Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACTTGGAGAGCTGAGGAATTTTGAGGAGTTGAAACTTGTTAGCGAGAAGCAAGAATCAAGGGTGCGTTACCATGAAACCAAAGTCCAGAACATTGTTGTTGCCTACCTCATTTGGGAGCGCTTATTCTTTTTTGCGATCTTTCAGACTTCTTCATTCCTCAAGTGCAATGATTGGTGGGTCATTTTGGCTATAAATCTTTCGTGTACCTTTGTCTACTTTTTACTTTTTCTGGATGCTGTCACTATGTTATATCGGACCCAGTACCAGTTAGACATAATCTGCAAGGAACTGACCGAAATTTGCCAACAAATTTTGGTAGCCAAAAACCAAGATGATGGGGGTCTAATGGAGGCTGGAGAATCTAGTGATGGATTTGAATTCGGTTTCCATGAGAAGATGCTCATGTTTGAACGTTTTAGAATTGTTGGGAGGAAAGTTTACATCTACTTCACTGTCTGTGCTTTGCTTGCTGTTACTTCTATTGAATTATATGCTTGCAAGTACTTGTTATGCAACTGA
mRNA sequence
ATGGCACTTGGAGAGCTGAGGAATTTTGAGGAGTTGAAACTTGTTAGCGAGAAGCAAGAATCAAGGGTGCGTTACCATGAAACCAAAGTCCAGAACATTGTTGTTGCCTACCTCATTTGGGAGCGCTTATTCTTTTTTGCGATCTTTCAGACTTCTTCATTCCTCAAGTGCAATGATTGGTGGGTCATTTTGGCTATAAATCTTTCGTGTACCTTTGTCTACTTTTTACTTTTTCTGGATGCTGTCACTATGTTATATCGGACCCAGTACCAGTTAGACATAATCTGCAAGGAACTGACCGAAATTTGCCAACAAATTTTGGTAGCCAAAAACCAAGATGATGGGGGTCTAATGGAGGCTGGAGAATCTAGTGATGGATTTGAATTCGGTTTCCATGAGAAGATGCTCATGTTTGAACGTTTTAGAATTGTTGGGAGGAAAGTTTACATCTACTTCACTGTCTGTGCTTTGCTTGCTGTTACTTCTATTGAATTATATGCTTGCAAGTACTTGTTATGCAACTGA
Coding sequence (CDS)
ATGGCACTTGGAGAGCTGAGGAATTTTGAGGAGTTGAAACTTGTTAGCGAGAAGCAAGAATCAAGGGTGCGTTACCATGAAACCAAAGTCCAGAACATTGTTGTTGCCTACCTCATTTGGGAGCGCTTATTCTTTTTTGCGATCTTTCAGACTTCTTCATTCCTCAAGTGCAATGATTGGTGGGTCATTTTGGCTATAAATCTTTCGTGTACCTTTGTCTACTTTTTACTTTTTCTGGATGCTGTCACTATGTTATATCGGACCCAGTACCAGTTAGACATAATCTGCAAGGAACTGACCGAAATTTGCCAACAAATTTTGGTAGCCAAAAACCAAGATGATGGGGGTCTAATGGAGGCTGGAGAATCTAGTGATGGATTTGAATTCGGTTTCCATGAGAAGATGCTCATGTTTGAACGTTTTAGAATTGTTGGGAGGAAAGTTTACATCTACTTCACTGTCTGTGCTTTGCTTGCTGTTACTTCTATTGAATTATATGCTTGCAAGTACTTGTTATGCAACTGA
Protein sequence
MALGELRNFEELKLVSEKQESRVRYHETKVQNIVVAYLIWERLFFFAIFQTSSFLKCNDWWVILAINLSCTFVYFLLFLDAVTMLYRTQYQLDIICKELTEICQQILVAKNQDDGGLMEAGESSDGFEFGFHEKMLMFERFRIVGRKVYIYFTVCALLAVTSIELYACKYLLCN
Homology
BLAST of Sgr021174 vs. NCBI nr
Match:
XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])
HSP 1 Score: 256.9 bits (655), Expect = 1.2e-64
Identity = 137/176 (77.84%), Postives = 151/176 (85.80%), Query Frame = 0
Query: 1 MALGEL-RNFEELKLVSEKQESRVRYHETKVQNIVVAYLIWERLFFFAIFQTSSFLKCND 60
MALGEL R FEELK ++EKQESRVRY+ETKVQNIV YLI+ RLFFF I QTSS C D
Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60
Query: 61 WWVILAINLSCTFVYFLLFLDAVTMLYRTQYQLDIICKELTEICQQILVAKNQDDGGL-M 120
WWVILA++L C+F+YFLLFLDAV ML+RTQYQLDIICKEL E+ QQILV+KNQDD GL M
Sbjct: 61 WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120
Query: 121 EAGESSDGFEFGFHEKMLMFERFRIVGRKVYIYFTVCALLAVTSIELYACKYLLCN 175
E GESS GFEFGFHEKMLM + FRIVGRKVYIYFTV ALLAVT+IELY KY+LCN
Sbjct: 121 ETGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176
BLAST of Sgr021174 vs. NCBI nr
Match:
XP_022157176.1 (uncharacterized protein LOC111023953 isoform X2 [Momordica charantia])
HSP 1 Score: 238.4 bits (607), Expect = 4.6e-59
Identity = 128/176 (72.73%), Postives = 146/176 (82.95%), Query Frame = 0
Query: 1 MALGEL-RNFEELKLVSEKQESRVRYHETKVQNIVVAYLIWERLFFFAIFQTSSFLKCND 60
MA+GEL R F ELK ++EKQESRVRYHE K Q IV YLI RLFFF I QTSS KC+D
Sbjct: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSS-SKCHD 60
Query: 61 WWVILAINLSCTFVYFLLFLDAVTMLYRTQYQLDIICKELTEICQQILVAKNQDDGGL-M 120
WWVIL+++L C+FVYFLLFLDA T LY+T+ QLD+ICKEL E+CQQILVA+NQDD L M
Sbjct: 61 WWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAM 120
Query: 121 EAGESSDGFEFGFHEKMLMFERFRIVGRKVYIYFTVCALLAVTSIELYACKYLLCN 175
E G+ SDGFEFGFHEKML+ + FR VGRKVYIYFTVCAL+AVT+IELY KYLLCN
Sbjct: 121 EGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175
BLAST of Sgr021174 vs. NCBI nr
Match:
KAG6579338.1 (hypothetical protein SDJN03_23786, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 225.3 bits (573), Expect = 4.0e-55
Identity = 121/174 (69.54%), Postives = 139/174 (79.89%), Query Frame = 0
Query: 1 MALGEL-RNFEELKLVSEKQESRVRYHETKVQNIVVAYLIWERLFFFAIFQTSSFLKCND 60
MA GEL R F+EL V+EKQE++V YH+ KVQNIV YLIW RLF + I Q SF KCN+
Sbjct: 1 MAHGELKRRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQALSF-KCNN 60
Query: 61 WWVILAINLSCTFVYFLLFLDAVTMLYRTQYQLDIICKELTEICQQILVAKNQDDGGLME 120
WWVILA++L F+YFLLFLDA+TML+R QYQLDIICKEL E CQQ L+ KN+DD L+E
Sbjct: 61 WWVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDLVE 120
Query: 121 AGESSDGFEFGFHEKMLMFERFRIVGRKVYIYFTVCALLAVTSIELYACKYLLC 174
AGES DGFEFGFH+KMLM + IVGR VYIYF VCALLAV +IELYA KYLLC
Sbjct: 121 AGESRDGFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLC 173
BLAST of Sgr021174 vs. NCBI nr
Match:
KAG7016840.1 (hypothetical protein SDJN02_21951, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 222.2 bits (565), Expect = 3.4e-54
Identity = 120/174 (68.97%), Postives = 138/174 (79.31%), Query Frame = 0
Query: 1 MALGEL-RNFEELKLVSEKQESRVRYHETKVQNIVVAYLIWERLFFFAIFQTSSFLKCND 60
MA GEL R +EL V+EKQE++V YH+ KVQNIV YLIW RLFF+ I Q SF KCN+
Sbjct: 36 MAHGELKRRIKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFFYGISQALSF-KCNN 95
Query: 61 WWVILAINLSCTFVYFLLFLDAVTMLYRTQYQLDIICKELTEICQQILVAKNQDDGGLME 120
WWVILA++L F+YFLLFLDA+TML+R QYQLDIICKEL E CQQ L+ KN+DD L+E
Sbjct: 96 WWVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDLVE 155
Query: 121 AGESSDGFEFGFHEKMLMFERFRIVGRKVYIYFTVCALLAVTSIELYACKYLLC 174
AGES D FEFGFH+KMLM + IVGR VYIYF VCALLAV +IELYA KYLLC
Sbjct: 156 AGESCDRFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLC 208
BLAST of Sgr021174 vs. NCBI nr
Match:
XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia])
HSP 1 Score: 219.5 bits (558), Expect = 2.2e-53
Identity = 121/178 (67.98%), Postives = 143/178 (80.34%), Query Frame = 0
Query: 1 MALGEL-RNFEELKLVSEKQESRVRYHETKVQNIVVAYLIWERLFFFAIFQT-SSFLKCN 60
M GEL RNFE LK + EKQESRV+YHE++ QNI +AYLIW RLFFFAI QT SS LKC
Sbjct: 1 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60
