Sgr020035 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr020035
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description40S ribosomal protein S4
Locationtig00153446: 1222657 .. 1223892 (-)
RNA-Seq ExpressionSgr020035
SyntenySgr020035
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAACGACATGTTTTGGTTGATGGTAAGGTGAGGACAGACAAGACATATCCTGCTGGTTTCATGGGTATGCTTATCTTAAACTTTCTAATTTTACCGTTGTTTGAGTTCCAATATTTATTGAACATTGTACATAAGTGCGACTATTGCACAGTTGTTTGAATAGCTTGTCTAGAGTAATATTTTTCTTTTAGGAATTGGTGGTTGGTTTATGAACCAAATTAGGGTAGGTATGTTGTGTTAATTTGTTTCAATGCTTCGATATGGGCATATTGTCTTCTTTTGGTTCTAGTGCTCCCCCCCGACCCTCCTATTACCTATGACTGCAACCCCTTCTAGTAAGTTGTGTATGGTGTGTTTTCTGGTGCCTTGAGTGTTGGTTTCGTCCTCATTTTGTTGTGGCTTCTTTTTTCCCATTCTTCTTAATGAAAGATGTCTTTTCAATCAACTCTTTTCCCACAAAAAGTATTGTCTGAAATTGGAATGGGGGGAAGAATAGGGAATGCATCTTTAACATTACCTGCCAAATTACCATTTCCAAACAAGATACTCAACATGATATAACCTGATAATATGTTCCAATCATTTGAATGTCTACGGAGGTTATTCTTATAACATGGTACTGATGGGAATTGCTTTGTCTCTTAGTTGCTTAATATTTGTTTTATTATTTTTTATATAGATCTTAAGCATAACTCATCGTTTTATCACGCCTTCCTCTTTAGATGTCATGTCAATTCCCAAAACAAATGAGAATTTCCGGCTTCTTTATGACACAAAAGGTCGATTCCGTCTTCACTCTATCAGAGATGAGGAGGCTGAGGTTAGCTGCTGTTCTTTGATATTGAACTTTGACCTGTTATTTGTTACAATCTTGTTGTATAGAATGTATGCTGTTCAGGATTCAGAGGAAAATAGATGCAACTACAAACAGAGATTTTTGGCATTAATAGTTCATAGGTTTAGTACTTGTCCAGATGGAATTCTGCATTTTTCTTCACGACTTCTTCGAGTTAACTGTTCTTTTTCAAATTATTGTCATGCGAGGTTCATAAAGGGAAATTCATATCCTAATCCTCTGGAGTTACAAGTTTGTTGTTGGTGATGACTTCGATTATTGTTTTTGCAGTATAAGCTCTACAAAGTTCGCTCAGTACAGTTCGGGCAAAAGGGCATCCCTTATCTGAACACTTGCGATGGACGTACAATCCGTTATCCAGACCCTCTGATTAAGGC

mRNA sequence

ATGCAACGACATGTTTTGGTTGATGGTAAGGTGAGGACAGACAAGACATATCCTGCTGGTTTCATGGATGTCATGTCAATTCCCAAAACAAATGAGAATTTCCGGCTTCTTTATGACACAAAAGGTCGATTCCGTCTTCACTCTATCAGAGATGAGGAGGCTGAGTATAAGCTCTACAAAGTTCGCTCAGTACAGTTCGGGCAAAAGGGCATCCCTTATCTGAACACTTGCGATGGACGTACAATCCGTTATCCAGACCCTCTGATTAAGGC

Coding sequence (CDS)

ATGCAACGACATGTTTTGGTTGATGGTAAGGTGAGGACAGACAAGACATATCCTGCTGGTTTCATGGATGTCATGTCAATTCCCAAAACAAATGAGAATTTCCGGCTTCTTTATGACACAAAAGGTCGATTCCGTCTTCACTCTATCAGAGATGAGGAGGCTGAGTATAAGCTCTACAAAGTTCGCTCAGTACAGTTCGGGCAAAAGGGCATCCCTTATCTGAACACTTGCGATGGACGTACAATCCGTTATCCAGACCCTCTGATTAAGGC

Protein sequence

MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYKVRSVQFGQKGIPYLNTCDGRTIRYPDPLIKA
Homology
[Close]
BLAST of Sgr020035 vs. NCBI nr
Match: XP_022132117.1 (40S ribosomal protein S4-3 [Momordica charantia])

HSP 1 Score: 183.7 bits (465), Expect = 7.0e-43
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0 

Query: 1   MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYK 60
           MQRHVLVDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHS+RDEEA+YKL K
Sbjct: 66  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKYKLCK 125

Query: 61  VRSVQFGQKGIPYLNTCDGRTIRYPDPLIKA 92
           VRSVQFGQKGIPYLNT DGRTIRYPDPLIKA
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKA 156

[Close]
BLAST of Sgr020035 vs. NCBI nr
Match: XP_023551057.1 (40S ribosomal protein S4-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.7 bits (465), Expect = 7.0e-43
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0 

Query: 1   MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYK 60
           MQRHVLVDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHS+RDEEA+YKL K
Sbjct: 66  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKYKLCK 125

Query: 61  VRSVQFGQKGIPYLNTCDGRTIRYPDPLIKA 92
           VRSVQFGQKGIPYLNT DGRTIRYPDPLIKA
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKA 156

[Close]
BLAST of Sgr020035 vs. NCBI nr
Match: KAG6600664.1 (putative DEAD-box ATP-dependent RNA helicase 29, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 183.7 bits (465), Expect = 7.0e-43
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0 

Query: 1   MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYK 60
           MQRHVLVDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHS+RDEEA+YKL K
Sbjct: 891 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKYKLCK 950

Query: 61  VRSVQFGQKGIPYLNTCDGRTIRYPDPLIKA 92
           VRSVQFGQKGIPYLNT DGRTIRYPDPLIKA
Sbjct: 951 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKA 981

[Close]
BLAST of Sgr020035 vs. NCBI nr
Match: XP_022942860.1 (40S ribosomal protein S4-3-like [Cucurbita moschata] >XP_022987478.1 40S ribosomal protein S4-3-like [Cucurbita maxima] >KAG7031302.1 40S ribosomal protein S4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 183.7 bits (465), Expect = 7.0e-43
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0 

Query: 1   MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYK 60
           MQRHVLVDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHS+RDEEA+YKL K
Sbjct: 66  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKYKLCK 125

Query: 61  VRSVQFGQKGIPYLNTCDGRTIRYPDPLIKA 92
           VRSVQFGQKGIPYLNT DGRTIRYPDPLIKA
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKA 156

[Close]
BLAST of Sgr020035 vs. NCBI nr
Match: XP_030930364.1 (40S ribosomal protein S4-1 [Quercus lobata])

HSP 1 Score: 182.6 bits (462), Expect = 1.6e-42
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0 

Query: 1   MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYK 60
           MQRHVLVDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHSIRDEEA++KL K
Sbjct: 66  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 125

Query: 61  VRSVQFGQKGIPYLNTCDGRTIRYPDPLIKA 92
           VRSVQFGQKGIPYLNT DGRTIRYPDPLIKA
Sbjct: 126 VRSVQFGQKGIPYLNTFDGRTIRYPDPLIKA 156

[Close]
BLAST of Sgr020035 vs. ExPASy Swiss-Prot
Match: O22424 (40S ribosomal protein S4 OS=Zea mays OX=4577 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 3.8e-44
Identity = 83/91 (91.21%), Postives = 88/91 (96.70%), Query Frame = 0 

Query: 1   MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYK 60
           MQRHVLVDGKVRTDKTYPAGFMDV+SIPKTNEN+RLLYDTKGRFRLH IRDE+A++KL K
Sbjct: 66  MQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAKFKLCK 125

Query: 61  VRSVQFGQKGIPYLNTCDGRTIRYPDPLIKA 92
           VRSVQFGQKGIPYLNT DGRTIRYPDPLIKA
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKA 156

[Close]
BLAST of Sgr020035 vs. ExPASy Swiss-Prot
Match: Q93VH9 (40S ribosomal protein S4-1 OS=Arabidopsis thaliana OX=3702 GN=RPS4A PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.1e-43
Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 1   MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYK 60
           MQRH+ VDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHSI+DEEA++KL K
Sbjct: 66  MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125

Query: 61  VRSVQFGQKGIPYLNTCDGRTIRYPDPLIK 91
           VRS+QFGQKGIPYLNT DGRTIRYPDPLIK
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIK 155

[Close]
BLAST of Sgr020035 vs. ExPASy Swiss-Prot
Match: P49204 (40S ribosomal protein S4-2 OS=Arabidopsis thaliana OX=3702 GN=RPS4B PE=2 SV=4)

HSP 1 Score: 176.8 bits (447), Expect = 1.1e-43
Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 1   MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYK 60
           MQRH+ VDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHSI+DEEA++KL K
Sbjct: 66  MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125

Query: 61  VRSVQFGQKGIPYLNTCDGRTIRYPDPLIK 91
           VRS+QFGQKGIPYLNT DGRTIRYPDPLIK
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIK 155

[Close]
BLAST of Sgr020035 vs. ExPASy Swiss-Prot
Match: Q8VYK6 (40S ribosomal protein S4-3 OS=Arabidopsis thaliana OX=3702 GN=RPS4D PE=2 SV=2)

HSP 1 Score: 176.8 bits (447), Expect = 1.1e-43
Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 1   MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYK 60
           MQRH+ VDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHSI+DEEA++KL K
Sbjct: 66  MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125

Query: 61  VRSVQFGQKGIPYLNTCDGRTIRYPDPLIK 91
           VRS+QFGQKGIPYLNT DGRTIRYPDPLIK
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIK 155

[Close]
BLAST of Sgr020035 vs. ExPASy Swiss-Prot
Match: P46300 (40S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.1e-43
Identity = 82/91 (90.11%), Postives = 88/91 (96.70%), Query Frame = 0 

Query: 1   MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYK 60
           MQR V+VDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHS+RDEE+++KL K
Sbjct: 66  MQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESKFKLCK 125

Query: 61  VRSVQFGQKGIPYLNTCDGRTIRYPDPLIKA 92
           VRSVQFGQKGIPYLNT DGRTIRYPDPLIKA
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKA 156

[Close]
BLAST of Sgr020035 vs. ExPASy TrEMBL
Match: A0A6J1JJJ9 (40S ribosomal protein S4 OS=Cucurbita maxima OX=3661 GN=LOC111485015 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.4e-43
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0 

Query: 1   MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYK 60
           MQRHVLVDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHS+RDEEA+YKL K
Sbjct: 66  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKYKLCK 125

Query: 61  VRSVQFGQKGIPYLNTCDGRTIRYPDPLIKA 92
           VRSVQFGQKGIPYLNT DGRTIRYPDPLIKA
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKA 156

[Close]
BLAST of Sgr020035 vs. ExPASy TrEMBL
Match: A0A6J1BSY6 (40S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111005064 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.4e-43
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0 

Query: 1   MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYK 60
           MQRHVLVDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHS+RDEEA+YKL K
Sbjct: 66  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKYKLCK 125

Query: 61  VRSVQFGQKGIPYLNTCDGRTIRYPDPLIKA 92
           VRSVQFGQKGIPYLNT DGRTIRYPDPLIKA
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKA 156

[Close]
BLAST of Sgr020035 vs. ExPASy TrEMBL
Match: A0A6J1FX18 (40S ribosomal protein S4 OS=Cucurbita moschata OX=3662 GN=LOC111447763 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.4e-43
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0 

Query: 1   MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYK 60
           MQRHVLVDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHS+RDEEA+YKL K
Sbjct: 66  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKYKLCK 125

Query: 61  VRSVQFGQKGIPYLNTCDGRTIRYPDPLIKA 92
           VRSVQFGQKGIPYLNT DGRTIRYPDPLIKA
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKA 156

[Close]
BLAST of Sgr020035 vs. ExPASy TrEMBL
Match: A0A6A1W4B9 (40S ribosomal protein S4 OS=Morella rubra OX=262757 GN=CJ030_MR3G012233 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.5e-43
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0 

Query: 1   MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYK 60
           MQRHVLVDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHSIRDEEA++KL K
Sbjct: 66  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 125

Query: 61  VRSVQFGQKGIPYLNTCDGRTIRYPDPLIKA 92
           VRSVQFGQKGIPYLNT DGRTIRYPDPLIKA
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKA 156

[Close]
BLAST of Sgr020035 vs. ExPASy TrEMBL
Match: A0A7N2MF33 (40S ribosomal protein S4 OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.5e-43
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0 

Query: 1   MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYK 60
           MQRHVLVDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHSIRDEEA++KL K
Sbjct: 66  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 125

Query: 61  VRSVQFGQKGIPYLNTCDGRTIRYPDPLIKA 92
           VRSVQFGQKGIPYLNT DGRTIRYPDPLIKA
Sbjct: 126 VRSVQFGQKGIPYLNTFDGRTIRYPDPLIKA 156

[Close]
BLAST of Sgr020035 vs. TAIR 10
Match: AT2G17360.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 176.8 bits (447), Expect = 7.9e-45
Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 1   MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYK 60
           MQRH+ VDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHSI+DEEA++KL K
Sbjct: 66  MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125

Query: 61  VRSVQFGQKGIPYLNTCDGRTIRYPDPLIK 91
           VRS+QFGQKGIPYLNT DGRTIRYPDPLIK
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIK 155

[Close]
BLAST of Sgr020035 vs. TAIR 10
Match: AT2G17360.2 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 176.8 bits (447), Expect = 7.9e-45
Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 1   MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYK 60
           MQRH+ VDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHSI+DEEA++KL K
Sbjct: 66  MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125

Query: 61  VRSVQFGQKGIPYLNTCDGRTIRYPDPLIK 91
           VRS+QFGQKGIPYLNT DGRTIRYPDPLIK
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIK 155

[Close]
BLAST of Sgr020035 vs. TAIR 10
Match: AT5G58420.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 176.8 bits (447), Expect = 7.9e-45
Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 1   MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYK 60
           MQRH+ VDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHSI+DEEA++KL K
Sbjct: 66  MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125

Query: 61  VRSVQFGQKGIPYLNTCDGRTIRYPDPLIK 91
           VRS+QFGQKGIPYLNT DGRTIRYPDPLIK
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIK 155

[Close]
BLAST of Sgr020035 vs. TAIR 10
Match: AT5G07090.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 176.8 bits (447), Expect = 7.9e-45
Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 1   MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYK 60
           MQRH+ VDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHSI+DEEA++KL K
Sbjct: 66  MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125

Query: 61  VRSVQFGQKGIPYLNTCDGRTIRYPDPLIK 91
           VRS+QFGQKGIPYLNT DGRTIRYPDPLIK
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIK 155

[Close]
BLAST of Sgr020035 vs. TAIR 10
Match: AT5G07090.2 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 176.8 bits (447), Expect = 7.9e-45
Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0 

Query: 1   MQRHVLVDGKVRTDKTYPAGFMDVMSIPKTNENFRLLYDTKGRFRLHSIRDEEAEYKLYK 60
           MQRH+ VDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHSI+DEEA++KL K
Sbjct: 48  MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 107

Query: 61  VRSVQFGQKGIPYLNTCDGRTIRYPDPLIK 91
           VRS+QFGQKGIPYLNT DGRTIRYPDPLIK
Sbjct: 108 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIK 137

The following BLAST results are available for this feature:
BLAST of Sgr020035 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022132117.17.0e-4394.5140S ribosomal protein S4-3 [Momordica charantia][more]
XP_023551057.17.0e-4394.5140S ribosomal protein S4-3-like [Cucurbita pepo subsp. pepo][more]
KAG6600664.17.0e-4394.51putative DEAD-box ATP-dependent RNA helicase 29, partial [Cucurbita argyrosperma... [more]
XP_022942860.17.0e-4394.5140S ribosomal protein S4-3-like [Cucurbita moschata] >XP_022987478.1 40S ribosom... [more]
XP_030930364.11.6e-4294.5140S ribosomal protein S4-1 [Quercus lobata][more]
BLAST of Sgr020035 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O224243.8e-4491.2140S ribosomal protein S4 OS=Zea mays OX=4577 GN=RPS4 PE=2 SV=1[more]
Q93VH91.1e-4390.0040S ribosomal protein S4-1 OS=Arabidopsis thaliana OX=3702 GN=RPS4A PE=2 SV=1[more]
P492041.1e-4390.0040S ribosomal protein S4-2 OS=Arabidopsis thaliana OX=3702 GN=RPS4B PE=2 SV=4[more]
Q8VYK61.1e-4390.0040S ribosomal protein S4-3 OS=Arabidopsis thaliana OX=3702 GN=RPS4D PE=2 SV=2[more]
P463001.1e-4390.1140S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1[more]
BLAST of Sgr020035 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JJJ93.4e-4394.5140S ribosomal protein S4 OS=Cucurbita maxima OX=3661 GN=LOC111485015 PE=3 SV=1[more]
A0A6J1BSY63.4e-4394.5140S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111005064 PE=3 SV=... [more]
A0A6J1FX183.4e-4394.5140S ribosomal protein S4 OS=Cucurbita moschata OX=3662 GN=LOC111447763 PE=3 SV=1[more]
A0A6A1W4B97.5e-4394.5140S ribosomal protein S4 OS=Morella rubra OX=262757 GN=CJ030_MR3G012233 PE=3 SV=... [more]
A0A7N2MF337.5e-4394.5140S ribosomal protein S4 OS=Quercus lobata OX=97700 PE=3 SV=1[more]
BLAST of Sgr020035 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G17360.17.9e-4590.00Ribosomal protein S4 (RPS4A) family protein [more]
AT2G17360.27.9e-4590.00Ribosomal protein S4 (RPS4A) family protein [more]
AT5G58420.17.9e-4590.00Ribosomal protein S4 (RPS4A) family protein [more]
AT5G07090.17.9e-4590.00Ribosomal protein S4 (RPS4A) family protein [more]
AT5G07090.27.9e-4590.00Ribosomal protein S4 (RPS4A) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038237Ribosomal protein S4e, central domain superfamilyGENE3D2.40.50.740coord: 57..91
e-value: 2.0E-18
score: 67.8
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 1..52
e-value: 1.7E-23
score: 84.8
IPR013845Ribosomal protein S4e, central regionPFAMPF00900Ribosomal_S4ecoord: 30..91
e-value: 7.7E-28
score: 96.2
NoneNo IPR availablePANTHERPTHR11581:SF3340S RIBOSOMAL PROTEIN S4coord: 1..91
IPR000876Ribosomal protein S4ePANTHERPTHR1158130S/40S RIBOSOMAL PROTEIN S4coord: 1..91
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 1..47
e-value: 0.0010167
score: 32.6066

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr020035.1Sgr020035.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding