Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GACTGCAGCTTCTCTCTTAAGAATCTCAGAGTCTGCGAGTGGTCTTACCAACTCTGAATCAGTAAAGGACACTAAAGAACTTCAGTATTATAGTTCATCACCTCTCAACATTGAAGATAATAGGGAAGACAATCAAGAACCTAAACAGCATTCCTTCAATCCTTTTAGAAATTGGTTTAGTCATCTGTGGTCAAAACAACGCCAAAGAGATGACTTTCCTCGGGAACATGTGAAGCAAAATGTGCAGCCTAGTCCTTTTCTCCCTAAAATAACAATGGTAGGTATCTCTACTGGTGAAGCAGGGCACATGAGTAAAGCCAATTTAAAAAAGACAATGGAAGATTTGACTAGAGAACTAGAGCATATAGATCAGGGAAATGCTGGTAGTCTCTGTGAATATGATATCAACAACGAAGAAAGGGATCCATTATTTGTTGCAAATGTCAGTCATTTCTGCTCTGGCTTGGCAAAGGCAGGTTCAGCACGGTGGGTCCGAGGAAACGATTAA
mRNA sequence
GACTGCAGCTTCTCTCTTAAGAATCTCAGAGTCTGCGAGTGGTCTTACCAACTCTGAATCAGTAAAGGACACTAAAGAACTTCAGTATTATAGTTCATCACCTCTCAACATTGAAGATAATAGGGAAGACAATCAAGAACCTAAACAGCATTCCTTCAATCCTTTTAGAAATTGGTTTAGTCATCTGTGGTCAAAACAACGCCAAAGAGATGACTTTCCTCGGGAACATGTGAAGCAAAATGTGCAGCCTAGTCCTTTTCTCCCTAAAATAACAATGGTAGGTATCTCTACTGGTGAAGCAGGGCACATGAGTAAAGCCAATTTAAAAAAGACAATGGAAGATTTGACTAGAGAACTAGAGCATATAGATCAGGGAAATGCTGGTAGTCTCTGTGAATATGATATCAACAACGAAGAAAGGGATCCATTATTTGTTGCAAATGTCAGTCATTTCTGCTCTGGCTTGGCAAAGGCAGGTTCAGCACGGTGGGTCCGAGGAAACGATTAA
Coding sequence (CDS)
GACTGCAGCTTCTCTCTTAAGAATCTCAGAGTCTGCGAGTGGTCTTACCAACTCTGAATCAGTAAAGGACACTAAAGAACTTCAGTATTATAGTTCATCACCTCTCAACATTGAAGATAATAGGGAAGACAATCAAGAACCTAAACAGCATTCCTTCAATCCTTTTAGAAATTGGTTTAGTCATCTGTGGTCAAAACAACGCCAAAGAGATGACTTTCCTCGGGAACATGTGAAGCAAAATGTGCAGCCTAGTCCTTTTCTCCCTAAAATAACAATGGTAGGTATCTCTACTGGTGAAGCAGGGCACATGAGTAAAGCCAATTTAAAAAAGACAATGGAAGATTTGACTAGAGAACTAGAGCATATAGATCAGGGAAATGCTGGTAGTCTCTGTGAATATGATATCAACAACGAAGAAAGGGATCCATTATTTGTTGCAAATGTCAGTCATTTCTGCTCTGGCTTGGCAAAGGCAGGTTCAGCACGGTGGGTCCGAGGAAACGATTAA
Protein sequence
TAASLLRISESASGLTNSESVKDTKELQYYSSSPLNIEDNREDNQEPKQHSFNPFRNWFSHLWSKQRQRDDFPREHVKQNVQPSPFLPKITMVGISTGEAGHMSKANLKKTMEDLTRELEHIDQGNAGSLCEYDINNEERDPLFVANVSHFCSGLAKAGSARWVRGND
Homology
BLAST of Sgr021200 vs. NCBI nr
Match:
XP_038874545.1 (uncharacterized protein LOC120067161 isoform X1 [Benincasa hispida])
HSP 1 Score: 297.4 bits (760), Expect = 8.0e-77
Identity = 145/168 (86.31%), Postives = 157/168 (93.45%), Query Frame = 0
Query: 1 TAASLLRISESASGLTNSESVKDTKELQYYSSSPLNIEDNREDNQEPKQHSFNPFRNWFS 60
+AASLLR SESASGLTNSESVK+TKELQYYSSSPLNI+DNRE NQEPKQH FNPFRNWF+
Sbjct: 393 SAASLLRNSESASGLTNSESVKETKELQYYSSSPLNIQDNRETNQEPKQHFFNPFRNWFN 452
Query: 61 HLWSKQRQRDDFPREHVKQNVQPSPFLPKITMVGISTGEAGHMSKANLKKTMEDLTRELE 120
H+WSKQRQRDDFP+E +KQNVQPSPFLPKITMVGISTG++G SKANLKKTMEDLT+ELE
Sbjct: 453 HIWSKQRQRDDFPQERMKQNVQPSPFLPKITMVGISTGDSGQTSKANLKKTMEDLTKELE 512
Query: 121 HIDQGNAGSLCEYDINNEERDPLFVANVSHFCSGLAKAGSARWVRGND 169
HIDQGN S EY+ NNEERDPLFVANVSHFCSGL+KAGSARWVRGND
Sbjct: 513 HIDQGNGASHNEYEFNNEERDPLFVANVSHFCSGLSKAGSARWVRGND 560
BLAST of Sgr021200 vs. NCBI nr
Match:
XP_038874546.1 (uncharacterized protein LOC120067161 isoform X2 [Benincasa hispida])
HSP 1 Score: 297.4 bits (760), Expect = 8.0e-77
Identity = 145/168 (86.31%), Postives = 157/168 (93.45%), Query Frame = 0
Query: 1 TAASLLRISESASGLTNSESVKDTKELQYYSSSPLNIEDNREDNQEPKQHSFNPFRNWFS 60
+AASLLR SESASGLTNSESVK+TKELQYYSSSPLNI+DNRE NQEPKQH FNPFRNWF+
Sbjct: 387 SAASLLRNSESASGLTNSESVKETKELQYYSSSPLNIQDNRETNQEPKQHFFNPFRNWFN 446
Query: 61 HLWSKQRQRDDFPREHVKQNVQPSPFLPKITMVGISTGEAGHMSKANLKKTMEDLTRELE 120
H+WSKQRQRDDFP+E +KQNVQPSPFLPKITMVGISTG++G SKANLKKTMEDLT+ELE
Sbjct: 447 HIWSKQRQRDDFPQERMKQNVQPSPFLPKITMVGISTGDSGQTSKANLKKTMEDLTKELE 506
Query: 121 HIDQGNAGSLCEYDINNEERDPLFVANVSHFCSGLAKAGSARWVRGND 169
HIDQGN S EY+ NNEERDPLFVANVSHFCSGL+KAGSARWVRGND
Sbjct: 507 HIDQGNGASHNEYEFNNEERDPLFVANVSHFCSGLSKAGSARWVRGND 554
BLAST of Sgr021200 vs. NCBI nr
Match:
XP_004145902.1 (uncharacterized protein LOC101215938 [Cucumis sativus] >KGN49918.1 hypothetical protein Csa_000071 [Cucumis sativus])
HSP 1 Score: 289.7 bits (740), Expect = 1.7e-74
Identity = 145/168 (86.31%), Postives = 153/168 (91.07%), Query Frame = 0
Query: 1 TAASLLRISESASGLTNSESVKDTKELQYYSSSPLNIEDNREDNQEPKQHSFNPFRNWFS 60
+AASLLRI ESASGLTNSESV++TKELQ YSSSPLN EDNRE NQEPKQHSFNPFRNWF
Sbjct: 387 SAASLLRIQESASGLTNSESVEETKELQCYSSSPLNTEDNREANQEPKQHSFNPFRNWFG 446
Query: 61 HLWSKQRQRDDFPREHVKQNVQPSPFLPKITMVGISTGEAGHMSKANLKKTMEDLTRELE 120
HLWSKQRQRDDF +E KQNVQ SPFLPKITMVGISTG++GH SKANLKKTMEDLTRELE
Sbjct: 447 HLWSKQRQRDDFSQERTKQNVQISPFLPKITMVGISTGDSGHTSKANLKKTMEDLTRELE 506
