Sgr020850 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr020850
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Nuclear transcription factor Y subunit gamma
Location	tig00153574: 612088 .. 612659 (+)
RNA-Seq Expression	Sgr020850
Synteny	Sgr020850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGATTGCTGTGTTAGAGGAACAGAAAATCGAGGCTGCAGAAAATGAAGCTACTGACAAAGTTGAAGATGAAGCCAACAAATCAAATGAAGTTGAACCAGGTAGTGCAGTGGCAAGTACCAAGGGCGAGCTTCTAGACGAGAAACCAGATATTAACGATGTGCCAATGGAAGAAAGTCAGGTAAATTGTTTTTGCAGCGTTCTCAAGATTTTTCTCTCCCCATTATGCTTGTTCGGTTATTTTAAACCTACCTTTAAAAATAGTAGTTGCACAAAATGCTCCATATGCTCAATATAAACTGATGAGCTATAGAACACTCCAATTATTTAGCAGTAATGCCATTAACATTGTAACCTGCAACCTTTGACAATTAAGCTTCATCTTTCTCTAATGTTACATATGTATACTGGTCGGCTATTTTTCATCGGTCTCAGGACAACGATCATGCAGTGAGACAAGATTTGAACGAAAGTACTTTGGATTTAAGTCTGAACTTGAATGCTCTCAACGATGATGGTGAAACCGGTTCAAAAGCTGATCACATTAGAGATGGCAAGAGGAAGGGCTAA

mRNA sequence

ATGCAGATTGCTGTGTTAGAGGAACAGAAAATCGAGGCTGCAGAAAATGAAGCTACTGACAAAGTTGAAGATGAAGCCAACAAATCAAATGAAGTTGAACCAGGTAGTGCAGTGGCAAGTACCAAGGGCGAGCTTCTAGACGAGAAACCAGATATTAACGATGTGCCAATGGAAGAAAGTCAGGACAACGATCATGCAGTGAGACAAGATTTGAACGAAAGTACTTTGGATTTAAGTCTGAACTTGAATGCTCTCAACGATGATGGTGAAACCGGTTCAAAAGCTGATCACATTAGAGATGGCAAGAGGAAGGGCTAA

Coding sequence (CDS)

ATGCAGATTGCTGTGTTAGAGGAACAGAAAATCGAGGCTGCAGAAAATGAAGCTACTGACAAAGTTGAAGATGAAGCCAACAAATCAAATGAAGTTGAACCAGGTAGTGCAGTGGCAAGTACCAAGGGCGAGCTTCTAGACGAGAAACCAGATATTAACGATGTGCCAATGGAAGAAAGTCAGGACAACGATCATGCAGTGAGACAAGATTTGAACGAAAGTACTTTGGATTTAAGTCTGAACTTGAATGCTCTCAACGATGATGGTGAAACCGGTTCAAAAGCTGATCACATTAGAGATGGCAAGAGGAAGGGCTAA

Protein sequence

MQIAVLEEQKIEAAENEATDKVEDEANKSNEVEPGSAVASTKGELLDEKPDINDVPMEESQDNDHAVRQDLNESTLDLSLNLNALNDDGETGSKADHIRDGKRKG

Homology

[Close]

BLAST of Sgr020850 vs. NCBI nr
Match: XP_023521102.1 (uncharacterized protein LOC111784726 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 172.9 bits (437), Expect = 1.4e-39
Identity = 94/103 (91.26%), Postives = 96/103 (93.20%), Query Frame = 0


Query: 3   IAVLEEQKIEAAENEATDKVEDEANKSNEVEPGSAVASTKGELLDEKPDINDVPMEESQD 62
           IAVLEEQK EAAENEA DKVE EANKSN+VEPGSAVAS KGEL DEKPDINDVPM+ESQD
Sbjct: 116 IAVLEEQKNEAAENEAADKVEYEANKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQD 175

Query: 63  NDHAVRQDLNESTLDLSLNLNALNDDGETGSKADHIRDGKRKG 106
           NDH VRQDLNESTLDLSLNLNALNDDGE GSKADHIRDGKRKG
Sbjct: 176 NDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG 218

[Close]

