Sgr020892 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr020892
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionMediator of RNA polymerase II transcription subunit 11
Locationtig00153574: 980032 .. 985451 (-)
RNA-Seq ExpressionSgr020892
SyntenySgr020892
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCAGCTGACCCAGAATACTTCATTACAACGACTTCAAAATGTGGAGAAGGTTGGAATAACTTTCCGTACCCTAAATTGTTTCTAATTCTTTGCATGGTCTTTTAAAGCACTAGATTTTCTTTGACGAATTTTTGTGTTTTATTCCTGCAGAGAATTGTGACGGTATTGGAGCTAGCAGGAGGAGTCATGGAAGAGCTTGCCAACCCTGCTGGTCCGAGAAAGGAAATTGTCAACAATCATTGCAGTGAGTTCATGAAATTCATCAAGGTGAGCCCCCTATGTTTGTTTGCTAGTAGTTCTTCACGTCAAATGATCTTTCAAGTTTGGATTTGAGAACTGAGATTGATATATTAGCTGGTAAGGCTTCAATGTAGAATTAGGTTATTCTGACAATTTGAGCACTTATTACATCTTTCATGGTAACTTCACTTGGAATTTTTATGAAAAGCTGACATTCAACCAACTGGTTTACAAAAATTTTTACTTTGATTAATTGTTATTTTTAAAGAATGTTATTATGTTGAATTTAATCCTATCAGAAGTCCAGATTAAATTTTATTACAAAGAAAAAGGGCTCTCCCTTGTTTCTAGTTCCTGCACAGGAAAAATATGGAATGATTGTAGAATAACTAAATGATAATTGTTGTGATTGGTCTGCATATTTTTAGTATTGTTAAAGATGGGGCATCATTGTCATGATTTCGTGTTTCATACCGATAATATCATCTCATATTTAATAGTAATTGAAGAGTATGTATGGGCATGTTTTTGAATATTCCATAACTATCAAGTGGTTAAAATAGTTATCTAATTTAGCCATACGTTCAAAATGCACTCCTAGATTTCACCTAAAATCTCTTTGAATTGTATCTGAACTCTGAAGAATAATGTCAACATTTTCTCCACCTTGAAATCAGGATATCCAAGTTACATTGCGGGATGAAATTAAAAGTGCATGTGAATACCGTCCATTTGAGAAGTGTGATTATAGTTCAAGGATAACTAATGAACTTTGCTGCAAGAAACTGGATTACATGATTTCAAAGTTGGATGGAATGAAACAGACTATCGATGAATATCAAGTGAAAGTGGAAGATGCTTGAGGCACTTGTCCTAGTGTGCTGCTAATCTAACTAATTGCCATTTTTTCCATACGAGGTTGTAGAAAAGAAATGTTGAATGAGGACTTCATTCATACATCTGATATATGAATCAGGATAGGAAAATGAGAATACAGTTCTTATATGATCAATCTTGTATCTTTGGGAAGGGATGGCTAGACTATTCATTGTTTTTTCTTATAATCTGTAGTCTATTCTGTATTTGATATGGGTTCTTATTGGGTGTATTCATTTTTTCCATCTCTTCGCATCGGTTGCCCTTGCCTGCTCAGCAAAGTGAAGGCATTCATTTATTGTTTTTGATCTTCAAATGATTGATTATAACTACTGGTCGTCTTTCTAGTTATGGCTTGGAACTACAAATCTTGTTCAATGGTGGTGGAAGAGAAAGCTCTATCCTTCATTACATAGTTTTGATGCTTATCTTTTAGTTCTTAAGCCAAAAGGGTTGATTCTTACAAGGTTGTGCTTATCATATAGAGGATATTTTGGAGAGAGGTGTTTTTTTATCATTGAGAAAAACGAAAGCAAAGGAGAGACACACTATAATCTTTTAAGTTTGGGAATAATATTCTCCCTTTTTCTCTTTCTACTTTTATGTATTTTTTTAAAATTTTTATAAGGCCATTACTATTGCTGATCACTTTCCAAAAAGTATAAGAACATTCCATACCCTGCCTACATCTTAGGACGTGAAAAGTTCATTCTAACATTGGCTTACTACTTTGTTTTGAGAGAATATTAGCAACACACTGTTACATACACCTTGTCTGGAGGAATTTTTTCTTGGCAAGCTTTATCTTTAGTACATACGATATAGAGCTCGTGTTGTGTAGCTATCAGTAGGGAGATTCTAGTGAGTTTTTGCTTATTTCCACTCAAATCACTCTACTGCCTTGCATCACCAAATTGACCTGTGGAGGTTAGGTTCAACTTTATGTTAGGAACACATTTGACATCCCGTACCAACAATTTACATCTCATATATCTTCCATGCTTGTTTCTTTTTAGATATCCTAATTCCTTATTTTTACAAGGTAATAATCACCTATAATGTAAGAATATAACATACTTTTGTTTCAAGTTACATGGATAGATGTAACACTGTCTATTGCATGCATTACATGGTTTGTAGCGTCTCTCTCACCATGATCATAAATTAGACAATCATCTATAATTAAAATTACTTTTAGAACAATATCGTAATCTCTTTGCTCATTTTGCTATTTCTATATACTATCTTTTTTTGACCCATCATATGACAATAAAAGAACATAGTCTCTTGCTTACCTTATCAATTACCATTATACCCTTATCTTTAGAAGACTCTTTGTTGACGTTTTTACCTCCTTGTCCATCGCCTTAATCGACACTTCCTATCTTTGGTTGATATTGCTTTGACAACGAATTTGTGCCCTAGCTACCTAAATTCAAGGGGGAGAAGGGAAGAATGAAAAAAGAATGATGAAAAGAGGGAAATAAAGGTGGACAAATGGTGTTTAAACTTAGATGGGACCTACCTTTGTCTGATTTTGATTTAAACTCTCAACTATATTTGGGGTAAGTAATAAGTTTGCCATGTTAGCTTATTGTATACATTAGTGTTGACATGTCACCTAATTACATAGTTTAGTCAAGCTCTGTCTAGGGATAATAATTCTGTTACGTAAGGGCTATTTAGAACTACTTCATATATTTAGGGACCAAAGAGAAACAAAAGAAAATTCAAGGACCAAAAATATAGGTTGCCCATAGTAATAAATTCTTTTGTTGTACAATAACGATTAAAACCTCCATAAATTAGTATAATTATCTGATTTCAAAATTTTTACTATATATTTTTTTATTGATTTTAAAAATAAAATTTTAACTACAAGAAAATAAATGCAAATGGATGACTACAGATAAACAACAGAAATGCTCCTCATACAAAAGTAAGTAGAAATCCTTAGAAAAACTCACTTAAAAAAAGAAAGAGAACCTTTTTGCATATTTTTAAAAAAAAAATCTAAAAAGGGGAGTTTTGAACCACTTGACAAACATGGAGTAGCAATTAGATTCAATCCTAACTAATTCTTTAAGCTCATTTTTCCCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTTAAATGAGAAGTCAGCATCCGATTGTGACCTCATACAAAAAGGATATGCAATAATAATAATACTAATAATATATTTTTTTGGTAATTGGGACCTCAATACAGCATGTTCTAATCCCCTTTATGGGTTGTTCACTTGTAAAAAACAGGCTGTTAGATTAGCATACCATGAGAGAATTCATTCACATATTTTCATTTCAAAGCTCAAAAGCTATATGCCAATCTCTCTCCTTTCTTTCTTTCTCTCTCTCTCATGCACATGTGATATGGGGTTTAAGTGATCCAAATGGGATGCCCTGTCCCATCAAGAAGGGGATGGCAATGGCAATGAAGGGGGGCCATGGGGCCTCCTTGGCTTGTGCTACACCAACACAACTAGCAATGAAAGCTTAATTTACTTTACAATGCAACAAATTAGGGCATTTAGGAGAGAGATAAGATGTCCTTATTCACAATCTTAAATGGGGCAACCCCCACCAAGCTAATTTTCAATCAATCCTCCATCACTTTGGTTCTAATCTGTTTAATTCATTTGGACCACTATTATTTAACACCACTTTAATTTTTTTCTCTCTCTTTTTATTTCTTTTGGGACAAAATATTTAGATTATTTTTTTGTGTTATCCATTCAATATGTATGTCATCCATCATCATCACCTACATTTTTATACATTCAATGCTCTCATCTTACCCTTCTATGTTGCATAAGTATTAGCTACCCAATTGTTTGTGTGTAGGGGAATTAGGGAGATTTTGTTTTTGAGTTATTGTTTTAGATTTATAAACTCTTCGAGTGTTCTATATTAGTCCGTCTCTAAACTTTGCATAAAAAAGACTATTTTAATTTTTACTGTTAATTTTGAATTATTAATAATTTAACAAAAAAATTGAATCTATTACAAAATCAAACATTTTGCCTACGACATGCGGCTTCAAATATTTGTCTAAATAAACATCTACTTATCAAGTAAATCAATAAAAGATGCATTTGGGTCAAATTTATGTTAAATAATTTATTAAAAAAAAAAGATAAATACATTTTTAATGTAAATTTTAAAGGCTAAAATAAGATGTTTAAAAATTTTTAAGACTAAAATGAAAACAATATAAAGGTTGAGGATGAATATGAGATTTAAGTCCTTTTTTTTTTTGGATTCTCCTAGTCATTATATTAATATTATTATAGATTTAACTCATTTATATAACATAGTTTACATCTTTTTCATTTCCACGAATGGAAGGAAAAGTACTTTTTTTTGGAGGGAAGGAAAAGTACTTCACTTGGGTAAATAGAAAGATGTTTCTATTATTTTATATTTTAGGGCTCTTTATAAACATCAAATCACTTCTAAGTTATATATAGAAATTTGAGTTTTATTTAAACAGTAAAATATACATATATATGAGTACAAACAATTGAAATAAAAAATCAAAGTCTAGTAATAAACCAATGAAGTTACACGAAAAAAAAATTATACCTTCTATCCTTTCATAAGCCAAGCATAAGGGTTTTTTTTGTAATCTACACTCGAATAATTGGATAACTTAACTTTATGCTCCCATATATTTTATATCAATTAGAATGAGATTATGGGGGCTAAAATGAAAGTAGAAAGAGAGAAAAAAAAATATCTCTACTTCTCGTAAAAGACCGTGAGTTCGAGTCCTCCTATCCTAATTTGTGATATTTAAAAAAAAAAAAAAAGAAAAAGAGGGGGGGGGAGGTGTTAATGGGATTAGCACAGCAAAGGCAAGCTTTTTAATGGGAGAAAAAGAGAAACGAAGGGCAGTGGAAGAAGGGCTTTTTAATGATTTCAACAGAAATGGAGGATTTTGCTTTGGGGGCATGACAGACAGCTGCTGGACATGAGTCGTTTGGTGATTCGGACCCCTTTAGTTCCGGGACAAAATACCGAAGGAAATTATTGAATTGGGAAAAAGCTTTGCTTTATAACTTTGACCCCTCTTCCCTTTCTCTTTCCTCTTTCTCTCTCCTCTCCTCCAGCCTTTCCAAGCTCTTTCTACAGTGCTTTCTTTCTCCTTTACCATTGTCGAGCAGCAGCAAAAGCAAAGCCCCTGATTCCCCCCACGATCCCGTCAAATTAGGTATTCTTTTCGCGCTTTCCTCTTTTGCTCTTCTTGATTTTGCTCTTGATGCGCCTCTAAAGCTTTAG

