Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGCCAACCTCTGCAGCCTAAGGCGCTCGTGCATCGGAGGACCAATGACCGCGGCCACCTCCGATGACGGTAAGCCAAAAGTGCTTTTAAATTTTGAAAATGTTAAATTACAAGTTTAGTTCATTCAGAGTTTTAGAATTGTGTCTAATATATTTCTAAATTTTAAAAATATCTAATATATCCTTAAACTTTATGTTGGGAAAATTACAAGTAACAGAAGAAATTTGAGCAAATATTAAAAAGCAATCAAATTGGGGCGCAGGTATCTTGCTTTCTTTAAGGAGATTCAAGCCCTTTGCAGTGTGAATTTCTTTATCAACCACCAGTGCAACAGATCTTTTTTGGCCCTCCCCTCTAGGATACAACAACCCAACTGAAATGTTGTGTAGCTCAAATCACTCTGTACTAAGAGGTTGAGCTCAAAGTTCTACAACAAAGAACACTTGTAGGAGAGATATTTATAGGGACTTTAGATCTAAAAATTTAATAGTCTATTAATTAATTAAAAAAGTTAATAAATACATTTATCTCTTAATTTGATAAAATCTCTCACAATTAATCCTTTTAATTTAATACTAAAAAGAAACTCATATTTAATTATTATTAAATATTAAATTTTAAAAATTATATAATAGCTAAAAGATTTATAGGATAAAAGATTAAAAGTAAAAAAAATTTATTAGACACTTTTTTAATTTAGAGAACTATTAGATATAATTTTAAAAGTTAGAGAAATCATACATGTAATCGTTGCAATTCTTTCACTCTCTAAAGAGAGTTAGGGTTCAATTCTGCTCAGGTTACGCAATATGTGATTTGAGAAGGCTACAATGGTGGAGGAGAGAGAAACGAGAAGTGAAGAGAGAGAAAGAGGAGTCCTGTGAAAATAAGCAGGAAATGAAGAGCGATTATATGTCTCTGGAGGAGTTGATGTTGGCTTCTCCGGTACCATCATCGGAGCAAGGTTTTGTTAATGGCGGACAGTTTAATGTCTCGAGACACGGCGGGTTCAAAAGAAAAGTGCATCCAACGACCATTTCTGATCATTCATCTTCGTTTTGTGAGAGATCGAGTGTGGTTGGTAAATCGGTTGCTGAGAATCATGAGTTCTCTTGTGAAATCGGGAGTTTTTCGATTTGCAGAAGCGAAAGTGGGAAGTTGAAGAAGAAAGTGAGCTTTAGACTGCCGGAGGTGTCGGACGTTATCGTATTTTACTCGCCGGAAGATGATGCGCCGGCCGACGCGAATGTAATTCCTTTGTAA
mRNA sequence
ATGGGAGCCAACCTCTGCAGCCTAAGGCGCTCGTGCATCGGAGGACCAATGACCGCGGCCACCTCCGATGACGGTTACGCAATATGTGATTTGAGAAGGCTACAATGGTGGAGGAGAGAGAAACGAGAAGTGAAGAGAGAGAAAGAGGAGTCCTGTGAAAATAAGCAGGAAATGAAGAGCGATTATATGTCTCTGGAGGAGTTGATGTTGGCTTCTCCGGTACCATCATCGGAGCAAGGTTTTGTTAATGGCGGACAGTTTAATGTCTCGAGACACGGCGGGTTCAAAAGAAAAGTGCATCCAACGACCATTTCTGATCATTCATCTTCGTTTTGTGAGAGATCGAGTGTGGTTGGTAAATCGGTTGCTGAGAATCATGAGTTCTCTTGTGAAATCGGGAGTTTTTCGATTTGCAGAAGCGAAAGTGGGAAGTTGAAGAAGAAAGTGAGCTTTAGACTGCCGGAGGTGTCGGACGTTATCGTATTTTACTCGCCGGAAGATGATGCGCCGGCCGACGCGAATGTAATTCCTTTGTAA
Coding sequence (CDS)
ATGGGAGCCAACCTCTGCAGCCTAAGGCGCTCGTGCATCGGAGGACCAATGACCGCGGCCACCTCCGATGACGGTTACGCAATATGTGATTTGAGAAGGCTACAATGGTGGAGGAGAGAGAAACGAGAAGTGAAGAGAGAGAAAGAGGAGTCCTGTGAAAATAAGCAGGAAATGAAGAGCGATTATATGTCTCTGGAGGAGTTGATGTTGGCTTCTCCGGTACCATCATCGGAGCAAGGTTTTGTTAATGGCGGACAGTTTAATGTCTCGAGACACGGCGGGTTCAAAAGAAAAGTGCATCCAACGACCATTTCTGATCATTCATCTTCGTTTTGTGAGAGATCGAGTGTGGTTGGTAAATCGGTTGCTGAGAATCATGAGTTCTCTTGTGAAATCGGGAGTTTTTCGATTTGCAGAAGCGAAAGTGGGAAGTTGAAGAAGAAAGTGAGCTTTAGACTGCCGGAGGTGTCGGACGTTATCGTATTTTACTCGCCGGAAGATGATGCGCCGGCCGACGCGAATGTAATTCCTTTGTAA
Protein sequence
MGANLCSLRRSCIGGPMTAATSDDGYAICDLRRLQWWRREKREVKREKEESCENKQEMKSDYMSLEELMLASPVPSSEQGFVNGGQFNVSRHGGFKRKVHPTTISDHSSSFCERSSVVGKSVAENHEFSCEIGSFSICRSESGKLKKKVSFRLPEVSDVIVFYSPEDDAPADANVIPL
Homology
BLAST of Sgr020853 vs. NCBI nr
Match:
XP_022142601.1 (uncharacterized protein LOC111012677 [Momordica charantia])
HSP 1 Score: 231.5 bits (589), Expect = 5.7e-57
Identity = 131/177 (74.01%), Postives = 143/177 (80.79%), Query Frame = 0
Query: 1 MGANLCSLRRSCIGGPMTAATSDDGYAICDLRRLQWWRREKREVKREKEESCENKQEMKS 60
MGANLCS R SC+ GP TAA S DG I + RRLQWWRRE+ EVKREKE S E KQE K
Sbjct: 1 MGANLCSFRSSCVRGPTTAAPSGDGRGISEWRRLQWWRREEIEVKREKEASIE-KQETKR 60
Query: 61 DYMSLEELMLASPVPSSEQGFVNGGQFNVSRHGGFKRKVHPTTISDHSSSFCERS-SVVG 120
+Y+SLEEL+LASP PSSEQGF NGG+FNVSRHGGFKRKVHPT I +SSS CERS VG
Sbjct: 61 EYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRIC-NSSSICERSGGAVG 120
Query: 121 KSVAENHEFSCEIGSFSICRSESGKLKKKVSFRLPEVSDVIVFYSPEDDAPA-DANV 176
+SVA+ EFS GSFSICRSESGKLKKKVSFRLPEVS+VIV YSPE+ A A DANV
Sbjct: 121 ESVADQDEFSG--GSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASADDANV 173
BLAST of Sgr020853 vs. NCBI nr
Match:
XP_008458959.1 (PREDICTED: uncharacterized protein LOC103498217 isoform X3 [Cucumis melo])
HSP 1 Score: 186.8 bits (473), Expect = 1.6e-43
Identity = 109/172 (63.37%), Postives = 123/172 (71.51%), Query Frame = 0
Query: 1 MGANLCSLRRSCIGGPMTAATSDDGYAICDLRRLQWWRREKREVKREKEESCENKQEMKS 60
MGANLC++RR P TA S DGY IC RR QWWRRE+ EVKRE E S E K+
Sbjct: 37 MGANLCTIRR-----PATADASGDGYEICGWRRRQWWRRERNEVKRELEASIEKKE--TK 96
Query: 61 DYMSLEELMLASPVPSSEQGFVNGGQFNVSRHGGFKRKVHPTTISDHSSSFCERSSVVGK 120
++MSLEEL+LASP SE+G N G+FNVSRHGGFKRKVHP I + SS ERS VG+
Sbjct: 97 EFMSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGE 156
Query: 121 SVAENHEFSCEIGSFSICRSESGKLKKKVSFRLPEVSDVIVFYSPEDDAPAD 173
SVA++ E+S G F ICR ESGKLKKKVSFRLPEVSDVIV S EDD AD
Sbjct: 157 SVAKD-EYSSHSG-FPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTAD 199
BLAST of Sgr020853 vs. NCBI nr
Match:
TYK12357.1 (uncharacterized protein E5676_scaffold302G001340 [Cucumis melo var. makuwa])
HSP 1 Score: 186.8 bits (473), Expect = 1.6e-43
Identity = 109/172 (63.37%), Postives = 123/172 (71.51%), Query Frame = 0
Query: 1 MGANLCSLRRSCIGGPMTAATSDDGYAICDLRRLQWWRREKREVKREKEESCENKQEMKS 60
MGANLC++RR P TA S DGY IC RR QWWRRE+ EVKRE E S E K+
Sbjct: 1 MGANLCTIRR-----PATADASGDGYEICGWRRRQWWRRERNEVKRELEASIEKKE--TK 60
Query: 61 DYMSLEELMLASPVPSSEQGFVNGGQFNVSRHGGFKRKVHPTTISDHSSSFCERSSVVGK 120
++MSLEEL+LASP SE+G N G+FNVSRHGGFKRKVHP I + SS ERS VG+
Sbjct: 61 EFMSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGE 120
Query: 121 SVAENHEFSCEIGSFSICRSESGKLKKKVSFRLPEVSDVIVFYSPEDDAPAD 173
SVA++ E+S G F ICR ESGKLKKKVSFRLPEVSDVIV S EDD AD
Sbjct: 121 SVAKD-EYSSHSG-FPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTAD 163
BLAST of Sgr020853 vs. NCBI nr
Match:
XP_011655111.1 (uncharacterized protein LOC105435481 [Cucumis sativus] >KAE8652878.1 hypothetical protein Csa_013027 [Cucumis sativus])
HSP 1 Score: 183.7 bits (465), Expect = 1.4e-42
Identity = 109/172 (63.37%), Postives = 123/172 (71.51%), Query Frame = 0
Query: 1 MGANLCSLRRSCIGGPMTAATSDDGYAICDLRRLQWWRREKREVKREKEESCENKQEMKS 60
MGANLC++R C P TA S DGY IC RR WWRRE+ +VKRE E S E K
Sbjct: 1 MGANLCTIR--C---PGTADASGDGYEICGWRRRHWWRRERNDVKRELEASIE-----KK 60
Query: 61 DYMSLEELMLASPVPSSEQGFVNGGQFNVSRHGGFKRKVHPTTISDHSSSFCERSSVVGK 120
++MSLEEL+LASP SE+GF N G+FNVSRHGGFKRKVHP I + SS+ ERS VGK
Sbjct: 61 EFMSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGK 120
Query: 121 SVAENHEFSCEIGSFSICRSESGKLKKKVSFRLPEVSDVIVFYSPEDDAPAD 173
SVAE+ E+S G F IC S+SGKLKKKVSFRLPEVSDVIV S EDD AD
Sbjct: 121 SVAED-EYSSH-GGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIAD 160
BLAST of Sgr020853 vs. NCBI nr
Match:
XP_008458958.1 (PREDICTED: uncharacterized protein LOC103498217 isoform X2 [Cucumis melo])
HSP 1 Score: 180.6 bits (457), Expect = 1.2e-41
Identity = 109/177 (61.58%), Postives = 123/177 (69.49%), Query Frame = 0
Query: 1 MGANLCSLRRSCIGGPMTAATSDD-----GYAICDLRRLQWWRREKREVKREKEESCENK 60
MGANLC++RR P TA S D GY IC RR QWWRRE+ EVKRE E S E K
Sbjct: 37 MGANLCTIRR-----PATADASGDGLGFAGYEICGWRRRQWWRRERNEVKRELEASIEKK 96
Query: 61 QEMKSDYMSLEELMLASPVPSSEQGFVNGGQFNVSRHGGFKRKVHPTTISDHSSSFCERS 120
+ ++MSLEEL+LASP SE+G N G+FNVSRHGGFKRKVHP I + SS ERS
Sbjct: 97 E--TKEFMSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERS 156
Query: 121 SVVGKSVAENHEFSCEIGSFSICRSESGKLKKKVSFRLPEVSDVIVFYSPEDDAPAD 173
VG+SVA++ E+S G F ICR ESGKLKKKVSFRLPEVSDVIV S EDD AD
Sbjct: 157 GFVGESVAKD-EYSSHSG-FPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTAD 204
BLAST of Sgr020853 vs. ExPASy TrEMBL
Match:
A0A6J1CMN8 (uncharacterized protein LOC111012677 OS=Momordica charantia OX=3673 GN=LOC111012677 PE=4 SV=1)
HSP 1 Score: 231.5 bits (589), Expect = 2.8e-57
Identity = 131/177 (74.01%), Postives = 143/177 (80.79%), Query Frame = 0
Query: 1 MGANLCSLRRSCIGGPMTAATSDDGYAICDLRRLQWWRREKREVKREKEESCENKQEMKS 60
MGANLCS R SC+ GP TAA S DG I + RRLQWWRRE+ EVKREKE S E KQE K
Sbjct: 1 MGANLCSFRSSCVRGPTTAAPSGDGRGISEWRRLQWWRREEIEVKREKEASIE-KQETKR 60
Query: 61 DYMSLEELMLASPVPSSEQGFVNGGQFNVSRHGGFKRKVHPTTISDHSSSFCERS-SVVG 120
+Y+SLEEL+LASP PSSEQGF NGG+FNVSRHGGFKRKVHPT I +SSS CERS VG
Sbjct: 61 EYLSLEELLLASPGPSSEQGFGNGGKFNVSRHGGFKRKVHPTRIC-NSSSICERSGGAVG 120
Query: 121 KSVAENHEFSCEIGSFSICRSESGKLKKKVSFRLPEVSDVIVFYSPEDDAPA-DANV 176
+SVA+ EFS GSFSICRSESGKLKKKVSFRLPEVS+VIV YSPE+ A A DANV
Sbjct: 121 ESVADQDEFSG--GSFSICRSESGKLKKKVSFRLPEVSEVIVIYSPEEGASADDANV 173
BLAST of Sgr020853 vs. ExPASy TrEMBL
Match:
A0A5D3CKA0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001340 PE=4 SV=1)
HSP 1 Score: 186.8 bits (473), Expect = 7.8e-44
Identity = 109/172 (63.37%), Postives = 123/172 (71.51%), Query Frame = 0
Query: 1 MGANLCSLRRSCIGGPMTAATSDDGYAICDLRRLQWWRREKREVKREKEESCENKQEMKS 60
MGANLC++RR P TA S DGY IC RR QWWRRE+ EVKRE E S E K+
Sbjct: 1 MGANLCTIRR-----PATADASGDGYEICGWRRRQWWRRERNEVKRELEASIEKKE--TK 60
Query: 61 DYMSLEELMLASPVPSSEQGFVNGGQFNVSRHGGFKRKVHPTTISDHSSSFCERSSVVGK 120
++MSLEEL+LASP SE+G N G+FNVSRHGGFKRKVHP I + SS ERS VG+
Sbjct: 61 EFMSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGE 120
Query: 121 SVAENHEFSCEIGSFSICRSESGKLKKKVSFRLPEVSDVIVFYSPEDDAPAD 173
SVA++ E+S G F ICR ESGKLKKKVSFRLPEVSDVIV S EDD AD
Sbjct: 121 SVAKD-EYSSHSG-FPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTAD 163
BLAST of Sgr020853 vs. ExPASy TrEMBL
Match:
A0A1S3CAA9 (uncharacterized protein LOC103498217 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498217 PE=4 SV=1)
HSP 1 Score: 186.8 bits (473), Expect = 7.8e-44
Identity = 109/172 (63.37%), Postives = 123/172 (71.51%), Query Frame = 0
Query: 1 MGANLCSLRRSCIGGPMTAATSDDGYAICDLRRLQWWRREKREVKREKEESCENKQEMKS 60
MGANLC++RR P TA S DGY IC RR QWWRRE+ EVKRE E S E K+
Sbjct: 37 MGANLCTIRR-----PATADASGDGYEICGWRRRQWWRRERNEVKRELEASIEKKE--TK 96
Query: 61 DYMSLEELMLASPVPSSEQGFVNGGQFNVSRHGGFKRKVHPTTISDHSSSFCERSSVVGK 120
++MSLEEL+LASP SE+G N G+FNVSRHGGFKRKVHP I + SS ERS VG+
Sbjct: 97 EFMSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGE 156
Query: 121 SVAENHEFSCEIGSFSICRSESGKLKKKVSFRLPEVSDVIVFYSPEDDAPAD 173
SVA++ E+S G F ICR ESGKLKKKVSFRLPEVSDVIV S EDD AD
Sbjct: 157 SVAKD-EYSSHSG-FPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTAD 199
BLAST of Sgr020853 vs. ExPASy TrEMBL
Match:
A0A1S3C9M5 (uncharacterized protein LOC103498217 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498217 PE=4 SV=1)
HSP 1 Score: 180.6 bits (457), Expect = 5.6e-42
Identity = 109/177 (61.58%), Postives = 123/177 (69.49%), Query Frame = 0
Query: 1 MGANLCSLRRSCIGGPMTAATSDD-----GYAICDLRRLQWWRREKREVKREKEESCENK 60
MGANLC++RR P TA S D GY IC RR QWWRRE+ EVKRE E S E K
Sbjct: 37 MGANLCTIRR-----PATADASGDGLGFAGYEICGWRRRQWWRRERNEVKRELEASIEKK 96
Query: 61 QEMKSDYMSLEELMLASPVPSSEQGFVNGGQFNVSRHGGFKRKVHPTTISDHSSSFCERS 120
+ ++MSLEEL+LASP SE+G N G+FNVSRHGGFKRKVHP I + SS ERS
Sbjct: 97 E--TKEFMSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERS 156
Query: 121 SVVGKSVAENHEFSCEIGSFSICRSESGKLKKKVSFRLPEVSDVIVFYSPEDDAPAD 173
VG+SVA++ E+S G F ICR ESGKLKKKVSFRLPEVSDVIV S EDD AD
Sbjct: 157 GFVGESVAKD-EYSSHSG-FPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTAD 204
BLAST of Sgr020853 vs. ExPASy TrEMBL
Match:
A0A5A7ULA6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G00430 PE=4 SV=1)
HSP 1 Score: 179.5 bits (454), Expect = 1.2e-41
Identity = 109/180 (60.56%), Postives = 123/180 (68.33%), Query Frame = 0
Query: 1 MGANLCSLRRSCIGGPMTAATSDD--------GYAICDLRRLQWWRREKREVKREKEESC 60
MGANLC++RR P TA S D GY IC RR QWWRRE+ EVKRE E S
Sbjct: 1 MGANLCTIRR-----PATADASGDGKLGLGFAGYEICGWRRRQWWRRERNEVKRELEASI 60
Query: 61 ENKQEMKSDYMSLEELMLASPVPSSEQGFVNGGQFNVSRHGGFKRKVHPTTISDHSSSFC 120
E K+ ++MSLEEL+LASP SE+G N G+FNVSRHGGFKRKVHP I + SS
Sbjct: 61 EKKE--TKEFMSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCD 120
Query: 121 ERSSVVGKSVAENHEFSCEIGSFSICRSESGKLKKKVSFRLPEVSDVIVFYSPEDDAPAD 173
ERS VG+SVA++ E+S G F ICR ESGKLKKKVSFRLPEVSDVIV S EDD AD
Sbjct: 121 ERSGFVGESVAKD-EYSSHSG-FPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTAD 171
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022142601.1 | 5.7e-57 | 74.01 | uncharacterized protein LOC111012677 [Momordica charantia] | [more] |
XP_008458959.1 | 1.6e-43 | 63.37 | PREDICTED: uncharacterized protein LOC103498217 isoform X3 [Cucumis melo] | [more] |
TYK12357.1 | 1.6e-43 | 63.37 | uncharacterized protein E5676_scaffold302G001340 [Cucumis melo var. makuwa] | [more] |
XP_011655111.1 | 1.4e-42 | 63.37 | uncharacterized protein LOC105435481 [Cucumis sativus] >KAE8652878.1 hypothetica... | [more] |
XP_008458958.1 | 1.2e-41 | 61.58 | PREDICTED: uncharacterized protein LOC103498217 isoform X2 [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CMN8 | 2.8e-57 | 74.01 | uncharacterized protein LOC111012677 OS=Momordica charantia OX=3673 GN=LOC111012... | [more] |
A0A5D3CKA0 | 7.8e-44 | 63.37 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3CAA9 | 7.8e-44 | 63.37 | uncharacterized protein LOC103498217 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A1S3C9M5 | 5.6e-42 | 61.58 | uncharacterized protein LOC103498217 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A5A7ULA6 | 1.2e-41 | 60.56 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |