Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAACTTATGCTATCGTCCTCATAACTTGCGGTTCTGTGATAGCCGTTGTGGTAGTTTTGTGTTGTCTTTGTAGATATGGGGGTCGTAAAAAGAAGGAAACAAGAAGACCCATGAGTGTAACTAGTGTTCCAAGGCCACCGGCGCCAAAAACATATCGTGATGTTGAACTTGGACAAGGCACTCGAAGAAGCGAAAACAAGGATGGTGGGATGACCATTTTGGCCGGAGCAGCTGCTGGTTTAGCTACTGCAGCCGTGATCACTAGTTTAAGCAGTGAAGGTGGGGGTGGGGGTGGAGGTGGAGGAGATAGTGGCGGTGGTGATGATGGTGGCGGCGATGGTGGCGGCGGTTGTGGTGGCGGTTGTGGAGGCGGTTGTGGTGGTGGTTGCGGTGGCTGCGGTGGCTGA
mRNA sequence
ATGAAAACTTATGCTATCGTCCTCATAACTTGCGGTTCTGTGATAGCCGTTGTGGTAGTTTTGTGTTGTCTTTGTAGATATGGGGGTCGTAAAAAGAAGGAAACAAGAAGACCCATGAGTGTAACTAGTGTTCCAAGGCCACCGGCGCCAAAAACATATCGTGATGTTGAACTTGGACAAGGCACTCGAAGAAGCGAAAACAAGGATGGTGGGATGACCATTTTGGCCGGAGCAGCTGCTGGTTTAGCTACTGCAGCCGTGATCACTAGTTTAAGCAGTGAAGGTGGGGGTGGGGGTGGAGGTGGAGGAGATAGTGGCGGTGGTGATGATGGTGGCGGCGATGGTGGCGGCGGTTGTGGTGGCGGTTGTGGAGGCGGTTGTGGTGGTGGTTGCGGTGGCTGCGGTGGCTGA
Coding sequence (CDS)
ATGAAAACTTATGCTATCGTCCTCATAACTTGCGGTTCTGTGATAGCCGTTGTGGTAGTTTTGTGTTGTCTTTGTAGATATGGGGGTCGTAAAAAGAAGGAAACAAGAAGACCCATGAGTGTAACTAGTGTTCCAAGGCCACCGGCGCCAAAAACATATCGTGATGTTGAACTTGGACAAGGCACTCGAAGAAGCGAAAACAAGGATGGTGGGATGACCATTTTGGCCGGAGCAGCTGCTGGTTTAGCTACTGCAGCCGTGATCACTAGTTTAAGCAGTGAAGGTGGGGGTGGGGGTGGAGGTGGAGGAGATAGTGGCGGTGGTGATGATGGTGGCGGCGATGGTGGCGGCGGTTGTGGTGGCGGTTGTGGAGGCGGTTGTGGTGGTGGTTGCGGTGGCTGCGGTGGCTGA
Protein sequence
MKTYAIVLITCGSVIAVVVVLCCLCRYGGRKKKETRRPMSVTSVPRPPAPKTYRDVELGQGTRRSENKDGGMTILAGAAAGLATAAVITSLSSEGGGGGGGGGDSGGGDDGGGDGGGGCGGGCGGGCGGGCGGCGG
Homology
BLAST of Sgr020119 vs. NCBI nr
Match:
XP_023552868.1 (glycine-rich protein DOT1-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 125.2 bits (313), Expect = 4.4e-25
Identity = 96/137 (70.07%), Postives = 108/137 (78.83%), Query Frame = 0
Query: 1 MKTYAIVLITCGSVIAVVVVLCCLCRYGGRKKKETRRPMSVTSVPRPPAPKTYRDVELGQ 60
M+TYAIVLITCG VIA V+L C+C YGGRKKK+ P +S R P P+ RD+ELG
Sbjct: 1 MRTYAIVLITCGCVIASAVILWCVCSYGGRKKKKAAPPTYTSSALR-PTPRPSRDLELG- 60
Query: 61 GTRRSENKDGGMTILAGAAAGLATAAVITSLSSEGGGGGGGGGDSGGGDDGGGDGGGGCG 120
E K+GGMTILAGAAAGLATAAV+TSLS++ GGGGGGG+ GGGD GGGDGGGGCG
Sbjct: 61 -----EAKNGGMTILAGAAAGLATAAVVTSLSND--GGGGGGGEEGGGDGGGGDGGGGCG 120
Query: 121 GGCGGGCGGGC-GGCGG 137
GGCGGGCGGGC GGCGG
Sbjct: 121 GGCGGGCGGGCGGGCGG 128
BLAST of Sgr020119 vs. NCBI nr
Match:
XP_022931328.1 (glycine-rich protein 5-like [Cucurbita moschata])
HSP 1 Score: 123.2 bits (308), Expect = 1.7e-24
Identity = 95/137 (69.34%), Postives = 108/137 (78.83%), Query Frame = 0
Query: 1 MKTYAIVLITCGSVIAVVVVLCCLCRYGGRKKKETRRPMSVTSVPRPPAPKTYRDVELGQ 60
