Sgr021575 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr021575
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	60S acidic ribosomal protein P1-like
Location	tig00153764: 104469 .. 105070 (-)
RNA-Seq Expression	Sgr021575
Synteny	Sgr021575

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTACCTGTGAACTCGCTTGCACCTACGCTTCCTTGATTCTTCATGACGACGGGATCTCCATCACTGTAATATTCTTCTCTCTCTCTCTGATTTGTGTCCTTGTGATTCTTTCTCCGATTTCCAACTCTTTTTGTTCGATTTTAGGCGGAGAAGATTGCTACATTGGTGAAGGCTGCGGGCCTCACCGTCGAATCATACTGGCCATCTCTGTTCGCTAAGTTGGCGTCAAAAAGGAACATCGACGATCTCATTCTGAATGTTGGATCTGCTGCCCCTGCTACTGCTTGTGCTCCCCTGCCCACGGCATCTTCCGCCGATGGCGCTGCTGCCGCTCCTACGGCCGTGAGAAGAAGGTATGGAGTTTATAATACTTGGTTTCACTTTTACGATTATTCATTCATAGAGTTCAAAATTAATTAAAAAACCTTGCTACTTAATACTCATATTGCATTGCACGGGTTTGATCGCACATGCAAGCAATTGATTCGCGTTTTTACTAGAGCATATTCTTGATTATTTGTTATCTTTGTGATTGTATGTACAGGAAGAGGTAGTGGAAGAGAGCGAGGATGACTTGGTCTTCGGCTTGTTTGATTAG

mRNA sequence

ATGTCTACCTGTGAACTCGCTTGCACCTACGCTTCCTTGATTCTTCATGACGACGGGATCTCCATCACTGCGGAGAAGATTGCTACATTGGTGAAGGCTGCGGGCCTCACCGTCGAATCATACTGGCCATCTCTGTTCGCTAAGTTGGCGTCAAAAAGGAACATCGACGATCTCATTCTGAATGTTGGATCTGCTGCCCCTGCTACTGCTTGTGCTCCCCTGCCCACGGCATCTTCCGCCGATGGCGCTGCTGCCGCTCCTACGGCCGAAGAGGTAGTGGAAGAGAGCGAGGATGACTTGGTCTTCGGCTTGTTTGATTAG

Coding sequence (CDS)

ATGTCTACCTGTGAACTCGCTTGCACCTACGCTTCCTTGATTCTTCATGACGACGGGATCTCCATCACTGCGGAGAAGATTGCTACATTGGTGAAGGCTGCGGGCCTCACCGTCGAATCATACTGGCCATCTCTGTTCGCTAAGTTGGCGTCAAAAAGGAACATCGACGATCTCATTCTGAATGTTGGATCTGCTGCCCCTGCTACTGCTTGTGCTCCCCTGCCCACGGCATCTTCCGCCGATGGCGCTGCTGCCGCTCCTACGGCCGAAGAGGTAGTGGAAGAGAGCGAGGATGACTTGGTCTTCGGCTTGTTTGATTAG

Protein sequence

MSTCELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLILNVGSAAPATACAPLPTASSADGAAAAPTAEEVVEESEDDLVFGLFD

Homology

[Close]

BLAST of Sgr021575 vs. NCBI nr
Match: XP_022138164.1 (60S acidic ribosomal protein P1-like isoform X2 [Momordica charantia])

HSP 1 Score: 147.1 bits (370), Expect = 8.4e-32
Identity = 86/113 (76.11%), Postives = 94/113 (83.19%), Query Frame = 0


Query: 1   MSTCELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLIL 60
           MST ELACTYA+LILHDD IS+TAEKIATLVKAAGLTVESYWPSLFAKL+SKRNIDDLIL
Sbjct: 1   MSTSELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60

Query: 61  NVGSAAPATACAPLPTASSADGAAAAPTA-------EEVVEESEDDLVFGLFD 107
           NVGSAA A+A   + ++SSAD +AA   A       EE VEESEDDLVFGLFD
Sbjct: 61  NVGSAA-ASAPLSMASSSSADASAAPAPAPAPVEKKEEAVEESEDDLVFGLFD 112

