Sgr020642 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr020642
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	RNA helicase
Location	tig00153552: 778790 .. 779182 (-)
RNA-Seq Expression	Sgr020642
Synteny	Sgr020642

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAGCAGGGAGAGCCTCTTCATGTCAGTTCCAAAGCGGAGCTGAAGCGAAGAGAGAAGCAGCAGAAGAAGGCCAAGTCTGGAGGCTTCGAGTCCTTCGGCCTCAGTCCCAATGTCTACAGAGGAATCAAGCGCAAGGGCTACAGAGTTCCCACTCCAATTCAGAGGAAAACCATGCCGCTCATACTTTCCGGCGCGGATGTGGTGGCCATGGCACGAACAGGGTCGGGTAAAACTGCTGCTTTTCTGGTGCCTATGTTAGAGCGCCTAAAACAGCACGATCCTCAGGGTGGTGTTAGGGCTCTCATTTTGTCTCCTACAAGGGACTTGGCGCTTCAGACCCTCAAGTTCACCAAGGAACTTGGAAAATTCACGGGTCAGTTCTCTTAA

mRNA sequence

ATGGGGAAGCAGGGAGAGCCTCTTCATGTCAGTTCCAAAGCGGAGCTGAAGCGAAGAGAGAAGCAGCAGAAGAAGGCCAAGTCTGGAGGCTTCGAGTCCTTCGGCCTCAGTCCCAATGTCTACAGAGGAATCAAGCGCAAGGGCTACAGAGTTCCCACTCCAATTCAGAGGAAAACCATGCCGCTCATACTTTCCGGCGCGGATGTGGTGGCCATGGCACGAACAGGGTCGGGTAAAACTGCTGCTTTTCTGGTGCCTATGTTAGAGCGCCTAAAACAGCACGATCCTCAGGGTGGTGTTAGGGCTCTCATTTTGTCTCCTACAAGGGACTTGGCGCTTCAGACCCTCAAGTTCACCAAGGAACTTGGAAAATTCACGGGTCAGTTCTCTTAA

Coding sequence (CDS)

ATGGGGAAGCAGGGAGAGCCTCTTCATGTCAGTTCCAAAGCGGAGCTGAAGCGAAGAGAGAAGCAGCAGAAGAAGGCCAAGTCTGGAGGCTTCGAGTCCTTCGGCCTCAGTCCCAATGTCTACAGAGGAATCAAGCGCAAGGGCTACAGAGTTCCCACTCCAATTCAGAGGAAAACCATGCCGCTCATACTTTCCGGCGCGGATGTGGTGGCCATGGCACGAACAGGGTCGGGTAAAACTGCTGCTTTTCTGGTGCCTATGTTAGAGCGCCTAAAACAGCACGATCCTCAGGGTGGTGTTAGGGCTCTCATTTTGTCTCCTACAAGGGACTTGGCGCTTCAGACCCTCAAGTTCACCAAGGAACTTGGAAAATTCACGGGTCAGTTCTCTTAA

Protein sequence

MGKQGEPLHVSSKAELKRREKQQKKAKSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGADVVAMARTGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTKELGKFTGQFS

Homology

[Close]

BLAST of Sgr020642 vs. NCBI nr
Match: XP_038904137.1 (putative DEAD-box ATP-dependent RNA helicase 29 [Benincasa hispida])

HSP 1 Score: 239.6 bits (610), Expect = 1.5e-59
Identity = 122/126 (96.83%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 1   MGKQGEPLHVSSKAELKRREKQQKKAKSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTM 60
           MGKQ EPLHVSSKAELKR+EKQQKKAKSGGFES GLSPNV+RGIKRKGYRVPTPIQRKTM
Sbjct: 1   MGKQDEPLHVSSKAELKRKEKQQKKAKSGGFESLGLSPNVFRGIKRKGYRVPTPIQRKTM 60

Query: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTK 120
           PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTK
Sbjct: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTK 120

Query: 121 ELGKFT 127
           ELGKFT
Sbjct: 121 ELGKFT 126

[Close]

BLAST of Sgr020642 vs. NCBI nr
Match: XP_022147370.1 (putative DEAD-box ATP-dependent RNA helicase 29 [Momordica charantia] >XP_022147371.1 putative DEAD-box ATP-dependent RNA helicase 29 [Momordica charantia])

HSP 1 Score: 239.2 bits (609), Expect = 2.0e-59
Identity = 122/126 (96.83%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MGKQGEPLHVSSKAELKRREKQQKKAKSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTM 60
           MGKQ EP HVSSKAELKRREKQQKKAKSGGFES GLSPNV+RGIKRKGYRVPTPIQRKTM
Sbjct: 1   MGKQDEPFHVSSKAELKRREKQQKKAKSGGFESLGLSPNVFRGIKRKGYRVPTPIQRKTM 60

Query: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTK 120
           PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTK
Sbjct: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTK 120

Query: 121 ELGKFT 127
           ELGKFT
Sbjct: 121 ELGKFT 126

[Close]

BLAST of Sgr020642 vs. NCBI nr
Match: XP_022942469.1 (putative DEAD-box ATP-dependent RNA helicase 29 isoform X1 [Cucurbita moschata])

HSP 1 Score: 238.4 bits (607), Expect = 3.4e-59
Identity = 122/126 (96.83%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MGKQGEPLHVSSKAELKRREKQQKKAKSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTM 60
           MGKQ EPLHVSSKAELKRREKQQKKAKSGGFES GLSPNVYRGIKRKGYRVPTPIQRKTM
Sbjct: 1   MGKQDEPLHVSSKAELKRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTM 60

Query: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTK 120
           PLILSG DVVAMARTGSGKTAAFLVPMLERLKQH+PQGGVRALILSPTRDLALQTLKFTK
Sbjct: 61  PLILSGNDVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTK 120

Query: 121 ELGKFT 127
           ELGKFT
Sbjct: 121 ELGKFT 126

[Close]

BLAST of Sgr020642 vs. NCBI nr
Match: XP_023537507.1 (putative DEAD-box ATP-dependent RNA helicase 29 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.4 bits (607), Expect = 3.4e-59
Identity = 122/126 (96.83%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MGKQGEPLHVSSKAELKRREKQQKKAKSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTM 60
           MGKQ EPLHVSSKAELKRREKQQKKAKSGGFES GLSPNVYRGIKRKGYRVPTPIQRKTM
Sbjct: 1   MGKQDEPLHVSSKAELKRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTM 60

Query: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTK 120
           PLILSG DVVAMARTGSGKTAAFLVPMLERLKQH+PQGGVRALILSPTRDLALQTLKFTK
Sbjct: 61  PLILSGNDVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTK 120

Query: 121 ELGKFT 127
           ELGKFT
Sbjct: 121 ELGKFT 126

[Close]

BLAST of Sgr020642 vs. NCBI nr
Match: KAG7031303.1 (putative DEAD-box ATP-dependent RNA helicase 29 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 238.4 bits (607), Expect = 3.4e-59
Identity = 122/126 (96.83%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MGKQGEPLHVSSKAELKRREKQQKKAKSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTM 60
           MGKQ EPLHVSSKAELKRREKQQKKAKSGGFES GLSPNVYRGIKRKGYRVPTPIQRKTM
Sbjct: 1   MGKQDEPLHVSSKAELKRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTM 60

Query: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTK 120
           PLILSG DVVAMARTGSGKTAAFLVPMLERLKQH+PQGGVRALILSPTRDLALQTLKFTK
Sbjct: 61  PLILSGNDVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTK 120

Query: 121 ELGKFT 127
           ELGKFT
Sbjct: 121 ELGKFT 126

[Close]

BLAST of Sgr020642 vs. ExPASy Swiss-Prot
Match: O49289 (Putative DEAD-box ATP-dependent RNA helicase 29 OS=Arabidopsis thaliana OX=3702 GN=RH29 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 4.3e-49
Identity = 99/123 (80.49%), Postives = 108/123 (87.80%), Query Frame = 0


