Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTATGAACTTTGGAGAGGTGGGGAGGAGATTCAAGCAGTTGAATGTCATGGGTGAGAAGTTGGAAGTAAGAATCCATTACTACGAAACCAAAGTTCAAAACATAATTATTGCCTATTTCATTTGGGCAAGAGTTTTCTTCTTCGCCATCTCTCGTTCCTCCCTTGCCTGCAATGATTGGTGGGTGACTTTTACTCTAAATTTCATGTGCACCTTCGTTTACTTCGTGCTTTTTCTAGATGCCGCCCTCATGCTGTATCGAACGGAGCATCAACTCCACATGATGTATCGAGAACAGGCTGAACTTTATCGAAAAATCTGTATTGCTAAAGAAAAAGCTAATGTGATGAGTCCATCGTCAATGGAGGCCGGATATCACTCAAGTCAAGAAGTCGAGTTTACTCAGGAGACAATGCTCACAAATTCAAATTATACTGGATGTAGGAGGGGTGTGGAGAGAAAAGTTTACATTTACTCTATTTGCAGTGCTTTGGTTGGTGTTGCAGCAATAGAGTTATATGCATGTAAGTTTCTGGTGTGCAACTGA
mRNA sequence
ATGACTATGAACTTTGGAGAGGTGGGGAGGAGATTCAAGCAGTTGAATGTCATGGGTGAGAAGTTGGAAGTAAGAATCCATTACTACGAAACCAAAGTTCAAAACATAATTATTGCCTATTTCATTTGGGCAAGAGTTTTCTTCTTCGCCATCTCTCGTTCCTCCCTTGCCTGCAATGATTGGTGGGTGACTTTTACTCTAAATTTCATGTGCACCTTCGTTTACTTCGTGCTTTTTCTAGATGCCGCCCTCATGCTGTATCGAACGGAGCATCAACTCCACATGATGTATCGAGAACAGGCTGAACTTTATCGAAAAATCTGTATTGCTAAAGAAAAAGCTAATGTGATGAGTCCATCGTCAATGGAGGCCGGATATCACTCAAGTCAAGAAGTCGAGTTTACTCAGGAGACAATGCTCACAAATTCAAATTATACTGGATGTAGGAGGGGTGTGGAGAGAAAAGTTTACATTTACTCTATTTGCAGTGCTTTGGTTGGTGTTGCAGCAATAGAGTTATATGCATGTAAGTTTCTGGTGTGCAACTGA
Coding sequence (CDS)
ATGACTATGAACTTTGGAGAGGTGGGGAGGAGATTCAAGCAGTTGAATGTCATGGGTGAGAAGTTGGAAGTAAGAATCCATTACTACGAAACCAAAGTTCAAAACATAATTATTGCCTATTTCATTTGGGCAAGAGTTTTCTTCTTCGCCATCTCTCGTTCCTCCCTTGCCTGCAATGATTGGTGGGTGACTTTTACTCTAAATTTCATGTGCACCTTCGTTTACTTCGTGCTTTTTCTAGATGCCGCCCTCATGCTGTATCGAACGGAGCATCAACTCCACATGATGTATCGAGAACAGGCTGAACTTTATCGAAAAATCTGTATTGCTAAAGAAAAAGCTAATGTGATGAGTCCATCGTCAATGGAGGCCGGATATCACTCAAGTCAAGAAGTCGAGTTTACTCAGGAGACAATGCTCACAAATTCAAATTATACTGGATGTAGGAGGGGTGTGGAGAGAAAAGTTTACATTTACTCTATTTGCAGTGCTTTGGTTGGTGTTGCAGCAATAGAGTTATATGCATGTAAGTTTCTGGTGTGCAACTGA
Protein sequence
MTMNFGEVGRRFKQLNVMGEKLEVRIHYYETKVQNIIIAYFIWARVFFFAISRSSLACNDWWVTFTLNFMCTFVYFVLFLDAALMLYRTEHQLHMMYREQAELYRKICIAKEKANVMSPSSMEAGYHSSQEVEFTQETMLTNSNYTGCRRGVERKVYIYSICSALVGVAAIELYACKFLVCN
Homology
BLAST of Sgr021190 vs. NCBI nr
Match:
KAG6579345.1 (hypothetical protein SDJN03_23793, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 154.5 bits (389), Expect = 9.1e-34
Identity = 85/184 (46.20%), Postives = 124/184 (67.39%), Query Frame = 0
Query: 7 EVGRRFKQLNVMGEKLEVRIHYYETKVQNIIIAYFIWARVFFFAISR-------SSLACN 66
E+ + +++ MGE +E +++YY+TK+ NII+AYF+W RVFFF IS+ S+L+CN
Sbjct: 9 ELKKMMEEVQGMGENVEAKVNYYDTKLHNIIVAYFVWERVFFFGISKKTFPPTISTLSCN 68
Query: 67 -DWWVTFTLNFMCTFVYFVLFLDAALMLYRTEHQLHMMYREQAELYRKICIAKEKANVMS 126
+WWV L+ C+FVY +LF D ALMLYR E+QLH++ ++ A+L R + KE+ +
Sbjct: 69 GNWWVILALSSSCSFVYVLLFFDTALMLYRHENQLHLILQKHAQLCRHLLAIKEEQADIK 128
Query: 127 PSSMEAGYHSSQEVEFTQETMLTNSNYT-GCRRGVERKVYIYSICSALVGVAAIELYACK 182
S MEAG +S + +E ML NS RR ERKVY+Y+I AL+GVA++ELYACK
Sbjct: 129 ASLMEAGDEASHGLSLEEELMLINSTSPFRRRRPWERKVYVYTIFCALIGVASLELYACK 188
BLAST of Sgr021190 vs. NCBI nr
Match:
KAG6579352.1 (hypothetical protein SDJN03_23800, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 152.5 bits (384), Expect = 3.4e-33
Identity = 85/188 (45.21%), Postives = 124/188 (65.96%), Query Frame = 0
Query: 3 MNFGEVGRRFKQLNVMGEKLEVRIHYYETKVQNIIIAYFIWARVFFFAISR-------SS 62
M E+ + +++ MGEK+E +++YY+TK+ II+AYF+W RVFFF IS+ S+
Sbjct: 1 MEVEELKKMMEEVQGMGEKVEAKVNYYDTKLHTIIVAYFVWERVFFFGISKKTFPSTIST 60
Query: 63 LACN-DWWVTFTLNFMCTFVYFVLFLDAALMLYRTEHQLHMMYREQAELYRKICIAKEKA 122
L+CN +WWV L+ C+FVY +LF DAALMLYR E+QLH++ ++ A+L R + KE+
Sbjct: 61 LSCNGNWWVILALSCSCSFVYVLLFFDAALMLYRHENQLHLILQKHAQLCRHLLAIKEEQ 120
Query: 123 NVMSPSSMEAGYHSSQEVEFTQETMLTNSNYT-GCRRGVERKVYIYSICSALVGVAAIEL 182
S MEAG +S + +E ML NS RR ERKV++Y+I A +GVA++EL
Sbjct: 121 ADTKASLMEAGDQASHGLSLEEELMLINSTSPFRRRRPWERKVHVYTIFCAFIGVASLEL 180
BLAST of Sgr021190 vs. NCBI nr
Match:
XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])
HSP 1 Score: 145.2 bits (365), Expect = 5.5e-31
Identity = 87/183 (47.54%), Postives = 121/183 (66.12%), Query Frame = 0
Query: 3 MNFGEVGRRFKQLNVMGEKLEVRIHYYETKVQNIIIAYFIWARVFFFAISR--SSLACND 62
M GE+ R+F++L + EK E R+ YYETKVQNI+ Y I+ R+FFF IS+ SS C D
Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60
Query: 63 WWVTFTLNFMCTFVYFVLFLDAALMLYRTEHQLHMMYREQAELYRKICIAKEKANVMSPS 122
WWV L+ +C+F+YF+LFLDA ML+RT++QL ++ +E EL+++I ++K + +V
Sbjct: 61 WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDV--GL 120
Query: 123 SMEAGYHSSQEVEF-TQETMLTNSNYTGCRRGVERKVYIYSICSALVGVAAIELYACKFL 182
SME G SS EF E ML ++ R V RKVYIY SAL+ V AIELY K++
Sbjct: 121 SMETG-ESSGGFEFGFHEKMLMLDHF----RIVGRKVYIYFTVSALLAVTAIELYVSKYV 176
BLAST of Sgr021190 vs. NCBI nr
Match:
XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia])
HSP 1 Score: 141.0 bits (354), Expect = 1.0e-29
Identity = 83/183 (45.36%), Postives = 118/183 (64.48%), Query Frame = 0
Query: 3 MNFGEVGRRFKQLNVMGEKLEVRIHYYETKVQNIIIAYFIWARVFFFAISRSS---LACN 62
M FGE+ R F+ L + EK E R+ Y+E++ QNI +AY IW R+FFFAIS++S L C
Sbjct: 1 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60
Query: 63 DWWVTFTLNFMCTFVYFVLFLDAALMLYRTEHQLHMMYREQAELYRKICIAKEKANVMSP 122
DWW+ L+ C FVYF+ FL+A MLYR +HQ+ ++ +EQAE+ ++I +A+ + + +
Sbjct: 61 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVD- 120
Query: 123 SSMEAGYHSSQEVEFTQETMLTNSNYTGCRRGVERKVYIYSICSALVGVAAIELYACKFL 182
+MEAG SS +F+ L G R VERK YI + SAL+ V AIELYAC +L
Sbjct: 121 LAMEAG-DSSDGFQFSFHVKLLE---YGAFRIVERKFYICATVSALLAVTAIELYACSWL 178
BLAST of Sgr021190 vs. NCBI nr
Match:
KAG6579344.1 (hypothetical protein SDJN03_23792, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 132.9 bits (333), Expect = 2.8e-27
Identity = 77/189 (40.74%), Postives = 119/189 (62.96%), Query Frame = 0
Query: 7 EVGRRFKQLNVMGEKLEVRIHYYETKVQNIIIAYFIWARVFF------------FAISRS 66
++ +R +++ M EK+E R++YY+TK+ II+AY +W RVFF FA + S
Sbjct: 6 QMEKRMEEVKGMWEKVEGRVNYYDTKLHAIIVAYLVWERVFFFFFFFFGVSNTNFASNIS 65
Query: 67 SLACN-DWWVTFTLNFMCTFVYFVLFLDAALMLYRTEHQLHMMYREQAELYRKICIAKEK 126
+L+CN WWV L+ +C+FVY +LF+DAALMLY ++QL+++ + +LYR++ K+
Sbjct: 66 TLSCNGKWWVIVALSCLCSFVYMLLFVDAALMLYPHQNQLNLILQTHHQLYRQLLAIKD- 125
Query: 127 ANVMSPSSMEAGYHSSQEVEFTQETMLTNSNYTGCRRGVERKVYIYSICSALVGVAAIEL 183
S MEAG +S + +E ML NSN RR RK Y+Y+I AL+ VA++EL
Sbjct: 126 ------SLMEAGDEASHGLSLEEELMLINSNAAYRRRPWGRKFYVYTIFCALIDVASLEL 185
BLAST of Sgr021190 vs. ExPASy TrEMBL
Match:
A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)
HSP 1 Score: 145.2 bits (365), Expect = 2.7e-31
Identity = 87/183 (47.54%), Postives = 121/183 (66.12%), Query Frame = 0
Query: 3 MNFGEVGRRFKQLNVMGEKLEVRIHYYETKVQNIIIAYFIWARVFFFAISR--SSLACND 62
M GE+ R+F++L + EK E R+ YYETKVQNI+ Y I+ R+FFF IS+ SS C D
Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60
Query: 63 WWVTFTLNFMCTFVYFVLFLDAALMLYRTEHQLHMMYREQAELYRKICIAKEKANVMSPS 122
WWV L+ +C+F+YF+LFLDA ML+RT++QL ++ +E EL+++I ++K + +V
Sbjct: 61 WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDV--GL 120
Query: 123 SMEAGYHSSQEVEF-TQETMLTNSNYTGCRRGVERKVYIYSICSALVGVAAIELYACKFL 182
SME G SS EF E ML ++ R V RKVYIY SAL+ V AIELY K++
Sbjct: 121 SMETG-ESSGGFEFGFHEKMLMLDHF----RIVGRKVYIYFTVSALLAVTAIELYVSKYV 176
BLAST of Sgr021190 vs. ExPASy TrEMBL
Match:
A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)
HSP 1 Score: 141.0 bits (354), Expect = 5.0e-30
Identity = 83/183 (45.36%), Postives = 118/183 (64.48%), Query Frame = 0
Query: 3 MNFGEVGRRFKQLNVMGEKLEVRIHYYETKVQNIIIAYFIWARVFFFAISRSS---LACN 62
M FGE+ R F+ L + EK E R+ Y+E++ QNI +AY IW R+FFFAIS++S L C
Sbjct: 1 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60
Query: 63 DWWVTFTLNFMCTFVYFVLFLDAALMLYRTEHQLHMMYREQAELYRKICIAKEKANVMSP 122
DWW+ L+ C FVYF+ FL+A MLYR +HQ+ ++ +EQAE+ ++I +A+ + + +
Sbjct: 61 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVD- 120
Query: 123 SSMEAGYHSSQEVEFTQETMLTNSNYTGCRRGVERKVYIYSICSALVGVAAIELYACKFL 182
+MEAG SS +F+ L G R VERK YI + SAL+ V AIELYAC +L
Sbjct: 121 LAMEAG-DSSDGFQFSFHVKLLE---YGAFRIVERKFYICATVSALLAVTAIELYACSWL 178
BLAST of Sgr021190 vs. ExPASy TrEMBL
Match:
A0A6J1DX74 (uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023953 PE=4 SV=1)
HSP 1 Score: 129.4 bits (324), Expect = 1.5e-26
Identity = 81/181 (44.75%), Postives = 112/181 (61.88%), Query Frame = 0
Query: 3 MNFGEVGRRFKQLNVMGEKLEVRIHYYETKVQNIIIAYFIWARVFFFAISR-SSLACNDW 62
M GE+ R+F +L + EK E R+ Y+E K Q I+ Y I R+FFF IS+ SS C+DW
Sbjct: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDW 60
Query: 63 WVTFTLNFMCTFVYFVLFLDAALMLYRTEHQLHMMYREQAELYRKICIAKEKANVMSPSS 122
WV +L+ +C+FVYF+LFLDAA LY+T+ QL M+ +E E+ ++I +A+ + +V +
Sbjct: 61 WVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDV--DLA 120
Query: 123 MEAGYHSSQEVEFTQETMLTNSNYTGCRRGVERKVYIYSICSALVGVAAIELYACKFLVC 182
ME G S E ML ++ R V RKVYIY ALV V AIELY K+L+C
Sbjct: 121 MEGGDFSDGFEFGFHEKMLVLDHF----RFVGRKVYIYFTVCALVAVTAIELYVSKYLLC 175
BLAST of Sgr021190 vs. ExPASy TrEMBL
Match:
A0A5A7TMJ1 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00790 PE=4 SV=1)
HSP 1 Score: 122.1 bits (305), Expect = 2.4e-24
Identity = 74/177 (41.81%), Postives = 101/177 (57.06%), Query Frame = 0
Query: 6 GEVGRRFKQLNVMGEKLEVRIHYYETKVQNIIIAYFIWARVFFFAISRSSLACNDWWVTF 65
G++ R F L + + E + Y ETK+QN+++ Y W R+FFF +S S C DWWV
Sbjct: 48 GDLRRNFVLLKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFGVS-FSFKCKDWWVIL 107
Query: 66 TLNFMCTFVYFVLFLDAALMLYRTEHQLHMMYREQAELYRKICIAKEKANVMSPSSMEAG 125
L TF YF+LF+DA +ML RT QL ++ +E AE+ ++I +A+ + NV SMEAG
Sbjct: 108 ALTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQILVAQNQDNV--GLSMEAG 167
Query: 126 YHSSQEVEFTQETMLTNSNYTGCRRGVERKVYIYSICSALVGVAAIELYACKFLVCN 183
S E M + G RKVYIY I L+ + AIELYACK L+CN
Sbjct: 168 EDSDGFELSFHERMFMLDQFRVVETG--RKVYIYFIVCPLLAITAIELYACKCLLCN 219
BLAST of Sgr021190 vs. ExPASy TrEMBL
Match:
A0A6J1DTV6 (uncharacterized protein LOC111023951 OS=Momordica charantia OX=3673 GN=LOC111023951 PE=4 SV=1)
HSP 1 Score: 117.1 bits (292), Expect = 7.8e-23
Identity = 72/168 (42.86%), Postives = 107/168 (63.69%), Query Frame = 0
Query: 10 RRFKQLNVMGEKLEVRIHYYETKVQNIIIAYFIWARVFFFAISRSS--LACNDWWVTFTL 69
R F++L ++ EK E + +YE++ QNI + Y IW R FFFA+S++S L C DW V L
Sbjct: 8 RDFEELKLLAEKQEPILRFYESRAQNITMGYLIWERFFFFALSQTSSPLKCIDWRVVLGL 67
Query: 70 NFMCTFVYFVLFLDAALMLYRTEHQLHMMYREQAELYRKICIAKEKANVMSPSSMEAGYH 129
+ +C+FVYF+LFL+A MLYRT++Q+ M+ +EQ+++ ++I A + + S+MEAG
Sbjct: 68 SLVCSFVYFLLFLEAVTMLYRTQNQMDMICKEQSDICQQILDAGNQDD--GGSAMEAGDL 127
Query: 130 SSQEVEFTQETMLTNSNYTGCRRGVERKVYIYSICSALVGVAAIELYA 176
S M T NY R ++KVYI +I S+LV V A+ELYA
Sbjct: 128 SDGVAFNFSFHMRTTLNYDYSFRIFQKKVYISAIISSLVAVTALELYA 173
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6579345.1 | 9.1e-34 | 46.20 | hypothetical protein SDJN03_23793, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6579352.1 | 3.4e-33 | 45.21 | hypothetical protein SDJN03_23800, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022157182.1 | 5.5e-31 | 47.54 | uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... | [more] |
XP_022157130.1 | 1.0e-29 | 45.36 | uncharacterized protein LOC111023927 [Momordica charantia] | [more] |
KAG6579344.1 | 2.8e-27 | 40.74 | hypothetical protein SDJN03_23792, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DSQ0 | 2.7e-31 | 47.54 | uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DS87 | 5.0e-30 | 45.36 | uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DX74 | 1.5e-26 | 44.75 | uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A5A7TMJ1 | 2.4e-24 | 41.81 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A6J1DTV6 | 7.8e-23 | 42.86 | uncharacterized protein LOC111023951 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
Match Name | E-value | Identity | Description | |