Sgr020733 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr020733
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionGuanine nucleotide exchange factor DBS
Locationtig00153554: 610645 .. 612442 (+)
RNA-Seq ExpressionSgr020733
SyntenySgr020733
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTCTGGTTCTGGGTAGGCAAAACATATATCAGAAGACAGTAGCATTACCTCGGATTAATGTCAAAAAGAAGACCACCCTAGAAATAAAAGAGTGCCAGAGAAGTAGAGCTACAAAGCAAAAACTAGAACAGAGAAAATGTCAGCAATCTTCAGGAGATAAAAACCCAGTAAAAACAAATGCCAGTACCGTGTCTCCACAAATAAACAGTCAATCGTATCGCACAACTACTACAGGTTCATTTCATGAATCAGGAGCTGTATGAACACAACCAACTCACGACACGAGGTTGTCGGTCAGTGACAGAGAAGCTAGCTGATCAGCTGCATTGCCAGCTTGCTGAGCTGCTGCCACATTCCTCAAAACCTCCATAGCCTCAGCTACTTTGGCCTTCAAAGCTTCTGGCGACTCTAGTAGATGCAAAACCTCGGTCTGGTCCATCTCCAGGAGCATTCCAGTTACCTTGGCGGCGTTCTCACGCTCCAACTGTTCCACAAGCGGGTAAAGATTCTCCCCAGCATCTACATTCATTCATGAGCAATGCAAGACTTTCAGTAACCACAAACTACAGTAGAAACGATCTCTAGATGGCTAGATATACTTTGGAAGAAGAAAATTGATGATCTATTTTCCATGTTTCAACATGCTTTTACAAGAAAACGAATTCAATGTTTCTCATTCAAATTTCAAACTATAATAATTTCTCTAATTTTTTTAGTTATACTCATGTTCAAAATTCGAAAGAGAAGTATTATAGTGCAAGATCTGACACTCAAAAGTGTCAAACTTTCATCAAGGTGTGCTTGTCCATGTCAAACTTGGACACATAGCCCTAACTTTCATCAAGGTGTCCTGTACATGCTTTTGTAGAAAGGAAGCCTCACGACATCCATCCAAACCAAAACCCTGTGCATTATTATAACAATCGTACGTATATAATATAGAAATGCTTACTGTTCTCTGCTGGTCTGGGCTAGCATTTGCTAGAGCAGAAGCCAAAGCACCTATTGGGATTGGTTGAGAGAGTGCTGCATCACGCAATGGCATACCACCCATGTCATATGGAACAGAAAACATGCCTCCAGCAACACCAGGCATAGGAACATCAGGCAAACCTCTTCCTGGAGGATAACGATAGACACGCCCTCTAGGCAACATCTATCGTCCAATGAACCCACCAAAAAAGACATTAAATAACTTGAGGAAGCCAACACAGGGAGAAAAGAATGATAGAAAAAAATCACCAACCTGTTGTTGCATCATTGGAACAGGCTGCTGAGTTTGCTGGACAGCTCCTGCACGTCTGCCACCAGGACGCTGGCCTTGCTGACCCTGCTGAACCATTGGTACAAAAAAATTTGGCATTGGACCTCCACCGGGCCTCATACCAGGAACAAGCTGCTGCTGATAACCAAAGCCACCCTGACAAAAATAATACCCATAAGACAAACAGAATAATAATTTAGATGTGGCTCTCGCAATCATATGCACACCACGCCTTTGGAAGTGAAGATTTGATAGACTCAAGGATCCACATGTAAATAAGAACTTCAATTCAATTTTATCACTGCTAGAGCTAAAGGTAGATAACATGATGTTCAGACTAAAAAAAGGATCTGGTAAAGTAGTTACTTGGGAAGGAATGATTGTAGGAGGAGCTTGACCATAAAACAATTGCTGTCCAAGACCTGGACCACCAGGAGGATACATTGGCATTCGTGGGGCAACCGAAGCAGCCATGGCGACTGGCCGTATTTGAGAGAACTGAGCCTATACAACATAGTCAAAGCCATTGA

mRNA sequence

ATGTGTCTGGTTCTGGGTAGGCAAAACATATATCAGAAGACAGTAGCATTACCTCGGATTAATGTCAAAAAGAAGACCACCCTAGAAATAAAAGAGTGCCAGAGAAGTAGAGCTACAAAGCAAAAACTAGAACAGAGAAAATGTCAGCAATCTTCAGGAGATAAAAACCCAGTAAAAACAAATGCCAGTACCGTGTCTCCACAAATAAACAGTCAATCGTATCGCACAACTACTACAGCTGCTGCCACATTCCTCAAAACCTCCATAGCCTCAGCTACTTTGGCCTTCAAAGCTTCTGGCGACTCTAGTAGATGCAAAACCTCGGTCTGGTCCATCTCCAGGAGCATTCCAGTTACCTTGGCGGCGTTCTCACGCTCCAACTGTTCCACAAGCGGTTATACTCATGTTCAAAATTCGAAAGAGAAGTATTATAGTGCAAGATCTGACACTCAAAAGTGTCAAACTTTCATCAAGGCTGCTGAGTTTGCTGGACAGCTCCTGCACGTCTGCCACCAGGACGCTGGCCTTGCTGACCCTGCTGAACCATTGGAGGAGCTTGACCATAAAACAATTGCTGTCCAAGACCTGGACCACCAGGAGGATACATTGGCATTCGTGGGGCAACCGAAGCAGCCATGGCGACTGGCCGTATTTGAGAGAACTGAGCCTATACAACATAGTCAAAGCCATTGA

Coding sequence (CDS)

ATGTGTCTGGTTCTGGGTAGGCAAAACATATATCAGAAGACAGTAGCATTACCTCGGATTAATGTCAAAAAGAAGACCACCCTAGAAATAAAAGAGTGCCAGAGAAGTAGAGCTACAAAGCAAAAACTAGAACAGAGAAAATGTCAGCAATCTTCAGGAGATAAAAACCCAGTAAAAACAAATGCCAGTACCGTGTCTCCACAAATAAACAGTCAATCGTATCGCACAACTACTACAGCTGCTGCCACATTCCTCAAAACCTCCATAGCCTCAGCTACTTTGGCCTTCAAAGCTTCTGGCGACTCTAGTAGATGCAAAACCTCGGTCTGGTCCATCTCCAGGAGCATTCCAGTTACCTTGGCGGCGTTCTCACGCTCCAACTGTTCCACAAGCGGTTATACTCATGTTCAAAATTCGAAAGAGAAGTATTATAGTGCAAGATCTGACACTCAAAAGTGTCAAACTTTCATCAAGGCTGCTGAGTTTGCTGGACAGCTCCTGCACGTCTGCCACCAGGACGCTGGCCTTGCTGACCCTGCTGAACCATTGGAGGAGCTTGACCATAAAACAATTGCTGTCCAAGACCTGGACCACCAGGAGGATACATTGGCATTCGTGGGGCAACCGAAGCAGCCATGGCGACTGGCCGTATTTGAGAGAACTGAGCCTATACAACATAGTCAAAGCCATTGA

Protein sequence

MCLVLGRQNIYQKTVALPRINVKKKTTLEIKECQRSRATKQKLEQRKCQQSSGDKNPVKTNASTVSPQINSQSYRTTTTAAATFLKTSIASATLAFKASGDSSRCKTSVWSISRSIPVTLAAFSRSNCSTSGYTHVQNSKEKYYSARSDTQKCQTFIKAAEFAGQLLHVCHQDAGLADPAEPLEELDHKTIAVQDLDHQEDTLAFVGQPKQPWRLAVFERTEPIQHSQSH
Homology
[Close]
BLAST of Sgr020733 vs. NCBI nr
Match: CAA2964422.1 (Hypothetical predicted protein [Olea europaea subsp. europaea])

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-07
Identity = 37/49 (75.51%), Postives = 41/49 (83.67%), Query Frame = 0 

Query: 84  FLKTSIASATLAFKASGDSSRCKTSVWSISRSIPVTLAAFSRSNCSTSG 133
           FL+TSIASATLAFKASG SS+CK  VWSI RS+PVTLA  S S+C TSG
Sbjct: 2   FLRTSIASATLAFKASGYSSKCKAFVWSIFRSLPVTLAVVSGSSCLTSG 50

[Close]
BLAST of Sgr020733 vs. NCBI nr
Match: OMO72481.1 (guanine nucleotide exchange factor DBS [Corchorus capsularis])

HSP 1 Score: 61.6 bits (148), Expect = 1.0e-05
Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 0 

Query: 89  IASATLAFKASGDSSRCKTSVWSISRSIPVTLAAFSRSNCSTSGYTHVQN 139
           +ASAT+ FKA G+SS+C+TSVWS SRSIPVT  AFS S+ STSGY   +N
Sbjct: 1   MASATMDFKACGESSKCRTSVWSNSRSIPVTFPAFSCSSSSTSGYRLKKN 50

[Close]
BLAST of Sgr020733 vs. ExPASy TrEMBL
Match: A0A1R3HQR3 (Guanine nucleotide exchange factor DBS OS=Corchorus capsularis OX=210143 GN=CCACVL1_17768 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.9e-06
Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 0 

Query: 89  IASATLAFKASGDSSRCKTSVWSISRSIPVTLAAFSRSNCSTSGYTHVQN 139
           +ASAT+ FKA G+SS+C+TSVWS SRSIPVT  AFS S+ STSGY   +N
Sbjct: 1   MASATMDFKACGESSKCRTSVWSNSRSIPVTFPAFSCSSSSTSGYRLKKN 50

[Close]
BLAST of Sgr020733 vs. ExPASy TrEMBL
Match: A0A0A9L8J7 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.1e-05
Identity = 31/39 (79.49%), Postives = 36/39 (92.31%), Query Frame = 0 

Query: 89  IASATLAFKASGDSSRCKTSVWSISRSIPVTLAAFSRSN 128
           +ASATLA +ASGDSSRC+TSVWSISRS+PVTLAA S S+
Sbjct: 1   MASATLALRASGDSSRCRTSVWSISRSMPVTLAACSCSS 39

The following BLAST results are available for this feature:
BLAST of Sgr020733 vs. NCBI nr
Match NameE-valueIdentityDescription
CAA2964422.11.4e-0775.51Hypothetical predicted protein [Olea europaea subsp. europaea][more]
OMO72481.11.0e-0566.00guanine nucleotide exchange factor DBS [Corchorus capsularis][more]
BLAST of Sgr020733 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr020733 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1R3HQR34.9e-0666.00Guanine nucleotide exchange factor DBS OS=Corchorus capsularis OX=210143 GN=CCAC... [more]
A0A0A9L8J74.1e-0579.49Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
BLAST of Sgr020733 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..70

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr020733.1Sgr020733.1mRNA