M+TYAIVLITCG VIA V+L C+C YGGRKKK+ P +S R P P+ RD+ELG
Sbjct: 1 MRTYAIVLITCGCVIASAVILWCVCSYGGRKKKKAAPPTYTSSALR-PTPRPSRDLELG- 60
Query: 61 GTRRSENKDGGMTILAGAAAGLATAAVITSLSSEGGGGGGGGGDSGGGDDGGGDGGGGCG 120
E K+GGMTILAGAAAGLATAAV+TSL+++ GGGGGGGG+ GGGD GGDGGGGCG
Sbjct: 61 -----EAKNGGMTILAGAAAGLATAAVVTSLTND-GGGGGGGGEEGGGDGSGGDGGGGCG 120
Query: 121 GGCGGGCGGGC-GGCGG 137
GGCGGGCGGGC GGCGG
Sbjct: 121 GGCGGGCGGGCGGGCGG 129
BLAST of Sgr020119 vs. NCBI nr
Match:
XP_022985127.1 (glycine-rich protein 5-like [Cucurbita maxima])
HSP 1 Score: 121.3 bits (303), Expect = 6.4e-24
Identity = 96/137 (70.07%), Postives = 107/137 (78.10%), Query Frame = 0
Query: 1 MKTYAIVLITCGSVIAVVVVLCCLCRYGGRKKKETRRPMSVTSVPRPPAPKTYRDVELGQ 60
M+TYAIVLIT G VIA V+L C+C YGGRKKK+T P +S R P P+ RD+ELG
Sbjct: 1 MRTYAIVLITSGCVIASAVILWCVCSYGGRKKKKTAPPTYTSSALR-PTPRPSRDLELG- 60
Query: 61 GTRRSENKDGGMTILAGAAAGLATAAVITSLSSEGGGGGGGGGDSGGGDDGGGDGGGGCG 120
E K+GGMTILAGAAAGLATAAV+TSLS++GGGGGGGG GG D GGGDGGGGCG
Sbjct: 61 -----EAKNGGMTILAGAAAGLATAAVVTSLSNDGGGGGGGG--EGGDDGGGGDGGGGCG 120
Query: 121 GGCGGGCGGGC-GGCGG 137
GGCGGGCGGGC GGCGG
Sbjct: 121 GGCGGGCGGGCGGGCGG 128
BLAST of Sgr020119 vs. NCBI nr
Match:
KAG6577050.1 (hypothetical protein SDJN03_24624, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 121.3 bits (303), Expect = 6.4e-24
Identity = 92/134 (68.66%), Postives = 105/134 (78.36%), Query Frame = 0
Query: 1 MKTYAIVLITCGSVIAVVVVLCCLCRYGGRKKKETRRPMSVTSVPRPPAPKTYRDVELGQ 60
M+TYAIVLITCG VIA V+L C+C YGGRKKK+ P +S R P P+ RD+ELG
Sbjct: 1 MRTYAIVLITCGCVIASAVILWCVCSYGGRKKKKAAPPTYTSSALR-PTPRPSRDLELG- 60
Query: 61 GTRRSENKDGGMTILAGAAAGLATAAVITSLSSE-GGGGGGGGGDSGGGDDGGGDGGGGC 120
E K+GGMTILAGAAAGLATAAV+TSL+++ GGGGGGGGG+ GGGD GGG GGGC
Sbjct: 61 -----EAKNGGMTILAGAAAGLATAAVVTSLTNDGGGGGGGGGGEEGGGDGGGGGCGGGC 120
Query: 121 GGGCGGGCGGGCGG 134
GGGCGGGCGGGCGG
Sbjct: 121 GGGCGGGCGGGCGG 127
BLAST of Sgr020119 vs. NCBI nr
Match:
KAA8526697.1 (hypothetical protein F0562_008100 [Nyssa sinensis])
HSP 1 Score: 99.4 bits (246), Expect = 2.6e-17
Identity = 87/136 (63.97%), Postives = 92/136 (67.65%), Query Frame = 0
Query: 1 MKTYAIVLITCGSVIAVVVVLCCLCRYGGRKKKETRRPMSVTSVPRPPAPKTYRDVELGQ 60
MK YAI LI CGSV A V+VLCCLC GGRKKK T P SV P + YRDVE G+
Sbjct: 139 MKAYAIALIVCGSVAAAVIVLCCLCN-GGRKKKGTNHPAVRQSVSATPPQQAYRDVERGE 198
Query: 61 GTRRSENKDGGMTILAGAAAGLATAAVITSLSSEGGGGGGGGGDSGGGDDGGGDGGGGCG 120
+ S +DG M ILAGAAA A AAVI S SS GGG GGDSGGG GG GGGGCG
Sbjct: 199 KPKSSGTRDGSMVILAGAAAATAAAAVIVSTSS----GGGCGGDSGGG--GGDGGGGGCG 258
Query: 121 GGCGGGCGGGCGGCGG 137
GGCGGGCGG GGCGG
Sbjct: 259 GGCGGGCGG--GGCGG 265
BLAST of Sgr020119 vs. ExPASy TrEMBL
Match:
A0A6J1EY84 (glycine-rich protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111437551 PE=4 SV=1)
HSP 1 Score: 123.2 bits (308), Expect = 8.1e-25
Identity = 95/137 (69.34%), Postives = 108/137 (78.83%), Query Frame = 0
Query: 1 MKTYAIVLITCGSVIAVVVVLCCLCRYGGRKKKETRRPMSVTSVPRPPAPKTYRDVELGQ 60
M+TYAIVLITCG VIA V+L C+C YGGRKKK+ P +S R P P+ RD+ELG
Sbjct: 1 MRTYAIVLITCGCVIASAVILWCVCSYGGRKKKKAAPPTYTSSALR-PTPRPSRDLELG- 60
Query: 61 GTRRSENKDGGMTILAGAAAGLATAAVITSLSSEGGGGGGGGGDSGGGDDGGGDGGGGCG 120
E K+GGMTILAGAAAGLATAAV+TSL+++ GGGGGGGG+ GGGD GGDGGGGCG
Sbjct: 61 -----EAKNGGMTILAGAAAGLATAAVVTSLTND-GGGGGGGGEEGGGDGSGGDGGGGCG 120
Query: 121 GGCGGGCGGGC-GGCGG 137
GGCGGGCGGGC GGCGG
Sbjct: 121 GGCGGGCGGGCGGGCGG 129
BLAST of Sgr020119 vs. ExPASy TrEMBL
Match:
A0A6J1J409 (glycine-rich protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111483210 PE=4 SV=1)
HSP 1 Score: 121.3 bits (303), Expect = 3.1e-24
Identity = 96/137 (70.07%), Postives = 107/137 (78.10%), Query Frame = 0
Query: 1 MKTYAIVLITCGSVIAVVVVLCCLCRYGGRKKKETRRPMSVTSVPRPPAPKTYRDVELGQ 60
M+TYAIVLIT G VIA V+L C+C YGGRKKK+T P +S R P P+ RD+ELG
Sbjct: 1 MRTYAIVLITSGCVIASAVILWCVCSYGGRKKKKTAPPTYTSSALR-PTPRPSRDLELG- 60
Query: 61 GTRRSENKDGGMTILAGAAAGLATAAVITSLSSEGGGGGGGGGDSGGGDDGGGDGGGGCG 120
E K+GGMTILAGAAAGLATAAV+TSLS++GGGGGGGG GG D GGGDGGGGCG
Sbjct: 61 -----EAKNGGMTILAGAAAGLATAAVVTSLSNDGGGGGGGG--EGGDDGGGGDGGGGCG 120
Query: 121 GGCGGGCGGGC-GGCGG 137
GGCGGGCGGGC GGCGG
Sbjct: 121 GGCGGGCGGGCGGGCGG 128
BLAST of Sgr020119 vs. ExPASy TrEMBL
Match:
A0A5J5AB60 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_008100 PE=4 SV=1)
HSP 1 Score: 99.4 bits (246), Expect = 1.3e-17
Identity = 87/136 (63.97%), Postives = 92/136 (67.65%), Query Frame = 0
Query: 1 MKTYAIVLITCGSVIAVVVVLCCLCRYGGRKKKETRRPMSVTSVPRPPAPKTYRDVELGQ 60
MK YAI LI CGSV A V+VLCCLC GGRKKK T P SV P + YRDVE G+
Sbjct: 139 MKAYAIALIVCGSVAAAVIVLCCLCN-GGRKKKGTNHPAVRQSVSATPPQQAYRDVERGE 198
Query: 61 GTRRSENKDGGMTILAGAAAGLATAAVITSLSSEGGGGGGGGGDSGGGDDGGGDGGGGCG 120
+ S +DG M ILAGAAA A AAVI S SS GGG GGDSGGG GG GGGGCG
Sbjct: 199 KPKSSGTRDGSMVILAGAAAATAAAAVIVSTSS----GGGCGGDSGGG--GGDGGGGGCG 258
Query: 121 GGCGGGCGGGCGGCGG 137
GGCGGGCGG GGCGG
Sbjct: 259 GGCGGGCGG--GGCGG 265
BLAST of Sgr020119 vs. ExPASy TrEMBL
Match:
A0A2P5BBV5 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_252870 PE=4 SV=1)
HSP 1 Score: 92.0 bits (227), Expect = 2.0e-15
Identity = 86/147 (58.50%), Postives = 96/147 (65.31%), Query Frame = 0
Query: 1 MKTYAIVLITCGSVIAVVVVLCCLCRYGGRKKKETRRP----MSVTSVPRPPAPKTY--- 60
MK YAI L+ CGSVIA V++L CLC G KKK+TR P M S P A + Y
Sbjct: 1 MKAYAIALVACGSVIAAVIILVCLCSRGNNKKKQTRTPNPIRMQSLSGTTPSAQRPYPAG 60
Query: 61 RDVELGQGTRRSE-NKDGGMTILAGAAAGLATAAVITSLSSEGGGGGGGGGDSGGGD--- 120
D+E G+GT +S KDGGM ILAGA A L T A + S+SS GGGGGGGG GGGD
Sbjct: 61 PDIERGEGTMKSSGTKDGGMVILAGAGATLVTTAAVASISSGCGGGGGGGGGGGGGDGDA 120
Query: 121 DGGGDGGGGCGGGCGGGCGGGCGGCGG 137
G GDGGGGC GGC GGC GGCGGCGG
Sbjct: 121 GGSGDGGGGC-GGC-GGC-GGCGGCGG 144
BLAST of Sgr020119 vs. ExPASy TrEMBL
Match:
A0A2P5CH37 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_285070 PE=4 SV=1)
HSP 1 Score: 91.3 bits (225), Expect = 3.4e-15
Identity = 83/144 (57.64%), Postives = 96/144 (66.67%), Query Frame = 0
Query: 1 MKTYAIVLITCGSVIAVVVVLCCLCRYGGRKKKETRRP----MSVTSVPRPPAPKTY--- 60
MK YAI L+ CGSVIA V++L CLC G +KK +TR P M S P A + Y
Sbjct: 1 MKAYAIALVACGSVIAAVIILVCLCSRGNKKKMQTRTPNPIRMQSLSGTTPSAQRPYPAG 60
Query: 61 RDVELGQGTRRSE-NKDGGMTILAGAAAGLATAAVITSLSSEGGGGGGGGGDSGGGDDGG 120
D+E G+GT++S KDGGM ILAGA A LAT A + S+SS GGGGGG GD+G G
Sbjct: 61 PDIERGEGTKKSSGTKDGGMVILAGAGAALATTAAVASISSGCGGGGGGDGDAG----SG 120
Query: 121 GDGGGGCGGGCGGGCGGGCGGCGG 137
GDGGGGC GGC GGC GGCGGCGG
Sbjct: 121 GDGGGGC-GGC-GGC-GGCGGCGG 137
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023552868.1 | 4.4e-25 | 70.07 | glycine-rich protein DOT1-like [Cucurbita pepo subsp. pepo] | [more] |
XP_022931328.1 | 1.7e-24 | 69.34 | glycine-rich protein 5-like [Cucurbita moschata] | [more] |
XP_022985127.1 | 6.4e-24 | 70.07 | glycine-rich protein 5-like [Cucurbita maxima] | [more] |
KAG6577050.1 | 6.4e-24 | 68.66 | hypothetical protein SDJN03_24624, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAA8526697.1 | 2.6e-17 | 63.97 | hypothetical protein F0562_008100 [Nyssa sinensis] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1EY84 | 8.1e-25 | 69.34 | glycine-rich protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111437551 PE=4 S... | [more] |
A0A6J1J409 | 3.1e-24 | 70.07 | glycine-rich protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111483210 PE=4 SV=... | [more] |
A0A5J5AB60 | 1.3e-17 | 63.97 | Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_008100 PE=4 SV=1 | [more] |
A0A2P5BBV5 | 2.0e-15 | 58.50 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_252870 PE... | [more] |
A0A2P5CH37 | 3.4e-15 | 57.64 | Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_285070 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |