Sgr019877 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr019877
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionUnknown protein
Locationtig00153424: 549556 .. 550106 (-)
RNA-Seq ExpressionSgr019877
SyntenySgr019877
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGGTCAGAACGCTGAATTCGAAAACCATCAAAACCAGCAAGGGTCATATCTGCACGGAGATTGGAACCACGCTTCCAAATCCGGTATGTATCTGATGGAGCGATTCGTCCAATAAATGGAATAACAGAGCTCTCAAAATGAAAAGTCATTTCCATATAAAAATCACATATACGGGCTGCCGAGGCAACAATCTGAGGAAGCCTACGACACCATTTTGCCCAAGCCAGAGGCTGATAGTGCCGTGCAATAATCATAGCTATTGAATCCTCTCTATTGCAAACTGCCTCTTGAAGAGCACTCCAACCATGCTCATTCTGAAGACTCCAATCTGCTCCAGCTGCCATCAAAATCTCAGCAGAAATTGGGTCACAAAGACGTACTGCAAGGTGGAGAGGGGTCTCACGACCTGGGACATCACGCCGGTCAATAACACCAGACACAGCATCAGCTTGCAGCTCTGCTGCAATAGATTCTGCTTCAGTGTTGACCTCACCCGCCCTGGCTAGCCGTGGTAGCATGGAGACAATGAATCTAAGAGCAACATAG

mRNA sequence

ATGTCTGGTCAGAACGCTGAATTCGAAAACCATCAAAACCAGCAAGGGTCATATCTGCACGGAGATTGGAACCACGCTTCCAAATCCGCTGCCATCAAAATCTCAGCAGAAATTGGGTCACAAAGACGTACTGCAAGGTGGAGAGGGGTCTCACGACCTGGGACATCACGCCGGTCAATAACACCAGACACAGCATCAGCTTGCAGCTCTGCTGCAATAGATTCTGCTTCAGTGTTGACCTCACCCGCCCTGGCTAGCCGTGGTAGCATGGAGACAATGAATCTAAGAGCAACATAG

Coding sequence (CDS)

ATGTCTGGTCAGAACGCTGAATTCGAAAACCATCAAAACCAGCAAGGGTCATATCTGCACGGAGATTGGAACCACGCTTCCAAATCCGCTGCCATCAAAATCTCAGCAGAAATTGGGTCACAAAGACGTACTGCAAGGTGGAGAGGGGTCTCACGACCTGGGACATCACGCCGGTCAATAACACCAGACACAGCATCAGCTTGCAGCTCTGCTGCAATAGATTCTGCTTCAGTGTTGACCTCACCCGCCCTGGCTAGCCGTGGTAGCATGGAGACAATGAATCTAAGAGCAACATAG

Protein sequence

MSGQNAEFENHQNQQGSYLHGDWNHASKSAAIKISAEIGSQRRTARWRGVSRPGTSRRSITPDTASACSSAAIDSASVLTSPALASRGSMETMNLRAT
Homology
[Close]
BLAST of Sgr019877 vs. NCBI nr
Match: KAF2537772.1 (hypothetical protein F2Q68_00018795, partial [Brassica cretica])

HSP 1 Score: 65.9 bits (159), Expect = 2.3e-07
Identity = 41/62 (66.13%), Postives = 46/62 (74.19%), Query Frame = 0 

Query: 27  SKSAAIKISAEIGSQRRTARWRGVSRPGTSRRSITPDTASACSSAAIDSASVLTSPALAS 86
           S  A I+ISA+ GS+RRTARWRGVSR GTSRRSIT  T SA  SA  DSAS++TSP L  
Sbjct: 370 SAPADIRISAQTGSRRRTARWRGVSRLGTSRRSITAVTESALDSACNDSASLVTSPGLDK 429

Query: 87  RG 89
            G
Sbjct: 430 VG 431

[Close]
BLAST of Sgr019877 vs. ExPASy TrEMBL
Match: A0A0A9G2W9 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.8e-08
Identity = 40/70 (57.14%), Postives = 51/70 (72.86%), Query Frame = 0 

Query: 23 WNHASKSAAIKISAEIGSQRRTARWRGVSRPGTSRRSITPDTASACSSAAIDSASVLTSP 82
          W+  S  A +++SA  GS+RRTARW GVS  GTSRRS+T +TASA +S A+DS+SV+TSP
Sbjct: 24 WSDQSAPADMRMSAATGSRRRTARWSGVSLRGTSRRSMTAETASARASPAMDSSSVVTSP 83

Query: 83 ALASRGSMET 93
          A   RG   T
Sbjct: 84 ARGRRGRPAT 93

The following BLAST results are available for this feature:
BLAST of Sgr019877 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF2537772.12.3e-0766.13hypothetical protein F2Q68_00018795, partial [Brassica cretica][more]
BLAST of Sgr019877 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr019877 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A9G2W93.8e-0857.14Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
BLAST of Sgr019877 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr019877.1Sgr019877.1mRNA