Query: 61 DWWVILAINLSCTFVYFLLFLDAVTMLYRTQYQLDIICKELTEICQQILVAKNQ-DDGGL 120
DWW++L +++SC FVYFL FL+AVTMLYR Q+Q+DIICKE EICQQILVA++Q DD L
Sbjct: 61 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 120
Query: 121 -MEAGESSDGFEFGFHEKMLMFERFRIVGRKVYIYFTVCALLAVTSIELYACKYLLCN 175
MEAG+SSDGF+F FH K+L + FRIV RK YI TV ALLAVT+IELYAC +L C+
Sbjct: 121 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYCD 178
BLAST of Sgr021174 vs. ExPASy TrEMBL
Match:
A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)
HSP 1 Score: 256.9 bits (655), Expect = 6.0e-65
Identity = 137/176 (77.84%), Postives = 151/176 (85.80%), Query Frame = 0
Query: 1 MALGEL-RNFEELKLVSEKQESRVRYHETKVQNIVVAYLIWERLFFFAIFQTSSFLKCND 60
MALGEL R FEELK ++EKQESRVRY+ETKVQNIV YLI+ RLFFF I QTSS C D
Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60
Query: 61 WWVILAINLSCTFVYFLLFLDAVTMLYRTQYQLDIICKELTEICQQILVAKNQDDGGL-M 120
WWVILA++L C+F+YFLLFLDAV ML+RTQYQLDIICKEL E+ QQILV+KNQDD GL M
Sbjct: 61 WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120
Query: 121 EAGESSDGFEFGFHEKMLMFERFRIVGRKVYIYFTVCALLAVTSIELYACKYLLCN 175
E GESS GFEFGFHEKMLM + FRIVGRKVYIYFTV ALLAVT+IELY KY+LCN
Sbjct: 121 ETGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176
BLAST of Sgr021174 vs. ExPASy TrEMBL
Match:
A0A6J1DX74 (uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023953 PE=4 SV=1)
HSP 1 Score: 238.4 bits (607), Expect = 2.2e-59
Identity = 128/176 (72.73%), Postives = 146/176 (82.95%), Query Frame = 0
Query: 1 MALGEL-RNFEELKLVSEKQESRVRYHETKVQNIVVAYLIWERLFFFAIFQTSSFLKCND 60
MA+GEL R F ELK ++EKQESRVRYHE K Q IV YLI RLFFF I QTSS KC+D
Sbjct: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSS-SKCHD 60
Query: 61 WWVILAINLSCTFVYFLLFLDAVTMLYRTQYQLDIICKELTEICQQILVAKNQDDGGL-M 120
WWVIL+++L C+FVYFLLFLDA T LY+T+ QLD+ICKEL E+CQQILVA+NQDD L M
Sbjct: 61 WWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAM 120
Query: 121 EAGESSDGFEFGFHEKMLMFERFRIVGRKVYIYFTVCALLAVTSIELYACKYLLCN 175
E G+ SDGFEFGFHEKML+ + FR VGRKVYIYFTVCAL+AVT+IELY KYLLCN
Sbjct: 121 EGGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175
BLAST of Sgr021174 vs. ExPASy TrEMBL
Match:
A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)
HSP 1 Score: 219.5 bits (558), Expect = 1.1e-53
Identity = 121/178 (67.98%), Postives = 143/178 (80.34%), Query Frame = 0
Query: 1 MALGEL-RNFEELKLVSEKQESRVRYHETKVQNIVVAYLIWERLFFFAIFQT-SSFLKCN 60
M GEL RNFE LK + EKQESRV+YHE++ QNI +AYLIW RLFFFAI QT SS LKC
Sbjct: 1 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60
Query: 61 DWWVILAINLSCTFVYFLLFLDAVTMLYRTQYQLDIICKELTEICQQILVAKNQ-DDGGL 120
DWW++L +++SC FVYFL FL+AVTMLYR Q+Q+DIICKE EICQQILVA++Q DD L
Sbjct: 61 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 120
Query: 121 -MEAGESSDGFEFGFHEKMLMFERFRIVGRKVYIYFTVCALLAVTSIELYACKYLLCN 175
MEAG+SSDGF+F FH K+L + FRIV RK YI TV ALLAVT+IELYAC +L C+
Sbjct: 121 AMEAGDSSDGFQFSFHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYCD 178
BLAST of Sgr021174 vs. ExPASy TrEMBL
Match:
A0A5A7TMJ1 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00790 PE=4 SV=1)
HSP 1 Score: 208.0 bits (528), Expect = 3.2e-50
Identity = 116/176 (65.91%), Postives = 136/176 (77.27%), Query Frame = 0
Query: 3 LGEL-RNFEELKLVSEKQESRVRYHETKVQNIVVAYLIWERLFFFAIFQTSSFLKCNDWW 62
LG+L RNF LK +++ QE+ +RY ETK+QN+V+ YL W RLFFF + S KC DWW
Sbjct: 47 LGDLRRNFVLLKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFGV---SFSFKCKDWW 106
Query: 63 VILAINLSCTFVYFLLFLDAVTMLYRTQYQLDIICKELTEICQQILVAKNQDDGGL-MEA 122
VILA+ L TF YFLLF+DAV ML RT QLDII KEL EICQQILVA+NQD+ GL MEA
Sbjct: 107 VILALTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQILVAQNQDNVGLSMEA 166
Query: 123 GESSDGFEFGFHEKMLMFERFRIV--GRKVYIYFTVCALLAVTSIELYACKYLLCN 175
GE SDGFE FHE+M M ++FR+V GRKVYIYF VC LLA+T+IELYACK LLCN
Sbjct: 167 GEDSDGFELSFHERMFMLDQFRVVETGRKVYIYFIVCPLLAITAIELYACKCLLCN 219
BLAST of Sgr021174 vs. ExPASy TrEMBL
Match:
A0A5A7TLI0 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00770 PE=4 SV=1)
HSP 1 Score: 203.4 bits (516), Expect = 7.9e-49
Identity = 112/181 (61.88%), Postives = 135/181 (74.59%), Query Frame = 0
Query: 1 MALGELRNFEELKLVSEKQESRVRYHETKVQNIVVAYLIWERLFFFAIFQTSSFLKCNDW 60
MA G+LR+FEE+ ++ ++QE +V YHE KVQN+V+ YL++ RL F QTS KC DW
Sbjct: 1 MASGDLRSFEEVTVIYKEQEEKVCYHENKVQNLVIGYLVFGRLLIFGFTQTSLPFKCKDW 60
Query: 61 WVILAINLSCTFVYFLLFLDAVTMLYRTQYQLDIICKELTEICQQILVAKNQDD-----G 120
WVILA+ LSCT VYF L LDAVTML RT+Y+LDII KEL EICQ+ILV++NQ D
Sbjct: 61 WVILALTLSCTLVYFSLLLDAVTMLCRTEYELDIIRKELIEICQRILVSQNQRDLVDLTQ 120
Query: 121 GLMEAGESSDGFE--FGFHEKMLMFERFRIVGRKVYIYFTVCALLAVTSIELYACKYLLC 175
MEA ESSDGF+ FGFH+KMLM + FR V RKV+IYFTV ALL V IELY KYLLC
Sbjct: 121 LTMEAEESSDGFDFGFGFHQKMLMLDHFRTVRRKVHIYFTVSALLVVVVIELYVSKYLLC 180
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022157182.1 | 1.2e-64 | 77.84 | uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... | [more] |
XP_022157176.1 | 4.6e-59 | 72.73 | uncharacterized protein LOC111023953 isoform X2 [Momordica charantia] | [more] |
KAG6579338.1 | 4.0e-55 | 69.54 | hypothetical protein SDJN03_23786, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7016840.1 | 3.4e-54 | 68.97 | hypothetical protein SDJN02_21951, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022157130.1 | 2.2e-53 | 67.98 | uncharacterized protein LOC111023927 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DSQ0 | 6.0e-65 | 77.84 | uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DX74 | 2.2e-59 | 72.73 | uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1DS87 | 1.1e-53 | 67.98 | uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A5A7TMJ1 | 3.2e-50 | 65.91 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A5A7TLI0 | 7.9e-49 | 61.88 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
Match Name | E-value | Identity | Description | |