Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAACTGCATTGTCTTGCGTTGCAGTCAGTTGCCTCAGAAGAAGTTCAAAGGGCTCAGAAAAGCCACTGAGTCGGCTACAACAGTCAATTCTGCAACCGAACACAGTAATGACCTTCTACTCCATGATTTTAGTTCGCCAACCAGAAGCAGCCTCCAAGTTGAGGAGGTTTGCAGTGCTGTTCCATGCCTGAAAGAGCTCGAAAATCTTCTGGTTTCACCGAAGATAACCTACTCGGATAGAACGGGAGCAAGGAAAGTGAAGATTGTGGTAACTAAGGAACAGTTTAAGTTGTTATTGGCAAATGCGAAAAAGTTTCAGTCTCGGCAAAGACTGTTGAGTTTTACAGGCCATCGCAGGGGGTGTCGGAAATGGCAGCCGTCGTTATCTGCAATTTTGGAGGAACAAGATTGCTGA
mRNA sequence
ATGGGAAACTGCATTGTCTTGCGTTGCAGTCAGTTGCCTCAGAAGAAGTTCAAAGGGCTCAGAAAAGCCACTGAGTCGGCTACAACAGTCAATTCTGCAACCGAACACAGTAATGACCTTCTACTCCATGATTTTAGTTCGCCAACCAGAAGCAGCCTCCAAGTTGAGGAGGTTTGCAGTGCTGTTCCATGCCTGAAAGAGCTCGAAAATCTTCTGGTTTCACCGAAGATAACCTACTCGGATAGAACGGGAGCAAGGAAAGTGAAGATTGTGGTAACTAAGGAACAGTTTAAGTTGTTATTGGCAAATGCGAAAAAGTTTCAGTCTCGGCAAAGACTGTTGAGTTTTACAGGCCATCGCAGGGGGTGTCGGAAATGGCAGCCGTCGTTATCTGCAATTTTGGAGGAACAAGATTGCTGA
Coding sequence (CDS)
ATGGGAAACTGCATTGTCTTGCGTTGCAGTCAGTTGCCTCAGAAGAAGTTCAAAGGGCTCAGAAAAGCCACTGAGTCGGCTACAACAGTCAATTCTGCAACCGAACACAGTAATGACCTTCTACTCCATGATTTTAGTTCGCCAACCAGAAGCAGCCTCCAAGTTGAGGAGGTTTGCAGTGCTGTTCCATGCCTGAAAGAGCTCGAAAATCTTCTGGTTTCACCGAAGATAACCTACTCGGATAGAACGGGAGCAAGGAAAGTGAAGATTGTGGTAACTAAGGAACAGTTTAAGTTGTTATTGGCAAATGCGAAAAAGTTTCAGTCTCGGCAAAGACTGTTGAGTTTTACAGGCCATCGCAGGGGGTGTCGGAAATGGCAGCCGTCGTTATCTGCAATTTTGGAGGAACAAGATTGCTGA
Protein sequence
MGNCIVLRCSQLPQKKFKGLRKATESATTVNSATEHSNDLLLHDFSSPTRSSLQVEEVCSAVPCLKELENLLVSPKITYSDRTGARKVKIVVTKEQFKLLLANAKKFQSRQRLLSFTGHRRGCRKWQPSLSAILEEQDC
Homology
BLAST of Sgr020882 vs. NCBI nr
Match:
KGN64995.1 (hypothetical protein Csa_022837 [Cucumis sativus])
HSP 1 Score: 179.5 bits (454), Expect = 2.0e-41
Identity = 97/139 (69.78%), Postives = 111/139 (79.86%), Query Frame = 0
Query: 1 MGNCIVLRCSQLPQKKFKGLRKATESATT-VNSATEHSNDLLLHDFSSPTRSSLQVEEVC 60
MGNCIVL + PQKK +GL+KATE ATT V SATE ND LL DF S T++SLQV EV
Sbjct: 1 MGNCIVLPSVRSPQKKLRGLKKATELATTIVCSATECGNDPLLKDFKSSTKTSLQVCEVR 60
Query: 61 SAVPCLKELENLLVSPKITYSDRTGARKVKIVVTKEQFKLLLANAKKFQSRQRLLSFTGH 120
+ VPCLKELENLL S KI YSD GA+KVKIVVTKEQFKLLL+NAKK Q R RLLS+TG
Sbjct: 61 NVVPCLKELENLLASLKIVYSDEAGAKKVKIVVTKEQFKLLLSNAKKLQYRHRLLSYTGP 120
Query: 121 RRGCRKWQPSLSAILEEQD 139
R+GC+ W+P+LSAI EE+D
Sbjct: 121 RKGCKNWRPTLSAISEEED 139
BLAST of Sgr020882 vs. NCBI nr
Match:
XP_038877793.1 (uncharacterized protein LOC120070018 isoform X1 [Benincasa hispida])
HSP 1 Score: 166.4 bits (420), Expect = 1.8e-37
Identity = 93/133 (69.92%), Postives = 103/133 (77.44%), Query Frame = 0