[Close]

BLAST of Sgr021575 vs. NCBI nr
Match: XP_022138163.1 (60S acidic ribosomal protein P1-like isoform X1 [Momordica charantia])

HSP 1 Score: 142.9 bits (359), Expect = 1.6e-30
Identity = 83/109 (76.15%), Postives = 91/109 (83.49%), Query Frame = 0


Query: 5   ELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLILNVGS 64
           ELACTYA+LILHDD IS+TAEKIATLVKAAGLTVESYWPSLFAKL+SKRNIDDLILNVGS
Sbjct: 33  ELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLILNVGS 92

Query: 65  AAPATACAPLPTASSADGAAAAPTA-------EEVVEESEDDLVFGLFD 107
           AA A+A   + ++SSAD +AA   A       EE VEESEDDLVFGLFD
Sbjct: 93  AA-ASAPLSMASSSSADASAAPAPAPAPVEKKEEAVEESEDDLVFGLFD 140

[Close]

BLAST of Sgr021575 vs. NCBI nr
Match: KAG8381585.1 (hypothetical protein BUALT_Bualt06G0136800 [Buddleja alternifolia])

HSP 1 Score: 130.2 bits (326), Expect = 1.1e-26
Identity = 74/111 (66.67%), Postives = 84/111 (75.68%), Query Frame = 0


Query: 1   MSTCELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLIL 60
           MS  ELACTYA+LILHDDGI ITAEKIATLVKAA LTVESYWPSLFAKL  KRN++DL++
Sbjct: 1   MSIGELACTYAALILHDDGIPITAEKIATLVKAANLTVESYWPSLFAKLCEKRNVEDLVM 60

Query: 61  NVGSAAPATACAPLPTASSADG--AAAAPTAE---EVVEESEDDLVFGLFD 107
           NVGS   A      P   +A G  AAAAP AE   EV EES++++ FGLFD
Sbjct: 61  NVGSGGGAAVAVAAPAGGAAAGAAAAAAPAAEEKKEVEEESDEEMGFGLFD 111

[Close]

BLAST of Sgr021575 vs. NCBI nr
Match: XP_018842776.1 (60S acidic ribosomal protein P1-like [Juglans regia] >XP_018842777.1 60S acidic ribosomal protein P1-like [Juglans regia] >KAF5442654.1 hypothetical protein F2P56_035292 [Juglans regia] >KAF5442655.1 hypothetical protein F2P56_035293 [Juglans regia])

HSP 1 Score: 129.8 bits (325), Expect = 1.4e-26
Identity = 76/113 (67.26%), Postives = 85/113 (75.22%), Query Frame = 0


Query: 1   MSTCELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLIL 60
           MS+ ELACTYASLILHDDGI+ITAEKIA LVKAAG++VESYWPSLFAKLA KRNIDDLIL
Sbjct: 1   MSSSELACTYASLILHDDGIAITAEKIAMLVKAAGVSVESYWPSLFAKLAEKRNIDDLIL 60

Query: 61  NVGSAAPATACAPLPTASSADG--AAAAPTAEEVVEE-----SEDDLVFGLFD 107
           N G+A      AP+  ++ A G  AAAAP  EE  EE      +DDL F LFD
Sbjct: 61  NAGAAGGGGGAAPVALSAPAGGAAAAAAPAVEEKKEEPKEESDDDDLGFSLFD 113

[Close]

BLAST of Sgr021575 vs. NCBI nr
Match: XP_030935261.1 (60S acidic ribosomal protein P1 [Quercus lobata])

HSP 1 Score: 129.0 bits (323), Expect = 2.4e-26
Identity = 81/114 (71.05%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 1   MSTCELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLIL 60
           MST ELACTYASL+LHDDGI+IT+EKIATLVKAAG++VESYWPSLFAKLA KR+IDDLIL
Sbjct: 1   MSTGELACTYASLLLHDDGIAITSEKIATLVKAAGVSVESYWPSLFAKLAEKRSIDDLIL 60

Query: 61  NVGS---AAPATACAPLPTASSADGAAAAPTA----EEVVEESED-DLVFGLFD 107
           N GS   AAP    AP   A  A  AAAAP      EEV EES+D DL FGLFD
Sbjct: 61  NAGSGGAAAPVAVSAPAGGAGGA-VAAAAPAVEEKKEEVQEESDDGDLGFGLFD 113

[Close]

BLAST of Sgr021575 vs. ExPASy Swiss-Prot
Match: P52855 (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.2e-26
Identity = 67/109 (61.47%), Postives = 81/109 (74.31%), Query Frame = 0


Query: 1   MSTCELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLIL 60
           M++ ELAC YA+LIL DDGI+ITAEKIAT+VKAA + VESYWP+LFAKL  KRN++DLIL
Sbjct: 1   MASGELACRYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60

Query: 61  NVGS---AAPATACAPLPTASSADGAAAAPTAEEVVEESEDDLVFGLFD 107
           +VGS   AAP  A AP   A++A   A     EE  EES+DD+ F LFD
Sbjct: 61  SVGSGGGAAPVAAAAPAGGAAAAAAPAVEEKKEEAKEESDDDMGFSLFD 109

[Close]

BLAST of Sgr021575 vs. ExPASy Swiss-Prot
Match: Q8LEQ0 (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 2.1e-25
Identity = 71/116 (61.21%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 1   MSTC-ELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLI 60
           MST  ELAC+YA +IL D+GI+ITA+KIATLVKAAG+T+ESYWP LFAK+A KRN+ DLI
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGS----AAPATACAPLPTASSADGAAAAPTAE-----EVVEESEDDLVFGLFD 107
           +NVG+     AP  A AP   A+    AAAAP AE     E  EES+ DL FGLFD
Sbjct: 61  MNVGAGGGGGAPVAAAAP---AAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of Sgr021575 vs. ExPASy Swiss-Prot
Match: Q8LCW9 (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 2.7e-25
Identity = 70/116 (60.34%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 1   MSTC-ELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLI 60
           MST  ELAC+YA +IL D+GI+ITA+KIATLVKAAG+++ESYWP LFAK+A KRN+ DLI
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGS----AAPATACAPLPTASSADGAAAAPTAE-----EVVEESEDDLVFGLFD 107
           +NVG+     AP  A AP    ++  GAAAAP AE     E  EES+ DL FGLFD
Sbjct: 61  MNVGAGGGGGAPVAAAAP----AAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]

BLAST of Sgr021575 vs. ExPASy Swiss-Prot
Match: P29763 (60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 7.9e-25
Identity = 63/107 (58.88%), Postives = 76/107 (71.03%), Query Frame = 0


Query: 1   MSTCELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLIL 60
           MST ELACTYA+LILHDDG+ ITA+ I T+ KAAG+ VE YWP+LFAKL +K+++DDLI 
Sbjct: 1   MSTSELACTYAALILHDDGLEITADNINTICKAAGVEVEGYWPALFAKLFAKKSMDDLIT 60

Query: 61  NVGSAAPATACAPLPTASSADGAAAAPTAEEVVEES-EDDLVFGLFD 107
           NVG+   A   A  P A  A  A AAP  EE  E S E+D+ F LFD
Sbjct: 61  NVGAGGGAAPAAAAPAAGGAPAAGAAPKKEEKKEPSEEEDMGFSLFD 107

[Close]