Query: 4   QGEPLHVSSKAELKRREKQQKKAKSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTMPLI 63
           +G+   VSS  EL R+EKQ+KK KSGGFES  L PNV+  IK+KGY+VPTPIQRKTMPLI
Sbjct: 3   EGKGFLVSSVTELHRKEKQKKKGKSGGFESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLI 62

Query: 64  LSGADVVAMARTGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTKELG 123
           LSG DVVAMARTGSGKTAAFL+PMLE+LKQH PQGGVRALILSPTRDLA QTLKFTKELG
Sbjct: 63  LSGVDVVAMARTGSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFTKELG 122

Query: 124 KFT 127
           KFT
Sbjct: 123 KFT 125

[Close]

BLAST of Sgr020642 vs. ExPASy Swiss-Prot
Match: A2YV85 (DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_028228 PE=2 SV=2)

HSP 1 Score: 165.2 bits (417), Expect = 4.8e-40
Identity = 79/104 (75.96%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 23  QKKAKSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGADVVAMARTGSGKTAA 82
           +KKAKSGGFES GL   VYRG++ KGYRVPTPIQRK MPLIL+G D+ AMARTGSGKTAA
Sbjct: 43  KKKAKSGGFESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAA 102

Query: 83  FLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTKELGKFT 127
           FLVPM++RL++HD   G+RALILSPTRDLA QTLKF ++LGKFT
Sbjct: 103 FLVPMIQRLRRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFT 146

[Close]

BLAST of Sgr020642 vs. ExPASy Swiss-Prot
Match: Q8TDD1 (ATP-dependent RNA helicase DDX54 OS=Homo sapiens OX=9606 GN=DDX54 PE=1 SV=2)

HSP 1 Score: 164.9 bits (416), Expect = 6.3e-40
Identity = 82/109 (75.23%), Postives = 93/109 (85.32%), Query Frame = 0


Query: 19  REKQQKKAKSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGADVVAMARTGSG 78
           R + +KK KSGGF+S GLS  V++GI +KGY+VPTPIQRKT+P+IL G DVVAMARTGSG
Sbjct: 86  RAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSG 145

Query: 79  KTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTKELGKFTG 128
           KTA FL+PM ERLK H  Q G RALILSPTR+LALQTLKFTKELGKFTG
Sbjct: 146 KTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKFTG 194

[Close]

BLAST of Sgr020642 vs. ExPASy Swiss-Prot
Match: A3BT52 (DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0416100 PE=2 SV=2)

HSP 1 Score: 164.1 bits (414), Expect = 1.1e-39
Identity = 78/104 (75.00%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 23  QKKAKSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGADVVAMARTGSGKTAA 82
           ++KAKSGGFES GL   VYRG++ KGYRVPTPIQRK MPLIL+G D+ AMARTGSGKTAA
Sbjct: 43  KRKAKSGGFESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAA 102

Query: 83  FLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTKELGKFT 127
           FLVPM++RL++HD   G+RALILSPTRDLA QTLKF ++LGKFT
Sbjct: 103 FLVPMIQRLRRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFT 146

[Close]

BLAST of Sgr020642 vs. ExPASy Swiss-Prot
Match: Q8K4L0 (ATP-dependent RNA helicase DDX54 OS=Mus musculus OX=10090 GN=Ddx54 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 9.1e-39
Identity = 80/109 (73.39%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 19  REKQQKKAKSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGADVVAMARTGSG 78
           R + +KK KSGGF+S GLS  V++GI +KGY+VPTPIQRKT+P+IL G DVVAMARTGSG
Sbjct: 85  RAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSG 144

Query: 79  KTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTKELGKFTG 128
           KTA FL+PM ERLK    Q G RALILSPTR+LALQT+KFTKELGKFTG
Sbjct: 145 KTACFLLPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKFTG 193

[Close]

BLAST of Sgr020642 vs. ExPASy TrEMBL
Match: A0A6J1CZZ4 (RNA helicase OS=Momordica charantia OX=3673 GN=LOC111016323 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.7e-60
Identity = 122/126 (96.83%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MGKQGEPLHVSSKAELKRREKQQKKAKSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTM 60
           MGKQ EP HVSSKAELKRREKQQKKAKSGGFES GLSPNV+RGIKRKGYRVPTPIQRKTM
Sbjct: 1   MGKQDEPFHVSSKAELKRREKQQKKAKSGGFESLGLSPNVFRGIKRKGYRVPTPIQRKTM 60

Query: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTK 120
           PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTK
Sbjct: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTK 120

Query: 121 ELGKFT 127
           ELGKFT
Sbjct: 121 ELGKFT 126

[Close]

BLAST of Sgr020642 vs. ExPASy TrEMBL
Match: A0A6J1ILN0 (RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111478139 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.7e-59
Identity = 122/126 (96.83%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MGKQGEPLHVSSKAELKRREKQQKKAKSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTM 60
           MGKQ EPLHVSSKAELKRREKQQKKAKSGGFES GLSPNVYRGIKRKGYRVPTPIQRKTM
Sbjct: 1   MGKQDEPLHVSSKAELKRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTM 60

Query: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTK 120
           PLILSG DVVAMARTGSGKTAAFLVPMLERLKQH+PQGGVRALILSPTRDLALQTLKFTK
Sbjct: 61  PLILSGNDVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTK 120

Query: 121 ELGKFT 127
           ELGKFT
Sbjct: 121 ELGKFT 126

[Close]

BLAST of Sgr020642 vs. ExPASy TrEMBL
Match: A0A6J1INZ1 (RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111478139 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.7e-59
Identity = 122/126 (96.83%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MGKQGEPLHVSSKAELKRREKQQKKAKSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTM 60
           MGKQ EPLHVSSKAELKRREKQQKKAKSGGFES GLSPNVYRGIKRKGYRVPTPIQRKTM
Sbjct: 1   MGKQDEPLHVSSKAELKRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTM 60

Query: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTK 120
           PLILSG DVVAMARTGSGKTAAFLVPMLERLKQH+PQGGVRALILSPTRDLALQTLKFTK
Sbjct: 61  PLILSGNDVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTK 120

Query: 121 ELGKFT 127
           ELGKFT
Sbjct: 121 ELGKFT 126

[Close]

BLAST of Sgr020642 vs. ExPASy TrEMBL
Match: A0A6J1FRF0 (RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111447496 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.7e-59
Identity = 122/126 (96.83%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MGKQGEPLHVSSKAELKRREKQQKKAKSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTM 60
           MGKQ EPLHVSSKAELKRREKQQKKAKSGGFES GLSPNVYRGIKRKGYRVPTPIQRKTM
Sbjct: 1   MGKQDEPLHVSSKAELKRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTM 60

Query: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTK 120
           PLILSG DVVAMARTGSGKTAAFLVPMLERLKQH+PQGGVRALILSPTRDLALQTLKFTK
Sbjct: 61  PLILSGNDVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTK 120

Query: 121 ELGKFT 127
           ELGKFT
Sbjct: 121 ELGKFT 126

[Close]

BLAST of Sgr020642 vs. ExPASy TrEMBL
Match: A0A6J1FWD3 (RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111447496 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.7e-59
Identity = 122/126 (96.83%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MGKQGEPLHVSSKAELKRREKQQKKAKSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTM 60
           MGKQ EPLHVSSKAELKRREKQQKKAKSGGFES GLSPNVYRGIKRKGYRVPTPIQRKTM
Sbjct: 1   MGKQDEPLHVSSKAELKRREKQQKKAKSGGFESLGLSPNVYRGIKRKGYRVPTPIQRKTM 60

Query: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTK 120
           PLILSG DVVAMARTGSGKTAAFLVPMLERLKQH+PQGGVRALILSPTRDLALQTLKFTK
Sbjct: 61  PLILSGNDVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTK 120

Query: 121 ELGKFT 127
           ELGKFT
Sbjct: 121 ELGKFT 126

[Close]

BLAST of Sgr020642 vs. TAIR 10
Match: AT1G77030.1 (hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases )

HSP 1 Score: 195.3 bits (495), Expect = 3.1e-50
Identity = 99/123 (80.49%), Postives = 108/123 (87.80%), Query Frame = 0


Query: 4   QGEPLHVSSKAELKRREKQQKKAKSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTMPLI 63
           +G+   VSS  EL R+EKQ+KK KSGGFES  L PNV+  IK+KGY+VPTPIQRKTMPLI
Sbjct: 3   EGKGFLVSSVTELHRKEKQKKKGKSGGFESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLI 62

Query: 64  LSGADVVAMARTGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTKELG 123
           LSG DVVAMARTGSGKTAAFL+PMLE+LKQH PQGGVRALILSPTRDLA QTLKFTKELG
Sbjct: 63  LSGVDVVAMARTGSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFTKELG 122

Query: 124 KFT 127
           KFT
Sbjct: 123 KFT 125

[Close]

BLAST of Sgr020642 vs. TAIR 10
Match: AT2G45810.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 92.4 bits (228), Expect = 2.8e-19
Identity = 46/100 (46.00%), Postives = 70/100 (70.00%), Query Frame = 0


Query: 27  KSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGADVVAMARTGSGKTAAFLVP 86
           K   FE + L  ++ RGI  KG+  P+PIQ +++P+ L+G+D++A A+ G+GKT AF +P
Sbjct: 152 KGNEFEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIP 211

Query: 87  MLERLKQHDPQGGV-RALILSPTRDLALQTLKFTKELGKF 126
            LE++   DP+  V +A+IL PTR+LALQT +  KEL K+
Sbjct: 212 TLEKI---DPENNVIQAVILVPTRELALQTSQVCKELSKY 248

[Close]

BLAST of Sgr020642 vs. TAIR 10
Match: AT3G61240.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 91.7 bits (226), Expect = 4.8e-19
Identity = 45/100 (45.00%), Postives = 70/100 (70.00%), Query Frame = 0


Query: 27  KSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGADVVAMARTGSGKTAAFLVP 86
           K   FE + L  ++ +GI  KG+  P+PIQ +++P+ L+G+D++A A+ G+GKT AF +P
Sbjct: 122 KGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIP 181

Query: 87  MLERLKQHDPQGGV-RALILSPTRDLALQTLKFTKELGKF 126
           +LE++   DP   V +A+IL PTR+LALQT +  KEL K+
Sbjct: 182 VLEKI---DPNNNVIQAMILVPTRELALQTSQVCKELSKY 218

[Close]

BLAST of Sgr020642 vs. TAIR 10
Match: AT3G61240.2 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 91.7 bits (226), Expect = 4.8e-19
Identity = 45/100 (45.00%), Postives = 70/100 (70.00%), Query Frame = 0


Query: 27  KSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGADVVAMARTGSGKTAAFLVP 86
           K   FE + L  ++ +GI  KG+  P+PIQ +++P+ L+G+D++A A+ G+GKT AF +P
Sbjct: 122 KGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIP 181

Query: 87  MLERLKQHDPQGGV-RALILSPTRDLALQTLKFTKELGKF 126
           +LE++   DP   V +A+IL PTR+LALQT +  KEL K+
Sbjct: 182 VLEKI---DPNNNVIQAMILVPTRELALQTSQVCKELSKY 218

[Close]

BLAST of Sgr020642 vs. TAIR 10
Match: AT4G00660.2 (RNAhelicase-like 8 )

HSP 1 Score: 89.7 bits (221), Expect = 1.8e-18
Identity = 45/110 (40.91%), Postives = 72/110 (65.45%), Query Frame = 0


Query: 15  ELKRREKQQKKAKSGGFESFGLSPNVYRGIKRKGYRVPTPIQRKTMPLILSGADVVAMAR 74
           + + R +     K   FE + L   +  GI  KG+  P+PIQ +++P+ L+G D++A A+
Sbjct: 117 DTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAK 176

Query: 75  TGSGKTAAFLVPMLERLKQHDPQGGVRALILSPTRDLALQTLKFTKELGK 125
            G+GKTAAF +P+LE++ Q +    ++A+I+ PTR+LALQT +  KELGK
Sbjct: 177 NGTGKTAAFCIPVLEKIDQDN--NVIQAVIIVPTRELALQTSQVCKELGK 224

The following BLAST results are available for this feature:

BLAST of Sgr020642 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904137.1	1.5e-59	96.83	putative DEAD-box ATP-dependent RNA helicase 29 [Benincasa hispida]	[more]
XP_022147370.1	2.0e-59	96.83	putative DEAD-box ATP-dependent RNA helicase 29 [Momordica charantia] >XP_022147...	[more]
XP_022942469.1	3.4e-59	96.83	putative DEAD-box ATP-dependent RNA helicase 29 isoform X1 [Cucurbita moschata]	[more]
XP_023537507.1	3.4e-59	96.83	putative DEAD-box ATP-dependent RNA helicase 29 isoform X2 [Cucurbita pepo subsp...	[more]
KAG7031303.1	3.4e-59	96.83	putative DEAD-box ATP-dependent RNA helicase 29 [Cucurbita argyrosperma subsp. a...	[more]

BLAST of Sgr020642 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49289	4.3e-49	80.49	Putative DEAD-box ATP-dependent RNA helicase 29 OS=Arabidopsis thaliana OX=3702 ...	[more]
A2YV85	4.8e-40	75.96	DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]
Q8TDD1	6.3e-40	75.23	ATP-dependent RNA helicase DDX54 OS=Homo sapiens OX=9606 GN=DDX54 PE=1 SV=2	[more]
A3BT52	1.1e-39	75.00	DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q8K4L0	9.1e-39	73.39	ATP-dependent RNA helicase DDX54 OS=Mus musculus OX=10090 GN=Ddx54 PE=1 SV=1	[more]

BLAST of Sgr020642 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CZZ4	9.7e-60	96.83	RNA helicase OS=Momordica charantia OX=3673 GN=LOC111016323 PE=3 SV=1	[more]
A0A6J1ILN0	1.7e-59	96.83	RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111478139 PE=3 SV=1	[more]
A0A6J1INZ1	1.7e-59	96.83	RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111478139 PE=3 SV=1	[more]
A0A6J1FRF0	1.7e-59	96.83	RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111447496 PE=3 SV=1	[more]
A0A6J1FWD3	1.7e-59	96.83	RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111447496 PE=3 SV=1	[more]

BLAST of Sgr020642 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77030.1	3.1e-50	80.49	hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-d...	[more]
AT2G45810.1	2.8e-19	46.00	DEA(D/H)-box RNA helicase family protein	[more]
AT3G61240.1	4.8e-19	45.00	DEA(D/H)-box RNA helicase family protein	[more]
AT3G61240.2	4.8e-19	45.00	DEA(D/H)-box RNA helicase family protein	[more]
AT4G00660.2	1.8e-18	40.91	RNAhelicase-like 8	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 3..129 e-value: 1.4E-36 score: 127.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 24..127
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 53..126 e-value: 2.2E-21 score: 76.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..27
None	No IPR available	PANTHER	PTHR47959:SF8	DEAD-BOX ATP-DEPENDENT RNA HELICASE 29	coord: 4..126
None	No IPR available	PANTHER	PTHR47959	ATP-DEPENDENT RNA HELICASE RHLE-RELATED	coord: 4..126
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 29..57 score: 11.128675
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 60..130 score: 12.558775

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr020642.1	Sgr020642.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0003676	nucleic acid binding