Query: 6 VLRCSQLPQKKFKGLRKATESATTVNSATEHSNDLLLHDFSSPTRSSLQVEEVCSAVPCL 65
VL QLPQKK + L KAT+ SATE D LL DF+SPTR+ LQV EV + VPCL
Sbjct: 10 VLMPYQLPQKKLRELEKATD------SATECGKDPLLLDFTSPTRTILQVGEVQNIVPCL 69
Query: 66 KELENLLVSPKITYSDRTGARKVKIVVTKEQFKLLLANAKKFQSRQRLLSFTGHRRGCRK 125
KELENLL S KI YSD GARKVKIVVTKEQFKLLLANAKK QSR RLLS+TG R+GCRK
Sbjct: 70 KELENLLASSKIAYSDGAGARKVKIVVTKEQFKLLLANAKKLQSRHRLLSYTGPRKGCRK 129
Query: 126 WQPSLSAILEEQD 139
W+P+LSAI EE+D
Sbjct: 130 WRPTLSAISEEED 136
BLAST of Sgr020882 vs. NCBI nr
Match:
KAG6583721.1 (hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 157.5 bits (397), Expect = 8.2e-35
Identity = 85/112 (75.89%), Postives = 91/112 (81.25%), Query Frame = 0
Query: 1 MGNCIVLRCSQLPQKKFKGLRKATESATTVNSATEHSNDLLLHDFSSPTRSSLQVEEVCS 60
MGNCIVL C + PQKK +G+ KAT+ ATTV+SATE ND LLHDFSS TR+SLQV EV
Sbjct: 1 MGNCIVLPCVRSPQKKLRGIEKATDLATTVDSATECCNDHLLHDFSSSTRTSLQVGEVRD 60
Query: 61 AVPCLKELENLLVSPKITYSDRTGARKVKIVVTKEQFKLLLANAKKFQSRQR 113
VPCLKELE LLVS KI YSD GARKVKIVVTKEQFKLLLANAKK QSR R
Sbjct: 61 VVPCLKELEKLLVSSKIVYSDGAGARKVKIVVTKEQFKLLLANAKKLQSRHR 112
BLAST of Sgr020882 vs. NCBI nr
Match:
KAA0042344.1 (hypothetical protein E6C27_scaffold795G00420 [Cucumis melo var. makuwa] >TYK15468.1 hypothetical protein E5676_scaffold477G00390 [Cucumis melo var. makuwa])
HSP 1 Score: 141.0 bits (354), Expect = 7.9e-30
Identity = 82/121 (67.77%), Postives = 93/121 (76.86%), Query Frame = 0
Query: 1 MGNCIVLRCSQLPQKKFKGLRKATESAT-TVNSATEHSNDLLLHDFSSPTRSSLQVEEVC 60
MGNCIVL + PQKK +GL+KAT AT V SA+E ND LL +S T++SLQV EV
Sbjct: 1 MGNCIVLPSVRSPQKKLQGLKKATGLATPIVYSASECGNDPLLKYCNSSTKTSLQVGEVR 60
Query: 61 SAVPCLKELENLLVSPKITYSDRTGARKVKIVVTKEQFKLLLANAKKFQSRQRLLSFTGH 120
+ VPCLKELENLL S KI YSD GA+KVKIVVT+EQFKLLLANAKK QSR RLLS+TG
Sbjct: 61 NVVPCLKELENLLASSKIVYSDGGGAKKVKIVVTREQFKLLLANAKKLQSRYRLLSYTGP 120
BLAST of Sgr020882 vs. NCBI nr
Match:
XP_023542404.1 (uncharacterized protein LOC111802317 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 124.4 bits (311), Expect = 7.7e-25
Identity = 75/138 (54.35%), Postives = 84/138 (60.87%), Query Frame = 0
Query: 1 MGNCIVLRCSQLPQKKFKGLRKATESATTVNSATEHSNDLLLHDFSSPTRSSLQVEEVCS 60
MGNCI+L C P K + E AT V+SATE ND LL
Sbjct: 136 MGNCIILPCVHSPSKNL-----SPELATVVDSATEQGNDPLL-----------------D 195
Query: 61 AVPCLKELENLLVSPKITYSDRTGARKVKIVVTKEQFKLLLANAKKFQSRQRLLSFTGHR 120
VPCLKELENLLV K YS GAR+VKIVVT+EQFKLLLANAKK QS RLLS+ G
Sbjct: 196 VVPCLKELENLLVYLKTAYSSGGGAREVKIVVTREQFKLLLANAKKMQSAYRLLSYRGPG 251
Query: 121 RGCRKWQPSLSAILEEQD 139
RG RKW+P LS I EE++
Sbjct: 256 RGRRKWRPMLSVISEEEE 251
BLAST of Sgr020882 vs. ExPASy TrEMBL
Match:
A0A0A0LSY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173150 PE=4 SV=1)
HSP 1 Score: 179.5 bits (454), Expect = 9.7e-42
Identity = 97/139 (69.78%), Postives = 111/139 (79.86%), Query Frame = 0
Query: 1 MGNCIVLRCSQLPQKKFKGLRKATESATT-VNSATEHSNDLLLHDFSSPTRSSLQVEEVC 60
MGNCIVL + PQKK +GL+KATE ATT V SATE ND LL DF S T++SLQV EV
Sbjct: 1 MGNCIVLPSVRSPQKKLRGLKKATELATTIVCSATECGNDPLLKDFKSSTKTSLQVCEVR 60
Query: 61 SAVPCLKELENLLVSPKITYSDRTGARKVKIVVTKEQFKLLLANAKKFQSRQRLLSFTGH 120
+ VPCLKELENLL S KI YSD GA+KVKIVVTKEQFKLLL+NAKK Q R RLLS+TG
Sbjct: 61 NVVPCLKELENLLASLKIVYSDEAGAKKVKIVVTKEQFKLLLSNAKKLQYRHRLLSYTGP 120
Query: 121 RRGCRKWQPSLSAILEEQD 139
R+GC+ W+P+LSAI EE+D
Sbjct: 121 RKGCKNWRPTLSAISEEED 139
BLAST of Sgr020882 vs. ExPASy TrEMBL
Match:
A0A5D3CW41 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00390 PE=4 SV=1)
HSP 1 Score: 141.0 bits (354), Expect = 3.8e-30
Identity = 82/121 (67.77%), Postives = 93/121 (76.86%), Query Frame = 0
Query: 1 MGNCIVLRCSQLPQKKFKGLRKATESAT-TVNSATEHSNDLLLHDFSSPTRSSLQVEEVC 60
MGNCIVL + PQKK +GL+KAT AT V SA+E ND LL +S T++SLQV EV
Sbjct: 1 MGNCIVLPSVRSPQKKLQGLKKATGLATPIVYSASECGNDPLLKYCNSSTKTSLQVGEVR 60
Query: 61 SAVPCLKELENLLVSPKITYSDRTGARKVKIVVTKEQFKLLLANAKKFQSRQRLLSFTGH 120
+ VPCLKELENLL S KI YSD GA+KVKIVVT+EQFKLLLANAKK QSR RLLS+TG
Sbjct: 61 NVVPCLKELENLLASSKIVYSDGGGAKKVKIVVTREQFKLLLANAKKLQSRYRLLSYTGP 120
BLAST of Sgr020882 vs. ExPASy TrEMBL
Match:
A0A6J5UND5 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24534 PE=4 SV=1)
HSP 1 Score: 64.7 bits (156), Expect = 3.5e-07
Identity = 52/149 (34.90%), Postives = 76/149 (51.01%), Query Frame = 0
Query: 1 MGNCIVLRCSQLPQKK-----FKGLRKATESATTVNSATE--HSNDLLLHDFSS----PT 60
MGNC+ + C PQ+K FKG + +++T + T + L+H P
Sbjct: 13 MGNCLHVLCHP-PQEKIKVVIFKGGVREFKASTPIKEITSGPYIGYKLVHHIQPYTPLPP 72
Query: 61 RSSLQVEEVCSAVPCLKELENLLVSPKITYSDRTGARKVKIVVTKEQFKLLLANAKKFQS 120
+ L+ EV VP L L LV KI + + +K+KIVVT+EQ +LLL +A KF+S
Sbjct: 73 NTKLEPGEVYHIVPNLASLGKPLVPSKIVHQESCKRQKIKIVVTREQLELLLKSANKFRS 132
Query: 121 RQRL---LSFTGHRRGCRKWQPSLSAILE 136
+ + LS G KW+PSL+ I E
Sbjct: 133 PKEIGVQLSGRSGLEGSPKWRPSLAIIPE 160
BLAST of Sgr020882 vs. ExPASy TrEMBL
Match:
A0A314XUU1 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_29074 PE=4 SV=1)
HSP 1 Score: 63.5 bits (153), Expect = 7.8e-07
Identity = 52/149 (34.90%), Postives = 76/149 (51.01%), Query Frame = 0
Query: 1 MGNCIVLRCSQLPQKK-----FKGLRKATESATTVNSATE--HSNDLLLHDFSS----PT 60
MGNC+ + C PQ+K FKG + +++T + T + L+H P
Sbjct: 1 MGNCLHVLCHP-PQEKIKVVIFKGGVREFKASTPIEEITSGPYIGYKLVHHVQPFTPLPP 60
Query: 61 RSSLQVEEVCSAVPCLKELENLLVSPKITYSDRTGARKVKIVVTKEQFKLLLANAKKFQS 120
+ L+ EV VP L L LV KI + + +K+KIVVT+EQ +LLL +A KF+S
Sbjct: 61 NTKLEPGEVYHLVPNLASLGKPLVPSKIVHQESCKRQKIKIVVTREQLELLLKSANKFRS 120
Query: 121 RQRL---LSFTGHRRGCRKWQPSLSAILE 136
+ + LS G KW+PSL+ I E
Sbjct: 121 PKEIGVQLSGRSGLEGPPKWRPSLAIIPE 148
BLAST of Sgr020882 vs. ExPASy TrEMBL
Match:
A0A2C9VA09 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G078000 PE=4 SV=1)
HSP 1 Score: 63.2 bits (152), Expect = 1.0e-06
Identity = 52/148 (35.14%), Postives = 77/148 (52.03%), Query Frame = 0
Query: 1 MGNCIVLRCSQLPQKK----FKGLRKATESATTVNSAT--EHSNDLLLHD----FSSPTR 60
MGNCI + C Q +K F G K +++TTV T + ++H P
Sbjct: 1 MGNCIDVMCHQPAEKSRVIMFNGEEKEFKASTTVKKITSGRYRGLKIVHHALPLSPLPPN 60
Query: 61 SSLQVEEVCSAVPCLKELENLLVSPKITYSDRTGARKVKIVVTKEQFKLLLANAKKFQSR 120
+ L+ E+ VP L + ++L VS K+ +KVKIV+T++Q LLL NA +F+S+
Sbjct: 61 TRLEPGELYYLVPPLVKPKSLKVSSKLANQATCTKKKVKIVLTRQQLDLLLRNA-EFKSK 120
Query: 121 QRLLSFTG-HRRGCRKWQPSLSAILEEQ 138
+ F+G RKWQPSL+ I E Q
Sbjct: 121 GVAVQFSGSFSEPGRKWQPSLATIQEFQ 147
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KGN64995.1 | 2.0e-41 | 69.78 | hypothetical protein Csa_022837 [Cucumis sativus] | [more] |
XP_038877793.1 | 1.8e-37 | 69.92 | uncharacterized protein LOC120070018 isoform X1 [Benincasa hispida] | [more] |
KAG6583721.1 | 8.2e-35 | 75.89 | hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAA0042344.1 | 7.9e-30 | 67.77 | hypothetical protein E6C27_scaffold795G00420 [Cucumis melo var. makuwa] >TYK1546... | [more] |
XP_023542404.1 | 7.7e-25 | 54.35 | uncharacterized protein LOC111802317 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LSY9 | 9.7e-42 | 69.78 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173150 PE=4 SV=1 | [more] |
A0A5D3CW41 | 3.8e-30 | 67.77 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J5UND5 | 3.5e-07 | 34.90 | Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24534 PE=4 S... | [more] |
A0A314XUU1 | 7.8e-07 | 34.90 | Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_290... | [more] |
A0A2C9VA09 | 1.0e-06 | 35.14 | Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G078000 PE=4 SV=... | [more] |
Match Name | E-value | Identity | Description | |