BLAST of Sgr020850 vs. NCBI nr
Match: KAG6573498.1 (hypothetical protein SDJN03_27385, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 171.4 bits (433), Expect = 4.1e-39
Identity = 93/103 (90.29%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 3   IAVLEEQKIEAAENEATDKVEDEANKSNEVEPGSAVASTKGELLDEKPDINDVPMEESQD 62
           IAVLEEQK EAAENE  DKVE EANKSN+VEPGSAVAS KGEL DEKPDINDVPM+ESQD
Sbjct: 116 IAVLEEQKNEAAENETADKVEYEANKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQD 175

Query: 63  NDHAVRQDLNESTLDLSLNLNALNDDGETGSKADHIRDGKRKG 106
           NDH VRQDLNESTLDLSLNLNALNDDGE GSKADHIRDGKRKG
Sbjct: 176 NDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG 218

[Close]

BLAST of Sgr020850 vs. NCBI nr
Match: XP_022925360.1 (uncharacterized protein LOC111432647 [Cucurbita moschata])

HSP 1 Score: 171.4 bits (433), Expect = 4.1e-39
Identity = 93/103 (90.29%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 3   IAVLEEQKIEAAENEATDKVEDEANKSNEVEPGSAVASTKGELLDEKPDINDVPMEESQD 62
           IAVLEEQK EAAENE  DKVE EANKSN+VEPGSAVAS KGEL DEKPDINDVPM+ESQD
Sbjct: 116 IAVLEEQKNEAAENETADKVEYEANKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQD 175

Query: 63  NDHAVRQDLNESTLDLSLNLNALNDDGETGSKADHIRDGKRKG 106
           NDH VRQDLNESTLDLSLNLNALNDDGE GSKADHIRDGKRKG
Sbjct: 176 NDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG 218

[Close]

BLAST of Sgr020850 vs. NCBI nr
Match: XP_022994887.1 (uncharacterized protein LOC111490478 [Cucurbita maxima])

HSP 1 Score: 167.9 bits (424), Expect = 4.6e-38
Identity = 91/102 (89.22%), Postives = 95/102 (93.14%), Query Frame = 0


Query: 3   IAVLEEQKIEAAENEATDKVEDEANKSNEVEPGSAVASTKGELLDEKPDINDVPMEESQD 62
           IAVLEEQK EAAENEA DKVE EANKSN+VEPGSAVAS KG+L DEKP+INDVPM+ESQD
Sbjct: 116 IAVLEEQKNEAAENEAADKVEYEANKSNDVEPGSAVASAKGDLQDEKPNINDVPMDESQD 175

Query: 63  NDHAVRQDLNESTLDLSLNLNALNDDGETGSKADHIRDGKRK 105
           NDH VRQDLNESTLDLSLNLNALNDDGE GSKADHIRDGKRK
Sbjct: 176 NDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRK 217

[Close]

BLAST of Sgr020850 vs. NCBI nr
Match: XP_022142680.1 (uncharacterized protein LOC111012736 [Momordica charantia])

HSP 1 Score: 167.9 bits (424), Expect = 4.6e-38
Identity = 93/105 (88.57%), Postives = 98/105 (93.33%), Query Frame = 0


Query: 1   MQIAVLEEQKIEAAENEATDKVEDEANKSNEVEPGSAVASTKGELLDEKPDINDVPMEES 60
           M IAVLEEQK EAAENEA+DKVEDEANKS +VEP   +A+ KGELLDEKPDINDVPMEES
Sbjct: 109 MPIAVLEEQKNEAAENEASDKVEDEANKSYDVEP---MANAKGELLDEKPDINDVPMEES 168

Query: 61  QDNDHAVRQDLNESTLDLSLNLNALNDDGETGSKADHIRDGKRKG 106
           QDNDHAVRQDLNESTLDLSLNLNALNDDGETGSKADHIRDGKR+G
Sbjct: 169 QDNDHAVRQDLNESTLDLSLNLNALNDDGETGSKADHIRDGKRRG 210

[Close]

BLAST of Sgr020850 vs. ExPASy TrEMBL
Match: A0A6J1EHR2 (uncharacterized protein LOC111432647 OS=Cucurbita moschata OX=3662 GN=LOC111432647 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.0e-39
Identity = 93/103 (90.29%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 3   IAVLEEQKIEAAENEATDKVEDEANKSNEVEPGSAVASTKGELLDEKPDINDVPMEESQD 62
           IAVLEEQK EAAENE  DKVE EANKSN+VEPGSAVAS KGEL DEKPDINDVPM+ESQD
Sbjct: 116 IAVLEEQKNEAAENETADKVEYEANKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQD 175

Query: 63  NDHAVRQDLNESTLDLSLNLNALNDDGETGSKADHIRDGKRKG 106
           NDH VRQDLNESTLDLSLNLNALNDDGE GSKADHIRDGKRKG
Sbjct: 176 NDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG 218

[Close]

BLAST of Sgr020850 vs. ExPASy TrEMBL
Match: A0A6J1JX59 (uncharacterized protein LOC111490478 OS=Cucurbita maxima OX=3661 GN=LOC111490478 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.2e-38
Identity = 91/102 (89.22%), Postives = 95/102 (93.14%), Query Frame = 0


Query: 3   IAVLEEQKIEAAENEATDKVEDEANKSNEVEPGSAVASTKGELLDEKPDINDVPMEESQD 62
           IAVLEEQK EAAENEA DKVE EANKSN+VEPGSAVAS KG+L DEKP+INDVPM+ESQD
Sbjct: 116 IAVLEEQKNEAAENEAADKVEYEANKSNDVEPGSAVASAKGDLQDEKPNINDVPMDESQD 175

Query: 63  NDHAVRQDLNESTLDLSLNLNALNDDGETGSKADHIRDGKRK 105
           NDH VRQDLNESTLDLSLNLNALNDDGE GSKADHIRDGKRK
Sbjct: 176 NDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRK 217

[Close]

BLAST of Sgr020850 vs. ExPASy TrEMBL
Match: A0A6J1CLM1 (uncharacterized protein LOC111012736 OS=Momordica charantia OX=3673 GN=LOC111012736 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.2e-38
Identity = 93/105 (88.57%), Postives = 98/105 (93.33%), Query Frame = 0


Query: 1   MQIAVLEEQKIEAAENEATDKVEDEANKSNEVEPGSAVASTKGELLDEKPDINDVPMEES 60
           M IAVLEEQK EAAENEA+DKVEDEANKS +VEP   +A+ KGELLDEKPDINDVPMEES
Sbjct: 109 MPIAVLEEQKNEAAENEASDKVEDEANKSYDVEP---MANAKGELLDEKPDINDVPMEES 168

Query: 61  QDNDHAVRQDLNESTLDLSLNLNALNDDGETGSKADHIRDGKRKG 106
           QDNDHAVRQDLNESTLDLSLNLNALNDDGETGSKADHIRDGKR+G
Sbjct: 169 QDNDHAVRQDLNESTLDLSLNLNALNDDGETGSKADHIRDGKRRG 210

[Close]

BLAST of Sgr020850 vs. ExPASy TrEMBL
Match: A0A5A7UEU0 (Nuclear transcription factor Y subunit gamma OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G00310 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.3e-35
Identity = 90/105 (85.71%), Postives = 93/105 (88.57%), Query Frame = 0


Query: 1   MQIAVLEEQKIEAAENEATDKVEDEANKSNEVEPGSAVASTKGELLDEKPDINDVPMEES 60
           + IAVLEEQK EAAENEA D VEDEA KSN+VEP S VA TKGEL DEKPDINDVPMEES
Sbjct: 2   IDIAVLEEQKNEAAENEAADDVEDEAIKSNDVEPSSTVA-TKGELQDEKPDINDVPMEES 61

Query: 61  QDNDHAVRQDLNESTLDLSLNLNALNDDGETGSKADHIRDGKRKG 106
           QDNDH VRQDLNESTLDLSLNLNAL+D GET SKADHIRDGKRKG
Sbjct: 62  QDNDHPVRQDLNESTLDLSLNLNALDDGGETSSKADHIRDGKRKG 105

[Close]

BLAST of Sgr020850 vs. ExPASy TrEMBL
Match: A0A5D3CMI7 (Putative serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001230 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.8e-35
Identity = 90/103 (87.38%), Postives = 92/103 (89.32%), Query Frame = 0


Query: 3   IAVLEEQKIEAAENEATDKVEDEANKSNEVEPGSAVASTKGELLDEKPDINDVPMEESQD 62
           IAVLEEQK EAAENEA D VEDEA KSN+VEP S VA TKGEL DEKPDINDVPMEESQD
Sbjct: 116 IAVLEEQKNEAAENEAADDVEDEAIKSNDVEPSSTVA-TKGELQDEKPDINDVPMEESQD 175

Query: 63  NDHAVRQDLNESTLDLSLNLNALNDDGETGSKADHIRDGKRKG 106
           NDH VRQDLNESTLDLSLNLNAL+D GET SKADHIRDGKRKG
Sbjct: 176 NDHPVRQDLNESTLDLSLNLNALDDGGETSSKADHIRDGKRKG 217

[Close]

BLAST of Sgr020850 vs. TAIR 10
Match: AT4G22320.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1). )

HSP 1 Score: 69.7 bits (169), Expect = 1.6e-12
Identity = 54/114 (47.37%), Postives = 67/114 (58.77%), Query Frame = 0


Query: 3   IAVLEEQKIEAAENEATDKVE--DEANKSNEVEPGSAV---------ASTKGEL-LDEKP 62
           IAVLEEQK E  E E  DK+E  D+ ++ N+VE    V         +  K E+ ++EKP
Sbjct: 119 IAVLEEQKKEITEIEEDDKIEEDDKIDEDNKVEQEDKVDEDKTVEESSEKKAEVEVEEKP 178

Query: 63  DINDVPMEESQ--------DNDHAVRQDLNESTLDLSLNLNALNDDGETGSKAD 97
           DINDVPME+ Q        D +  VRQDLNEST+DL LNLNA + D E   K D
Sbjct: 179 DINDVPMEDIQVEEKIVQDDEEKVVRQDLNESTVDLGLNLNANDADAENDPKED 232

[Close]

BLAST of Sgr020850 vs. TAIR 10
Match: AT4G22320.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1); Has 8953 Blast hits to 5363 proteins in 542 species: Archae - 33; Bacteria - 806; Metazoa - 2454; Fungi - 831; Plants - 279; Viruses - 151; Other Eukaryotes - 4399 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 2.1e-12
Identity = 54/115 (46.96%), Postives = 67/115 (58.26%), Query Frame = 0


Query: 3   IAVLEEQKIEAAENEATDKVE--DEANKSNEVEPGSAV---------ASTKGEL-LDEKP 62
           IAVLEEQK E  E E  DK+E  D+ ++ N+VE    V         +  K E+ ++EKP
Sbjct: 119 IAVLEEQKKEITEIEEDDKIEEDDKIDEDNKVEQEDKVDEDKTVEESSEKKAEVEVEEKP 178

Query: 63  DINDVPMEESQ---------DNDHAVRQDLNESTLDLSLNLNALNDDGETGSKAD 97
           DINDVPME+ Q         D +  VRQDLNEST+DL LNLNA + D E   K D
Sbjct: 179 DINDVPMEDIQQVEEKIVQDDEEKVVRQDLNESTVDLGLNLNANDADAENDPKED 233

The following BLAST results are available for this feature:

BLAST of Sgr020850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521102.1	1.4e-39	91.26	uncharacterized protein LOC111784726 [Cucurbita pepo subsp. pepo]	[more]
KAG6573498.1	4.1e-39	90.29	hypothetical protein SDJN03_27385, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022925360.1	4.1e-39	90.29	uncharacterized protein LOC111432647 [Cucurbita moschata]	[more]
XP_022994887.1	4.6e-38	89.22	uncharacterized protein LOC111490478 [Cucurbita maxima]	[more]
XP_022142680.1	4.6e-38	88.57	uncharacterized protein LOC111012736 [Momordica charantia]	[more]

BLAST of Sgr020850 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr020850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EHR2	2.0e-39	90.29	uncharacterized protein LOC111432647 OS=Cucurbita moschata OX=3662 GN=LOC1114326...	[more]
A0A6J1JX59	2.2e-38	89.22	uncharacterized protein LOC111490478 OS=Cucurbita maxima OX=3661 GN=LOC111490478...	[more]
A0A6J1CLM1	2.2e-38	88.57	uncharacterized protein LOC111012736 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A5A7UEU0	1.3e-35	85.71	Nuclear transcription factor Y subunit gamma OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A5D3CMI7	1.8e-35	87.38	Putative serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Sgr020850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G22320.2	1.6e-12	47.37	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G22320.1	2.1e-12	46.96	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..30
None	No IPR available	PANTHER	PTHR34572:SF1	GOLGIN FAMILY A PROTEIN	coord: 2..97
None	No IPR available	PANTHER	PTHR34572	GOLGIN FAMILY A PROTEIN	coord: 2..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr020850.1	Sgr020850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity