Sgr020951 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr020951
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00153577: 920578 .. 921501 (-)
RNA-Seq Expression	Sgr020951
Synteny	Sgr020951

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCAATGGACGATCCACATCCACAAAGCGTCGCCACAAAAATAAGAGCCATGTCTTTGCTGAAAAGAGCTTGGAAGATGGTGAAATCTTCTCCTCTTTCTGGCTTGTTACATATGTTTGAGAAGCACGACGGCGAAACTTCTGTAATTTCCTCCAAAGTCGACGGCGACTTTATAGGTACGGTTTGCGACGGAGGTTTCTGCTCAGGAATTGATACGACGACAGATGGATGATCAATGATTTGTTTCTTGAGTTTGAACAGCAAGAATTCTGCTCTAATGGCGATCAAAAGGGGTAGAAGAAGCAAGCAGAAGATGACGCCGGCGCCACTCAAATAGTCAGCCTGAGAGAAAACTGCTTGTTTTTGGGTTAGGGTCAACAACAAGATAAACAACGCCAGAATTATGGATACGTAAAGCAAGTGGTAAAACACTTTGAGCTCCTCTGGATGTTTTCGGGCTTTAATTGTTCGAATTGAAAGCAAAAACACCATAGAAATAGCTGACGGGAACCATGAAAGAAGAAGAATCATAGTAGCTGCATTTTCGTTGCCGTAAATGGCTAAATTCATCTGAGTTAAGATGGCCCCTCCGATTCCAACAAAGCCCTTAAGAAGTCCAAGAATAATCCCTCGTCTCTCCGGGAAGTTTTTTACACTTGTGACCAAAACCGCGGTGTTGGCAAAGTTCTGTGAATTAGCAGCCAAGCAGATGTAAACGCACATATGCCAGAATTCTGGCTTGGCGATCCGTTGAGTGACGGAGAGCCAAATCATGATGTAGCTGCAGAAGTTGAGGGATGAGCCGACGACGAAAAGCACTGGAGGCGGAGCCACCTCGGCGAGAAGTCCGGCGAAAACTCCGAGGTTGGAGCCGAGATCTTTGGCGAATCCCAAGGTGTTAACTTGTGTTTGGGTGTAA

mRNA sequence

ATGGCGGCAATGGACGATCCACATCCACAAAGCGTCGCCACAAAAATAAGAGCCATGTCTTTGCTGAAAAGAGCTTGGAAGATGGTGAAATCTTCTCCTCTTTCTGGCTTGTTACATATGTTTGAGAAGCACGACGGCGAAACTTCTGTAATTTCCTCCAAAGTCGACGGCGACTTTATAGGTACGCTGCAGAAGTTGAGGGATGAGCCGACGACGAAAAGCACTGGAGGCGGAGCCACCTCGGCGAGAAGTCCGGCGAAAACTCCGAGGTTGGAGCCGAGATCTTTGGCGAATCCCAAGGTGTTAACTTGTGTTTGGGTGTAA

Coding sequence (CDS)

ATGGCGGCAATGGACGATCCACATCCACAAAGCGTCGCCACAAAAATAAGAGCCATGTCTTTGCTGAAAAGAGCTTGGAAGATGGTGAAATCTTCTCCTCTTTCTGGCTTGTTACATATGTTTGAGAAGCACGACGGCGAAACTTCTGTAATTTCCTCCAAAGTCGACGGCGACTTTATAGGTACGCTGCAGAAGTTGAGGGATGAGCCGACGACGAAAAGCACTGGAGGCGGAGCCACCTCGGCGAGAAGTCCGGCGAAAACTCCGAGGTTGGAGCCGAGATCTTTGGCGAATCCCAAGGTGTTAACTTGTGTTTGGGTGTAA

Protein sequence

MAAMDDPHPQSVATKIRAMSLLKRAWKMVKSSPLSGLLHMFEKHDGETSVISSKVDGDFIGTLQKLRDEPTTKSTGGGATSARSPAKTPRLEPRSLANPKVLTCVWV

Homology

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BLAST of Sgr020951 vs. ExPASy TrEMBL
Match: A0A0A0LSL1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G096360 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.0e-10
Identity = 61/154 (39.61%), Postives = 68/154 (44.16%), Query Frame = 0


Query: 19  MSLLKRAWKMVKSSPLSGLLHMFEKHDGE-TSVISSKVDGD-----------FIGTLQ-- 78
           MSLL RA K++KSSP SGLL MFE+H GE  S ISS  D D           FI  ++  
Sbjct: 1   MSLLNRACKILKSSPRSGLLTMFEQHVGEFNSGISSIGDKDSLFLVVELDEVFISGVKTA 60

Query: 79  ---------------------------------------------------KLRDEPTTK 108
                                                              KLR+EPTT 
Sbjct: 61  GDEFLSVCPLSLKSMSSSLTAINRGIRSNPIITAAPLAYPAEENAACFCETKLRNEPTTN 120

The following BLAST results are available for this feature:

BLAST of Sgr020951 vs.


Match Name	E-value	Identity	Description

BLAST of Sgr020951 vs.


Match Name	E-value	Identity	Description

BLAST of Sgr020951 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSL1	2.0e-10	39.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G096360 PE=4 SV=1	[more]

BLAST of Sgr020951 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr020951.1	Sgr020951.1	mRNA