BLAST of Sgr021575 vs. ExPASy Swiss-Prot
Match: O23095 (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 5.1e-24
Identity = 68/116 (58.62%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 1   MSTC-ELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLI 60
           MST  ELAC+YA +IL D+GI+IT++KIATLVKAAG+ +ESYWP LFAK+A KRN+ DLI
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGS-----AAPATACAPLPTASSADGAAAAPTAE----EVVEESEDDLVFGLFD 107
           +NVG+      AP +A AP   A++   AAAAP  E    E  EES+ DL FGLFD
Sbjct: 61  MNVGAGGGGGGAPVSAAAP---AAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of Sgr021575 vs. ExPASy TrEMBL
Match: A0A6J1C9A3 (60S acidic ribosomal protein P1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009401 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.1e-32
Identity = 86/113 (76.11%), Postives = 94/113 (83.19%), Query Frame = 0


Query: 1   MSTCELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLIL 60
           MST ELACTYA+LILHDD IS+TAEKIATLVKAAGLTVESYWPSLFAKL+SKRNIDDLIL
Sbjct: 1   MSTSELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60

Query: 61  NVGSAAPATACAPLPTASSADGAAAAPTA-------EEVVEESEDDLVFGLFD 107
           NVGSAA A+A   + ++SSAD +AA   A       EE VEESEDDLVFGLFD
Sbjct: 61  NVGSAA-ASAPLSMASSSSADASAAPAPAPAPVEKKEEAVEESEDDLVFGLFD 112

[Close]

BLAST of Sgr021575 vs. ExPASy TrEMBL
Match: A0A6J1CC92 (60S acidic ribosomal protein P1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009401 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 7.7e-31
Identity = 83/109 (76.15%), Postives = 91/109 (83.49%), Query Frame = 0


Query: 5   ELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLILNVGS 64
           ELACTYA+LILHDD IS+TAEKIATLVKAAGLTVESYWPSLFAKL+SKRNIDDLILNVGS
Sbjct: 33  ELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLILNVGS 92

Query: 65  AAPATACAPLPTASSADGAAAAPTA-------EEVVEESEDDLVFGLFD 107
           AA A+A   + ++SSAD +AA   A       EE VEESEDDLVFGLFD
Sbjct: 93  AA-ASAPLSMASSSSADASAAPAPAPAPVEKKEEAVEESEDDLVFGLFD 140

[Close]

BLAST of Sgr021575 vs. ExPASy TrEMBL
Match: A0A2I4GFV6 (60S acidic ribosomal protein P1-like OS=Juglans regia OX=51240 GN=LOC109007536 PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 6.7e-27
Identity = 76/113 (67.26%), Postives = 85/113 (75.22%), Query Frame = 0


Query: 1   MSTCELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLIL 60
           MS+ ELACTYASLILHDDGI+ITAEKIA LVKAAG++VESYWPSLFAKLA KRNIDDLIL
Sbjct: 1   MSSSELACTYASLILHDDGIAITAEKIAMLVKAAGVSVESYWPSLFAKLAEKRNIDDLIL 60

Query: 61  NVGSAAPATACAPLPTASSADG--AAAAPTAEEVVEE-----SEDDLVFGLFD 107
           N G+A      AP+  ++ A G  AAAAP  EE  EE      +DDL F LFD
Sbjct: 61  NAGAAGGGGGAAPVALSAPAGGAAAAAAPAVEEKKEEPKEESDDDDLGFSLFD 113

[Close]

BLAST of Sgr021575 vs. ExPASy TrEMBL
Match: A0A7N2MH30 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.2e-26
Identity = 81/114 (71.05%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 1   MSTCELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLIL 60
           MST ELACTYASL+LHDDGI+IT+EKIATLVKAAG++VESYWPSLFAKLA KR+IDDLIL
Sbjct: 1   MSTGELACTYASLLLHDDGIAITSEKIATLVKAAGVSVESYWPSLFAKLAEKRSIDDLIL 60

Query: 61  NVGS---AAPATACAPLPTASSADGAAAAPTA----EEVVEESED-DLVFGLFD 107
           N GS   AAP    AP   A  A  AAAAP      EEV EES+D DL FGLFD
Sbjct: 61  NAGSGGAAAPVAVSAPAGGAGGA-VAAAAPAVEEKKEEVQEESDDGDLGFGLFD 113

[Close]

BLAST of Sgr021575 vs. ExPASy TrEMBL
Match: A0A218X3W3 (60S acidic ribosomal protein P1-like OS=Punica granatum OX=22663 GN=LOC116203715 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.5e-26
Identity = 76/113 (67.26%), Postives = 85/113 (75.22%), Query Frame = 0


Query: 1   MSTCELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLIL 60
           MST E+ACTYASLILHDDGI ITAEKIA+LVKAA + VESYWPSLFAKLA KRN+DDL++
Sbjct: 1   MSTGEVACTYASLILHDDGIPITAEKIASLVKAANVNVESYWPSLFAKLAEKRNVDDLVM 60

Query: 61  NVGS---AAPATACAPLPTASSADGAAAAPTA----EEVVEESEDDLVFGLFD 107
           NVGS   AAP  A AP   A+    AAA P A    EE  EES+DD+ F LFD
Sbjct: 61  NVGSGGGAAPVAAAAP---AAGGAAAAATPAAEEKKEEPKEESDDDMGFSLFD 110

[Close]

BLAST of Sgr021575 vs. TAIR 10
Match: AT5G24510.1 (60S acidic ribosomal protein family )

HSP 1 Score: 117.9 bits (294), Expect = 5.1e-27
Identity = 66/111 (59.46%), Postives = 77/111 (69.37%), Query Frame = 0


Query: 1   MSTCELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLIL 60
           MST ELACTYA+LILHDDGI ITAE I+ LVK A + VESYWPSLFAKL  K+NIDDLI+
Sbjct: 1   MSTSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIM 60

Query: 61  NVGS-----AAPATACAPLPTASSADGAAAAPTAEEVVEESEDDLVFGLFD 107
           NVG+     A P T  AP  + S +         E + EESEDD++ GLFD
Sbjct: 61  NVGAGGCGVARPVTTAAPTASQSVSIPEEKKNEMEVIKEESEDDMIIGLFD 111

[Close]

BLAST of Sgr021575 vs. TAIR 10
Match: AT5G47700.1 (60S acidic ribosomal protein family )

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-26
Identity = 71/116 (61.21%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 1   MSTC-ELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLI 60
           MST  ELAC+YA +IL D+GI+ITA+KIATLVKAAG+T+ESYWP LFAK+A KRN+ DLI
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGS----AAPATACAPLPTASSADGAAAAPTAE-----EVVEESEDDLVFGLFD 107
           +NVG+     AP  A AP   A+    AAAAP AE     E  EES+ DL FGLFD
Sbjct: 61  MNVGAGGGGGAPVAAAAP---AAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of Sgr021575 vs. TAIR 10
Match: AT5G47700.2 (60S acidic ribosomal protein family )

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-26
Identity = 71/116 (61.21%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 1   MSTC-ELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLI 60
           MST  ELAC+YA +IL D+GI+ITA+KIATLVKAAG+T+ESYWP LFAK+A KRN+ DLI
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGS----AAPATACAPLPTASSADGAAAAPTAE-----EVVEESEDDLVFGLFD 107
           +NVG+     AP  A AP   A+    AAAAP AE     E  EES+ DL FGLFD
Sbjct: 61  MNVGAGGGGGAPVAAAAP---AAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of Sgr021575 vs. TAIR 10
Match: AT1G01100.1 (60S acidic ribosomal protein family )

HSP 1 Score: 115.9 bits (289), Expect = 1.9e-26
Identity = 70/116 (60.34%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 1   MSTC-ELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLI 60
           MST  ELAC+YA +IL D+GI+ITA+KIATLVKAAG+++ESYWP LFAK+A KRN+ DLI
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGS----AAPATACAPLPTASSADGAAAAPTAE-----EVVEESEDDLVFGLFD 107
           +NVG+     AP  A AP    ++  GAAAAP AE     E  EES+ DL FGLFD
Sbjct: 61  MNVGAGGGGGAPVAAAAP----AAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]

BLAST of Sgr021575 vs. TAIR 10
Match: AT1G01100.2 (60S acidic ribosomal protein family )

HSP 1 Score: 115.9 bits (289), Expect = 1.9e-26
Identity = 70/116 (60.34%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 1   MSTC-ELACTYASLILHDDGISITAEKIATLVKAAGLTVESYWPSLFAKLASKRNIDDLI 60
           MST  ELAC+YA +IL D+GI+ITA+KIATLVKAAG+++ESYWP LFAK+A KRN+ DLI
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LNVGS----AAPATACAPLPTASSADGAAAAPTAE-----EVVEESEDDLVFGLFD 107
           +NVG+     AP  A AP    ++  GAAAAP AE     E  EES+ DL FGLFD
Sbjct: 61  MNVGAGGGGGAPVAAAAP----AAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

The following BLAST results are available for this feature:

BLAST of Sgr021575 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138164.1	8.4e-32	76.11	60S acidic ribosomal protein P1-like isoform X2 [Momordica charantia]	[more]
XP_022138163.1	1.6e-30	76.15	60S acidic ribosomal protein P1-like isoform X1 [Momordica charantia]	[more]
KAG8381585.1	1.1e-26	66.67	hypothetical protein BUALT_Bualt06G0136800 [Buddleja alternifolia]	[more]
XP_018842776.1	1.4e-26	67.26	60S acidic ribosomal protein P1-like [Juglans regia] >XP_018842777.1 60S acidic ...	[more]
XP_030935261.1	2.4e-26	71.05	60S acidic ribosomal protein P1 [Quercus lobata]	[more]

BLAST of Sgr021575 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P52855	4.2e-26	61.47	60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1	[more]
Q8LEQ0	2.1e-25	61.21	60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 ...	[more]
Q8LCW9	2.7e-25	60.34	60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 ...	[more]
P29763	7.9e-25	58.88	60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1	[more]
O23095	5.1e-24	58.62	60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 ...	[more]

BLAST of Sgr021575 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C9A3	4.1e-32	76.11	60S acidic ribosomal protein P1-like isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CC92	7.7e-31	76.15	60S acidic ribosomal protein P1-like isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A2I4GFV6	6.7e-27	67.26	60S acidic ribosomal protein P1-like OS=Juglans regia OX=51240 GN=LOC109007536 P...	[more]
A0A7N2MH30	1.2e-26	71.05	Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]
A0A218X3W3	1.5e-26	67.26	60S acidic ribosomal protein P1-like OS=Punica granatum OX=22663 GN=LOC116203715...	[more]

BLAST of Sgr021575 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24510.1	5.1e-27	59.46	60S acidic ribosomal protein family	[more]
AT5G47700.1	1.5e-26	61.21	60S acidic ribosomal protein family	[more]
AT5G47700.2	1.5e-26	61.21	60S acidic ribosomal protein family	[more]
AT1G01100.1	1.9e-26	60.34	60S acidic ribosomal protein family	[more]
AT1G01100.2	1.9e-26	60.34	60S acidic ribosomal protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038716	Ribosomal protein P1/P2, N-terminal domain	GENE3D	1.10.10.1410		coord: 1..63 e-value: 1.9E-32 score: 112.9
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 21..105 e-value: 1.8E-19 score: 70.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..98
None	No IPR available	PANTHER	PTHR45696	60S ACIDIC RIBOSOMAL PROTEIN P1	coord: 1..106
None	No IPR available	CDD	cd05831	Ribosomal_P1	coord: 5..73 e-value: 5.01351E-32 score: 106.252
IPR027534	Ribosomal protein L12/P1/P2 family	HAMAP	MF_01478	Ribosomal_L12_arch	coord: 6..106 score: 12.590723

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr021575.1	Sgr021575.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006414	translational elongation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0030295	protein kinase activator activity
molecular_function	GO:0043021	ribonucleoprotein complex binding
molecular_function	GO:0003735	structural constituent of ribosome