Query: 121 HIDQGNAGSLCEYDINNEERDPLFVANVSHFCSGLAKAGSARWVRGND 169
HIDQGNA S EY+ NNEERDPLFVANVSHF SGL+KAGSARWVRGND
Sbjct: 507 HIDQGNAASHNEYEFNNEERDPLFVANVSHFSSGLSKAGSARWVRGND 554
BLAST of Sgr021200 vs. NCBI nr
Match:
KAG7035648.1 (hypothetical protein SDJN02_02446 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 288.9 bits (738), Expect = 2.8e-74
Identity = 144/168 (85.71%), Postives = 158/168 (94.05%), Query Frame = 0
Query: 1 TAASLLRISESASGLTNSESVKDTKELQYYSSSPLNIEDNREDNQEPKQHSFNPFRNWFS 60
+AASLLRISESASGLTNS+SVK+TKELQY SSSPL+I+DNRE NQEPKQ SFNPFRN FS
Sbjct: 387 SAASLLRISESASGLTNSKSVKETKELQYTSSSPLDIQDNREANQEPKQRSFNPFRNLFS 446
Query: 61 HLWSKQRQRDDFPREHVKQNVQPSPFLPKITMVGISTGEAGHMSKANLKKTMEDLTRELE 120
HLWS++RQRDDFP+E KQNVQPSPFLPKITMVGISTGE+GHMSKANLKKTMEDLTRELE
Sbjct: 447 HLWSRRRQRDDFPQEQAKQNVQPSPFLPKITMVGISTGESGHMSKANLKKTMEDLTRELE 506
Query: 121 HIDQGNAGSLCEYDINNEERDPLFVANVSHFCSGLAKAGSARWVRGND 169
++DQGNA + EY++NNEERDPLFVANVSHF SGLAKAGSARWVRGND
Sbjct: 507 NVDQGNAANHNEYELNNEERDPLFVANVSHFSSGLAKAGSARWVRGND 554
BLAST of Sgr021200 vs. NCBI nr
Match:
XP_022958481.1 (uncharacterized protein LOC111459695 [Cucurbita moschata])
HSP 1 Score: 288.9 bits (738), Expect = 2.8e-74
Identity = 144/168 (85.71%), Postives = 158/168 (94.05%), Query Frame = 0
Query: 1 TAASLLRISESASGLTNSESVKDTKELQYYSSSPLNIEDNREDNQEPKQHSFNPFRNWFS 60
+AASLLRISESASGLTNS+SVK+TKELQY SSSPL+I+DNRE NQEPKQ SFNPFRN FS
Sbjct: 387 SAASLLRISESASGLTNSKSVKETKELQYTSSSPLDIQDNREANQEPKQRSFNPFRNLFS 446
Query: 61 HLWSKQRQRDDFPREHVKQNVQPSPFLPKITMVGISTGEAGHMSKANLKKTMEDLTRELE 120
HLWS++RQRDDFP+E KQNVQPSPFLPKITMVGISTGE+GHMSKANLKKTMEDLTRELE
Sbjct: 447 HLWSRRRQRDDFPQEQAKQNVQPSPFLPKITMVGISTGESGHMSKANLKKTMEDLTRELE 506
Query: 121 HIDQGNAGSLCEYDINNEERDPLFVANVSHFCSGLAKAGSARWVRGND 169
++DQGNA + EY++NNEERDPLFVANVSHF SGLAKAGSARWVRGND
Sbjct: 507 NVDQGNAANHNEYELNNEERDPLFVANVSHFSSGLAKAGSARWVRGND 554
BLAST of Sgr021200 vs. ExPASy TrEMBL
Match:
A0A0A0KK08 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G140440 PE=4 SV=1)
HSP 1 Score: 289.7 bits (740), Expect = 8.1e-75
Identity = 145/168 (86.31%), Postives = 153/168 (91.07%), Query Frame = 0
Query: 1 TAASLLRISESASGLTNSESVKDTKELQYYSSSPLNIEDNREDNQEPKQHSFNPFRNWFS 60
+AASLLRI ESASGLTNSESV++TKELQ YSSSPLN EDNRE NQEPKQHSFNPFRNWF
Sbjct: 387 SAASLLRIQESASGLTNSESVEETKELQCYSSSPLNTEDNREANQEPKQHSFNPFRNWFG 446
Query: 61 HLWSKQRQRDDFPREHVKQNVQPSPFLPKITMVGISTGEAGHMSKANLKKTMEDLTRELE 120
HLWSKQRQRDDF +E KQNVQ SPFLPKITMVGISTG++GH SKANLKKTMEDLTRELE
Sbjct: 447 HLWSKQRQRDDFSQERTKQNVQISPFLPKITMVGISTGDSGHTSKANLKKTMEDLTRELE 506
Query: 121 HIDQGNAGSLCEYDINNEERDPLFVANVSHFCSGLAKAGSARWVRGND 169
HIDQGNA S EY+ NNEERDPLFVANVSHF SGL+KAGSARWVRGND
Sbjct: 507 HIDQGNAASHNEYEFNNEERDPLFVANVSHFSSGLSKAGSARWVRGND 554
BLAST of Sgr021200 vs. ExPASy TrEMBL
Match:
A0A6J1H266 (uncharacterized protein LOC111459695 OS=Cucurbita moschata OX=3662 GN=LOC111459695 PE=4 SV=1)
HSP 1 Score: 288.9 bits (738), Expect = 1.4e-74
Identity = 144/168 (85.71%), Postives = 158/168 (94.05%), Query Frame = 0
Query: 1 TAASLLRISESASGLTNSESVKDTKELQYYSSSPLNIEDNREDNQEPKQHSFNPFRNWFS 60
+AASLLRISESASGLTNS+SVK+TKELQY SSSPL+I+DNRE NQEPKQ SFNPFRN FS
Sbjct: 387 SAASLLRISESASGLTNSKSVKETKELQYTSSSPLDIQDNREANQEPKQRSFNPFRNLFS 446
Query: 61 HLWSKQRQRDDFPREHVKQNVQPSPFLPKITMVGISTGEAGHMSKANLKKTMEDLTRELE 120
HLWS++RQRDDFP+E KQNVQPSPFLPKITMVGISTGE+GHMSKANLKKTMEDLTRELE
Sbjct: 447 HLWSRRRQRDDFPQEQAKQNVQPSPFLPKITMVGISTGESGHMSKANLKKTMEDLTRELE 506
Query: 121 HIDQGNAGSLCEYDINNEERDPLFVANVSHFCSGLAKAGSARWVRGND 169
++DQGNA + EY++NNEERDPLFVANVSHF SGLAKAGSARWVRGND
Sbjct: 507 NVDQGNAANHNEYELNNEERDPLFVANVSHFSSGLAKAGSARWVRGND 554
BLAST of Sgr021200 vs. ExPASy TrEMBL
Match:
A0A6J1K5H1 (uncharacterized protein LOC111491342 OS=Cucurbita maxima OX=3661 GN=LOC111491342 PE=4 SV=1)
HSP 1 Score: 286.2 bits (731), Expect = 8.9e-74
Identity = 142/168 (84.52%), Postives = 157/168 (93.45%), Query Frame = 0
Query: 1 TAASLLRISESASGLTNSESVKDTKELQYYSSSPLNIEDNREDNQEPKQHSFNPFRNWFS 60
+AASLLRISESASGLTNS+SVK+TKELQY SSSP++I+DN E NQEPKQHSFNPFRN FS
Sbjct: 387 SAASLLRISESASGLTNSKSVKETKELQYTSSSPVDIQDNMEANQEPKQHSFNPFRNLFS 446
Query: 61 HLWSKQRQRDDFPREHVKQNVQPSPFLPKITMVGISTGEAGHMSKANLKKTMEDLTRELE 120
HLWS++RQRDD P+E KQNVQPSPFLPKITMVGISTGE+GHMSKANLKKTMEDLTRELE
Sbjct: 447 HLWSRRRQRDDLPQEQAKQNVQPSPFLPKITMVGISTGESGHMSKANLKKTMEDLTRELE 506
Query: 121 HIDQGNAGSLCEYDINNEERDPLFVANVSHFCSGLAKAGSARWVRGND 169
++DQGNA + EY++NNEERDPLFVANVSHF SGLAKAGSARWVRGND
Sbjct: 507 NVDQGNAANHNEYELNNEERDPLFVANVSHFSSGLAKAGSARWVRGND 554
BLAST of Sgr021200 vs. ExPASy TrEMBL
Match:
A0A5D3C3X0 (Tic22-like family protein isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00910 PE=4 SV=1)
HSP 1 Score: 283.1 bits (723), Expect = 7.6e-73
Identity = 142/168 (84.52%), Postives = 149/168 (88.69%), Query Frame = 0
Query: 1 TAASLLRISESASGLTNSESVKDTKELQYYSSSPLNIEDNREDNQEPKQHSFNPFRNWFS 60
+AASLLRI ESASGLTNSESVK+TKELQ SSSPLN +DNRE NQEPKQHSFNPFRNWF
Sbjct: 387 SAASLLRIQESASGLTNSESVKETKELQCNSSSPLNTQDNREANQEPKQHSFNPFRNWFG 446
Query: 61 HLWSKQRQRDDFPREHVKQNVQPSPFLPKITMVGISTGEAGHMSKANLKKTMEDLTRELE 120
HLWSKQRQRDDF +E K NVQPSPFLPKITMVGISTGE+ H SKANLKK MEDLTRELE
Sbjct: 447 HLWSKQRQRDDFSKERTKHNVQPSPFLPKITMVGISTGESAHTSKANLKKKMEDLTRELE 506
Query: 121 HIDQGNAGSLCEYDINNEERDPLFVANVSHFCSGLAKAGSARWVRGND 169
HIDQ NA S EY+ NNEERDPLFVANVSHF SGL+KAGSARWVRGND
Sbjct: 507 HIDQANAASHNEYEFNNEERDPLFVANVSHFSSGLSKAGSARWVRGND 554
BLAST of Sgr021200 vs. ExPASy TrEMBL
Match:
A0A6J1DXS3 (uncharacterized protein LOC111024477 OS=Momordica charantia OX=3673 GN=LOC111024477 PE=4 SV=1)
HSP 1 Score: 282.0 bits (720), Expect = 1.7e-72
Identity = 142/168 (84.52%), Postives = 156/168 (92.86%), Query Frame = 0
Query: 1 TAASLLRISESASGLTNSESVKDTKELQYYSSSPLNIEDNREDNQEPKQHSFNPFRNWFS 60
+AASLLRISESAS LT+S+SVKD+KELQ YSSSPLNI+DNRE +Q PKQHSFNPF+NWFS
Sbjct: 387 SAASLLRISESASSLTDSKSVKDSKELQ-YSSSPLNIQDNREASQAPKQHSFNPFQNWFS 446
Query: 61 HLWSKQRQRDDFPREHVKQNVQPSPFLPKITMVGISTGEAGHMSKANLKKTMEDLTRELE 120
HLWSKQ+QR+D PRE +KQNVQPSPFLPKITMVGISTGE+G+MSKANLKKTMEDLTRELE
Sbjct: 447 HLWSKQKQRNDVPREPMKQNVQPSPFLPKITMVGISTGESGNMSKANLKKTMEDLTRELE 506
Query: 121 HIDQGNAGSLCEYDINNEERDPLFVANVSHFCSGLAKAGSARWVRGND 169
HIDQGNA Y+ N+EERDPLFVANVSHFCSGLAKAGSARWVRGND
Sbjct: 507 HIDQGNAACHTGYEFNDEERDPLFVANVSHFCSGLAKAGSARWVRGND 553
BLAST of Sgr021200 vs. TAIR 10
Match:
AT5G62650.1 (Tic22-like family protein )
HSP 1 Score: 126.7 bits (317), Expect = 1.7e-29
Identity = 85/176 (48.30%), Postives = 103/176 (58.52%), Query Frame = 0
Query: 1 TAASLLRISESASGLTNSESVKDTKELQYYSSSPLNIEDNREDNQEPK-QHSFNPFRNWF 60
+A S+ R S SA+ DT S+S L +ED+ E + QH + PF +W
Sbjct: 358 SAFSIQRASGSATRCLGDSVEADT------SASLLRVEDDSPSEAEKRQQHLWFPFGDWI 417
Query: 61 SHLWSKQR------QRDDFPREHVKQNVQPSPFLPKITMVGISTGEAGHMSKANLKKTME 120
SH S++ D E ++ + SPFLPKITMVGISTGEA MSKANLKKTME
Sbjct: 418 SHSVSRKEHTHHKGSSDQRDMESREREMLRSPFLPKITMVGISTGEAAQMSKANLKKTME 477
Query: 121 DLTRELEHIDQGNAGSLCEYD-INNEERDPLFVANVSHFCSGLAKAGSARWVRGND 169
DLT +LE D+GN YD + EERDPLFVANV + SGLAKAGSAR R D
Sbjct: 478 DLTEDLEQSDEGNDHGSKRYDSLKIEERDPLFVANVGDYYSGLAKAGSARLSRRGD 527
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038874545.1 | 8.0e-77 | 86.31 | uncharacterized protein LOC120067161 isoform X1 [Benincasa hispida] | [more] |
XP_038874546.1 | 8.0e-77 | 86.31 | uncharacterized protein LOC120067161 isoform X2 [Benincasa hispida] | [more] |
XP_004145902.1 | 1.7e-74 | 86.31 | uncharacterized protein LOC101215938 [Cucumis sativus] >KGN49918.1 hypothetical ... | [more] |
KAG7035648.1 | 2.8e-74 | 85.71 | hypothetical protein SDJN02_02446 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_022958481.1 | 2.8e-74 | 85.71 | uncharacterized protein LOC111459695 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KK08 | 8.1e-75 | 86.31 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G140440 PE=4 SV=1 | [more] |
A0A6J1H266 | 1.4e-74 | 85.71 | uncharacterized protein LOC111459695 OS=Cucurbita moschata OX=3662 GN=LOC1114596... | [more] |
A0A6J1K5H1 | 8.9e-74 | 84.52 | uncharacterized protein LOC111491342 OS=Cucurbita maxima OX=3661 GN=LOC111491342... | [more] |
A0A5D3C3X0 | 7.6e-73 | 84.52 | Tic22-like family protein isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
A0A6J1DXS3 | 1.7e-72 | 84.52 | uncharacterized protein LOC111024477 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
Match Name | E-value | Identity | Description | |
AT5G62650.1 | 1.7e-29 | 48.30 | Tic22-like family protein | [more] |