCSGRPV GYG HYDVE WVE+KCASCL
Sbjct: 12  PTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCL 71

Query: 65  DGSLDAPPP---MRRPPPVEAVPVVEPVGGPPEMKEG---ERENSHSTAPGNGG 112
           DGSLD PPP   +R PPP++AVPVVEP+GGPPE+K+G   +REN  S APG GG
Sbjct: 72  DGSLDPPPPPAHLRHPPPLDAVPVVEPLGGPPEIKQGADEKRENLQSAAPGTGG 125

[Close]

BLAST of Sgr022006 vs. ExPASy TrEMBL
Match: A0A6J1GL66 (uncharacterized protein LOC111455383 OS=Cucurbita moschata OX=3662 GN=LOC111455383 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.3e-36
Identity = 86/115 (74.78%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 5   PSAPPGQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYG-HYDVEGWVERKCASCL 64
           P+A  G GSVGPVIAVLAVISILGVIAG+IGRLCSGRPV GYG HYDVE WVE+KCASCL
Sbjct: 12  PTAHSGYGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEEWVEKKCASCL 71

Query: 65  DGSLDAPPP----MRRPPPVEAVPVVEPVGGPPEMKEG---ERENSHSTAPGNGG 112
           DGSLD PPP    +R PPP++AVPVVEP+GGPPE+K+G   +REN  S APG GG
Sbjct: 72  DGSLDPPPPPPPHLRHPPPLDAVPVVEPLGGPPEIKQGADDKRENLQSAAPGTGG 126

[Close]

BLAST of Sgr022006 vs. ExPASy TrEMBL
Match: A0A6J1ELS6 (uncharacterized protein LOC111434531 OS=Cucurbita moschata OX=3662 GN=LOC111434531 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 7.3e-35
Identity = 82/111 (73.87%), Postives = 90/111 (81.08%), Query Frame = 0


Query: 9   PGQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGY-GHYDVEGWVERKCASCLDGSL 68
           P QGSVGPVIAVLAVISILG IAGMIGR+C GRPV GY   YDVE WVE+KCASCLDGSL
Sbjct: 19  PAQGSVGPVIAVLAVISILGFIAGMIGRVCFGRPVFGYNAQYDVEDWVEKKCASCLDGSL 78

Query: 69  DAPPPMRRPPPVEAVPVVEPVGGPPEMKEG-----ERENSHSTAPGNGGES 114
           D PP +R PPP+EA+PV EP+GGPP +KEG     EREN  S APG+GGES
Sbjct: 79  DPPPHLRPPPPIEAIPVSEPLGGPPNIKEGGDGDRERENLQSVAPGSGGES 129

[Close]

BLAST of Sgr022006 vs. ExPASy TrEMBL
Match: A0A6J1JMK0 (uncharacterized protein LOC111486567 OS=Cucurbita maxima OX=3661 GN=LOC111486567 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.6e-34
Identity = 80/111 (72.07%), Postives = 89/111 (80.18%), Query Frame = 0


Query: 9   PGQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGY-GHYDVEGWVERKCASCLDGSL 68
           P QGSVGPVIAVLAVISILG IAGMIGR+C GRPV GY  HYDVE WVE+KCA+CLDGSL
Sbjct: 19  PAQGSVGPVIAVLAVISILGFIAGMIGRVCFGRPVFGYNAHYDVEDWVEKKCATCLDGSL 78

Query: 69  DAPPPMRRPPPVEAVPVVEPVGGPPEMKEG-----ERENSHSTAPGNGGES 114
           D PP +R PPP+EA+PV EP+GGPP +KE      EREN  S  PG+GGES
Sbjct: 79  DPPPLLRPPPPIEAIPVAEPLGGPPNIKEDGDGDKERENLQSVPPGSGGES 129

[Close]

BLAST of Sgr022006 vs. ExPASy TrEMBL
Match: A0A5A7SPN0 (Type IV secretion system protein virB10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G00320 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 9.9e-32
Identity = 82/123 (66.67%), Postives = 92/123 (74.80%), Query Frame = 0