mRNA sequence

ATGGATCAGCTGACCCAGAATACTTCATTACAACGACTTCAAAATGTGGAGAAGAGAATTGTGACGGTATTGGAGCTAGCAGGAGGAGTCATGGAAGAGCTTGCCAACCCTGCTGGTCCGAGAAAGGAAATTGTCAACAATCATTGCAGTGAGTTCATGAAATTCATCAAGGATATCCAAGTTACATTGCGGGATGAAATTAAAAGTGCATGTGAATACCGTCCATTTGAGAAGTGTGATTATAGTTCAAGGATAACTAATGAACTTTGCTGCAAGAAACTGGATTACATGATTTCAAAGTTGGATGGAATGAAACAGACTATCGATGAATATCAAACAGCTGCTGGACATGAGTCGTTTGGTGATTCGGACCCCTTTAGTTCCGGGACAAAATACCGAAGGAAATTATTGAATTGGGAAAAAGCTTTGCTTTATAACTTTGACCCCTCTTCCCTTTCTCTTTCCTCTTTCTCTCTCCTCTCCTCCAGCCTTTCCAAGCTCTTTCTACAGTGCTTTCTTTCTCCTTTACCATTGTCGAGCAGCAGCAAAAGCAAAGCCCCTGATTCCCCCCACGATCCCGTCAAATTAGGTATTCTTTTCGCGCTTTCCTCTTTTGCTCTTCTTGATTTTGCTCTTGATGCGCCTCTAAAGCTTTAG

Coding sequence (CDS)

ATGGATCAGCTGACCCAGAATACTTCATTACAACGACTTCAAAATGTGGAGAAGAGAATTGTGACGGTATTGGAGCTAGCAGGAGGAGTCATGGAAGAGCTTGCCAACCCTGCTGGTCCGAGAAAGGAAATTGTCAACAATCATTGCAGTGAGTTCATGAAATTCATCAAGGATATCCAAGTTACATTGCGGGATGAAATTAAAAGTGCATGTGAATACCGTCCATTTGAGAAGTGTGATTATAGTTCAAGGATAACTAATGAACTTTGCTGCAAGAAACTGGATTACATGATTTCAAAGTTGGATGGAATGAAACAGACTATCGATGAATATCAAACAGCTGCTGGACATGAGTCGTTTGGTGATTCGGACCCCTTTAGTTCCGGGACAAAATACCGAAGGAAATTATTGAATTGGGAAAAAGCTTTGCTTTATAACTTTGACCCCTCTTCCCTTTCTCTTTCCTCTTTCTCTCTCCTCTCCTCCAGCCTTTCCAAGCTCTTTCTACAGTGCTTTCTTTCTCCTTTACCATTGTCGAGCAGCAGCAAAAGCAAAGCCCCTGATTCCCCCCACGATCCCGTCAAATTAGGTATTCTTTTCGCGCTTTCCTCTTTTGCTCTTCTTGATTTTGCTCTTGATGCGCCTCTAAAGCTTTAG

Protein sequence

MDQLTQNTSLQRLQNVEKRIVTVLELAGGVMEELANPAGPRKEIVNNHCSEFMKFIKDIQVTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLDYMISKLDGMKQTIDEYQTAAGHESFGDSDPFSSGTKYRRKLLNWEKALLYNFDPSSLSLSSFSLLSSSLSKLFLQCFLSPLPLSSSSKSKAPDSPHDPVKLGILFALSSFALLDFALDAPLKL
Homology
[Close]
BLAST of Sgr020892 vs. NCBI nr
Match: XP_022142440.1 (mediator of RNA polymerase II transcription subunit 11 [Momordica charantia] >XP_022142441.1 mediator of RNA polymerase II transcription subunit 11 [Momordica charantia])

HSP 1 Score: 220.3 bits (560), Expect = 1.6e-53
Identity = 107/112 (95.54%), Postives = 109/112 (97.32%), Query Frame = 0 

Query: 1   MDQLTQNTSLQRLQNVEKRIVTVLELAGGVMEELANPAGPRKEIVNNHCSEFMKFIKDIQ 60
           MD LTQNTSLQRLQNVEKRIV VLELAGGVMEELANPAGPRKE VNNHCSEFM+FIKDIQ
Sbjct: 1   MDPLTQNTSLQRLQNVEKRIVRVLELAGGVMEELANPAGPRKEFVNNHCSEFMQFIKDIQ 60

Query: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLDYMISKLDGMKQTIDEYQ 113
           VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKL+YMISKLDGMKQTIDEYQ
Sbjct: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLEYMISKLDGMKQTIDEYQ 112

[Close]
BLAST of Sgr020892 vs. NCBI nr
Match: XP_022927640.1 (mediator of RNA polymerase II transcription subunit 11 isoform X2 [Cucurbita moschata] >XP_022927641.1 mediator of RNA polymerase II transcription subunit 11 isoform X2 [Cucurbita moschata] >KAG6583673.1 Mediator of RNA polymerase II transcription subunit 11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 220.3 bits (560), Expect = 1.6e-53
Identity = 107/112 (95.54%), Postives = 109/112 (97.32%), Query Frame = 0 

Query: 1   MDQLTQNTSLQRLQNVEKRIVTVLELAGGVMEELANPAGPRKEIVNNHCSEFMKFIKDIQ 60
           MD LTQNTSLQRLQNVEKRIV VLELAGGVMEELANPAGPRKE VNNHCSEFM+FIKDIQ
Sbjct: 1   MDPLTQNTSLQRLQNVEKRIVRVLELAGGVMEELANPAGPRKEFVNNHCSEFMQFIKDIQ 60

Query: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLDYMISKLDGMKQTIDEYQ 113
           VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKL+YMISKLDGMKQTIDEYQ
Sbjct: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLEYMISKLDGMKQTIDEYQ 112

[Close]
BLAST of Sgr020892 vs. NCBI nr
Match: XP_023520392.1 (mediator of RNA polymerase II transcription subunit 11 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023520393.1 mediator of RNA polymerase II transcription subunit 11 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 220.3 bits (560), Expect = 1.6e-53
Identity = 107/112 (95.54%), Postives = 109/112 (97.32%), Query Frame = 0 

Query: 1   MDQLTQNTSLQRLQNVEKRIVTVLELAGGVMEELANPAGPRKEIVNNHCSEFMKFIKDIQ 60
           MD LTQNTSLQRLQNVEKRIV VLELAGGVMEELANPAGPRKE VNNHCSEFM+FIKDIQ
Sbjct: 1   MDPLTQNTSLQRLQNVEKRIVRVLELAGGVMEELANPAGPRKEFVNNHCSEFMQFIKDIQ 60

Query: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLDYMISKLDGMKQTIDEYQ 113
           VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKL+YMISKLDGMKQTIDEYQ
Sbjct: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLEYMISKLDGMKQTIDEYQ 112

[Close]
BLAST of Sgr020892 vs. NCBI nr
Match: XP_022973172.1 (mediator of RNA polymerase II transcription subunit 11 isoform X2 [Cucurbita maxima] >XP_022973173.1 mediator of RNA polymerase II transcription subunit 11 isoform X2 [Cucurbita maxima])

HSP 1 Score: 215.7 bits (548), Expect = 4.0e-52
Identity = 105/112 (93.75%), Postives = 107/112 (95.54%), Query Frame = 0 

Query: 1   MDQLTQNTSLQRLQNVEKRIVTVLELAGGVMEELANPAGPRKEIVNNHCSEFMKFIKDIQ 60
           MD LTQNTSLQRLQNVEKRIV VLELAGGVMEELANPAGPRKE VNNHCSEFM+FIKDIQ
Sbjct: 1   MDPLTQNTSLQRLQNVEKRIVRVLELAGGVMEELANPAGPRKEFVNNHCSEFMQFIKDIQ 60

Query: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLDYMISKLDGMKQTIDEYQ 113
           VTLRDEIKSACEYRPFEKCDYSSRI NELCCKKL+YMI KLDGMKQTIDEYQ
Sbjct: 61  VTLRDEIKSACEYRPFEKCDYSSRIINELCCKKLEYMILKLDGMKQTIDEYQ 112

[Close]
BLAST of Sgr020892 vs. NCBI nr
Match: XP_038894867.1 (mediator of RNA polymerase II transcription subunit 11 [Benincasa hispida] >XP_038894868.1 mediator of RNA polymerase II transcription subunit 11 [Benincasa hispida])

HSP 1 Score: 214.9 bits (546), Expect = 6.8e-52
Identity = 105/112 (93.75%), Postives = 107/112 (95.54%), Query Frame = 0 

Query: 1   MDQLTQNTSLQRLQNVEKRIVTVLELAGGVMEELANPAGPRKEIVNNHCSEFMKFIKDIQ 60
           MD  TQNTSLQRLQNVEKRIV VLELAGGVMEELANPAGPRKE VNNHCSEFM+FIKDIQ
Sbjct: 1   MDLPTQNTSLQRLQNVEKRIVRVLELAGGVMEELANPAGPRKEFVNNHCSEFMQFIKDIQ 60

Query: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLDYMISKLDGMKQTIDEYQ 113
           VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKL+YMISKLD MKQTIDEYQ
Sbjct: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLEYMISKLDAMKQTIDEYQ 112

[Close]
BLAST of Sgr020892 vs. ExPASy Swiss-Prot
Match: Q6ID77 (Mediator of RNA polymerase II transcription subunit 11 OS=Arabidopsis thaliana OX=3702 GN=MED11 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 7.8e-43
Identity = 80/114 (70.18%), Postives = 101/114 (88.60%), Query Frame = 0 

Query: 1   MDQLTQNTSLQRLQNVEKRIVTVLELAGGVMEELANPAGPRKEIVNNHCSEFMKFIKDIQ 60
           MD  TQNTSLQRLQNVE R+V VLELAGGVMEELA+P+GP+KE VN+HC EFM+ +KDIQ
Sbjct: 1   MDPQTQNTSLQRLQNVENRVVKVLELAGGVMEELASPSGPKKEFVNSHCREFMQSMKDIQ 60

Query: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLDYMISKLDGMKQTIDEYQTA 115
           VTLR+EIKSACEYRPFEKCDY++RI NE+C +KL+Y++++L+ +KQT D Y ++
Sbjct: 61  VTLREEIKSACEYRPFEKCDYNARIANEICFQKLEYVLTQLEDLKQTADRYPSS 114

[Close]
BLAST of Sgr020892 vs. ExPASy TrEMBL
Match: A0A6J1CKY4 (Mediator of RNA polymerase II transcription subunit 11 OS=Momordica charantia OX=3673 GN=LOC111012572 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 7.8e-54
Identity = 107/112 (95.54%), Postives = 109/112 (97.32%), Query Frame = 0 

Query: 1   MDQLTQNTSLQRLQNVEKRIVTVLELAGGVMEELANPAGPRKEIVNNHCSEFMKFIKDIQ 60
           MD LTQNTSLQRLQNVEKRIV VLELAGGVMEELANPAGPRKE VNNHCSEFM+FIKDIQ
Sbjct: 1   MDPLTQNTSLQRLQNVEKRIVRVLELAGGVMEELANPAGPRKEFVNNHCSEFMQFIKDIQ 60

Query: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLDYMISKLDGMKQTIDEYQ 113
           VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKL+YMISKLDGMKQTIDEYQ
Sbjct: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLEYMISKLDGMKQTIDEYQ 112

[Close]
BLAST of Sgr020892 vs. ExPASy TrEMBL
Match: A0A6J1EPJ1 (Mediator of RNA polymerase II transcription subunit 11 OS=Cucurbita moschata OX=3662 GN=LOC111434405 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 7.8e-54
Identity = 107/112 (95.54%), Postives = 109/112 (97.32%), Query Frame = 0 

Query: 1   MDQLTQNTSLQRLQNVEKRIVTVLELAGGVMEELANPAGPRKEIVNNHCSEFMKFIKDIQ 60
           MD LTQNTSLQRLQNVEKRIV VLELAGGVMEELANPAGPRKE VNNHCSEFM+FIKDIQ
Sbjct: 1   MDPLTQNTSLQRLQNVEKRIVRVLELAGGVMEELANPAGPRKEFVNNHCSEFMQFIKDIQ 60

Query: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLDYMISKLDGMKQTIDEYQ 113
           VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKL+YMISKLDGMKQTIDEYQ
Sbjct: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLEYMISKLDGMKQTIDEYQ 112

[Close]
BLAST of Sgr020892 vs. ExPASy TrEMBL
Match: A0A6J1I6T5 (Mediator of RNA polymerase II transcription subunit 11 OS=Cucurbita maxima OX=3661 GN=LOC111471674 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.9e-52
Identity = 105/112 (93.75%), Postives = 107/112 (95.54%), Query Frame = 0 

Query: 1   MDQLTQNTSLQRLQNVEKRIVTVLELAGGVMEELANPAGPRKEIVNNHCSEFMKFIKDIQ 60
           MD LTQNTSLQRLQNVEKRIV VLELAGGVMEELANPAGPRKE VNNHCSEFM+FIKDIQ
Sbjct: 1   MDPLTQNTSLQRLQNVEKRIVRVLELAGGVMEELANPAGPRKEFVNNHCSEFMQFIKDIQ 60

Query: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLDYMISKLDGMKQTIDEYQ 113
           VTLRDEIKSACEYRPFEKCDYSSRI NELCCKKL+YMI KLDGMKQTIDEYQ
Sbjct: 61  VTLRDEIKSACEYRPFEKCDYSSRIINELCCKKLEYMILKLDGMKQTIDEYQ 112

[Close]
BLAST of Sgr020892 vs. ExPASy TrEMBL
Match: A0A1S3B5G7 (Mediator of RNA polymerase II transcription subunit 11 OS=Cucumis melo OX=3656 GN=LOC103486032 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 4.3e-52
Identity = 104/112 (92.86%), Postives = 107/112 (95.54%), Query Frame = 0 

Query: 1   MDQLTQNTSLQRLQNVEKRIVTVLELAGGVMEELANPAGPRKEIVNNHCSEFMKFIKDIQ 60
           MD   QNTSLQRLQNVEKRIV VLELAGGVMEELANPAGPRKE VNNHCSEFM+FIKDIQ
Sbjct: 1   MDPPAQNTSLQRLQNVEKRIVRVLELAGGVMEELANPAGPRKEFVNNHCSEFMQFIKDIQ 60

Query: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLDYMISKLDGMKQTIDEYQ 113
           VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKL+YMISKLDGMKQTID+YQ
Sbjct: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLEYMISKLDGMKQTIDDYQ 112

[Close]
BLAST of Sgr020892 vs. ExPASy TrEMBL
Match: A0A061GG64 (Mediator of RNA polymerase II transcription subunit 11 OS=Theobroma cacao OX=3641 GN=MED11 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 4.4e-49
Identity = 98/119 (82.35%), Postives = 106/119 (89.08%), Query Frame = 0 

Query: 1   MDQLTQNTSLQRLQNVEKRIVTVLELAGGVMEELANPAGPRKEIVNNHCSEFMKFIKDIQ 60
           MD  TQNTSLQRLQNVEKRIV VLELAGGVM+ELANP GPRKE +NNHC EFMK IKDIQ
Sbjct: 1   MDSPTQNTSLQRLQNVEKRIVRVLELAGGVMDELANPTGPRKEFINNHCREFMKMIKDIQ 60

Query: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLDYMISKLDGMKQTIDEYQTAAGHES 120
           VTLRDEIKSACEYRPFEKCDYSSRI+NE+CCKKL+Y++S+LD MKQTIDEYQ    H S
Sbjct: 61  VTLRDEIKSACEYRPFEKCDYSSRISNEICCKKLEYVLSQLDAMKQTIDEYQGEDVHYS 119

[Close]
BLAST of Sgr020892 vs. TAIR 10
Match: AT3G01435.1 (Expressed protein )

HSP 1 Score: 175.3 bits (443), Expect = 5.5e-44
Identity = 80/114 (70.18%), Postives = 101/114 (88.60%), Query Frame = 0 

Query: 1   MDQLTQNTSLQRLQNVEKRIVTVLELAGGVMEELANPAGPRKEIVNNHCSEFMKFIKDIQ 60
           MD  TQNTSLQRLQNVE R+V VLELAGGVMEELA+P+GP+KE VN+HC EFM+ +KDIQ
Sbjct: 1   MDPQTQNTSLQRLQNVENRVVKVLELAGGVMEELASPSGPKKEFVNSHCREFMQSMKDIQ 60

Query: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLDYMISKLDGMKQTIDEYQTA 115
           VTLR+EIKSACEYRPFEKCDY++RI NE+C +KL+Y++++L+ +KQT D Y ++
Sbjct: 61  VTLREEIKSACEYRPFEKCDYNARIANEICFQKLEYVLTQLEDLKQTADRYPSS 114

The following BLAST results are available for this feature:
BLAST of Sgr020892 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022142440.11.6e-5395.54mediator of RNA polymerase II transcription subunit 11 [Momordica charantia] >XP... [more]
XP_022927640.11.6e-5395.54mediator of RNA polymerase II transcription subunit 11 isoform X2 [Cucurbita mos... [more]
XP_023520392.11.6e-5395.54mediator of RNA polymerase II transcription subunit 11 isoform X2 [Cucurbita pep... [more]
XP_022973172.14.0e-5293.75mediator of RNA polymerase II transcription subunit 11 isoform X2 [Cucurbita max... [more]
XP_038894867.16.8e-5293.75mediator of RNA polymerase II transcription subunit 11 [Benincasa hispida] >XP_0... [more]
BLAST of Sgr020892 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6ID777.8e-4370.18Mediator of RNA polymerase II transcription subunit 11 OS=Arabidopsis thaliana O... [more]
BLAST of Sgr020892 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CKY47.8e-5495.54Mediator of RNA polymerase II transcription subunit 11 OS=Momordica charantia OX... [more]
A0A6J1EPJ17.8e-5495.54Mediator of RNA polymerase II transcription subunit 11 OS=Cucurbita moschata OX=... [more]
A0A6J1I6T51.9e-5293.75Mediator of RNA polymerase II transcription subunit 11 OS=Cucurbita maxima OX=36... [more]
A0A1S3B5G74.3e-5292.86Mediator of RNA polymerase II transcription subunit 11 OS=Cucumis melo OX=3656 G... [more]
A0A061GG644.4e-4982.35Mediator of RNA polymerase II transcription subunit 11 OS=Theobroma cacao OX=364... [more]
BLAST of Sgr020892 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G01435.15.5e-4470.18Expressed protein [more]
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019404Mediator complex, subunit Med11PFAMPF10280Med11coord: 8..108
e-value: 3.0E-13
score: 50.4
IPR019404Mediator complex, subunit Med11PANTHERPTHR22890UNCHARACTERIZEDcoord: 1..114
NoneNo IPR availableGENE3D1.10.287.3490coord: 7..74
e-value: 4.2E-6
score: 29.1
NoneNo IPR availablePANTHERPTHR22890:SF2MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 11coord: 1..114

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr020892.1Sgr020892.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006357 regulation of transcription by RNA polymerase II
cellular_component GO:0016592 mediator complex
cellular_component GO:0016020 membrane
molecular_function GO:0003712 transcription coregulator activity