Query: 5   PSAPPGQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYG-HYDVEGWVERKCASCL 64
           P       SVGP+IAVLAVISILGVIAGMIGRLCSGRPV GYG HYDVE WVE+KCASCL
Sbjct: 12  PPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVEDWVEKKCASCL 71

Query: 65  DGSLDAPPP-------MRRPPPVEAVPVVEPVGG-PPEMKEG-----ERENSHSTAPGNG 114
           DGSLD PPP       +R PPP+++VPV EP+GG PPE+K+G     + EN  S APG G
Sbjct: 72  DGSLDPPPPPPPPPPHLRHPPPLDSVPVAEPLGGPPPEIKQGADADAKGENLQSAAPGTG 131

[Close]

BLAST of Sgr022006 vs. TAIR 10
Match: AT2G26520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57500.1); Has 51 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 78.6 bits (192), Expect = 3.7e-15
Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = 0


Query: 10  GQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGHYDVEGWVERKCASCLDGSLDA 69
           G  ++GP IAV  V+++L V+A +IGRLCSG+ +LGYG YD+E W E +C SC+DG +  
Sbjct: 27  GNSTIGPFIAVFIVVTVLCVLASVIGRLCSGKTILGYGDYDMERWAESRCGSCIDGHIHP 86

Query: 70  PPPMRRPPPVEAVPVVEPVGGPPEMKEG 98
             P   P P    P+     G     EG
Sbjct: 87  HRPSPSPTPPPRQPLHHTSSGVSAESEG 114

[Close]

BLAST of Sgr022006 vs. TAIR 10
Match: AT3G57500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G26520.1); Has 51 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 71.6 bits (174), Expect = 4.5e-13
Identity = 38/81 (46.91%), Postives = 49/81 (60.49%), Query Frame = 0


Query: 5   PSAPPGQGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGHYDVEGWVERKCASCLD 64
           PS      S+  ++ VLAVI+IL V+AG+  RLC GR +   G +D+EGWVERKC SC+D
Sbjct: 29  PSHNSDHRSIETLVVVLAVITILSVLAGVFARLCGGRHLSHGGDHDIEGWVERKCRSCID 88

Query: 65  GSLD----APPPMRRPPPVEA 82
             +     AP P   PPP  A
Sbjct: 89  AGIPAVSAAPSPPPPPPPATA 109

The following BLAST results are available for this feature:

BLAST of Sgr022006 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571994.1	7.2e-37	75.21	hypothetical protein SDJN03_28722, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7011671.1	9.4e-37	73.95	hypothetical protein SDJN02_26577, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022972364.1	2.7e-36	75.44	uncharacterized protein LOC111470940 [Cucurbita maxima]	[more]
XP_022952791.1	4.7e-36	74.78	uncharacterized protein LOC111455383 [Cucurbita moschata]	[more]
XP_022927713.1	1.5e-34	73.87	uncharacterized protein LOC111434531 [Cucurbita moschata]	[more]

BLAST of Sgr022006 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr022006 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IBA8	1.3e-36	75.44	uncharacterized protein LOC111470940 OS=Cucurbita maxima OX=3661 GN=LOC111470940...	[more]
A0A6J1GL66	2.3e-36	74.78	uncharacterized protein LOC111455383 OS=Cucurbita moschata OX=3662 GN=LOC1114553...	[more]
A0A6J1ELS6	7.3e-35	73.87	uncharacterized protein LOC111434531 OS=Cucurbita moschata OX=3662 GN=LOC1114345...	[more]
A0A6J1JMK0	3.6e-34	72.07	uncharacterized protein LOC111486567 OS=Cucurbita maxima OX=3661 GN=LOC111486567...	[more]
A0A5A7SPN0	9.9e-32	66.67	Type IV secretion system protein virB10-like OS=Cucumis melo var. makuwa OX=1194...	[more]

BLAST of Sgr022006 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26520.1	3.7e-15	43.18	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G57500.1	4.5e-13	46.91	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..85
None	No IPR available	PANTHER	PTHR33429:SF2	OS01G0888850 PROTEIN	coord: 9..94
None	No IPR available	PANTHER	PTHR33429	OS02G0708000 PROTEIN-RELATED	coord: 9..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr022006.1	Sgr022006.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane